36 results on '"Anne-Marie, Michon"'
Search Results
2. The Optimization of a Novel, Weak Bromo and Extra Terminal Domain (BET) Bromodomain Fragment Ligand to a Potent and Selective Second Bromodomain (BD2) Inhibitor
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Stephen John Atkinson, Royston C. B. Copley, Matthew J Lindon, Rab K. Prinjha, Alex Preston, James Michael Woolven, Jonathan Thomas Seal, Chun-wa Chung, James Gray, Thomas George Christopher Hayhow, Laurie J. Gordon, Emmanuel Hubert Demont, Aylott Helen Elizabeth, Paola Grandi, Lee Andrew Harrison, Inmaculada Rioja, Robert J. Watson, Simon Taylor, Cassie Messenger, Ian D. Wall, Anne-Marie Michon, Darren Jason Mitchell, and Paul Bamborough
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Male ,Stereochemistry ,Protein domain ,Anti-Inflammatory Agents ,Administration, Oral ,Cell Cycle Proteins ,Molecular Dynamics Simulation ,Crystallography, X-Ray ,Ligands ,Structure-Activity Relationship ,Dogs ,Protein Domains ,In vivo ,Drug Discovery ,Animals ,Humans ,Structure–activity relationship ,Rats, Wistar ,Binding site ,Binding Sites ,Chemistry ,Ligand ,Hydrogen Bonding ,Amides ,Phenotype ,Rats ,Bromodomain ,Molecular Medicine ,Selectivity ,Half-Life ,Transcription Factors - Abstract
The profound efficacy, yet associated toxicity of pan-BET inhibitors is well documented. The possibility of an ameliorated safety profile driven by significantly selective (>100-fold) inhibition of a subset of the eight bromodomains is enticing, but challenging given the close homology. Herein, we describe the X-ray crystal structure-directed optimization of a novel weak fragment ligand with a pan-second bromodomain (BD2) bias, to potent and highly BD2 selective inhibitors. A template hopping approach, enabled by our parallel research into an orthogonal template (15, GSK046), was the basis for the high selectivity observed. This culminated in two tool molecules, 20 (GSK620) and 56 (GSK549), which showed an anti-inflammatory phenotype in human whole blood, confirming their cellular target engagement. Excellent broad selectivity, developability, and in vivo oral pharmacokinetics characterize these tools, which we hope will be of broad utility to the field of epigenetics research.
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- 2020
3. Design and Synthesis of a Highly Selective and In Vivo-Capable Inhibitor of the Second Bromodomain of the Bromodomain and Extra Terminal Domain Family of Proteins
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Peter D. Craggs, Darren Jason Mitchell, Rab K. Prinjha, Alex Preston, James Michael Woolven, Laurie J. Gordon, Simon Taylor, Paul Bamborough, Chun-wa Chung, Paola Grandi, James Gray, Francesco Rianjongdee, Matthew J Lindon, Anne-Marie Michon, Emma J. Jones, Inmaculada Rioja, Robert J. Watson, Ian D. Wall, Stephen John Atkinson, Emmanuel Hubert Demont, and Jonathan Thomas Seal
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0303 health sciences ,Chemistry ,Protein domain ,Highly selective ,01 natural sciences ,Phenotype ,In vitro ,0104 chemical sciences ,Cell biology ,Bromodomain ,010404 medicinal & biomolecular chemistry ,03 medical and health sciences ,In vivo ,Drug Discovery ,Molecular Medicine ,Structure–activity relationship ,Binding site ,030304 developmental biology - Abstract
Pan-bromodomain and extra terminal domain (BET) inhibitors interact equipotently with the eight bromodomains of the BET family of proteins and have shown profound efficacy in a number of in vitro phenotypic assays and in vivo pre-clinical models in inflammation or oncology. A number of these inhibitors have progressed to the clinic where pharmacology-driven adverse events have been reported. To better understand the contribution of each domain to their efficacy and improve their safety profile, selective inhibitors are required. This article discloses the profile of GSK046, also known as iBET-BD2, a highly selective inhibitor of the second bromodomains of the BET proteins that has undergone extensive pre-clinical in vitro and in vivo characterization.
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- 2020
4. GSK973 Is an Inhibitor of the Second Bromodomains (BD2s) of the Bromodomain and Extra-Terminal (BET) Family
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Anne-Marie Michon, Rab K. Prinjha, Alex Preston, Laurie J. Gordon, Inmaculada Rioja, Pierre Thesmar, Emmanuel Hubert Demont, James Michael Woolven, Stephen John Atkinson, Jon T. Seal, Cassie Messenger, Lee Andrew Harrison, Paola Grandi, Darren Jason Mitchell, Robert J. Watson, Simon Taylor, Chun-wa Chung, James Gray, Antonia J. Lewis, Ian D. Wall, Dave Lugo, and Paul Bamborough
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010405 organic chemistry ,business.industry ,Organic Chemistry ,chemical and pharmacologic phenomena ,hemic and immune systems ,Pharmacology ,Highly selective ,01 natural sciences ,Biochemistry ,In vitro ,0104 chemical sciences ,Bromodomain ,010404 medicinal & biomolecular chemistry ,Safety profile ,In vivo ,Drug Discovery ,Medicine ,business - Abstract
[Image: see text] Pan-BET inhibitors have shown profound efficacy in a number of in vivo preclinical models and have entered the clinic in oncology trials where adverse events have been reported. These inhibitors interact equipotently with the eight bromodomains of the BET family of proteins. To better understand the contribution of each domain to their efficacy and to improve from their safety profile, selective inhibitors are required. This Letter discloses the profile of GSK973, a highly selective inhibitor of the second bromodomains of the BET proteins that has undergone extensive preclinical in vitro and in vivo characterization.
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- 2020
5. Identification of a Series of
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Lee A, Harrison, Stephen J, Atkinson, Anna, Bassil, Chun-Wa, Chung, Paola, Grandi, James R J, Gray, Etienne, Levernier, Antonia, Lewis, David, Lugo, Cassie, Messenger, Anne-Marie, Michon, Darren J, Mitchell, Alex, Preston, Rab K, Prinjha, Inmaculada, Rioja, Jonathan T, Seal, Simon, Taylor, Ian D, Wall, Robert J, Watson, James M, Woolven, and Emmanuel H, Demont
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Models, Molecular ,Structure-Activity Relationship ,Dose-Response Relationship, Drug ,Molecular Structure ,Pyridines ,Humans ,Cell Cycle Proteins ,Transcription Factors - Abstract
Domain-specific BET bromodomain ligands represent an attractive target for drug discovery with the potential to unlock the therapeutic benefits of antagonizing these proteins without eliciting the toxicological aspects seen with pan-BET inhibitors. While we have reported several distinct classes of BD2 selective compounds, namely, GSK620, GSK549, and GSK046, only GSK046 shows high aqueous solubility. Herein, we describe the lead optimization of a further class of highly soluble compounds based upon a picolinamide chemotype. Focusing on achieving1000-fold selectivity for BD2 over BD1 ,while retaining favorable physical chemical properties, compound
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- 2021
6. Design and Synthesis of a Highly Selective and
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Alex, Preston, Stephen, Atkinson, Paul, Bamborough, Chun-Wa, Chung, Peter D, Craggs, Laurie, Gordon, Paola, Grandi, James R J, Gray, Emma J, Jones, Matthew, Lindon, Anne-Marie, Michon, Darren J, Mitchell, Rab K, Prinjha, Francesco, Rianjongdee, Inmaculada, Rioja, Jonathan, Seal, Simon, Taylor, Ian, Wall, Robert J, Watson, James, Woolven, and Emmanuel H, Demont
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Binding Sites ,Cell Cycle Proteins ,Molecular Dynamics Simulation ,Crystallography, X-Ray ,Amides ,Rats ,Structure-Activity Relationship ,Protein Domains ,Drug Design ,Benzene Derivatives ,Microsomes, Liver ,Animals ,Humans ,Quantum Theory ,Transcription Factors - Abstract
Pan-bromodomain and extra terminal domain (BET) inhibitors interact equipotently with the eight bromodomains of the BET family of proteins and have shown profound efficacy in a number of
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- 2020
7. Selective targeting of BD1 and BD2 of the BET proteins in cancer and immuno-inflammation
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Peter Ernest Soden, Emma J. Roberts, Danette L. Daniels, Chun-wa Chung, Stephen John Atkinson, Paul Bamborough, Anne Marie Michon, Johanna Vappiani, Andrea C. Haynes, Massimo Petretich, Marcus Bantscheff, Miriam M. Yeung, Matthew J Bell, Sarah-Jane Dawson, Paola Grandi, Dane Vassiliadis, Simon Taylor, James Gray, Omer Gilan, Kathy Knezevic, Marjeta Urh, Matthew J Lindon, Marian L. Burr, Rab K. Prinjha, Alex Preston, Inmaculada Rioja, Mark A. Dawson, Gerard Drewes, Thilo Werner, Christopher Roland Wellaway, Emmanuel Hubert Demont, Anna K. Bassil, Nicola Harker, Thomas Gobbetti, Enid Y.N. Lam, David F. Tough, and Vinod Kumar
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Regulation of gene expression ,Male ,BRD4 ,Multidisciplinary ,Chromatin binding ,HEK 293 cells ,Prostatic Neoplasms ,Proteins ,Biology ,Article ,Chromatin ,Bromodomain ,Protein Domains ,Gene expression ,Cancer research ,Humans ,Transcription factor - Abstract
Bromodomain inhibitors revisited Bromodomain and extraterminal domain (BET) proteins contribute to the pathogenesis of cancer and immune diseases through their effects on transcriptional regulation. BET proteins contain two nearly identical bromodomains, BD1 and BD2, structural modules that have attracted great interest as targets for drug development. First-generation drugs that inhibited both BD1 and BD2 showed promising therapeutic activity in preclinical models but proved to be less efficacious in clinical trials. Gilan et al. took a different approach and designed drugs that selectively inhibited BD1 or BD2 (see the Perspective by Filippakopoulos and Knapp). They found that BD1 and BD2 inhibitors altered gene expression in different ways and that BD2 inhibitors had greater therapeutic activity than BD1 inhibitors in preclinical models of inflammation and autoimmune disease. Science , this issue p. 387 ; see also p. 367
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- 2020
8. A Qualified Success: Discovery of a New Series of ATAD2 Bromodomain Inhibitors with a Novel Binding Mode Using High-Throughput Screening and Hit Qualification
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Andrew D. Roberts, Peter Francis, Paola Grandi, Emma J. Jones, David P. Dixon, Robert J. Watson, Christina Rau, Peter Pogány, Angela Bridges, Chun-wa Chung, Darren Jason Mitchell, Rab K. Prinjha, Peter D. Craggs, Kelly Locke, Emmanuel Hubert Demont, Anne-Marie Michon, Bhumika Karamshi, Rebecca C. Furze, Paul Bamborough, Robert J. Sheppard, Simon C. C. Lucas, and Ana Maria Roa
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Models, Molecular ,0303 health sciences ,Molecular Structure ,Chemistry ,High-throughput screening ,Computational biology ,01 natural sciences ,Biophysical Phenomena ,0104 chemical sciences ,Bromodomain ,High-Throughput Screening Assays ,DNA-Binding Proteins ,Small Molecule Libraries ,010404 medicinal & biomolecular chemistry ,03 medical and health sciences ,Protein Domains ,Catalytic Domain ,Drug Design ,Drug Discovery ,Hit rate ,Molecular Medicine ,ATPases Associated with Diverse Cellular Activities ,Humans ,030304 developmental biology ,Protein Binding - Abstract
The bromodomain of ATAD2 has proved to be one of the least-tractable proteins within this target class. Here, we describe the discovery of a new class of inhibitors by high-throughput screening and show how the difficulties encountered in establishing a screening triage capable of finding progressible hits were overcome by data-driven optimization. Despite the prevalence of nonspecific hits and an exceptionally low progressible hit rate (0.001%), our optimized hit qualification strategy employing orthogonal biophysical methods enabled us to identify a single active series. The compounds have a novel ATAD2 binding mode with noncanonical features including the displacement of all conserved water molecules within the active site and a halogen-bonding interaction. In addition to reporting this new series and preliminary structure-activity relationship, we demonstrate the value of diversity screening to complement the knowledge-based approach used in our previous ATAD2 work. We also exemplify tactics that can increase the chance of success when seeking new chemical starting points for novel and less-tractable targets.
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- 2019
9. A Rasmussen encephalitis, autoimmune encephalitis, and mitochondrial disease mimicker: expanding the DNM1L-associated intractable epilepsy and encephalopathy phenotype
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Danielle A, Nolan, Baibing, Chen, Anne Marie, Michon, Emily, Salatka, and Daniel, Arndt
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Dynamins ,Mitochondrial Proteins ,Drug Resistant Epilepsy ,Autoimmune Diseases of the Nervous System ,Fatal Outcome ,Adolescent ,Disease Progression ,Encephalitis ,Humans ,Female ,Microtubule-Associated Proteins ,GTP Phosphohydrolases - Abstract
Dynamin-1-like protein (DNM1L) gene variants have been linked to childhood refractory epilepsy, developmental delay, encephalopathy, microcephaly, and progressive diffuse cerebral atrophy. However, only a few cases have been reported in the literature and there is still a limited amount of information about the symptomatology and pathophysiology associated with pathogenic variants of DNM1L. We report a 10-year-old girl with a one-year history of mild learning disorder and absence seizures who presented with new-onset focal status epilepticus which progressed to severe encephalopathy and asymmetric hemispheric cerebral atrophy. Differential diagnosis included mitochondrial disease, Rasmussen's encephalitis, and autoimmune encephalitis. Disease progressed from one hemisphere to the other despite anti-seizure medications, hemispherectomy, vagus nerve stimulator, ketogenic diet, and immunomodulators. Continued cerebral atrophy and refractory seizures evolved until death four years after initial presentation. Post-mortem whole-exome sequencing revealed a pathogenic DNM1L variant. This paper presents a novel case of adolescent-onset DNM1L-related intractable epilepsy and encephalopathy.
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- 2019
10. A Chemical Probe for the ATAD2 Bromodomain
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Clement Douault, Tony Kouzarides, Robert J. Sheppard, Hawa Diallo, Paola Grandi, Samuel Robson, Chun-wa Chung, Ka Hing Che, Rab K. Prinjha, Richard J. Upton, Darren Jason Mitchell, Rebecca C. Furze, Emmanuel Hubert Demont, Andrew J. Bannister, Anne-Marie Michon, Robert J. Watson, Christina Rau, Paul Bamborough, Bannister, Andrew [0000-0002-6312-4436], Kouzarides, Tony [0000-0002-8918-4162], and Apollo - University of Cambridge Repository
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0301 basic medicine ,010405 organic chemistry ,Chemistry ,Stereochemistry ,Druggability ,Chemical probe ,General Medicine ,General Chemistry ,01 natural sciences ,Article ,Catalysis ,0104 chemical sciences ,Bromodomain ,Sulfone ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,030104 developmental biology ,030220 oncology & carcinogenesis ,Piperidine ,Bioisostere ,Selectivity - Abstract
ATAD2 is a cancer-associated protein whose bromodomain has been described as among the least druggable of that target class. Starting from a potent lead, permeability and selectivity were improved through a dual approach: 1) using CF(2) as a sulfone bio-isostere to exploit the unique properties of fluorine, and 2) using 1,3-interactions to control the conformation of a piperidine ring. This resulted in the first reported low-nanomolar, selective and cell permeable chemical probe for ATAD2.
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- 2016
11. GSK6853, a Chemical Probe for Inhibition of the BRPF1 Bromodomain
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Laurie J. Gordon, David J. Fallon, Heather A. Barnett, Chun-wa Chung, Darren Jason Mitchell, Emma J. Jones, Robert J. Watson, Rab K. Prinjha, Armelle Le Gall, Isabelle Becher, Paola Grandi, Emmanuel Hubert Demont, Edward Hooper-Greenhill, Peter D. Craggs, Mark J. Bird, Allan J. B. Watson, Hawa Diallo, Robert P. Law, Robert J. Sheppard, Anne-Marie Michon, Dave Lugo, Paul Bamborough, and Clare I. Hobbs
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0301 basic medicine ,Scaffold protein ,biology ,Protein family ,010405 organic chemistry ,Organic Chemistry ,Chemical probe ,Histone acetyltransferase ,01 natural sciences ,Biochemistry ,Molecular biology ,0104 chemical sciences ,Bromodomain ,Cell biology ,03 medical and health sciences ,030104 developmental biology ,Transcription (biology) ,In vivo ,Drug Discovery ,biology.protein ,Epigenetics - Abstract
The BRPF (Bromodomain and PHD Finger-containing) protein family are important scaffolding proteins for assembly of MYST histone acetyltransferase complexes. A selective benzimidazolone BRPF1 inhibitor showing micromolar activity in a cellular target engagement assay was recently described. Herein, we report the optimization of this series leading to the identification of a superior BRPF1 inhibitor suitable for in vivo studies.
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- 2016
12. Discovery of I-BRD9, a selective cell active chemical probe for bromodomain containing protein 9 inhibition
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Laurie J. Gordon, Matthew J Lindon, Nicholas C. O. Tomkinson, Chun-wa Chung, Isabelle Becher, Judit Molnar, Ka Hing Che, Paola Grandi, Andrew J. Bannister, David H. Drewry, Rab K. Prinjha, Antje Dittmann, Tony Kouzarides, Natalie Hope Theodoulou, Rino A. Bit, Philip G. Humphreys, Anne-Marie Michon, Samuel Robson, Gerard Drewes, Melanie Leveridge, and Paul Bamborough
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Models, Molecular ,0301 basic medicine ,Lysine ,Crystallography, X-Ray ,Article ,Cell Line ,Small Molecule Libraries ,03 medical and health sciences ,Protein acylation ,Transcription (biology) ,Drug Discovery ,Humans ,Amino Acid Sequence ,Gene ,Binding Sites ,biology ,Chemistry ,Biomedical Sciences ,Molecular biology ,Bromodomain ,Chromatin ,Cell biology ,Molecular Docking Simulation ,QD450 ,030104 developmental biology ,Histone ,Acetylation ,biology.protein ,Molecular Medicine ,Transcription Factors - Abstract
Acetylation of histone lysine residues is one of the most well-studied post-translational modifications of chromatin, selectively recognized by bromodomain ‘reader’ modules. Inhibitors of the Bromodomain and Extra Terminal domain (BET) family of bromodomains have shown profound anti-cancer and anti-inflammatory properties, generating much interest in targeting other bromodomain-containing proteins for disease treatment. Herein, we report the discovery of I-BRD9, the first selective cellular chemical probe for Bromodomain-containing protein 9 (BRD9). I-BRD9 was identified through structure-based design, leading to greater than 700-fold selectivity over the BET family and 200-fold over the highly homologous Bromodomain-containing protein 7 (BRD7). I-BRD9 was used to identify genes regulated by BRD9 in Kasumi-1 cells involved in oncology and immune response pathways and to the best of our knowledge, represents the first selective tool compound available to elucidate the cellular phenotype of BRD9 bromodomain inhibition.
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- 2016
13. Aiming to Miss a Moving Target: Bromo and Extra Terminal Domain (BET) Selectivity in Constrained ATAD2 Inhibitors
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Rab K. Prinjha, Emmanuel Hubert Demont, Rebecca C. Furze, Chun-wa Chung, Robert J. Sheppard, Robert J. Watson, Heather A. Barnett, Christina Rau, Paul Bamborough, Anne-Marie Michon, Thilo Werner, Paola Grandi, and Darren Jason Mitchell
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0301 basic medicine ,Models, Molecular ,Protein Conformation ,Druggability ,Chemical probe ,Cell Cycle Proteins ,Small Molecule Libraries ,03 medical and health sciences ,chemistry.chemical_compound ,Structure-Activity Relationship ,0302 clinical medicine ,Protein Domains ,Drug Discovery ,Humans ,Molecular Structure ,Nuclear Proteins ,Tropane ,Combinatorial chemistry ,Bromodomain ,DNA-Binding Proteins ,030104 developmental biology ,chemistry ,030220 oncology & carcinogenesis ,Molecular Medicine ,ATPases Associated with Diverse Cellular Activities ,Piperidine ,Selectivity ,Transcription Factors - Abstract
ATAD2 is a cancer-associated protein whose bromodomain has been described as among the least druggable of its class. In our recent disclosure of the first chemical probe against this bromodomain, GSK8814 (6), we described the use of a conformationally constrained methoxy piperidine to gain selectivity over the BET bromodomains. Here we describe an orthogonal conformational restriction strategy of the piperidine ring to give potent and selective tropane inhibitors and show structural insights into why this was more challenging than expected. Greater understanding of why different rational approaches succeeded or failed should help in the future design of selectivity in the bromodomain family.
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- 2018
14. Biological plasticity rescues target activity in CRISPR knock outs
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Maria Fälth Savitski, William F. Mueller, Gerard Joberty, Frederik Ziebell, Marcus Bantscheff, Karen Tessmer, Lars M. Steinmetz, Tilmann Bürckstümmer, Paola Grandi, Anne-Marie Michon, Gerard Drewes, Petra Jakob, Dirk Eberhard, Arne H. Smits, Hanice Sun, Sandra Clauder-Münster, Wolfgang Huber, and Nico Zinn
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DNA (Cytosine-5-)-Methyltransferase 1 ,Cell Cycle Proteins ,Computational biology ,Biology ,medicine.disease_cause ,Biochemistry ,DNA sequencing ,Frameshift mutation ,03 medical and health sciences ,Exon ,Gene Knockout Techniques ,medicine ,CRISPR ,Humans ,Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase ,Molecular Biology ,Gene ,030304 developmental biology ,Translation reinitiation ,0303 health sciences ,Mutation ,Cell Biology ,Exons ,CRISPR-Cas Systems ,Biotechnology ,Transcription Factors - Abstract
Gene knock outs (KOs) are efficiently engineered through CRISPR-Cas9-induced frameshift mutations. While the efficiency of DNA editing is readily verified by DNA sequencing, a systematic understanding of the efficiency of protein elimination has been lacking. Here we devised an experimental strategy combining RNA sequencing and triple-stage mass spectrometry to characterize 193 genetically verified deletions targeting 136 distinct genes generated by CRISPR-induced frameshifts in HAP1 cells. We observed residual protein expression for about one third of the quantified targets, at variable levels from low to original, and identified two causal mechanisms, translation reinitiation leading to N-terminally truncated target proteins or skipping of the edited exon leading to protein isoforms with internal sequence deletions. Detailed analysis of three truncated targets, BRD4, DNMT1 and NGLY1, revealed partial preservation of protein function. Our results imply that systematic characterization of residual protein expression or function in CRISPR-Cas9-generated KO lines is necessary for phenotype interpretation.
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- 2018
15. Structure-Based Optimization of Naphthyridones into Potent ATAD2 Bromodomain Inhibitors
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Emma J. Jones, David P. Dixon, Robert J. Watson, Chun-wa Chung, Anne-Marie Michon, Clement Douault, Emmanuel Hubert Demont, Paul Bamborough, Hawa Diallo, Thilo Werner, Christina Rau, Paola Grandi, Robert J. Sheppard, Rab K. Prinjha, Rebecca C. Furze, Bhumika Karamshi, Darren Jason Mitchell, and Heather A. Barnett
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Adenosine Triphosphatases ,Models, Molecular ,Molecular Structure ,Chemistry ,Stereochemistry ,chemical and pharmacologic phenomena ,hemic and immune systems ,Bromodomain ,DNA-Binding Proteins ,Drug Discovery ,ATPases Associated with Diverse Cellular Activities ,Molecular Medicine ,Structure based ,Naphthyridines ,Selectivity - Abstract
ATAD2 is a bromodomain-containing protein whose overexpression is linked to poor outcomes in a number of different cancer types. To date, no potent and selective inhibitors of the bromodomain have been reported. This article describes the structure-based optimization of a series of naphthyridones from micromolar leads with no selectivity over the BET bromodomains to inhibitors with sub-100 nM ATAD2 potency and 100-fold BET selectivity.
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- 2015
16. Long-term use of levetiracetam to treat tics in children and adolescents with Tourette syndrome
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Anne Marie Michon, Sarah Minarik, and Yasser Awaad
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medicine.medical_specialty ,Pediatrics ,Tics ,business.industry ,medicine.disease ,Tourette syndrome ,Parent ratings ,Safety profile ,School performance ,Pediatrics, Perinatology and Child Health ,medicine ,Clinical Global Impression ,Neurology (clinical) ,Levetiracetam ,Available drugs ,Psychiatry ,business ,medicine.drug - Abstract
Tics are a common disorder in children. Some available drugs have unacceptable side effects, and thus alternative treatments are needed. Levetiracetam is an antiepileptic drug reported to be useful for the treatment of tics. Patients age 18 years and younger with tics and Tourette syndrome were enrolled in this prospective, open-label study. Seventy patients were treated with levetiracetam as monotherapy for four years. The initial dose of levetiracetam was 250 mg/day. The dose was titrated over three weeks to 1,000 to 2,000 mg/day. Clinical outcomes were assessed with the Clinical Global Impression Scale, Yale Global Tic Severity Scale, Revised Conners’ Parent Rating Scale, and Revised Conners’ Teacher Rating Scale. After four years of treatment with levetiracetam, all 70 patients showed some improvements based on the scales used. A total of 49 patients improved with regard to behavior and school performance. Levetiracetam was generally well tolerated. Despite the limitations of open-label studies, these results suggest that levetiracetam may be useful in treating tics in children and adolescents. Given its established safety profile, levetiracetam is a candidate for further study.
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- 2015
17. Levetiracetam in Tourette syndrome: A randomized double blind, placebo controlled study
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Anne Marie Michon, Sarah Minarik, Yasser Awaad, and Tamer Rizk
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Pediatrics ,medicine.medical_specialty ,Tics ,business.industry ,Placebo-controlled study ,Tardive dyskinesia ,medicine.disease ,Placebo ,Tourette syndrome ,law.invention ,Randomized controlled trial ,law ,Pediatrics, Perinatology and Child Health ,medicine ,Clinical Global Impression ,Neurology (clinical) ,Levetiracetam ,Psychiatry ,business ,medicine.drug - Abstract
Some drugs currently used to treat tics have drawbacks, including the risk of side effects such as tardive dyskinesia. Therapeutic options with better safety profiles are needed. Levetiracetam is an antiepileptic drug with atypical GABAergic effects that might be beneficial for this indication. To evaluate the effect of levetiracetam on motor and focal tics, behavior, and school performance in children and adolescents with tics and Tourette syndrome. Twenty-four patients, age 6–18 years, with tics and Tourette syndrome were enrolled in this prospective, double-blinded placebo randomized study for 8 weeks. Each group had 12 patients. The initial starting dose of levetiracetam was 250 mg. The dosage was titrated over 3 weeks to 1,000 to 2,000 mg. Clinical outcomes were assessed with the Clinical Global Impression Scale, Yale Global Tic Severity Scale, and Revised Conners’ Scale. Ten out of 12 patients in the levetiracetam group showed improvements based on all of the scales used and four patients improved with regard to behavior and school performance. Two patients dropped out. Nine patients out of 12 patients in the placebo group showed no improvement, one patient showed a great placebo effect, and two patients dropped out of the study. Levetiracetam was generally well tolerated. Two patients discontinued because of exaggeration of pre-existing behavioral problems. Levetiracetam may be useful in treating tics in children and adolescents. Given its established safety profile, levetiracetam is a candidate for additional evaluation.
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- 2015
18. High dose of botulinum toxin type-A (BTX/A): safety and efficacy in patients with cerebral palsy
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Sherif Soliman, Ronald Thomas, Hassan Tayem, Yasser Awaad, Sharon Munoz, Anne Marie Michon, and Sarah Minarik
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medicine.medical_specialty ,education.field_of_study ,Neurology ,business.industry ,Modified Ashworth scale ,Incidence (epidemiology) ,Diplegia ,Population ,medicine.disease ,Botulinum toxin ,Cerebral palsy ,Anesthesia ,Pediatrics, Perinatology and Child Health ,medicine ,Neurology (clinical) ,Spasticity ,medicine.symptom ,business ,education ,medicine.drug - Abstract
Cerebral palsy (CP) is a severely debilitating condition. The underlying insult results in irreversible damage to the central nervous system, treatment is essentially palliative. Botulinum toxin type-A (BTX/A) Botox® Allergan, Inc. injections have been found to be effective palliation for dynamic spasticity in CP. There is a paucity of data regarding the maximum dose tolerated in the pediatric population. The present study examines the safety and efficacy of BTX/A therapy at up to 40 U/kg. Twenty-two patients were treated from 1995 to 1999. The population included four adults and 18 pediatric patients. Patients were in three groups: diplegia (n=12), hemiplegia (n=5), and quadriplegia (n=5). They were evaluated by the Modified Ashworth Scale. The incidence and severity of complications is also reported. The significance of these data is also commented upon. This study suggests that BTX/A therapy is safe, efficacious, and cost effective at higher doses, and should be considered as part of a comprehensive therapeutic regimen in appropriate candidates. (J Pediatr Neurol 2004; 2(2): 91-96).
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- 2015
19. Use of zonisamide in twelve patients with intractable seizures refractory to common anti-epileptic regimens
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Sarah Minarik, Anne Marie Michon, and Yasser Awaad
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medicine.diagnostic_test ,Every Three Months ,business.industry ,Zonisamide ,Electroencephalography ,Prodrome ,Refractory ,Anesthesia ,Pediatrics, Perinatology and Child Health ,medicine ,Etiology ,Neurology (clinical) ,business ,Intractable seizures ,medicine.drug ,Subclinical infection - Abstract
This non-randomized, uncontrolled, single-center study was conducted to evaluate the effects of zonisamide on intractable epilepsy in a primarily pediatric population. Twelve patients ranging in age from 18 months to 23 years were included in the study. All patients were diagnosed with intractable seizures. Adjunctive therapy with zonisamide was initiated at 100 mg once a day and increased, if needed, by 50-100 mg after one week to reach the maximal or therapeutic dosage depending on patient age and weight. Follow-up occurred in person or by phone at two weeks, one month, and every three months. All 12 patients responded favorably to adjunctive zonisamide. Five patients had subclinical status interrupted and stopped as evidenced by clinical examinations and electroencephalographic (EEG) findings. These patients also became awake, alert, more attentive, and more interactive. An additional six patients experienced clinical and EEG improvement in their seizure frequency, duration, and severity. One patient with autonomic seizures showed EEG improvement in seizure frequency, duration, and severity; however, seizure prodrome control was not obtained. Adjunctive therapy with zonisamide benefited all patients in this study, despite the variation in symptoms and etiology. Zonisamide is thought to have multiple mechanisms of action, which may benefit more patient types than antiepileptic drugs with a single mechanism of action. Zonisamide was well tolerated by all patients.
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- 2015
20. 1,3-Dimethyl Benzimidazolones Are Potent, Selective Inhibitors of the BRPF1 Bromodomain
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Emmanuel Hubert Demont, Robert J. Sheppard, Paola Grandi, Clare I. Hobbs, Chun-wa Chung, Peter D. Craggs, Jameed Hussain, Darren Jason Mitchell, Laurie J. Gordon, Paul Bamborough, Armelle Le Gall, David J. Fallon, Andrew D. Roberts, Rab K. Prinjha, Emma J. Jones, Robert J. Watson, and Anne-Marie Michon
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Scaffold protein ,Protein family ,biology ,Chemistry ,Organic Chemistry ,Chemical probe ,Histone acetyltransferase ,Biochemistry ,Bromodomain ,body regions ,Transcription (biology) ,Drug Discovery ,Cancer research ,biology.protein ,Epigenetics - Abstract
The BRPF (bromodomain and PHD finger-containing) protein family are important scaffolding proteins for assembly of MYST histone acetyltransferase complexes. Here, we report the discovery, binding mode, and structure-activity relationship (SAR) of the first potent, selective series of inhibitors of the BRPF1 bromodomain.
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- 2014
21. Discovery of a Potent, Cell Penetrant, and Selective p300/CBP-Associated Factor (PCAF)/General Control Nonderepressible 5 (GCN5) Bromodomain Chemical Probe
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Laurie J. Gordon, Paola Grandi, Chun-wa Chung, Katherine Louise Jones, Colin J. Suckling, Jameed Hussain, Matthew J Lindon, David F. Tough, Philip G. Humphreys, Thomas George Christopher Hayhow, Jessica F. Renaux, Paul Bamborough, Peter D. Craggs, Rab K. Prinjha, and Anne-Marie Michon
- Subjects
0301 basic medicine ,Cell Membrane Permeability ,Protein domain ,Cell ,01 natural sciences ,03 medical and health sciences ,Mice ,Structure-Activity Relationship ,Piperidines ,Protein Domains ,Transcription (biology) ,Drug Discovery ,medicine ,Structure–activity relationship ,Animals ,Humans ,p300-CBP Transcription Factors ,CREB-binding protein ,Histone Acetyltransferases ,biology ,010405 organic chemistry ,Chemistry ,Membranes, Artificial ,Stereoisomerism ,0104 chemical sciences ,Cell biology ,Bromodomain ,Pyridazines ,enzymes and coenzymes (carbohydrates) ,030104 developmental biology ,medicine.anatomical_structure ,PCAF ,Biochemistry ,Viral replication ,Molecular Probes ,biology.protein ,Molecular Medicine - Abstract
p300/CREB binding protein associated factor (PCAF/KAT2B) and general control nonderepressible 5 (GCN5/KAT2A) are multidomain proteins that have been implicated in retroviral infection, inflammation pathways, and cancer development. However, outside of viral replication, little is known about the dependence of these effects on the C-terminal bromodomain. Herein, we report GSK4027 as a chemical probe for the PCAF/GCN5 bromodomain, together with GSK4028 as an enantiomeric negative control. The probe was optimized from a weakly potent, nonselective pyridazinone hit to deliver high potency for the PCAF/GCN5 bromodomain, high solubility, cellular target engagement, and ≥18000-fold selectivity over the BET family, together with ≥70-fold selectivity over the wider bromodomain families.
- Published
- 2016
22. Fragment-Based Discovery of Low-Micromolar ATAD2 Bromodomain Inhibitors
- Author
-
Andrew D. Roberts, Bhumika Karamshi, Angela Bridges, Hawa Diallo, Chun-wa Chung, Kelly Locke, Peter D. Craggs, Darren Jason Mitchell, Paul Bamborough, Amanda Emmons, Christopher Roland Wellaway, Emma J. Jones, David P. Dixon, Robert J. Watson, Nathalie Barrett, Emmanuel Hubert Demont, Clement Douault, Robert J. Sheppard, Rab K. Prinjha, Rebecca C. Furze, Anne-Marie Michon, Paola Grandi, and Bernadette Mouzon
- Subjects
Adenosine Triphosphatases ,Models, Molecular ,biology ,Chemistry ,Drug discovery ,ATPase ,Molecular Sequence Data ,Cancer ,Antineoplastic Agents ,Quinolones ,medicine.disease ,Bromodomain ,Protein Structure, Tertiary ,Protein structure ,Biochemistry ,Disease severity ,Drug Discovery ,medicine ,biology.protein ,Cancer research ,Molecular Medicine ,Humans ,Amino Acid Sequence ,Enzyme Inhibitors ,Peptide sequence - Abstract
Overexpression of ATAD2 (ATPase family, AAA domain containing 2) has been linked to disease severity and progression in a wide range of cancers, and is implicated in the regulation of several drivers of cancer growth. Little is known of the dependence of these effects upon the ATAD2 bromodomain, which has been categorized as among the least tractable of its class. The absence of any potent, selective inhibitors limits clear understanding of the therapeutic potential of the bromodomain. Here, we describe the discovery of a hit from a fragment-based targeted array. Optimization of this produced the first known micromolar inhibitors of the ATAD2 bromodomain.
- Published
- 2015
23. Functional Assessment Following Intrathecal Baclofen Therapy in Children With Spastic Cerebral Palsy
- Author
-
Steven D. Ham, Hassan Tayem, Sharon Munoz, Anne Marie Michon, Rania Awaad, and Yasser Awaad
- Subjects
Adult ,Male ,Baclofen ,medicine.medical_specialty ,Activities of daily living ,Adolescent ,medicine.medical_treatment ,Cerebral palsy ,Disability Evaluation ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Spastic cerebral palsy ,030225 pediatrics ,Activities of Daily Living ,medicine ,Humans ,Combined Modality Therapy ,Child ,Injections, Spinal ,Physical Therapy Modalities ,Neurologic Examination ,Rehabilitation ,business.industry ,Cerebral Palsy ,Infusion Pumps, Implantable ,medicine.disease ,Intrathecal baclofen ,Clinical trial ,Outcome and Process Assessment, Health Care ,chemistry ,Muscle Spasticity ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Physical therapy ,Female ,Neurology (clinical) ,business ,030217 neurology & neurosurgery - Abstract
The purpose of this article is to describe outcomes of intrathecal baclofen therapy for 29 patients with cerebral palsy, focusing on impairments, functional limitations, and disability. Patients received individualized rehabilitation and were followed up to 24 months. The primary outcome measures were the Ashworth Scale and the functional skills and caregiver assistance scales of the Pediatric Evaluation of Disability Inventory (PEDI). Ashworth Scale scores were significantly reduced ( P .0005). All areas of functional skills and caregiver assistance improved. Comparing groups of adults and patients less than 18 years, there were no significant differences, but there was a relationship between age and dose. Comparing groups of patients in high and low levels of independent functional mobility, no significant differences were found. These results provide suggestive evidence that the combination of intrathecal baclofen therapy and rehabilitation has positive effects across the dimensions of disablement. This study serves as a basis for high-level scientific studies of these effects. ( J Child Neurol 2003; 18: 26—34).
- Published
- 2003
24. Chemoproteomics profiling of HDAC inhibitors reveals selective targeting of HDAC complexes
- Author
-
Isabelle Becher, Valerie Reader, Giovanna Bergamini, Gavain Sweetman, Carola Huthmacher, Nigel Ramsden, Katja Strunk, Dirk Eberhard, Markus Boesche, Antje Dittmann, Marcus Bantscheff, Mikhail M. Savitski, Ulrich Kruse, Daniel Poeckel, Birgit Dümpelfeld, Gitte Neubauer, Judith Schlegl, Anne-Marie Michon, Gerard Drewes, Paola Grandi, Toby Mathieson, Carsten Hopf, Yann Abraham, and Manja Delling
- Subjects
Proteomics ,SIN3 Complex ,medicine.drug_class ,Chemistry ,HDAC10 ,Histone deacetylase inhibitor ,Biomedical Engineering ,Bioengineering ,HDAC6 ,Applied Microbiology and Biotechnology ,Small molecule ,Peptide Mapping ,Histone Deacetylases ,Mass Spectrometry ,Biochemistry ,Protein Interaction Mapping ,medicine ,Molecular Medicine ,Chemoproteomics ,Histone deacetylase ,Mitosis ,Biotechnology - Abstract
The development of selective histone deacetylase (HDAC) inhibitors with anti-cancer and anti-inflammatory properties remains challenging in large part owing to the difficulty of probing the interaction of small molecules with megadalton protein complexes. A combination of affinity capture and quantitative mass spectrometry revealed the selectivity with which 16 HDAC inhibitors target multiple HDAC complexes scaffolded by ELM-SANT domain subunits, including a novel mitotic deacetylase complex (MiDAC). Inhibitors clustered according to their target profiles with stronger binding of aminobenzamides to the HDAC NCoR complex than to the HDAC Sin3 complex. We identified several non-HDAC targets for hydroxamate inhibitors. HDAC inhibitors with distinct profiles have correspondingly different effects on downstream targets. We also identified the anti-inflammatory drug bufexamac as a class IIb (HDAC6, HDAC10) HDAC inhibitor. Our approach enables the discovery of novel targets and inhibitors and suggests that the selectivity of HDAC inhibitors should be evaluated in the context of HDAC complexes and not purified catalytic subunits.
- Published
- 2010
25. Structure and assembly of calf hoof keratin filaments
- Author
-
Zehra Sayers, Anne-Marie Michon, Michel H. J. Koch, and Pilar Sicre
- Subjects
Hoof and Claw ,Hoof ,Analytical chemistry ,macromolecular substances ,law.invention ,Protein filament ,X-Ray Diffraction ,Structural Biology ,law ,Keratin ,Scanning transmission electron microscopy ,Stratum corneum ,medicine ,Animals ,Electrophoresis, Gel, Two-Dimensional ,Intermediate filament ,chemistry.chemical_classification ,Keratin Filament ,integumentary system ,Chromatography, Ion Exchange ,Microscopy, Electron ,medicine.anatomical_structure ,chemistry ,Biophysics ,Keratins ,Cattle ,Electrophoresis, Polyacrylamide Gel ,Electron microscope - Abstract
Keratin filament polypeptides were purified from calf hoof stratum corneum with the aim of studying the in vitro assembly process and determining structural parameters of reconstituted filaments. Anion exchange chromatography was used to obtain the most complete fractionation and identification of the acidic and basic components in the purified polypeptide mixture to date. The reassembly products of the fractionated components were investigated by electron microscopy. Fully reconstituted filaments yield homogeneous solutions, and values of 9.8 nm for the filament diameter and 25 kDa/nm for the mass per unit length (M/L) were obtained by X-ray solution scattering. The structures formed in solution at various stages of filament assembly were not sufficiently homogeneous to be studied by this technique. X-ray diffraction patterns from native stratum corneum display strong maxima at 3.6 and 5.4 nm. Contrary to previous reports, these maxima do not appear to be due to lipids since they are also observed with delipidated rehydrated specimens. A series of weak maxima is also detected in the patterns of dry tissue. The absence of these features in the patterns of reconstituted filaments suggests that, in contrast to some electron microscopic observations, there are no prominent regularities in the structure of calf hoof keratin filaments.
- Published
- 1990
26. Proteome survey reveals modularity of the yeast cell machinery
- Author
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Paola Grandi, Georg Casari, Roland Krause, Marie-Anne Heurtier, Lars Juhl Jensen, Anne-Marie Michon, Gerard Drewes, Martina Marzioch, Angela Edelmann, Andreas Bauer, Christian Hoefert, Christina Rau, Verena Hoffman, Tatjana Rudi, Marita Remor, Giulio Superti-Furga, Karin Klein, Bernhard Kuster, Tewis Bouwmeester, Patrick Aloy, Robert B. Russell, Manuela Hudak, Sonja Bastuck, Birgit Dümpelfeld, Jens Rick, Markus Schirle, Markus Boesche, Peer Bork, Sean D. Hooper, Malgorzata Schelder, Gitte Neubauer, and Anne-Claude Gavin
- Subjects
Proteomics ,Biological data ,Saccharomyces cerevisiae Proteins ,Multidisciplinary ,Proteome ,Systems biology ,Saccharomyces cerevisiae ,Computational biology ,Biology ,biology.organism_classification ,Cell biology ,Open Reading Frames ,Phenotype ,Protein structure ,Structural biology ,Multiprotein Complexes ,ddc:610 ,Genome, Fungal ,Functional genomics - Abstract
Protein complexes are key molecular entities that integrate multiple gene products to perform cellular functions. Here we report the first genome-wide screen for complexes in an organism, budding yeast, using affinity purification and mass spectrometry. Through systematic tagging of open reading frames (ORFs), the majority of complexes were purified several times, suggesting screen saturation. The richness of the data set enabled a de novo characterization of the composition and organization of the cellular machinery. The ensemble of cellular proteins partitions into 491 complexes, of which 257 are novel, that differentially combine with additional attachment proteins or protein modules to enable a diversification of potential functions. Support for this modular organization of the proteome comes from integration with available data on expression, localization, function, evolutionary conservation, protein structure and binary interactions. This study provides the largest collection of physically determined eukaryotic cellular machines so far and a platform for biological data integration and modelling.
- Published
- 2006
27. Use of levetiracetam to treat tics in children and adolescents with Tourette syndrome
- Author
-
Yasser Awaad, Anne Marie Michon, and Sarah Minarik
- Subjects
Male ,medicine.medical_specialty ,Pediatrics ,Levetiracetam ,Tics ,Adolescent ,Neurological disorder ,Tourette syndrome ,Severity of Illness Index ,Severity of illness ,medicine ,Humans ,Prospective Studies ,Psychiatry ,Prospective cohort study ,Child ,Demography ,Psychiatric Status Rating Scales ,Dose-Response Relationship, Drug ,medicine.disease ,Piracetam ,Clinical trial ,Treatment Outcome ,Neurology ,Clinical Global Impression ,Educational Status ,Anticonvulsants ,Female ,Neurology (clinical) ,Psychology ,medicine.drug ,Tourette Syndrome - Abstract
Some drugs currently used to treat tics in pediatric patients have drawbacks, including the risk of side effects. New therapeutic options with better safety profiles are needed. Levetiracetam is an antiepileptic drug with atypical mechanisms of action that might be beneficial for this indication. We evaluated the effects of levetiracetam on motor and vocal tics, behavior, and school performance in children and adolescents with tics and Tourette syndrome (TS). Sixty patients, < or =18 years of age, with tics and TS were enrolled in this prospective, open-label study. The initial starting dose of levetiracetam was 250 mg/day. The dosage was titrated over 3 weeks to 1,000 to 2,000 mg/day. Clinical outcomes were assessed with the Clinical Global Impression Scale, Yale Global Tic Severity Scale, and Revised Conners' Parent Rating Scale. Behavior and school performance were also recorded. All 60 patients showed improvements based on all of the scales used, and 43 patients improved with regard to behavior and school performance. Levetiracetam was generally well tolerated. Three patients discontinued treatment because of exaggeration of preexisting behavioral problems. Levetiracetam may be useful in treating tics in children and adolescents. Given its established safety profile, levetiracetam is a candidate for evaluation in a well-controlled trial.
- Published
- 2005
28. A physical and functional map of the human TNF-α/NF-κB signal transduction pathway
- Author
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Bettina Huhse, Heinz Ruffner, Judith Schlegl, Karen Croughton, Anne-Claude Gavin, Martin Stein, Jens Rick, Georg Casari, Markus Schirle, Tewis Bouwmeester, Sonja Ghidelli, Bernhard Kuster, David B. Jackson, Gitte Neubauer, Giulio Superti-Furga, Raffaella Mangano, Giovanna Bergamini, Gerard Joberty, Dirk Eberhard, Markus Schwab, Angela Bauch, Pierre-Olivier Angrand, Julien Gagneur, Cristina Cruciat, Carsten Hopf, Anne-Marie Michon, Gerard Drewes, and Andreas Bauer
- Subjects
Chaperonins ,Proteome ,Macromolecular Substances ,medicine.medical_treatment ,Cell Cycle Proteins ,MAP Kinase Kinase Kinase 3 ,Biology ,Models, Biological ,Chromatography, Affinity ,Mass Spectrometry ,Receptors, Tumor Necrosis Factor ,Cell Line ,Tacrolimus Binding Proteins ,Enzyme activator ,RNA interference ,Interaction network ,medicine ,Animals ,Drosophila Proteins ,Humans ,HSP90 Heat-Shock Proteins ,ddc:612 ,Transcription factor ,Tandem affinity purification ,Tumor Necrosis Factor-alpha ,Tumor Suppressor Proteins ,NF-kappa B ,Cell Biology ,NFKB1 ,MAP Kinase Kinase Kinases ,Cell biology ,Enzyme Activation ,Cytokine ,I-kappa B Proteins ,RNA Interference ,Signal transduction ,Carrier Proteins ,Molecular Chaperones ,Signal Transduction - Abstract
Signal transduction pathways are modular composites of functionally interdependent sets of proteins that act in a coordinated fashion to transform environmental information into a phenotypic response. The pro-inflammatory cytokine tumour necrosis factor (TNF)-alpha triggers a signalling cascade, converging on the activation of the transcription factor NF-kappa B, which forms the basis for numerous physiological and pathological processes. Here we report the mapping of a protein interaction network around 32 known and candidate TNF-alpha/NF-kappa B pathway components by using an integrated approach comprising tandem affinity purification, liquid-chromatography tandem mass spectrometry, network analysis and directed functional perturbation studies using RNA interference. We identified 221 molecular associations and 80 previously unknown interactors, including 10 new functional modulators of the pathway. This systems approach provides significant insight into the logic of the TNF-alpha/NF-kappa B pathway and is generally applicable to other pathways relevant to human disease.
- Published
- 2004
29. Functional organization of the yeast proteome by systematic analysis of protein complexes
- Author
-
Angela Bauch, Tatjana Rudi, Bettina Huhse, Heinz Ruffner, Bernhard Kuster, Giulio Superti-Furga, Markus Bösche, Volker Gnau, Richard R. Copley, Bertrand Séraphin, Christina Leutwein, David Dickson, Jörg Schultz, Angela Edelmann, Malgorzata Schelder, Karin Klein, Roland Krause, Vladimir Rybin, Tewis Bouwmeester, Erich Querfurth, Gitte Neubauer, Martina Marzioch, Sonja Bastuck, Miro Brajenovic, Manfred Raida, Marie-Anne Heurtier, Manuela Hudak, Christian Höfert, Jens Rick, Anne-Claude Gavin, Anne-Marie Michon, Marita Remor, Gerard Drewes, Andreas Bauer, Alejandro Merino, Paola Grandi, Peer Bork, and Cristina-Maria Cruciat
- Subjects
Saccharomyces cerevisiae Proteins ,Proteome ,Macromolecular Substances ,Recombinant Fusion Proteins ,Saccharomyces cerevisiae ,Context (language use) ,Sensitivity and Specificity ,Chromatography, Affinity ,Species Specificity ,Humans ,Human Protein Reference Database ,ddc:612 ,Cells, Cultured ,Tandem affinity purification ,Multidisciplinary ,biology ,Synthetic genetic array ,biology.organism_classification ,TRAPP complex ,Biochemistry ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Gene Targeting ,biology.protein ,Protein–protein interaction prediction - Abstract
Most cellular processes are carried out by multiprotein complexes. The identification and analysis of their components provides insight into how the ensemble of expressed proteins (proteome) is organized into functional units. We used tandem-affinity purification (TAP) and mass spectrometry in a large-scale approach to characterize multiprotein complexes in Saccharomyces cerevisiae. We processed 1,739 genes, including 1,143 human orthologues of relevance to human biology, and purified 589 protein assemblies. Bioinformatic analysis of these assemblies defined 232 distinct multiprotein complexes and proposed new cellular roles for 344 proteins, including 231 proteins with no previous functional annotation. Comparison of yeast and human complexes showed that conservation across species extends from single proteins to their molecular environment. Our analysis provides an outline of the eukaryotic proteome as a network of protein complexes at a level of organization beyond binary interactions. This higher-order map contains fundamental biological information and offers the context for a more reasoned and informed approach to drug discovery.
- Published
- 2002
30. High-dose intravenous immunoglobulin therapy in juvenile myasthenia gravis
- Author
-
Anne Marie Michon, Duygu Selcen, Michael A. Nigro, and Edward Dabrowski
- Subjects
Male ,Functional training ,medicine.medical_specialty ,Adolescent ,Immunoglobulin E ,Gastroenterology ,Developmental Neuroscience ,Internal medicine ,Myasthenia Gravis ,medicine ,Juvenile ,Humans ,Age of Onset ,Child ,Autoantibodies ,biology ,business.industry ,Antibody titer ,Immunoglobulins, Intravenous ,medicine.disease ,Myasthenia gravis ,Surgery ,Treatment Outcome ,Neurology ,El Niño ,Child, Preschool ,Pediatrics, Perinatology and Child Health ,Toxicity ,biology.protein ,Female ,Neurology (clinical) ,Antibody ,business - Abstract
Autoimmune neurologic disease management has been significantly modified by the use of high-dose intravenous immunoglobulin (HDIVIG) during the past 15 years. Venous access, readily available IgG (until recently), and the relative lack of serious identifiable complications have prompted its use in myasthenia gravis. In adults, its effectiveness has been inconsistent, with variable acetylcholine receptor (AChR) antibody responses. Ten children were evaluated for clinical responses to, and complications of, HDIVIG. Weekly anti-AChR antibody titers in three patients were obtained. The HDIVIG dosage was 2 gm/kg body weight, infused at variable rates of 2 gm/kg for 1 day, 0.66 gm/kg daily for 3 days, and 0.5 g/kg daily for 4 days; in one patient the total dose was 0.8 gm/kg to correct to the ideal body weight. All children but one tolerated HDIVIG without complications. Eight patients exhibited definite improvement in functional strength after HDIVIG, but a decreasing response to HDIVIG was evident after multiple monthly treatments, warranting the additional use of corticosteroids in two patients. A decrease in anti-AChR antibody levels was observed in the three patients tested, but this decrease was constant in one patient. No correlation was observed between clinical response and antibody titers. HDIVIG is safe and effective in most patients for short-term management of juvenile myasthenia gravis, in myasthenic crises, and in preparing patients for surgery but appears to be of limited long-term benefit.
- Published
- 2000
31. Translational control of oskar generates short OSK, the isoform that induces pole plasma assembly
- Author
-
Wolfgang Breitwieser, Anne Ephrussi, Anne-Marie Michon, and Finn-Hugo Markussen
- Subjects
Cytoplasm ,Blotting, Western ,Molecular Sequence Data ,Genes, Insect ,Biology ,oskar ,Feedback ,DEAD-box RNA Helicases ,Open Reading Frames ,Oogenesis ,Isomerism ,Protein biosynthesis ,Morphogenesis ,Animals ,Drosophila Proteins ,Point Mutation ,RNA, Messenger ,Codon ,Molecular Biology ,Pole plasm assembly ,Cytoskeleton ,In Situ Hybridization ,Genetics ,Messenger RNA ,Base Sequence ,urogenital system ,RNA ,Gene Expression Regulation, Developmental ,Membrane Transport Proteins ,Proteins ,Translation (biology) ,RNA Nucleotidyltransferases ,Cell biology ,Open reading frame ,Insect Hormones ,Protein Biosynthesis ,Pole plasm ,Oocytes ,Drosophila ,RNA Helicases ,Developmental Biology - Abstract
At the posterior pole of the Drosophila oocyte, oskar induces a tightly localized assembly of pole plasm. This spatial restriction of oskar activity has been thought to be achieved by the localization of oskar mRNA, since mislocalization of the RNA to the anterior induces anterior pole plasm. However, ectopic pole plasm does not form in mutant ovaries where oskar mRNA is not localized, suggesting that the unlocalized mRNA is inactive. As a first step towards understanding how oskar activity is restricted to the posterior pole, we analyzed oskar translation in wild type and mutants. We show that the targeting of oskar activity to the posterior pole involves two steps of spatial restriction, cytoskeleton-dependent localization of the mRNA and localization-dependent translation. Furthermore, our experiments demonstrate that two isoforms of Oskar protein are produced by alternative start codon usage. The short isoform, which is translated from the second in-frame AUG of the mRNA, has full oskar activity. Finally, we show that when oskar RNA is localized, accumulation of Oskar protein requires the functions of vasa and tudor, as well as oskar itself, suggesting a positive feedback mechanism in the induction of pole plasm by oskar.
- Published
- 1995
32. Requirement for Drosophila cytoplasmic tropomyosin in oskar mRNA localization
- Author
-
Antoine Guichet, Anne-Marie Michon, Anne Ephrussi, Jolanta B. Glotzer, and Miklós Erdélyi
- Subjects
Cytoplasm ,RNA localization ,Tropomyosin ,Biology ,oskar ,Gene interaction ,Gene expression ,medicine ,Animals ,Drosophila Proteins ,RNA, Messenger ,Genetics ,Multidisciplinary ,urogenital system ,RNA ,Cell Polarity ,Proteins ,RNA-Binding Proteins ,Oocyte ,Actins ,Cell biology ,medicine.anatomical_structure ,Mutation ,Pole plasm ,Oocytes ,Drosophila ,Female ,Germ cell - Abstract
THE localization of oskar (osk) RNA to the posterior pole of the developing fruit fly (Drosophila) oocyte induces the assembly of pole plasm, causing development of the abdomen and germ line1,2. Failure to localize oskar RNA results in embryos that lack abdomen and germ cells. Conversely, mis-targeting of oskar RNA to the anterior of the oocyte causes formation of ectopic abdomen and germ cells at the anterior pole3. Maternal mutants that have reduced pole plasm activity produce sterile adults with normal abdominal development, suggesting that germ cells are more sensitive than abdomen to defects in pole plasm assembly4. Thus mutations in genes that reduce oskar RNA localization or activity can be recovered as viable sterile adults. In a screen for mutants defective in germ cell formation, we isolated nine alleles of the tropomyosin II gene5. Here we show that mutations in tropomyosin II (TmII) virtually abolish oskar RNA localization to the posterior pole, suggesting an involvement of the actin network in oskar RNA localization.
- Published
- 1995
33. Structure-BasedOptimization of Naphthyridones into Potent ATAD2 Bromodomain Inhibitors.
- Author
-
Paul Bamborough, Chun-wa Chung, RebeccaC. Furze, Paola Grandi, Anne-Marie Michon, Robert J. Sheppard, Heather Barnett, Hawa Diallo, DavidP. Dixon, Clement Douault, Emma J. Jones, Bhumika Karamshi, Darren J. Mitchell, Rab K. Prinjha, Christina Rau, RobertJ. Watson, Thilo Werner, and Emmanuel H. Demont
- Published
- 2015
- Full Text
- View/download PDF
34. Fragment-Based Discovery of Low-Micromolar ATAD2Bromodomain Inhibitors.
- Author
-
Emmanuel H. Demont, Chun-wa Chung, RebeccaC. Furze, Paola Grandi, Anne-Marie Michon, Chris Wellaway, Nathalie Barrett, Angela M. Bridges, PeterD. Craggs, Hawa Diallo, David P. Dixon, Clement Douault, Amanda J. Emmons, EmmaJ. Jones, Bhumika V. Karamshi, Kelly Locke, Darren J. Mitchell, BernadetteH. Mouzon, Rab K. Prinjha, and Andy D. Roberts
- Published
- 2015
- Full Text
- View/download PDF
35. Book Review
- Author
-
Anne Marie Michon
- Subjects
General Medicine ,Pediatrics - Published
- 1994
36. Cerebral PET in Duchenne muscular dystrophy
- Author
-
Harry T. Chugani, Michael A. Nigro, Anne Marie Michon, and Robert Rothermel
- Subjects
Pathology ,medicine.medical_specialty ,Developmental Neuroscience ,Neurology ,business.industry ,Duchenne muscular dystrophy ,Pediatrics, Perinatology and Child Health ,medicine ,Neurology (clinical) ,medicine.disease ,business - Published
- 1994
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