990,934 results on '"CRYSTALLOGRAPHY"'
Search Results
202. Synthesis and crystal structure of 1,3-bis(acetoxymethyl)-5-{[(4,6-dimethylpyridin-2-yl)amino]methyl}-2,4,6-triethylbenzene
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Manuel Stapf, Venugopal Rao Miyyapuram, Wilhelm Seichter, and Monika Mazik
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crystal structure ,tripodal molecule ,hydrogen bonding ,c—h...π interactions ,Crystallography ,QD901-999 - Abstract
In the crystal structure of the title compound, C26H36N2O4, the tripodal molecule exists in a conformation in which the substituents attached to the central arene ring are arranged in an alternating order above and below the ring plane. The heterocyclic unit is inclined at an angle of 79.6 (1)° with respect to the plane of the benzene ring. In the crystal, the molecules are connected via N—H...O bonds, forming infinite supramolecular strands. Interstrand association involves weak C—H...O and C—H...π interactions, with the pyridine ring acting as an acceptor in the latter case.
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- 2024
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203. Crystal structure and Hirshfeld surface analysis of 1-[6-bromo-2-(3-bromophenyl)-1,2,3,4-tetrahydroquinolin-4-yl]pyrrolidin-2-one
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Anastasia A. Pronina, Alexandra G. Kutasevich, Mikhail S. Grigoriev, Khudayar I. Hasanov, Nurlana D. Sadikhova, Tahir A. Javadzade, Mehmet Akkurt, and Ajaya Bhattarai
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crystal structure ,hydrogen bonds ,the povarov method ,tetrahydroquinoline ,hirshfeld surface analysis ,Crystallography ,QD901-999 - Abstract
This study presents the synthesis, characterization and Hirshfeld surface analysis of 1-[6-bromo-2-(3-bromophenyl)-1,2,3,4-tetrahydroquinolin-4-yl]pyrrolidin-2-one, C19H18Br2N2O. In the title compound, the pyrrolidine ring adopts a distorted envelope configuration. In the crystal, molecules are linked by intermolecular N—H...O, C—H...O and C—H...Br hydrogen bonds, forming a three-dimensional network. In addition, pairs of molecules along the c axis are connected by C—H...π interactions. According to a Hirshfeld surface study, H...H (36.9%), Br...H/H...Br (28.2%) and C...H/H...C (24.3%) interactions are the most significant contributors to the crystal packing.
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- 2024
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204. Crystal structure of a tris(2-aminoethyl)methane capped carbamoylmethylphosphine oxide compound
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Brandon G. Wackerle, Eric J. Werner, Richard J. Staples, and Shannon M. Biros
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crystal structure ,carbamoylmethylphosphine oxide ,intramolecular hydrogen bond ,intermolecular hydrogen bond ,Crystallography ,QD901-999 - Abstract
The molecular structure of the tripodal carbamoylmethylphosphine oxide compound diethyl {[(5-[2-(diethoxyphosphoryl)acetamido]-3-{2-[2-(diethoxyphosphoryl)acetamido]ethyl}pentyl)carbamoyl]methyl}phosphonate, C25H52N3O12P3, features six intramolecular hydrogen-bonding interactions. The phosphonate groups have key bond lengths ranging from 1.4696 (12) to 1.4729 (12) Å (P=O), 1.5681 (11) to 1.5811 (12) Å (P—O) and 1.7881 (16) to 1.7936 (16) Å (P—C). Each amide group adopts a nearly perfect trans geometry, and the geometry around each phophorus atom resembles a slightly distorted tetrahedron.
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- 2024
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205. RefXAS: an open access database of X-ray absorption spectra
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Sebastian Paripsa, Abhijeet Gaur, Frank Förste, Dmitry E. Doronkin, Wolfgang Malzer, Christopher Schlesiger, Birgit Kanngießer, Edmund Welter, Jan-Dierk Grunwaldt, and Dirk Lützenkirchen-Hecht
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x-ray absorption fine structure ,metadata ,reference database ,quality control ,data format ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Under DAPHNE4NFDI, the X-ray absorption spectroscopy (XAS) reference database, RefXAS, has been set up. For this purpose, we developed a method to enable users to submit a raw dataset, with its associated metadata, via a dedicated website for inclusion in the database. Implementation of the database includes an upload of metadata to the scientific catalogue and an upload of files via object storage, with automated query capabilities through a web server and visualization of the data and files. Based on the mode of measurements, quality criteria have been formulated for the automated check of any uploaded data. In the present work, the significant metadata fields for reusability, as well as reproducibility of results (FAIR data principles), are discussed. Quality criteria for the data uploaded to the database have been formulated and assessed. Moreover, the usability and interoperability of available XAS data/file formats have been explored. The first version of the RefXAS database prototype is presented, which features a human verification procedure, currently being tested with a new user interface designed specifically for curators; a user-friendly landing page; a full list of datasets; advanced search capabilities; a streamlined upload process; and, finally, a server-side automatic authentication and (meta-) data storage via MongoDB, PostgreSQL and (data-) files via relevant APIs.
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- 2024
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206. Development of an advanced in-line multilayer deposition system at Diamond Light Source
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Hongchang Wang, Arindam Majhi, Wai Jue Tan, Wadwan Singhapong, Christian Morawe, and Kawal Sawhney
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multilayers ,multilayer deposition system ,synchrotron radiation ,optics ,diamond-ii ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
A state-of-the-art multilayer deposition system with a 4200 mm-long linear substrate translator housed within an ultra-high vacuum chamber has been developed. This instrument is engineered to produce single and multilayer coatings, accommodating mirrors up to 2000 mm in length through the utilization of eight rectangular cathodes. To ensure the quality and reliability of the coatings, the system incorporates various diagnostic tools for in situ thickness uniformity and stress measurement. Furthermore, the system features an annealing process capable of heating up to 700°C within the load-lock chamber. The entire operation, including pump down, deposition and venting processes, is automated through user-friendly software. In addition, all essential log data, power of sputtering source, working pressure and motion positions are automatically stored for comprehensive data analysis. Preliminary commissioning results demonstrate excellent lateral film thickness uniformity, achieving 0.26% along the translation direction over 1500 mm in dynamic mode. The multilayer deposition system is poised for use in fabricating periodic, lateral-graded and depth-graded multilayers, specifically catering to the beamlines for diverse scientific applications at Diamond Light Source.
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- 2024
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207. Investigating the missing-wedge problem in small-angle X-ray scattering tensor tomography across real and reciprocal space
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Leonard C. Nielsen, Torne Tänzer, Irene Rodriguez-Fernandez, Paul Erhart, and Marianne Liebi
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tensor tomography ,small-angle scattering ,nanostructure ,missing wedge problem ,optimization ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Small-angle-scattering tensor tomography is a technique for studying anisotropic nanostructures of millimetre-sized samples in a volume-resolved manner. It requires the acquisition of data through repeated tomographic rotations about an axis which is subjected to a series of tilts. The tilt that can be achieved with a typical setup is geometrically constrained, which leads to limits in the set of directions from which the different parts of the reciprocal space map can be probed. Here, we characterize the impact of this limitation on reconstructions in terms of the missing wedge problem of tomography, by treating the problem of tensor tomography as the reconstruction of a three-dimensional field of functions on the unit sphere, represented by a grid of Gaussian radial basis functions. We then devise an acquisition scheme to obtain complete data by remounting the sample, which we apply to a sample of human trabecular bone. Performing tensor tomographic reconstructions of limited data sets as well as the complete data set, we further investigate and validate the missing wedge problem by investigating reconstruction errors due to data incompleteness across both real and reciprocal space. Finally, we carry out an analysis of orientations and derived scalar quantities, to quantify the impact of this missing wedge problem on a typical tensor tomographic analysis. We conclude that the effects of data incompleteness are consistent with the predicted impact of the missing wedge problem, and that the impact on tensor tomographic analysis is appreciable but limited, especially if precautions are taken. In particular, there is only limited impact on the means and relative anisotropies of the reconstructed reciprocal space maps.
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- 2024
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208. A new dual-thickness semi-transparent beamstop for small-angle X-ray scattering
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Haijuan Wu and Zhihong Li
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saxs ,transmission beam ,semi-transparent beamstop ,gradient attenuation ,background subtraction ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
An innovative dual-thickness semi-transparent beamstop designed to enhance the performance of small-angle X-ray scattering (SAXS) experiments is introduced. This design integrates two absorbers of differing thicknesses side by side into a single attenuator, known as a beamstop. Instead of completely stopping the direct beam, it attenuates it, allowing the SAXS detector to measure the transmitted beam through the sample. This approach achieves true synchronization in measuring both scattered and transmitted signals and effectively eliminates higher-order harmonic contributions when determining the transmission light intensity through the sample. This facilitates and optimizes signal detection and background subtraction. This contribution details the theoretical basis and practical implementation of this solution at the SAXS station on the 1W2A beamline at the Beijing Synchrotron Radiation Facility. It also anticipates its application at other SAXS stations, including that at the forthcoming High Energy Photon Source, providing an effective solution for high-precision SAXS experiments.
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- 2024
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209. TEMPUS, a Timepix4-based system for the event-based detection of X-rays
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Jonathan Correa, Alexandr Ignatenko, David Pennicard, Sabine Lange, Sergei Fridman, Sebastian Karl, Leon Lohse, Björn Senfftleben, Ilya Sergeev, Sven Velten, Deepak Prajapat, Lars Bocklage, Hubertus Bromberger, Andrey Samartsev, Aleksandr Chumakov, Rudolf Rüffer, Joachim von Zanthier, Ralf Röhlsberger, and Heinz Graafsma
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x-ray detector ,photon science ,event-driven ,sparse-readout ,timepix4 ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
TEMPUS is a new detector system being developed for photon science. It is based on the Timepix4 chip and, thus, it can be operated in two distinct modes: a photon-counting mode, which allows for conventional full-frame readout at rates up to 40 kfps; and an event-driven time-stamping mode, which allows excellent time resolution in the nanosecond regime in measurements with moderate X-ray flux. In this paper, the initial prototype, a single-chip device, is introduced, and the readout system described. Moreover, and in order to evaluate its capabilities, some tests were performed at PETRA III and ESRF for which results are also presented.
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- 2024
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210. X-ray lens figure errors retrieved by deep learning from several beam intensity images
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Manuel Sanchez del Rio, Rafael Celestre, and Juan Reyes-Herrera
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neural network ,machine learning ,compound refractive lens ,modeling ,simulation ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The phase problem in the context of focusing synchrotron beams with X-ray lenses is addressed. The feasibility of retrieving the surface error of a lens system by using only the intensity of the propagated beam at several distances is demonstrated. A neural network, trained with a few thousand simulations using random errors, can predict accurately the lens error profile that accounts for all aberrations. It demonstrates the feasibility of routinely measuring the aberrations induced by an X-ray lens, or another optical system, using only a few intensity images.
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- 2024
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211. A 1D imaging soft X-ray spectrometer for the small quantum systems instrument at the European XFEL
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Marcus Agåker, Johan Söderström, Thomas M. Baumann, Carl-Johan Englund, Ludvig Kjellsson, Rebecca Boll, Alberto De Fanis, Simon Dold, Tommaso Mazza, Jacobo Montaño, Astrid Münnich, Terence Mullins, Yevheniy Ovcharenko, Nils Rennhack, Philipp Schmidt, Björn Senfftleben, Monica Turcato, Sergey Usenko, Michael Meyer, Joseph Nordgren, and Jan-Erik Rubensson
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soft x-ray scattering ,resonant inelastic x-ray scattering ,rixs ,soft x-ray spectrometers ,x-ray free-electron lasers ,xfel ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
A 1D imaging soft X-ray spectrometer installed on the small quantum systems (SQS) scientific instrument of the European XFEL is described. It uses movable cylindrical constant-line-spacing gratings in the Rowland configuration for energy dispersion in the vertical plane, and Wolter optics for simultaneous 1D imaging of the source in the horizontal plane. The soft X-ray fluorescence spectro-imaging capability will be exploited in pump–probe measurements and in investigations of propagation effects and other nonlinear phenomena.
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- 2024
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212. BEATS: BEAmline for synchrotron X-ray microTomography at SESAME
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Gianluca Iori, Mustafa Alzu'bi, Anas Abbadi, Yazeed Al Momani, Abdel Rahman Hasoneh, Pierre Van Vaerenbergh, Ivan Cudin, Jordi Marcos, Abdalla Ahmad, Anas Mohammad, Salman Matalgah, Ibrahim Foudeh, Mohammad Al Najdawi, Adel Amro, Abid Ur Rehman, Mohammad Abugharbiyeh, Rami Khrais, Amro Aljadaa, Mohammad Nour, Hussam Al Mohammad, Farouq Al Omari, Majeda Salama, María José García Fusté, Juan Reyes-Herrera, Christian Morawe, Maher Attal, Samira Kasaei, Charalambos Chrysostomou, Tomasz Kołodziej, Mateusz Boruchowski, Paweł Nowak, Jarosław Wiechecki, Anis Fatima, Andrea Ghigo, Adriana I. Wawrzyniak, Kirsi Lorentz, Giorgio Paolucci, Frank Lehner, Michael Krisch, Marco Stampanoni, Alexander Rack, Axel Kaprolat, and Andrea Lausi
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x-ray imaging ,computed tomography ,x-ray phase-contrast ,microscopy ,radiography ,synchrotron radiation ,cultural heritage ,materials science ,biomedical imaging ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The ID10 beamline of the SESAME (Synchrotron-light for Experimental Science and Applications in the Middle East) synchrotron light source in Jordan was inaugurated in June 2023 and is now open to scientific users. The beamline, which was designed and installed within the European Horizon 2020 project BEAmline for Tomography at SESAME (BEATS), provides full-field X-ray radiography and microtomography imaging with monochromatic or polychromatic X-rays up to photon energies of 100 keV. The photon source generated by a 2.9 T wavelength shifter with variable gap, and a double-multilayer monochromator system allow versatile application for experiments requiring either an X-ray beam with high intensity and flux, and/or a partially spatial coherent beam for phase-contrast applications. Sample manipulation and X-ray detection systems are designed to allow scanning samples with different size, weight and material, providing image voxel sizes from 13 µm down to 0.33 µm. A state-of-the-art computing infrastructure for data collection, three-dimensional (3D) image reconstruction and data analysis allows the visualization and exploration of results online within a few seconds from the completion of a scan. Insights from 3D X-ray imaging are key to the investigation of specimens from archaeology and cultural heritage, biology and health sciences, materials science and engineering, earth, environmental sciences and more. Microtomography scans and preliminary results obtained at the beamline demonstrate that the new beamline ID10-BEATS expands significantly the range of scientific applications that can be targeted at SESAME.
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- 2024
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213. Accelerating imaging research at large-scale scientific facilities through scientific computing
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Chunpeng Wang, Xiaoyun Li, Rongzheng Wan, Jige Chen, Jing Ye, Ke Li, Aiguo Li, Renzhong Tai, and Alessandro Sepe
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scientific computing ,synchrotron ,imaging ,automation ,tomography ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
To date, computed tomography experiments, carried-out at synchrotron radiation facilities worldwide, pose a tremendous challenge in terms of the breadth and complexity of the experimental datasets produced. Furthermore, near real-time three-dimensional reconstruction capabilities are becoming a crucial requirement in order to perform high-quality and result-informed synchrotron imaging experiments, where a large amount of data is collected and processed within a short time window. To address these challenges, we have developed and deployed a synchrotron computed tomography framework designed to automatically process online the experimental data from the synchrotron imaging beamlines, while leveraging the high-performance computing cluster capabilities to accelerate the real-time feedback to the users on their experimental results. We have, further, integrated it within a modern unified national authentication and data management framework, which we have developed and deployed, spanning the entire data lifecycle of a large-scale scientific facility. In this study, the overall architecture, functional modules and workflow design of our synchrotron computed tomography framework are presented in detail. Moreover, the successful integration of the imaging beamlines at the Shanghai Synchrotron Radiation Facility into our scientific computing framework is also detailed, which, ultimately, resulted in accelerating and fully automating their entire data processing pipelines. In fact, when compared with the original three-dimensional tomography reconstruction approaches, the implementation of our synchrotron computed tomography framework led to an acceleration in the experimental data processing capabilities, while maintaining a high level of integration with all the beamline processing software and systems.
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- 2024
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214. VUV absorption spectra of water and nitrous oxide by a double-duty differentially pumped gas filter
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Andras Bodi, Jonas Knurr, Patrick Ascher, Patrick Hemberger, Christoph Bostedt, and Andre Al Haddad
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vacuum ultraviolet ,absorption spectroscopy ,differential pumping ,gas phase ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The differentially pumped rare-gas filter at the end of the VUV beamline of the Swiss Light Source has been adapted to house a windowless absorption cell for gases. Absorption spectra can be recorded from 7 eV to up to 21 eV photon energies routinely, as shown by a new water and nitrous oxide absorption spectrum. By and large, the spectra agree with previously published ones both in terms of resonance energies and absorption cross sections, but that of N2O exhibits a small shift in the {\tilde{\bf D}} band and tentative fine structures that have not yet been fully described. This setup will facilitate the measurement of absorption spectra in the VUV above the absorption edge of LiF and MgF2 windows. It will also allow us to carry out condensed-phase measurements on thin liquid sheets and solid films. Further development options are discussed, including the recording of temperature-dependent absorption spectra, a stationary gas cell for calibration measurements, and the improvement of the photon energy resolution.
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- 2024
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215. MuscleX: data analysis software for fiber diffraction patterns from muscle
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Jiranun Jiratrakanvong, Jinjian Shao, Jiaqi Li, Miguel Menendez Alvarez, Xintian Li, Prajwal Das, Grant Nikseresht, Nikhil Miskin, Ran Huo, Jules Nabon, Tristan Leduc, Eric Zhang, Weikang Ma, Gady Agam, and Thomas C. Irving
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musclex ,fiber diffraction ,data reduction ,muscles ,fibrous systems ,graphical user interfaces ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
MuscleX is an integrated, open-source computer software suite for data reduction of X-ray fiber diffraction patterns from striated muscle and other fibrous systems. It is written in Python and runs on Linux, Microsoft Windows or macOS. Most modules can be run either from a graphical user interface or in a `headless mode' from the command line, suitable for incorporation into beamline control systems. Here, we provide an overview of the general structure of the MuscleX software package and describe the specific features of the individual modules as well as examples of applications.
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- 2024
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216. New achievements in orbital angular momentum beam characterization using a Hartmann wavefront sensor and the Kirkpatrick–Baez active optical system KAOS
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Luka Novinec, Matteo Pancaldi, Flavio Capotondi, Giovanni De Ninno, Francesco Guzzi, George Kourousias, Emanuele Pedersoli, Barbara Ressel, Benedikt Rösner, Alberto Simoncig, Marco Zangrando, and Michele Manfredda
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tailored photonics beams ,orbital angular momentum of light ,wavefront sensing ,ptychography ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Advances in physics have been significantly driven by state-of-the-art technology, and in photonics and X-ray science this calls for the ability to manipulate the characteristics of optical beams. Orbital angular momentum (OAM) beams hold substantial promise in various domains such as ultra-high-capacity optical communication, rotating body detection, optical tweezers, laser processing, super-resolution imaging etc. Hence, the advancement of OAM beam-generation technology and the enhancement of its technical proficiency and characterization capabilities are of paramount importance. These endeavours will not only facilitate the use of OAM beams in the aforementioned sectors but also extend the scope of applications in diverse fields related to OAM beams. At the FERMI Free-Electron Laser (Trieste, Italy), OAM beams are generated either by tailoring the emission process on the undulator side or, in most cases, by coupling a spiral zone plate (SZP) in tandem with the refocusing Kirkpatrick–Baez active optic system (KAOS). To provide a robust and reproducible workflow to users, a Hartmann wavefront sensor (WFS) is used for both optics tuning and beam characterization. KAOS is capable of delivering both tightly focused and broad spots, with independent control over vertical and horizontal magnification. This study explores a novel non-conventional `near collimation' operational mode aimed at generating beams with OAM that employs the use of a lithographically manufactured SZP to achieve this goal. The article evaluates the mirror's performance through Hartmann wavefront sensing, offers a discussion of data analysis methodologies, and provides a quantitative analysis of these results with ptychographic reconstructions.
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- 2024
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217. Characterizing electron-collecting CdTe for use in a 77 ns burst-rate imager
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Lena A. Franklin, Nicholas J. Brown, Sol M. Gruner, Elida Met-Hoxha, Mark W. Tate, and Julia Thom-Levy
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pixel array detector ,cadmium telluride ,x-ray detector ,high-z sensor ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The Keck-PAD (pixel array detector) was developed at Cornell as a burst-rate imager capable of recording images from successive electron bunches (153 ns period) from the Advanced Photon Source (APS). Both Si and hole-collecting Schottky CdTe have been successfully bonded to this ASIC (application-specific integrated circuit) and used with this frame rate. The facility upgrades at the APS will lower the bunch period to 77 ns, which will require modifications to the Keck-PAD electronics to image properly at this reduced period. In addition, operation at high X-ray energies will require a different sensor material having a shorter charge collection time. For the target energy of 40 keV for this project, simulations have shown that electron-collecting CdTe should allow >90% charge collection within 35 ns. This collection time will be sufficient to sample the signal from one frame and prepare for the next. 750 µm-thick electron-collecting Schottky CdTe has been obtained from Acrorad and bonded to two different charge-integrating ASICs developed at Cornell, the Keck-PAD and the CU-APS-PAD. Carrier mobility has been investigated using the detector response to single X-ray bunches at the Cornell High Energy Synchrotron Source and to a pulsed optical laser. The tests indicate that the collection time will meet the requirements for 77 ns imaging.
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- 2024
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218. Correcting angular distortions in Bragg coherent X-ray diffraction imaging
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Huaiyu Chen, Dmitry Dzhigaev, Alexander Björling, Fabian Westermeier, Mikhail Lyubomirskiy, Michael Stuckelberger, and Jesper Wallentin
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angular uncertainty ,angular distortions ,bragg coherent x-ray diffraction imaging ,bcdi ,phase-retrieved objects ,nano-scale particles ,angular corrections ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Bragg coherent X-ray diffraction imaging (BCDI) has emerged as a powerful technique for strain imaging and morphology reconstruction of nanometre-scale crystals. However, BCDI often suffers from angular distortions that appear during data acquisition, caused by radiation pressure, heating or imperfect scanning stages. This limits the applicability of BCDI, in particular for small crystals and high-flux X-ray beams. Here, we present a pre-processing algorithm that recovers the 3D datasets from the BCDI dataset measured under the impact of large angular distortions. We systematically investigate the performance of this method for different levels of distortion and find that the algorithm recovers the correct angles for distortions up to 16.4× (1640%) the angular step size dθ = 0.004°. We also show that the angles in a continuous scan can be recovered with high accuracy. As expected, the correction provides marked improvements in the subsequent phase retrieval.
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- 2024
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219. Hyperspectral full-field quick-EXAFS imaging at the ROCK beamline for monitoring micrometre-sized heterogeneity of functional materials under process conditions
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Valérie Briois, Jean Paul Itié, Alain Polian, Andrew King, Aliou Sadia Traore, Eric Marceau, Ovidiu Ersen, Camille La Fontaine, Laurent Barthe, Anthony Beauvois, Olga Roudenko, and Stéphanie Belin
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quick-exafs ,hyperspectral imaging ,mcr-als ,catalysis ,electrode materials ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Full-field transmission X-ray microscopy has been recently implemented at the hard X-ray ROCK–SOLEIL quick-EXAFS beamline, adding micrometre spatial resolution to the second time resolution characterizing the beamline. Benefiting from a beam size versatility due to the beamline focusing optics, full-field hyperspectral XANES imaging has been successfully used at the Fe K-edge for monitoring the pressure-induced spin transition of a 150 µm × 150 µm Fe(o-phen)2(NCS)2 single crystal and the charge of millimetre-sized LiFePO4 battery electrodes. Hyperspectral imaging over 2000 eV has been reported for the simultaneous monitoring of Fe and Cu speciation changes during activation of a FeCu bimetallic catalyst along a millimetre-sized catalyst bed. Strategies of data acquisition and post-data analysis using Jupyter notebooks and multivariate data analysis are presented, and the gain obtained using full-field hyperspectral quick-EXAFS imaging for studies of functional materials under process conditions in comparison with macroscopic information obtained by non-spatially resolved quick-EXAFS techniques is discussed.
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- 2024
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220. Using convolutional neural network denoising to reduce ambiguity in X-ray coherent diffraction imaging
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Kang-Ching Chu, Chia-Hui Yeh, Jhih-Min Lin, Chun-Yu Chen, Chi-Yuan Cheng, Yi-Qi Yeh, Yu-Shan Huang, and Yi-Wei Tsai
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coherent diffraction imaging ,machine learning ,noise2noise ,mixed-scale dense network ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The inherent ambiguity in reconstructed images from coherent diffraction imaging (CDI) poses an intrinsic challenge, as images derived from the same dataset under varying initial conditions often display inconsistencies. This study introduces a method that employs the Noise2Noise approach combined with neural networks to effectively mitigate these ambiguities. We applied this methodology to hundreds of ambiguous reconstructed images retrieved from a single diffraction pattern using a conventional retrieval algorithm. Our results demonstrate that ambiguous features in these reconstructions are effectively treated as inter-reconstruction noise and are significantly reduced. The post-Noise2Noise treated images closely approximate the average and singular value decomposition analysis of various reconstructions, providing consistent and reliable reconstructions.
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- 2024
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221. A distributed software system for integrating data-intensive imaging methods in a hard X-ray nanoprobe beamline at the SSRF
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Peicheng Zhang, Zhisen Jiang, Yan He, and Aiguo Li
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distributed software system ,synchrotron radiation big data ,ptychography ,parallel computing ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The development of hard X-ray nanoprobe techniques has given rise to a number of experimental methods, like nano-XAS, nano-XRD, nano-XRF, ptychography and tomography. Each method has its own unique data processing algorithms. With the increase in data acquisition rate, the large amount of generated data is now a big challenge to these algorithms. In this work, an intuitive, user-friendly software system is introduced to integrate and manage these algorithms; by taking advantage of the loosely coupled, component-based design approach of the system, the data processing speed of the imaging algorithm is enhanced through optimization of the parallelism efficiency. This study provides meaningful solutions to tackle complexity challenges faced in synchrotron data processing.
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- 2024
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222. New opportunities for time-resolved imaging using diffraction-limited storage rings
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Zisheng Yao, Julia Rogalinski, Eleni Myrto Asimakopoulou, Yuhe Zhang, Korneliya Gordeyeva, Zhaleh Atoufi, Hanna Dierks, Samuel McDonald, Stephen Hall, Jesper Wallentin, Daniel Söderberg, Kim Nygård, and Pablo Villanueva-Perez
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time-resolved microscopy ,max iv ,formax beamline ,megahertz imaging ,diffraction-limited storage rings ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The advent of diffraction-limited storage rings (DLSRs) has boosted the brilliance or coherent flux by one to two orders of magnitude with respect to the previous generation. One consequence of this brilliance enhancement is an increase in the flux density or number of photons per unit of area and time, which opens new possibilities for the spatiotemporal resolution of X-ray imaging techniques. This paper studies the time-resolved microscopy capabilities of such facilities by benchmarking the ForMAX beamline at the MAX IV storage ring. It is demonstrated that this enhanced flux density using a single harmonic of the source allows micrometre-resolution time-resolved imaging at 2000 tomograms per second and 1.1 MHz 2D acquisition rates using the full dynamic range of the detector system.
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- 2024
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223. Spexwavepy: an open-source Python package for X-ray wavefront sensing using speckle-based techniques
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Lingfei Hu, Hongchang Wang, and Kawal Sawhney
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spexwavepy ,x-ray optics ,wavefront sensing ,speckle tracking ,python packages ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
In situ wavefront sensing plays a critical role in the delivery of high-quality beams for X-ray experiments. X-ray speckle-based techniques stand out among other in situ techniques for their easy experimental setup and various data acquisition modes. Although X-ray speckle-based techniques have been under development for more than a decade, there are still no user-friendly software packages for new researchers to begin with. Here, we present an open-source Python package, spexwavepy, for X-ray wavefront sensing using speckle-based techniques. This Python package covers a variety of X-ray speckle-based techniques, provides plenty of examples with real experimental data and offers detailed online documentation for users. We hope it can help new researchers learn and apply the speckle-based techniques for X-ray wavefront sensing to synchrotron radiation and X-ray free-electron laser beamlines.
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- 2024
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224. Comparing single-shot damage thresholds of boron carbide and silicon at the European XFEL
- Author
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Marziyeh Tavakkoly, Jaromir Chalupsky, Vera Hajkova, Wolfgang Hillert, Simon Jelinek, Libor Juha, Mikako Makita, Tommaso Mazza, Michael Meyer, Jacobo Montano, Harald Sinn, Vojtech Vozda, and Maurizio Vannoni
- Subjects
damage threshold ,single-shot damage threshold ,b4c coating ,x-ray mirrors ,xfel ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Xray free-electron lasers (XFELs) enable experiments that would have been impractical or impossible at conventional X-ray laser facilities. Indeed, more XFEL facilities are being built and planned, with their aim to deliver larger pulse energies and higher peak brilliance. While seeking to increase the pulse power, it is quintessential to consider the maximum pulse fluence that a grazing-incidence FEL mirror can withstand. To address this issue, several studies were conducted on grazing-incidence damage by soft X-ray FEL pulses at the European XFEL facility. Boron carbide (B4C) coatings on polished silicon substrate were investigated using 1 keV photon energy, similar to the X-ray mirrors currently installed at the soft X-ray beamlines (SASE3). The purpose of this study is to compare the damage threshold of B4C and Si to determine the advantages, tolerance and limits of using B4C coatings.
- Published
- 2024
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- View/download PDF
225. Demonstration of full polarization control of soft X-ray pulses with Apple X undulators at SwissFEL using recoil ion momentum spectroscopy
- Author
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Christoph Kittel, Antoine Sarracini, Sven Augustin, Ningchen Yang, Andre Al Haddad, Eugenio Ferrari, Gregor Knopp, Jonas Knurr, Ana Sofia Morillo-Candas, Iwona Swiderska, Eduard Prat, Nicholas Sammut, Thomas Schmidt, Christoph Bostedt, Marco Calvi, and Kirsten Schnorr
- Subjects
soft x-rays ,fels ,polarization ,undulator ,coltrims ,apple x ,reaction microscope ,recoil ion momentum spectroscopy ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The ability to freely control the polarization of X-rays enables measurement techniques relying on circular or linear dichroism, which have become indispensable tools for characterizing the properties of chiral molecules or magnetic structures. Therefore, the demand for polarization control in X-ray free-electron lasers is increasing to enable polarization-sensitive dynamical studies on ultrafast time scales. The soft X-ray branch Athos of SwissFEL was designed with the aim of providing freely adjustable and arbitrary polarization by building its undulator solely from modules of the novel Apple X type. In this paper, the magnetic model of the linear inclined and circular Apple X polarization schemes are studied. The polarization is characterized by measuring the angular electron emission distributions of helium for various polarizations using cold target recoil ion momentum spectroscopy. The generation of fully linear polarized light of arbitrary angle, as well as elliptical polarizations of varying degree, are demonstrated.
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- 2024
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226. Development and performance simulations of a soft X-ray and XUV split-and-delay unit at beamlines FL23/24 at FLASH2 for time-resolved two-color pump–probe experiments
- Author
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Matthias Dreimann, Frank Wahlert, Sebastian Roling, Rolf Treusch, Elke Plönjes, and Helmut Zacharias
- Subjects
time-resolved pump–probe ,xuv ,soft x-ray ,free-electron laser ,two-color experiments ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The split-and-delay unit (SDU) at FLASH2 will be upgraded to enable the simultaneous operation of two temporally, spatially and spectrally separated probe beams when the free-electron laser undulators are operated in a two-color scheme. By means of suitable thin filters and an optical grating beam path a wide range of combinations of photon energies in the spectral range from 150 eV to 780 eV can be chosen. In this paper, simulations of the spectral transmission and performance parameters of the filter technique are discussed, along with a monochromator with dispersion compensation presently under construction.
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- 2024
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227. StreamSAXS: a Python-based workflow platform for processing streaming SAXS/WAXS data
- Author
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Jiayi Wang, Zheng Dong, Yi Zhang, Wenqiang Hua, Zudeng Wang, Huilong Guo, Yiming Yang, and Xiaoxue Bi
- Subjects
x-ray scattering ,data analysis ,scientific workflow ,plug-in framework ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
StreamSAXS is a Python-based small- and wide-angle X-ray scattering (SAXS/WAXS) data analysis workflow platform with graphical user interface (GUI). It aims to provide an interactive and user-friendly tool for analysis of both batch data files and real-time data streams. Users can easily create customizable workflows through the GUI to meet their specific needs. One characteristic of StreamSAXS is its plug-in framework, which enables developers to extend the built-in workflow tasks. Another feature is the support for both already acquired and real-time data sources, allowing StreamSAXS to function as an offline analysis platform or be integrated into large-scale acquisition systems for end-to-end data management. This paper presents the core design of StreamSAXS and provides user cases demonstrating its utilization for SAXS/WAXS data analysis in offline and online scenarios.
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- 2024
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228. Development of a high-performance and cost-effective in-vacuum undulator
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Kei Imamura, Yuichiro Kida, Akihiro Kagamihata, Takamitsu Seike, Shigeru Yamamoto, Haruhiko Ohashi, and Takashi Tanaka
- Subjects
in-vacuum undulator ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
In-vacuum undulators (IVUs), which have become an essential tool in synchrotron radiation facilities, have two technical challenges toward further advancement: one is a strong attractive force between top and bottom magnetic arrays, and the other is a stringent requirement on magnetic materials to avoid demagnetization. The former imposes a complicated design on mechanical and vacuum structures, while the latter limits the possibility of using high-performance permanent magnets. To solve these issues, a number of technical developments have been made, such as force cancellation and modularization of magnetic arrays, and enhancement of resistance against demagnetization by means of a special magnetic circuit. The performance of a new IVU built upon these technologies has revealed their effectiveness for constructing high-performance IVUs in a cost-effective manner.
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- 2024
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229. Prediction of the treatment effect of FLASH radiotherapy with synchrotron radiation from the Circular Electron–Positron Collider (CEPC)
- Author
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Junyu Zhang, Xiangyu Wu, Pengyuan Qi, and Jike Wang
- Subjects
flash radiotherapy ,treatment effect ,circular electron–positron collider ,cepc ,synchrotron radiation ,simulations ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The Circular Electron–Positron Collider (CEPC) in China can also work as an excellent powerful synchrotron light source, which can generate high-quality synchrotron radiation. This synchrotron radiation has potential advantages in the medical field as it has a broad spectrum, with energies ranging from visible light to X-rays used in conventional radiotherapy, up to several megaelectronvolts. FLASH radiotherapy is one of the most advanced radiotherapy modalities. It is a radiotherapy method that uses ultra-high dose rate irradiation to achieve the treatment dose in an instant; the ultra-high dose rate used is generally greater than 40 Gy s−1, and this type of radiotherapy can protect normal tissues well. In this paper, the treatment effect of CEPC synchrotron radiation for FLASH radiotherapy was evaluated by simulation. First, a Geant4 simulation was used to build a synchrotron radiation radiotherapy beamline station, and then the dose rate that the CEPC can produce was calculated. A physicochemical model of radiotherapy response kinetics was then established, and a large number of radiotherapy experimental data were comprehensively used to fit and determine the functional relationship between the treatment effect, dose rate and dose. Finally, the macroscopic treatment effect of FLASH radiotherapy was predicted using CEPC synchrotron radiation through the dose rate and the above-mentioned functional relationship. The results show that the synchrotron radiation beam from the CEPC is one of the best beams for FLASH radiotherapy.
- Published
- 2024
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230. Diamond sensors for hard X-ray energy and position resolving measurements at the European XFEL
- Author
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Tuba Çonka Yıldız, Wolfgang Freund, Jia Liu, Matthias Schreck, Dmitry Khakhulin, Hazem Yousef, Christopher Milne, and Jan Grünert
- Subjects
diamond sensor ,diamond detector ,sccvd diamond ,electronic-grade diamond ,photon diagnostics ,x-ray free-electron lasers ,pulse resolved ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The diagnostics of X-ray beam properties has a critical importance at the European X-ray Free-Electron Laser facility. Besides existing diagnostic components, utilization of a diamond sensor was proposed to achieve radiation-hard, non-invasive beam position and pulse energy measurements for hard X-rays. In particular, with very hard X-rays, diamond-based sensors become a useful complement to gas-based devices which lose sensitivity due to significantly reduced gas cross-sections. The measurements presented in this work were performed with diamond sensors consisting of an electronic-grade single-crystal chemical-vapor-deposition diamond with position-sensitive resistive electrodes in a duo-lateral configuration. The results show that the diamond sensor delivers pulse-resolved X-ray beam position data at 2.25 MHz with an uncertainty of less than 1% of the beam size. To our knowledge this is the first demonstration of pulse-resolved position measurements at the MHz rate using a transmissive diamond sensor at a free-electron laser facility. It can therefore be a valuable tool for X-ray free-electron lasers, especially for high-repetition-rate machines, enabling applications such as beam-based alignment and intra-pulse-train position feedback.
- Published
- 2024
- Full Text
- View/download PDF
231. MLgrating: a program for simulating multilayer gratings for tender X-ray applications
- Author
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Andrew Walters, Shengyou Wen, Qiushi Huang, Zhanshan Wang, Hongchang Wang, and Kawal Sawhney
- Subjects
multilayer gratings ,grating efficiency simulations ,blazed gratings ,laminar gratings ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Multilayer gratings are increasingly popular optical elements at X-ray beamlines, as they can provide much higher photon flux in the tender X-ray range compared with traditional single-layer coated gratings. While there are several proprietary software tools that provide the functionality to simulate the efficiencies of such gratings, until now the X-ray community has lacked an open-source alternative. Here MLgrating is presented, a program for simulating the efficiencies of both multilayer gratings and single-layer coated gratings for X-ray applications. MLgrating is benchmarked by comparing its output with that of other software tools and plans are discussed for how the program could be extended in the future.
- Published
- 2024
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- View/download PDF
232. Double-edge scan wavefront metrology and its application in crystal diffraction wavefront measurements
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Fang Liu, Ming Li, Qianshun Diao, Zhe Li, Zhibang Shen, Fan Li, Zhen Hong, Hongkai Lian, Shuaipeng Yue, Qingyan Hou, Changrui Zhang, Dongni Zhang, Congcong Li, Fugui Yang, and Junliang Yang
- Subjects
wavefront metrology ,crystal diffraction ,double-edge ,diffraction-limited ,wavefront error ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Achieving diffraction-limited performance in fourth-generation synchrotron radiation sources demands monochromator crystals that can preserve the wavefront across an unprecedented extensive range. There is an urgent need for techniques of absolute crystal diffraction wavefront measurement. At the Beijing Synchrotron Radiation Facility (BSRF), a novel edge scan wavefront metrology technique has been developed. This technique employs a double-edge tracking method, making diffraction-limited level absolute crystal diffraction wavefront measurement a reality. The results demonstrate an equivalent diffraction surface slope error below 70 nrad (corresponding to a wavefront phase error of 4.57% λ) r.m.s. within a nearly 6 mm range for a flat crystal in the crystal surface coordinate. The double-edge structure contributes to exceptional measurement precision for slope error reproducibility, achieving levels below 15 nrad (phase error reproducibility < λ/100) even at a first-generation synchrotron radiation source. Currently, the measurement termed double-edge scan (DES) has already been regarded as a critical feedback mechanism in the fabrication of next-generation crystals.
- Published
- 2024
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- View/download PDF
233. Development of an X-ray ionization beam position monitor for PAL-XFEL soft X-rays
- Author
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Seonghan Kim, SunMin Hwang, Hoyoung Jang, Seungcheol Lee, and HyoJung Hyun
- Subjects
x-ray free-electron laser ,soft x-rays ,ionization ,in situ diagnostics ,beam position monitoring ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The Pohang Accelerator Laboratory X-ray Free-Electron Laser (PAL-XFEL) operates hard X-ray and soft X-ray beamlines for conducting scientific experiments providing intense ultrashort X-ray pulses based on the self-amplified spontaneous emission (SASE) process. The X-ray free-electron laser is characterized by strong pulse-to-pulse fluctuations resulting from the SASE process. Therefore, online photon diagnostics are very important for rigorous measurements. The concept of photo-absorption and emission using solid materials is seldom considered in soft X-ray beamline diagnostics. Instead, gas monitoring detectors, which utilize the photo-ionization of noble gas, are employed for monitoring the beam intensity. To track the beam position at the soft X-ray beamline in addition to those intensity monitors, an X-ray ionization beam position monitor (XIBPM) has been developed and characterized at the soft X-ray beamline of PAL-XFEL. The XIBPM utilizes ionization of either the residual gas in an ultra-high-vacuum environment or injected krypton gas, along with a microchannel plate with phosphor. The XIBPM was tested separately for monitoring horizontal and vertical beam positions, confirming the feasibility of tracking relative changes in beam position both on average and down to single-shot measurements. This paper presents the basic structure and test results of the newly developed non-invasive XIBPM.
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- 2024
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- View/download PDF
234. Electrochemical cell for synchrotron nuclear resonance techniques
- Author
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Sergey Yaroslavtsev and Jean-Philippe Celse
- Subjects
cell design ,electrochemistry ,nuclear resonance techniques ,mössbauer spectroscopy ,synchrotron radiation ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Developing new materials for Li-ion and Na-ion batteries is a high priority in materials science. Such development always includes performance tests and scientific research. Synchrotron radiation techniques provide unique abilities to study batteries. Electrochemical cell design should be optimized for synchrotron studies without losing electrochemical performance. Such design should also be compatible with operando measurement, which is the most appropriate approach to study batteries and provides the most reliable results. The more experimental setups a cell can be adjusted for, the easier and faster the experiments are to carry out and the more reliable the results will be. This requires optimization of window materials and sizes, cell topology, pressure distribution on electrodes etc. to reach a higher efficiency of measurement without losing stability and reproducibility in electrochemical cycling. Here, we present a cell design optimized for nuclear resonance techniques, tested using nuclear forward scattering, synchrotron Mössbauer source and nuclear inelastic scattering.
- Published
- 2024
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235. Hard X-ray imaging and tomography at the Biomedical Imaging and Therapy beamlines of Canadian Light Source
- Author
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Sergey Gasilov, M. Adam Webb, Arash Panahifar, Ning Zhu, Omar Marinos, Toby Bond, David M. L. Cooper, and Dean Chapman
- Subjects
hard x-rays ,microtomography ,in vivo imaging ,time-resolved studies ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The Biomedical Imaging and Therapy facility of the Canadian Light Source comprises two beamlines, which together cover a wide X-ray energy range from 13 keV up to 140 keV. The beamlines were designed with a focus on synchrotron applications in preclinical imaging and veterinary science as well as microbeam radiation therapy. While these remain a major part of the activities of both beamlines, a number of recent upgrades have enhanced the versatility and performance of the beamlines, particularly for high-resolution microtomography experiments. As a result, the user community has been quickly expanding to include researchers in advanced materials, batteries, fuel cells, agriculture, and environmental studies. This article summarizes the beam properties, describes the endstations together with the detector pool, and presents several application cases of the various X-ray imaging techniques available to users.
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- 2024
- Full Text
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236. Study on the UV FEL single-shot damage threshold of an Au thin film
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Meiyi Wu, Qinming Li, Mingchang Wang, Qinghao Zhu, Jiandong Cai, Zhongmin Xu, Hao Zhou, Long Huang, Bingbing Zhang, Runze Qi, Zhe Zhang, Wenbin Li, Yinpeng Zhong, and Weiqing Zhang
- Subjects
free-electron laser ,beamline optics ,thin film coating ,single-shot damage threshold ,au ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The damage threshold of an Au-coated flat mirror, one of the reflective optics installed on the FEL-2 beamline of the Dalian Coherent Light Source, China, upon far-UV free-electron laser irradiation is evaluated. The surface of the coating is characterized by profilometer and optical microscope. A theoretical approach of the phenomenon is also presented, by application of conventional single-pulse damage threshold calculations, a one-dimensional thermal diffusion model, as well as finite-element analysis with ANSYS.
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- 2024
- Full Text
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237. Effectiveness of ab initio molecular dynamics in simulating EXAFS spectra from layered systems
- Author
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F. d'Acapito and M. A. Rehman
- Subjects
exafs ,ab initio molecular dynamics ,density functional theory ,thin films ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The simulation of EXAFS spectra of thin films via ab initio methods is discussed. The procedure for producing the spectra is presented as well as an application to a two-dimensional material (WSe2) where the effectiveness of this method in reproducing the spectrum and the linear dichroic response is shown. A series of further examples in which the method has been employed for the structural determination of materials are given.
- Published
- 2024
- Full Text
- View/download PDF
238. Indirect detector for ultra-high-speed X-ray micro-imaging with increased sensitivity to near-ultraviolet scintillator emission
- Author
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Bratislav Lukić, Alexander Rack, Lukas Helfen, Daniel J. Foster, Alexey Ershov, Richard Welss, Stéphane François, and Xavier Rochet
- Subjects
indirect x-ray detectors ,high-speed imaging ,micro-imaging ,polychromatic radiation ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Ultra-high-speed synchrotron-based hard X-ray (i.e. above 10 keV) imaging is gaining a growing interest in a number of scientific domains for tracking non-repeatable dynamic phenomena at spatio-temporal microscales. This work describes an optimized indirect X-ray imaging microscope designed to achieve high performance at micrometre pixel size and megahertz acquisition speed. The entire detector optical arrangement has an improved sensitivity within the near-ultraviolet (NUV) part of the emitted spectrum (i.e. 310–430 nm wavelength). When combined with a single-crystal fast-decay scintillator, such as LYSO:Ce (Lu2−xYxSiO5:Ce), it exploits the potential of the NUV light-emitting scintillators. The indirect arrangement of the detector makes it suitable for high-dose applications that require high-energy illumination. This allows for synchrotron single-bunch hard X-ray imaging to be performed with improved true spatial resolution, as herein exemplified through pulsed wire explosion and superheated near-nozzle gasoline injection experiments at a pixel size of 3.2 µm, acquisition rates up to 1.4 MHz and effective exposure time down to 60 ps.
- Published
- 2024
- Full Text
- View/download PDF
239. High-angular-sensitivity X-ray phase-contrast microtomography of soft tissue through a two-directional beam-tracking synchrotron set-up
- Author
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Carlos Navarrete-León, P. Stephen Patrick, Adam Doherty, Harry Allan, Silvia Cipiccia, Shashidhara Marathe, Kaz Wanelik, Michela Esposito, Charlotte K. Hagen, Alessandro Olivo, and Marco Endrizzi
- Subjects
phase-contrast imaging ,tomography ,bioimaging ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Two-directional beam-tracking (2DBT) is a method for phase-contrast imaging and tomography that uses an intensity modulator to structure the X-ray beam into an array of independent circular beamlets that are resolved by a high-resolution detector. It features isotropic spatial resolution, provides two-dimensional phase sensitivity, and enables the three-dimensional reconstructions of the refractive index decrement, δ, and the attenuation coefficient, μ. In this work, the angular sensitivity and the spatial resolution of 2DBT images in a synchrotron-based implementation is reported. In its best configuration, angular sensitivities of ∼20 nrad and spatial resolution of at least 6.25 µm in phase-contrast images were obtained. Exemplar application to the three-dimensional imaging of soft tissue samples, including a mouse liver and a decellularized porcine dermis, is also demonstrated.
- Published
- 2024
- Full Text
- View/download PDF
240. A versatile sample-delivery system for X-ray photoelectron spectroscopy of in-flight aerosols and free nanoparticles at MAX IV Laboratory
- Author
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C. Preger, J. Rissler, A. Kivimäki, A. C. Eriksson, and N. Walsh
- Subjects
aerosols ,free nanoparticles ,in-flight ,sample-delivery systems ,max iv ,x-ray photoelectron spectroscopy ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Aerosol science is of utmost importance for both climate and public health research, and in recent years X-ray techniques have proven effective tools for aerosol-particle characterization. To date, such methods have often involved the study of particles collected onto a substrate, but a high photon flux may cause radiation damage to such deposited particles and volatile components can potentially react with the surrounding environment after sampling. These and many other factors make studies on collected aerosol particles challenging. Therefore, a new aerosol sample-delivery system dedicated to X-ray photoelectron spectroscopy studies of aerosol particles and gas molecules in-flight has been developed at the MAX IV Laboratory. The aerosol particles are brought from atmospheric pressure to vacuum in a continuous flow, ensuring that the sample is constantly renewed, thus avoiding radiation damage, and allowing measurements on the true unsupported aerosol. At the same time, available gas molecules can be used for energy calibration and to study gas-particle partitioning. The design features of the aerosol sample-delivery system and important information on the operation procedures are described in detail here. Furthermore, to demonstrate the experimental range of the aerosol sample-delivery system, results from aerosol particles of different shape, size and composition are presented, including inorganic atmospheric aerosols, secondary organic aerosols and engineered nanoparticles.
- Published
- 2024
- Full Text
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241. Vibrational stability improvement of a mirror system using active mass damping
- Author
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Shijing He, Haoran Yuan, Tianyu Wu, Nuo Chen, Xinyu Zhang, Zhizhuo Wang, Xuerong Liu, and Fang Liu
- Subjects
active vibration control ,active mass damper ,spillover effect ,free-electron laser ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Addressing the demand for high stability of beamline instruments at the SHINE facility, a high stability mirror regulating mechanism has been developed for mirror adjustments. Active mass damping was adopted to attenuate pitch angle vibrations of mirrors caused by structural vibrations. An internal absolute velocity feedback was used to reduce the negative impact of spillover effects and to improve performance. The experiment was conducted on a prototype structure of a mirror regulating mechanism, and results showed that the vibration RMS of the pitch angle was effectively attenuated from 47 nrad to 27 nrad above 1 Hz.
- Published
- 2024
- Full Text
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242. Area normalization of HERFD-XANES spectra
- Author
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Luca Bugarin, Hugo Alexander Suarez Orduz, and Pieter Glatzel
- Subjects
herfd-xanes ,chemical sensitivity ,thomas-reiche-kuhn sum rule ,l3-edge ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The normalization of X-ray absorption near-edge structure (XANES) spectra is required for comparing spectral features and extracting quantitative information in analytical techniques such as linear combination analysis, principal component analysis and multivariate curve resolution. Most published data are normalized to the edge-jump, but normalization to the spectral area has also been applied. The latter is particularly attractive if only a small energy range around the absorption can be recorded reliably. Here, the two normalization methods are compared at the L3-edge of Pt, Pd and Rh, and at the Ni K-edge using experimental and calculated spectra. Normalization to the spectral area is found to be a viable approach if the range for the area normalization is sufficiently large.
- Published
- 2024
- Full Text
- View/download PDF
243. In situ photodeposition of ultra-small palladium particles on TiO2
- Author
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Elizaveta Kozyr, Sara Martí-Sánchez, Alina Skorynina, Jordi Arbiol, Carlos Escudero, Lorenzo Mino, and Aram Bugaev
- Subjects
photocatalysis ,pd/tio2 ,operando spectroscopy ,xanes ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
In situ and operando investigation of photocatalysts plays a fundamental role in understanding the processes of active phase formation and the mechanisms of catalytic reactions, which is crucial for the rational design of more efficient materials. Using a custom-made operando photocatalytic cell, an in situ procedure to follow the formation steps of Pd/TiO2 photocatalyst by synchrotron-based X-ray absorption spectroscopy (XAS) is proposed. The procedure resulted in the formation of ∼1 nm Pd particles with a much narrower size distribution and homogeneous spreading over TiO2 support compared with the samples generated in a conventional batch reactor. The combination of in situ XAS spectroscopy with high-angle annular dark-field scanning transmission electron microscopy demonstrated the formation of single-atom Pd(0) sites on TiO2 as the initial step of the photodeposition process. Palladium hydride particles were observed for all investigated samples upon exposure to formic acid solutions.
- Published
- 2024
- Full Text
- View/download PDF
244. Development of a flat jet delivery system for soft X-ray spectroscopy at MAX IV
- Author
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Tamires Gallo, Luigi Adriano, Michael Heymann, Agnieszka Wrona, Noelle Walsh, Gunnar Öhrwall, Flavia Callefo, Slawomir Skruszewicz, Mahesh Namboodiri, Ricardo Marinho, Joachim Schulz, and Joana Valerio
- Subjects
liquid jet spectroscopy ,3d-printed flat jet nozzle ,photoelectron spectroscopy ,photoelectron angular distribution ,soft x-ray absorption spectroscopy ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
One of the most challenging aspects of X-ray research is the delivery of liquid sample flows into the soft X-ray beam. Currently, cylindrical microjets are the most commonly used sample injection systems for soft X-ray liquid spectroscopy. However, they suffer from several drawbacks, such as complicated geometry due to their curved surface. In this study, we propose a novel 3D-printed nozzle design by introducing microscopic flat sheet jets that provide micrometre-thick liquid sheets with high stability, intending to make this technology more widely available to users. Our research is a collaboration between the EuXFEL and MAX IV research facilities. This collaboration aims to develop and refine a 3D-printed flat sheet nozzle design and a versatile jetting platform that is compatible with multiple endstations and measurement techniques. Our flat sheet jet platform improves the stability of the jet and increases its surface area, enabling more precise scanning and differential measurements in X-ray absorption, scattering, and imaging applications. Here, we demonstrate the performance of this new arrangement for a flat sheet jet setup with X-ray photoelectron spectroscopy, photoelectron angular distribution, and soft X-ray absorption spectroscopy experiments performed at the photoemission endstation of the FlexPES beamline at MAX IV Laboratory in Lund, Sweden.
- Published
- 2024
- Full Text
- View/download PDF
245. The diamond–silicon carbide composite Skeleton® as a promising material for substrates of intense X-ray beam optics
- Author
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Alexey E. Pestov, Aleksei Ya. Lopatin, Petr V. Volkov, Maria V. Zorina, Andrei Yu. Lukyanov, Ilya V. Malyshev, Mikhail S. Mikhailenko, Mikhail N. Toropov, Daniil A. Semikov, Aleksei K. Chernyshev, Nikolay I. Chkhalo, Pavel A. Yunin, Egor I. Glushkov, Sergey K. Gordeev, and Svetlana B. Korchagina
- Subjects
carbon composites ,x-ray optics ,synchrotron mirrors ,roughness ,thermophysical characteristics ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
The paper considers the possibility of using the diamond-silicon carbide composite Skeleton® with a technological coating of polycrystalline silicon as a substrate for X-ray mirrors used with powerful synchrotron radiation sources (third+ and fourth generation). Samples were studied after polishing to provide the following surface parameters: root-mean-square flatness ≃ 50 nm, micro-roughness on the frame 2 µm × 2 µm σ ≃ 0.15 nm. The heat capacity, thermal conductivity and coefficient of linear thermal expansion were investigated. For comparison, a monocrystalline silicon sample was studied under the same conditions using the same methods. The value of the coefficient of linear thermal expansion turned out to be higher than that of monocrystalline silicon and amounted to 4.3 × 10−6 K−1, and the values of thermal conductivity (5.0 W cm−1 K−1) and heat capacity (1.2 J K−1 g−1) also exceeded the values for Si. Thermally induced deformations of both Skeleton® and monocrystalline silicon samples under irradiation with a CO2 laser beam have also been experimentally studied. Taking into account the obtained thermophysical constants, the calculation of thermally induced deformation under irradiation with hard (20 keV) X-rays showed almost three times less deformation of the Skeleton® sample than of the monocrystalline silicon sample.
- Published
- 2024
- Full Text
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246. Development and commissioning of a broadband online X-ray spectrometer for the SXFEL Facility
- Author
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Zhicheng Yang, Ximing Zhang, Heping Geng, Jiahua Chen, Chao Feng, Bo Liu, and Bin Li
- Subjects
free-electron lasers ,online grating spectrometer ,sud beamline ,e-tof spectrometer ,energy resolution ,pulse length ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
A broadband online X-ray spectrometer has been designed and commissioned at the SUD beamline of the Shanghai Soft X-ray Free-Electron Laser Facility, which can deliver both SASE and seeded FEL pulses to user experiments, spanning the photon energy range of 50–620 eV. The resolving powers of the spectrometer calibrated via online measurement at 92 eV and 249 eV are ∼20000 and ∼15000, respectively, and the absolute photon energy is characterized by an electron time-of-flight spectrometer. The high energy resolution provided by the spectrometer can differentiate the fine structure in the FEL spectrum, to determine its pulse length.
- Published
- 2024
- Full Text
- View/download PDF
247. The soft X-ray spectromicroscopy beamline BL08U1A upgrade at SSRF
- Author
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Xiangjun Zhen, Zhi Guo, Zengyan Zhang, Yong Wang, and Renzhong Tai
- Subjects
elliptical polarization undulator ,photon flux ,energy resolution ,variable-line-space plane grating ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Beamline BL08U1A is a soft X-ray spectromicroscopy beamline at Shanghai Synchrotron Radiation Facility (SSRF) that exhibits the capabilities of high spatial resolution (30 nm) and high energy resolving power (over 104). As a first-generation beamline of SSRF, owing to its continuous operation over the last ten years, an urgent upgrade of the equipment including the monochromator was deemed necessary. The upgrade work included the overall construction of the monochromator and replacement of the mirrors upstream and downstream of the monochromator. Based on its original skeleton, two elliptically cylinder mirrors were designed to focus the beam horizontally, which can increase the flux density by about three times on the exit slits. Meanwhile, the application of variable-line-space gratings in the monochromator demonstrates the dual functions of dispersing and focusing on the exit slits which can decrease abberations dramatically. After the upgrade of the main components of the beamline, the energy range is 180–2000 eV, the energy resolving power reaches 16333 @ 244 eV and 12730 @ 401 eV, and the photon flux measured in the experimental station is over 2.45 × 109 photons s−1 (E/ΔE = 6440 @ 244 eV).
- Published
- 2024
- Full Text
- View/download PDF
248. Web-CONEXS: an inroad to theoretical X-ray absorption spectroscopy
- Author
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Joshua D. Elliott, Victor Rogalev, Nigel Wilson, Mihai Duta, Christopher J. Reynolds, Jacob Filik, Thomas J. Penfold, and Sofia Diaz-Moreno
- Subjects
web-conexs ,x-ray absorption spectroscopy ,xas ,first-principles simulation ,density functional theory ,dft ,x-ray absorption near-edge structure ,xanes ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Accurate analysis of the rich information contained within X-ray spectra usually calls for detailed electronic structure theory simulations. However, density functional theory (DFT), time-dependent DFT and many-body perturbation theory calculations increasingly require the use of advanced codes running on high-performance computing (HPC) facilities. Consequently, many researchers who would like to augment their experimental work with such simulations are hampered by the compounding of nontrivial knowledge requirements, specialist training and significant time investment. To this end, we present Web-CONEXS, an intuitive graphical web application for democratizing electronic structure theory simulations. Web-CONEXS generates and submits simulation workflows for theoretical X-ray absorption and X-ray emission spectroscopy to a remote computing cluster. In the present form, Web-CONEXS interfaces with three software packages: ORCA, FDMNES and Quantum ESPRESSO, and an extensive materials database courtesy of the Materials Project API. These software packages have been selected to model diverse materials and properties. Web-CONEXS has been conceived with the novice user in mind; job submission is limited to a subset of simulation parameters. This ensures that much of the simulation complexity is lifted and preliminary theoretical results are generated faster. Web-CONEXS can be leveraged to support beam time proposals and serve as a platform for preliminary analysis of experimental data.
- Published
- 2024
- Full Text
- View/download PDF
249. Controlling cantilevered adaptive X-ray mirrors
- Author
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Kenneth A. Goldberg and Kyle T. La Fleche
- Subjects
adaptive optics ,x-ray optics ,mirrors ,wavefront control ,mounting ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Modeling the behavior of a prototype cantilevered X-ray adaptive mirror (held from one end) demonstrates its potential for use on high-performance X-ray beamlines. Similar adaptive mirrors are used on X-ray beamlines to compensate optical aberrations, control wavefronts and tune mirror focal distances at will. Controlled by 1D arrays of piezoceramic actuators, these glancing-incidence mirrors can provide nanometre-scale surface shape adjustment capabilities. However, significant engineering challenges remain for mounting them with low distortion and low environmental sensitivity. Finite-element analysis is used to predict the micron-scale full actuation surface shape from each channel and then linear modeling is applied to investigate the mirrors' ability to reach target profiles. Using either uniform or arbitrary spatial weighting, actuator voltages are optimized using a Moore–Penrose matrix inverse, or pseudoinverse, revealing a spatial dependence on the shape fitting with increasing fidelity farther from the mount.
- Published
- 2024
- Full Text
- View/download PDF
250. In situ characterization of stresses, deformation and fracture of thin films using transmission X-ray nanodiffraction microscopy. Corrigendum
- Author
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Gudrun Lotze, Anand H. S. Iyer, Olof Bäcke, Sebastian Kalbfleisch, and Magnus Hörnqvist Colliander
- Subjects
nanodiffraction ,stress mapping ,in situ deformation ,nanoindentation ,sample environment ,Nuclear and particle physics. Atomic energy. Radioactivity ,QC770-798 ,Crystallography ,QD901-999 - Abstract
Errors in variable subscripts, equations and Fig. 8 in Section 3.2 of the article by Lotze et al. [(2024). J. Synchrotron Rad. 31, 42–52] are corrected.
- Published
- 2024
- Full Text
- View/download PDF
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