471 results on '"A Amvrosiadis"'
Search Results
152. Progressive compressed records
- Author
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Kuchnik, Michael, primary, Amvrosiadis, George, additional, and Smith, Virginia, additional
- Published
- 2021
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- View/download PDF
153. GABA/Glutamate Neuron Differentiation Imbalance and Increased AKT/mTOR Signaling in CNTNAP2−/−Cerebral Organoids
- Author
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Chalkiadaki, Kleanthi, Statoulla, Elpida, Zafeiri, Maria, Voudouri, Georgia, Amvrosiadis, Theoklitos, Typou, Alexandra, Theodoridou, Niki, Moschovas, Dimitrios, Avgeropoulos, Apostolos, Samiotaki, Martina, Mason, John O., and Gkogkas, Christos G.
- Abstract
The polygenic nature of autism spectrum disorder (ASD) requires the identification of converging genetic pathways during early development to elucidate its complexity and varied manifestations.
- Published
- 2025
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- View/download PDF
154. Copula-GP method for conditioning on behavioral and contextual variables reveals navigation task structure
- Author
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Kudryashova, Nina, Amvrosiadis, Theoklitos, Dupuy, Nathalie, Rochefort, Nathalie, and Onken, Arno
- Subjects
Computational Neuroscience ,Data analysis, machine learning, neuroinformatics - Published
- 2020
- Full Text
- View/download PDF
155. An ALMA survey of the SCUBA-2 Cosmology Legacy Survey UKIDSS/UDS field:Halo masses for submillimetre galaxies
- Author
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Stach, S.M., Smail, I., Amvrosiadis, A., Swinbank, A.M., Dudzevičiūtė, U., Geach, J.E., Almaini, O., Birkin, J.E., Chen, C.-C., Conselice, C.J., Cooke, E.A., Coppin, K.E.K., Dunlop, J.S., Farrah, D., Ikarashi, S., Ivison, R.J., Wardlow, J.L., Stach, S.M., Smail, I., Amvrosiadis, A., Swinbank, A.M., Dudzevičiūtė, U., Geach, J.E., Almaini, O., Birkin, J.E., Chen, C.-C., Conselice, C.J., Cooke, E.A., Coppin, K.E.K., Dunlop, J.S., Farrah, D., Ikarashi, S., Ivison, R.J., and Wardlow, J.L.
- Abstract
We present an analysis of the spatial clustering of a large sample of high-resolution, interferometically identified, submillimetre galaxies (SMGs). We measure the projected cross-correlation function of ∼350 SMGs in the UKIDSS Ultra Deep-Survey Field across a redshift range of z = 1.5-3 utilizing a method that incorporates the uncertainties in the redshift measurements for both the SMGs and cross-correlated galaxies through sampling their full probability distribution functions. By measuring the absolute linear bias of the SMGs, we derive halo masses of log 10 (M_ halo[h-1, M⊙]) ∼12.8 with no evidence of evolution in the halo masses with redshift, contrary to some previous work. From considering models of halo mass growth rates, we predict that the SMGs will reside in haloes of mass log 10(M halo[{h-1,\rm M⊙]) ∼13.2 at z = 0, consistent with the expectation that the majority of z = 1.5-3 SMGs will evolve into present-day spheroidal galaxies. Finally, comparing to models of stellar-to-halo mass ratios, we show that SMGs may correspond to systems that are maximally efficient at converting their gas reservoirs into stars. We compare them to a simple model for gas cooling in haloes that suggests that the unique properties of the SMG population, including their high levels of star formation and their redshift distribution, are a result of the SMGs being the most massive galaxies that are still able to accrete cool gas from their surrounding intragalactic medium.
- Published
- 2021
156. An ALMA survey of the SCUBA-2 Cosmology Legacy Survey UKIDSS/UDS field : Halo masses for submillimetre galaxies
- Author
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Stach, S.M., Smail, I., Amvrosiadis, A., Swinbank, A.M., Dudzevičiūtė, U., Geach, J.E., Almaini, O., Birkin, J.E., Chen, C.-C., Conselice, C.J., Cooke, E.A., Coppin, K.E.K., Dunlop, J.S., Farrah, D., Ikarashi, S., Ivison, R.J., Wardlow, J.L., Stach, S.M., Smail, I., Amvrosiadis, A., Swinbank, A.M., Dudzevičiūtė, U., Geach, J.E., Almaini, O., Birkin, J.E., Chen, C.-C., Conselice, C.J., Cooke, E.A., Coppin, K.E.K., Dunlop, J.S., Farrah, D., Ikarashi, S., Ivison, R.J., and Wardlow, J.L.
- Abstract
We present an analysis of the spatial clustering of a large sample of high-resolution, interferometically identified, submillimetre galaxies (SMGs). We measure the projected cross-correlation function of ∼350 SMGs in the UKIDSS Ultra Deep-Survey Field across a redshift range of z = 1.5-3 utilizing a method that incorporates the uncertainties in the redshift measurements for both the SMGs and cross-correlated galaxies through sampling their full probability distribution functions. By measuring the absolute linear bias of the SMGs, we derive halo masses of log 10 (M_ halo[h-1, M⊙]) ∼12.8 with no evidence of evolution in the halo masses with redshift, contrary to some previous work. From considering models of halo mass growth rates, we predict that the SMGs will reside in haloes of mass log 10(M halo[{h-1,\rm M⊙]) ∼13.2 at z = 0, consistent with the expectation that the majority of z = 1.5-3 SMGs will evolve into present-day spheroidal galaxies. Finally, comparing to models of stellar-to-halo mass ratios, we show that SMGs may correspond to systems that are maximally efficient at converting their gas reservoirs into stars. We compare them to a simple model for gas cooling in haloes that suggests that the unique properties of the SMG population, including their high levels of star formation and their redshift distribution, are a result of the SMGs being the most massive galaxies that are still able to accrete cool gas from their surrounding intragalactic medium.
- Published
- 2021
157. Seasonal variation in the chemical composition and microbiological condition of Mediterranean horse mackerel ( Trachurus mediterraneus) muscle from the North Aegean Sea (Greece)
- Author
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Tzikas, Z., Amvrosiadis, I., Soultos, N., and Georgakis, Sp.
- Published
- 2007
- Full Text
- View/download PDF
158. The inhibitory potential of feed supplementation with rosemary and/or α-tocopheryl acetate on microbial growth and lipid oxidation of turkey breast during refrigerated storage
- Author
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Govaris, Alexandros, Florou-Paneri, Panagiota, Botsoglou, Evropi, Giannenas, Ilias, Amvrosiadis, Ioannis, and Botsoglou, Nikolaos
- Published
- 2007
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159. Designing Educational Activities for Preventing Social Exclusion of Refugee Children
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Emmanouil, Amvrosiadis, primary
- Published
- 2021
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160. The Counseling Role of Teachers in Education and its Importance
- Author
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Emmanouil, Amvrosiadis, primary
- Published
- 2021
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161. Intercultural Education – Obstacles and Prospects in Greece
- Author
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Emmanouil, Amvrosiadis, primary
- Published
- 2021
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- View/download PDF
162. An ALMA survey of the SCUBA-2 Cosmology Legacy Survey UKIDSS/UDS field: halo masses for submillimetre galaxies
- Author
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Stach, S M, primary, Smail, I, additional, Amvrosiadis, A, additional, Swinbank, A M, additional, Dudzevičiūtė, U, additional, Geach, J E, additional, Almaini, O, additional, Birkin, J E, additional, Chen, Chian-Chou, additional, Conselice, C J, additional, Cooke, E A, additional, Coppin, K E K, additional, Dunlop, J S, additional, Farrah, D, additional, Ikarashi, S, additional, Ivison, R J, additional, and Wardlow, J L, additional
- Published
- 2021
- Full Text
- View/download PDF
163. PyAutoLens: Open-Source Strong Gravitational Lensing
- Author
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Nightingale, James., primary, Hayes, Richard, additional, Kelly, Ashley, additional, Amvrosiadis, Aristeidis, additional, Etherington, Amy, additional, He, Qiuhan, additional, Li, Nan, additional, Cao, XiaoYue, additional, Frawley, Jonathan, additional, Cole, Shaun, additional, Enia, Andrea, additional, Frenk, Carlos, additional, Harvey, David, additional, Li, Ran, additional, Massey, Richard, additional, Negrello, Mattia, additional, and Robertson, Andrew, additional
- Published
- 2021
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164. Streaming Data Reorganization at Scale with DeltaFS Indexed Massive Directories
- Author
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Zheng, Qing, primary, Cranor, Charles D., additional, Jain, Ankush, additional, Ganger, Gregory R., additional, Gibson, Garth A., additional, Amvrosiadis, George, additional, Settlemyer, Bradley W., additional, and Grider, Gary, additional
- Published
- 2020
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165. Endoscopy Units and the Coronavirus Disease 2019 Outbreak: A Multicenter Experience From Italy
- Author
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Repici, Alessandro, primary, Pace, Fabio, additional, Gabbiadini, Roberto, additional, Colombo, Matteo, additional, Hassan, Cesare, additional, Dinelli, Marco, additional, Maselli, Roberta, additional, Spadaccini, Marco, additional, Mutignani, Massimiliano, additional, Gabbrielli, Armando, additional, Signorelli, Clementina, additional, Spada, Cristiano, additional, Leoni, Piera, additional, Fabbri, Carlo, additional, Segato, Sergio, additional, Gaffuri, Nicola, additional, Mangiavillano, Benedetto, additional, Radaelli, Franco, additional, Salerno, Raffaele, additional, Bargiggia, Stefano, additional, Maroni, Luca, additional, Benedetti, Antonio, additional, Occhipinti, Pietro, additional, De Grazia, Federico, additional, Ferraris, Luca, additional, Cengia, Gianpaolo, additional, Greco, Salvatore, additional, Alvisi, Costanza, additional, Scarcelli, Antonella, additional, De Luca, Luca, additional, Cereatti, Fabrizio, additional, Testoni, Pier Alberto, additional, Mingotto, Roberto, additional, Aragona, Giovanni, additional, Manes, Gianpiero, additional, Beretta, Paolo, additional, Amvrosiadis, Georgios, additional, Cennamo, Vincenzo, additional, Lella, Fausto, additional, Missale, Guido, additional, Lagoussis, Pavlos, additional, Triossi, Omero, additional, Giovanardi, Mauro, additional, De Roberto, Giuseppe, additional, Cantù, Paolo, additional, Buscarini, Elisabetta, additional, Anderloni, Andrea, additional, Carrara, Silvia, additional, Fugazza, Alessandro, additional, Galtieri, Piera Alessia, additional, Pellegatta, Gaia, additional, Antonelli, Giulio, additional, Rösch, Thomas, additional, and Sharma, Prateek, additional
- Published
- 2020
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166. The Case for Custom Storage Backends in Distributed Storage Systems
- Author
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Aghayev, Abutalib, primary, Weil, Sage, additional, Kuchnik, Michael, additional, Nelson, Mark, additional, Ganger, Gregory R., additional, and Amvrosiadis, George, additional
- Published
- 2020
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167. forward-modelling method to infer the dark matter particle mass from strong gravitational lenses.
- Author
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He, Qiuhan, Robertson, Andrew, Nightingale, James, Cole, Shaun, Frenk, Carlos S, Massey, Richard, Amvrosiadis, Aristeidis, Li, Ran, Cao, Xiaoyue, and Etherington, Amy
- Subjects
DARK matter ,SPACE telescopes ,SIGNAL-to-noise ratio ,COSMOGONY ,SPATIAL resolution ,GRAVITATIONAL lenses - Abstract
A fundamental prediction of the cold dark matter (CDM) model of structure formation is the existence of a vast population of dark matter haloes extending to subsolar masses. By contrast, other dark matter models, such as a warm thermal relic (WDM), predict a cutoff in the mass function at a mass which, for popular models, lies approximately between 10
7 and |$10^{10}\, {\rm M}_\odot$|. We use mock observations to demonstrate the viability of a forward modelling approach to extract information about low-mass dark haloes lying along the line of sight to galaxy–galaxy strong lenses. This can be used to constrain the mass of a thermal relic dark matter particle, mDM . With 50 strong lenses at Hubble Space Telescope resolution and a maximum pixel signal-to-noise ratio of ∼50, the expected median 2σ constraint for a CDM-like model (with a halo mass cutoff at |$10^{7}\, {\rm M}_\odot$|) is |$m_\mathrm{DM} \gt 4.10 \, \mathrm{keV}$| (50 per cent chance of constraining mDM to be better than 4.10 keV). If, however, the dark matter is a warm particle of |$m_\mathrm{DM}=2.2 \, \mathrm{keV}$| , our 'approximate Bayesian computation' method would result in a median estimate of mDM between 1.43 and 3.21 keV. Our method can be extended to the large samples of strong lenses that will be observed by future telescopes and could potentially rule out the standard CDM model of cosmogony. To aid future survey design, we quantify how these constraints will depend on data quality (spatial resolution and integration time) as well as on the lensing geometry (source and lens redshifts). [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
168. bright extragalactic ALMA redshift survey (BEARS) I: redshifts of bright gravitationally lensed galaxies from the Herschel ATLAS.
- Author
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Urquhart, S A, Bendo, G J, Serjeant, S, Bakx, T, Hagimoto, M, Cox, P, Neri, R, Lehnert, M, Sedgwick, C, Weiner, C, Dannerbauer, H, Amvrosiadis, A, Andreani, P, Baker, A J, Beelen, A, Berta, S, Borsato, E, Buat, V, Butler, K M, and Cooray, A
- Subjects
REDSHIFT ,GALAXIES ,SUBMILLIMETER astronomy ,GALACTIC redshift ,GALAXY clusters - Abstract
We present spectroscopic measurements for 71 galaxies associated with 62 of the brightest high-redshift submillimetre sources from the Southern fields of the Herschel Astrophysical Terahertz Large Area Survey (H-ATLAS), while targeting 85 sources which resolved into 142. We have obtained robust redshift measurements for all sources using the 12-m Array and an efficient tuning of ALMA to optimize its use as a redshift hunter, with 73 per cent of the sources having a robust redshift identification. Nine of these redshift identifications also rely on observations from the Atacama Compact Array. The spectroscopic redshifts span a range 1.41 < z < 4.53 with a mean value of 2.75, and the CO emission line full-width at half-maxima range between |$\rm 110\, km\, s^{-1} \lt FWHM \lt 1290\, km\, s^{-1}$| with a mean value of ∼500 km s
−1 , in line with other high- z samples. The derived CO(1-0) luminosity is significantly elevated relative to line-width to CO(1-0) luminosity scaling relation, which is suggestive of lensing magnification across our sources. In fact, the distribution of magnification factors inferred from the CO equivalent widths is consistent with expectations from galaxy–galaxy lensing models, though there is a hint of an excess at large magnifications that may be attributable to the additional lensing optical depth from galaxy groups or clusters. [ABSTRACT FROM AUTHOR]- Published
- 2022
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169. A forward-modelling method to infer the dark matter particle mass from strong gravitational lenses
- Author
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Qiuhan He, Andrew Robertson, James Nightingale, Shaun Cole, Carlos S Frenk, Richard Massey, Aristeidis Amvrosiadis, Ran Li, Xiaoyue Cao, and Amy Etherington
- Subjects
Cosmology and Nongalactic Astrophysics (astro-ph.CO) ,010308 nuclear & particles physics ,Space and Planetary Science ,0103 physical sciences ,FOS: Physical sciences ,Astronomy and Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,010303 astronomy & astrophysics ,01 natural sciences ,Astrophysics::Galaxy Astrophysics ,Astrophysics - Cosmology and Nongalactic Astrophysics - Abstract
A fundamental prediction of the cold dark matter (CDM) model of structure formation is the existence of a vast population of dark matter haloes extending to subsolar masses. By contrast, other dark matter models, such as a warm thermal relic (WDM), predict a cutoff in the mass function at a mass which, for popular models, lies approximately between $10^7$ and $10^{10}~{\rm M}_\odot$. We use mock observations to demonstrate the viability of a forward modelling approach to extract information about low-mass dark haloes lying along the line-of-sight to galaxy-galaxy strong lenses. This can be used to constrain the mass of a thermal relic dark matter particle, $m_\mathrm{DM}$. With 50 strong lenses at Hubble Space Telescope resolution and a maximum pixel signal-to-noise ratio of $\sim50$, the expected median 2$\sigma$ constraint for a CDM-like model (with a halo mass cutoff at $10^{7}~{\rm M}_\odot$) is $m_\mathrm{DM} > 4.10 \, \mathrm{keV}$ (50% chance of constraining $m_{\rm DM}$ to be better than 4.10 keV). If, however, the dark matter is a warm particle of $m_\mathrm{DM}=2.2 \, \mathrm{keV}$, our 'Approximate Bayesian Computation' method would result in a median estimate of $m_\mathrm{DM}$ between 1.43 and 3.21 keV. Our method can be extended to the large samples of strong lenses that will be observed by future telescopes, and could potentially rule out the standard CDM model of cosmogony. To aid future survey design, we quantify how these constraints will depend on data quality (spatial resolution and integration time) as well as on the lensing geometry (source and lens redshifts)., Comment: Accepted by MNRAS. Comments welcome
- Published
- 2020
- Full Text
- View/download PDF
170. Endoscopy units and the COVID-19 Outbreak: A Multi-Center Experience from Italy
- Author
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Repici, A, Pace, F, Gabbiadini, R, Colombo, M, Hassan, C, Dinelli, M, Maselli, R, Spadaccini, M, Mutignani, M, Gabbrielli, A, Signorelli, C, Spada, C, Leoni, P, Fabbri, C, Segato, S, Gaffuri, N, Mangiavillano, B, Radaelli, F, Salerno, R, Bargiggia, S, Maroni, L, Benedetti, A, Occhipinti, P, De Grazia, F, Ferraris, L, Cengia, G, Greco, S, Alvisi, C, Scarcelli, A, De Luca, L, Cereatti, F, Testoni, Pa, Mingotto, R, Aragona, G, Manes, G, Beretta, P, Amvrosiadis, G, Cennamo, V, Lella, F, Missale, G, Lagoussis, P, Triossi, O, Giovanardi, M, De Roberto, G, Canto, P, Buscarini, E, Anderloni, A, Carrara, S, Fugazza, A, Galtieri, Pa, Pellegatta, G, Antonelli, G, Rosch, T, and Sharma, P
- Subjects
Coronavirus ,Pandemic ,Survery ,COVID-19 ,Endoscopy - Published
- 2020
171. Progressive Compressed Records: Taking a Byte out of Deep Learning Data
- Author
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George Amvrosiadis, Virginia Smith, and Michael Kuchnik
- Subjects
FOS: Computer and information sciences ,Computer Science - Machine Learning ,business.industry ,Computer science ,Deep learning ,General Engineering ,Byte ,Machine Learning (stat.ML) ,Machine Learning (cs.LG) ,Statistics - Machine Learning ,Bandwidth (computing) ,Artificial intelligence ,business ,Commodity (Marxism) ,Computer network - Abstract
Deep learning accelerators efficiently train over vast and growing amounts of data, placing a newfound burden on commodity networks and storage devices. A common approach to conserve bandwidth involves resizing or compressing data prior to training. We introduce Progressive Compressed Records (PCRs), a data format that uses compression to reduce the overhead of fetching and transporting data, effectively reducing the training time required to achieve a target accuracy. PCRs deviate from previous storage formats by combining progressive compression with an efficient storage layout to view a single dataset at multiple fidelities---all without adding to the total dataset size. We implement PCRs and evaluate them on a range of datasets, training tasks, and hardware architectures. Our work shows that: (i) the amount of compression a dataset can tolerate exceeds 50% of the original encoding for many DL training tasks; (ii) it is possible to automatically and efficiently select appropriate compression levels for a given task; and (iii) PCRs enable tasks to readily access compressed data at runtime--- utilizing as little as half the training bandwidth and thus potentially doubling training speed.
- Published
- 2019
172. Compact Filters for Fast Online Data Partitioning
- Author
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Charles D. Cranor, Qing Zheng, Ankush Jain, Bradley W. Settlemyer, Gary Grider, Gregory R. Ganger, Garth A. Gibson, and George Amvrosiadis
- Subjects
Software ,business.industry ,Computer science ,Data management ,Search engine indexing ,Scalability ,Parallel computing ,Load balancing (computing) ,business - Abstract
We are approaching a point in time when it will be infeasible to catalog and query data after it has been generated. This trend has fueled research on in-situ data processing (i.e. operating on data as it is streamed to storage). One important example of this approach is in-situ data indexing. Prior work has shown the feasibility of indexing at scale as a two-step process. First, one partitions data by key across the CPU cores of a parallel job. Then each core indexes its subset as data is persisted. Online partitioning requires transferring data over the network so that it can be indexed and stored by the core responsible for the data. This approach is becoming increasingly costly as new computing platforms emphasize parallelism instead of individual core performance that is crucial for communication libraries and systems software in general. In addition to indexing, scalable online data partitioning is also useful in other contexts such as load balancing and efficient compression.We present FilterKV, an efficient data management scheme for fast online data partitioning of key-value (KV) pairs. FilterKV reduces the total amount of data sent over the network and to storage. We achieve this by: (a) partitioning pointers to KV pairs instead of the KV pairs themselves and (b) using a compact format to represent and store KV pointers. Results from LANL show that FilterKV can reduce total write slowdown (including partitioning overhead) by up to 3x across 4096 CPU cores.
- Published
- 2019
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173. Parametric copula models reveal neuronal and behavioral time-dependent relationships in primary visual cortex
- Author
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Kudryashova, Nina, Amvrosiadis, Theoklitos, Dupuy, Nathalie, Rochefort, Nathalie, and Onken, Arno
- Subjects
Computational Neuroscience ,Data analysis, machine learning, neuroinformatics - Published
- 2019
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- View/download PDF
174. A Software Defined Storage Approach to Exascale Storage Services. Final Technical Report
- Author
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Neil Fortner, Robert Latham, Galen M. Shipman, George Amvrosiadis, Shane Snyder, Matthieu Dorier, D. Robinson, Charles D. Cranor, Robert Ross, Philip Carns, Bradley W. Settlemyer, David Rich, Jerome Soumagne, Greg Ganger, and Qing Zheng
- Subjects
Computer science ,Systems engineering ,Technical report ,Software-defined storage - Published
- 2019
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- View/download PDF
175. Insertion of long-term tunneled cuffed hemodialysis catheters via the external jugular vein by using a simple, safe and reliable surgical technique
- Author
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SKANDALOS, I., AMVROSIADIS, D., FILIPPIDIS, A., SIOULIS, A., TSITSIOS, T., MAVROMATIDIS, K., and HATZIBALOGLOU, A.
- Published
- 2007
176. Endoscopy Units and the Coronavirus Disease 2019 Outbreak: A Multicenter Experience From Italy
- Author
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Repici, A., Pace, F., Gabbiadini, R., Colombo, M., Hassan, Cesare, Dinelli, M., Maselli, R., Spadaccini, M., Mutignani, Massimiliano, Gabbrielli, A., Signorelli, C., Spada, Cristiano, Leoni, Paola, Fabbri, Carlo, Segato, S., Gaffuri, N., Mangiavillano, B., Radaelli, F., Salerno, R., Bargiggia, S., Maroni, L., Benedetti, A., Occhipinti, P., De Grazia, F., Ferraris, L., Cengia, G., Greco, Sara, Alvisi, C., Scarcelli, A., De Luca, L., Cereatti, F., Testoni, P. A., Mingotto, R., Aragona, G., Manes, G., Beretta, P., Amvrosiadis, G., Cennamo, Vincenzo, Lella, F., Missale, G., Lagoussis, P., Triossi, O., Giovanardi, Mattia, De Roberto, G., Cantu, P., Buscarini, E., Anderloni, A., Carrara, S., Fugazza, A., Galtieri, P. A., Pellegatta, G., Antonelli, G., Rosch, T., Sharma, P., Hassan C., Mutignani M. (ORCID:0000-0002-1272-4888), Spada C. (ORCID:0000-0002-5692-0960), Leoni P., Fabbri C., Greco S., Cennamo V., Giovanardi M., Repici, A., Pace, F., Gabbiadini, R., Colombo, M., Hassan, Cesare, Dinelli, M., Maselli, R., Spadaccini, M., Mutignani, Massimiliano, Gabbrielli, A., Signorelli, C., Spada, Cristiano, Leoni, Paola, Fabbri, Carlo, Segato, S., Gaffuri, N., Mangiavillano, B., Radaelli, F., Salerno, R., Bargiggia, S., Maroni, L., Benedetti, A., Occhipinti, P., De Grazia, F., Ferraris, L., Cengia, G., Greco, Sara, Alvisi, C., Scarcelli, A., De Luca, L., Cereatti, F., Testoni, P. A., Mingotto, R., Aragona, G., Manes, G., Beretta, P., Amvrosiadis, G., Cennamo, Vincenzo, Lella, F., Missale, G., Lagoussis, P., Triossi, O., Giovanardi, Mattia, De Roberto, G., Cantu, P., Buscarini, E., Anderloni, A., Carrara, S., Fugazza, A., Galtieri, P. A., Pellegatta, G., Antonelli, G., Rosch, T., Sharma, P., Hassan C., Mutignani M. (ORCID:0000-0002-1272-4888), Spada C. (ORCID:0000-0002-5692-0960), Leoni P., Fabbri C., Greco S., Cennamo V., and Giovanardi M.
- Abstract
Up to 20% of health care personnel (HCP) were found to be infected with coronavirus disease (COVID-19)1 in the outbreak in northern Italy.2 Recommendations on patient and HCP protection have been made, such as postponing procedures, triage, use of personal protective equipment (PPE), and creation of differentiated in-hospital pathways.3,4 However, several barriers against the adoption of these strategies exist, including cultural factors and shortages of medical resources; therefore, there are few reports of real-world experiences and outcomes with their adoption.5 The aim of this survey was to investigate the burden of COVID-19 on endoscopic activity in a high-risk area of COVID-19 outbreak, approaches to evaluating patients, adoption and compliance of HCP with protective measures, and initial possible viral transmission outcomes from endoscopy units within a large, community-based setting (both between patients and HCP and between HCP).
- Published
- 2020
177. Halo concentration strengthens dark matter constraints in galaxy–galaxy strong lensing analyses.
- Author
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Amorisco, Nicola C, Nightingale, James, He, Qiuhan, Amvrosiadis, Aristeidis, Cao, Xiaoyue, Cole, Shaun, Etherington, Amy, Frenk, Carlos S, Li, Ran, Massey, Richard, and Robertson, Andrew
- Subjects
DARK matter ,GRAVITATIONAL lenses ,GALACTIC halos ,MAGNITUDE (Mathematics) - Abstract
A defining prediction of the cold dark matter cosmological model is the existence of a very large population of low-mass haloes. This population is absent in models in which the dark matter particle is warm (WDM). These alternatives can, in principle, be distinguished observationally because haloes along the line of sight can perturb galaxy–galaxy strong gravitational lenses. Furthermore, the WDM particle mass could be deduced because the cut-off in their halo mass function depends on the mass of the particle. We systematically explore the detectability of low-mass haloes in WDM models by simulating and fitting mock lensed images. Contrary to previous studies, we find that haloes are harder to detect when they are either behind or in front of the lens. Furthermore, we find that the perturbing effect of haloes increases with their concentration: Detectable haloes are systematically high-concentration haloes, and accounting for the scatter in the mass–concentration relation boosts the expected number of detections by as much as an order of magnitude. Haloes have lower concentration for lower particle masses and this further suppresses the number of detectable haloes beyond the reduction arising from the lower halo abundances alone. Taking these effects into account can make lensing constraints on the value of the mass function cut-off at least an order of magnitude more stringent than previously appreciated. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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- View/download PDF
178. Systematic Errors Induced by the Elliptical Power-law model in Galaxyâ€"Galaxy Strong Lens Modeling.
- Author
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Cao, Xiaoyue, Li, Ran, Nightingale, J. W., Massey, Richard, Robertson, Andrew, Frenk, Carlos S., Amvrosiadis, Aristeidis, Amorisco, Nicola C., He, Qiuhan, Etherington, Amy, Cole, Shaun, and Zhu, Kai
- Published
- 2022
- Full Text
- View/download PDF
179. Superior Mesenteric Artery Syndrome: Clinical, Endoscopic, and Radiological Findings
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Sergio Testai, Valentina Guarnotta, Vittorio Virgilio, Dario Raimondo, Melania Blasco, Massimo Midiri, Gaetano Cristian Morreale, Emanuele Sinagra, Massimo Galia, Valerio Alaimo, Federico Midiri, Vincenzo Mastrella, Angelo Leone, Marcello Giuseppe Spampinato, Roberto Lagalla, Francesco Cappello, Georgios Amvrosiadis, Guido Martorana, Marta Marasa, Dario Sorrentino, Domenico Albano, Francesca Rossi, Giovanni Albano, Giovanni Tomasello, Valentina Bova, Sinagra, Emanuele, Raimondo, Dario, Albano, Domenico, Guarnotta, Valentina, Blasco, Melania, Testai, Sergio, Marasà, Marta, Mastrella, Vincenzo, Alaimo, Valerio, Bova, Valentina, Albano, Giovanni, Sorrentino, Dario, Tomasello, Giovanni, Cappello, Francesco, Leone, Angelo, Rossi, Francesca, Galia, Massimo, Lagalla, Roberto, Midiri, Federico, Morreale, Gaetano Cristian, Amvrosiadis, Georgio, Martorana, Guido, Spampinato, Marcello Giuseppe, Virgilio, Vittorio, and Midiri, Massimo
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medicine.medical_specialty ,Article Subject ,03 medical and health sciences ,0302 clinical medicine ,Weight loss ,Internal medicine ,medicine.artery ,medicine ,Superior mesenteric artery ,lcsh:RC799-869 ,Prospective cohort study ,Settore MED/12 - Gastroenterologia ,Hepatology ,business.industry ,Gastroenterology ,medicine.disease ,SMA ,Settore MED/18 - Chirurgia Generale ,030220 oncology & carcinogenesis ,030211 gastroenterology & hepatology ,lcsh:Diseases of the digestive system. Gastroenterology ,Radiology ,superior mesenteryc artery syndrome, endoscopic finding, radiological aspects ,Presentation (obstetrics) ,medicine.symptom ,business ,Body mass index ,Superior mesenteric artery syndrome - Abstract
Background. The superior mesenteric artery (SMA) syndrome is a rare entity presenting with upper gastrointestinal tract obstruction and weight loss. Studies to determine the optimal methods of diagnosis and treatment are required. Aims and Methods. This study aims at analyzing the clinical presentation, diagnosis, and management of SMA syndrome. Ten cases of SMA syndrome out of 2074 esophagogastroduodenoscopies were suspected. A contrast-enhanced computed tomography (CECT) scan was performed to confirm the diagnosis. After, a gastroenterologist and a nutritionist personalized the therapy. Furthermore, we compared the demographical, clinical, endoscopic, and radiological parameters of these cases with a control group consisting of 10 cases out of 2380 EGDS of initially suspected (but not radiologically confirmed) SMA over a follow-up 2-year period (2015-2016). Results. The prevalence of SMA syndrome was 0.005%. Median age and body mass index were 23.5 years and 21.5 kg/m2, respectively. Symptoms developed between 6 and 24 months. Median aortomesenteric angle and aorta-SMA distance were 22 and 6 mm, respectively. All patients improved on conservative treatment. In our series, a marked (>5 kg) weight loss (p=0.006) and a long-standing presentation (more than six months in 80% of patients) (p=0.002) are significantly related to a diagnosis of confirmed SMA syndrome at CECT after an endoscopic suspicion. A “resembling postprandial distress syndrome dyspepsia” presentation may be helpful to the endoscopist in suspecting a latent SMA syndrome (p=0.02). The narrowing of both the aortomesenteric angle (p=0.001) and the aortomesenteric distance (p<0.001) was significantly associated with the diagnosis of SMA after an endoscopic suspicion; however, the narrowing of the aortomesenteric distance seemed to be more accurate, rather than the narrowing of the aortomesenteric angle. Conclusion. SMA syndrome represents a diagnostic and therapeutic challenge. Our results show the following findings: the importance of the endoscopic suspicion of SMA syndrome; the preponderance of a long-standing and chronic onset; a female preponderance; the importance of the nutritional counseling for the treatment; no need of surgical intervention; and better diagnostic accuracy of the narrowing of the aorta-SMA distance. Larger prospective studies are needed to clarify the best diagnosis and management of the SMA syndrome.
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- 2018
180. Raptor-Mediated Proteasomal Degradation of Deamidated 4E-BP2 Regulates Postnatal Neuronal Translation and NF-Kappa B Activity
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Petri Kursula, Mehdi Hooshmandi, Paul Skehel, Inês S. Amorim, Arkady Khoutorsky, Seyed Mehdi Jafarnejad, Konstanze Simbriger, Vinh Tai Truong, Agniete Kampaite, Stella Kouloulia, Gilliard Lach, Christos G. Gkogkas, Erik Ingmar-Hallin, and Theoklitos Amvrosiadis
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biology ,Chemistry ,Repressor ,Translation (biology) ,Human brain ,mTORC1 ,Ubiquitin ligase ,Cell biology ,medicine.anatomical_structure ,Ubiquitin ,Proteasome ,biology.protein ,medicine ,CUL4B - Abstract
The translation initiation repressor 4E-BP2 is deamidated in brain on asparagines N99/N102 during early postnatal brain development. This post-translational modification enhances 4E-BP2 association with Raptor, a central component of mTORC1 and alters the kinetics of excitatory synaptic transmission. We show that 4E-BP2 deamidation is neuron-specific, occurs in human brain and changes 4E-BP2 subcellular localisation, but not its disordered structure state. We demonstrate that deamidated 4E-BP2 is ubiquitinated more and degrades faster than the unmodified protein. We find that enhanced deamidated 4E-BP2 degradation is dependent on Raptor binding, concomitant with increased association with a Raptor-CUL4B E3 ubiquitin ligase complex. Deamidated 4E-BP2 stability is promoted by inhibiting mTORC1 or AMPARs, but not NMDARs. We further demonstrate that deamidated 4E-BP2 regulates the translation of a distinct pool of mRNAs linked to cerebral development, mitochondria and NF-κB activity, and thus may be crucial for postnatal brain development in neurodevelopmental disorders, such as ASD.
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- 2019
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181. A search for the lenses in the Herschel Bright Sources (HerBS) sample
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Bakx, Tom J L C, primary, Eales, Stephen, additional, and Amvrosiadis, Aristeidis, additional
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- 2020
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182. Mochi: Composing Data Services for High-Performance Computing Environments
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Ross, Robert B., primary, Amvrosiadis, George, additional, Carns, Philip, additional, Cranor, Charles D., additional, Dorier, Matthieu, additional, Harms, Kevin, additional, Ganger, Greg, additional, Gibson, Garth, additional, Gutierrez, Samuel K., additional, Latham, Robert, additional, Robey, Bob, additional, Robinson, Dana, additional, Settlemyer, Bradley, additional, Shipman, Galen, additional, Snyder, Shane, additional, Soumagne, Jerome, additional, and Zheng, Qing, additional
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- 2020
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183. Scaling Embedded In-Situ Indexing with DeltaFS
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Garth A. Gibson, Fan Guo, Bradley W. Settlemyer, Charles D. Cranor, Danhao Guo, Qing Zheng, Gary Grider, George Amvrosiadis, and Gregory R. Ganger
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Speedup ,Computer science ,Search engine indexing ,020206 networking & telecommunications ,020207 software engineering ,02 engineering and technology ,Data modeling ,Computer engineering ,Scalability ,0202 electrical engineering, electronic engineering, information engineering ,Code (cryptography) ,Overhead (computing) ,Point (geometry) ,Scaling - Abstract
Analysis of large-scale simulation output is a core element of scientific inquiry, but analysis queries may experience significant I/O overhead when the data is not structured for efficient retrieval. While in-situ processing allows for improved time-to-insight for many applications, scaling in-situ frameworks to hundreds of thousands of cores can be difficult in practice. The DeltaFS in-situ indexing is a new approach for in-situ processing of massive amounts of data to achieve efficient point and small-range queries. This paper describes the challenges and lessons learned when scaling this in-situ processing function to hundreds of thousands of cores. We propose techniques for scalable all-to-all communication that is memory and bandwidth efficient, concurrent indexing, and specialized LSM-Tree formats. Combining these techniques allows DeltaFS to control the cost of in-situ processing while maintaining 3 orders of magnitude query speedup when scaling alongside the popular VPIC particle-in-cell code to 131,072 cores.
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- 2018
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184. Raptor-Mediated Proteasomal Degradation of Deamidated 4E-BP2 Regulates Postnatal Neuronal Translation and NF-κB Activity
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Kouloulia, Stella, primary, Hallin, Erik I., additional, Simbriger, Konstanze, additional, Amorim, Inês S., additional, Lach, Gilliard, additional, Amvrosiadis, Theoklitos, additional, Chalkiadaki, Kleanthi, additional, Kampaite, Agniete, additional, Truong, Vinh Tai, additional, Hooshmandi, Mehdi, additional, Jafarnejad, Seyed Mehdi, additional, Skehel, Paul, additional, Kursula, Petri, additional, Khoutorsky, Arkady, additional, and Gkogkas, Christos G., additional
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- 2019
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185. File systems unfit as distributed storage backends
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Aghayev, Abutalib, primary, Weil, Sage, additional, Kuchnik, Michael, additional, Nelson, Mark, additional, Ganger, Gregory R., additional, and Amvrosiadis, George, additional
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- 2019
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186. Compact Filters for Fast Online Data Partitioning
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Zheng, Qing, primary, Cranor, Charles D., additional, Jain, Ankush, additional, Ganger, Gregory R., additional, Gibson, Garth A., additional, Amvrosiadis, George, additional, Settlemyer, Bradley W., additional, and Grider, Gary, additional
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- 2019
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187. P.05.24 WHAT DOES A ILEOCOLONIC WALL THICKENING MEAN? RESULTS FROM A RETROSPECTIVE STUDY
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Sinagra, E., primary, Albano, D., additional, Maida, M., additional, Linea, C., additional, Amvrosiadis, G., additional, Rossi, F., additional, Pellegrino, S., additional, Purpura, P., additional, Grassedonio, E., additional, Marasà, M., additional, Testai, S., additional, Bova, V., additional, Galia, M., additional, Lagalla, R., additional, Midiri, F., additional, Midiri, M., additional, Albano, G., additional, and Raimondo, D., additional
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- 2019
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188. NEW THERAPEUTIC PERSPECTIVES IN IRRITABLE BOWEL SYNDROME: TARGETING LOW-GRADE INFLAMMATION, IMMUNO-NEUROENDOCRINE AXIS, MOTILITY, SDECRETION AND BEYOND
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Giovanni Tomasello, Valentina Guarnotta, Georgios Amvrosiadis, Gaetano Cristian Morreale, Ghazaleh Mohammadian, Francesca Rossi, Dario Raimondo, Francesco Cappello, Giorgio Fusco, Emanuele Sinagra, Sinagra, E., Morreale, G., Mohammadian, G., Guarnotta, V., Tomasello, G., Cappello, F., Rossi, F., Amvrosiadis, G., and Raimondo, D.
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Abdominal pain ,medicine.medical_specialty ,Review ,Functional disorder ,Gastroenterology ,Permeability ,Bile Acids and Salts ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Gastrointestinal Agents ,Mesalazine ,Internal medicine ,Immunoendocrine axis ,Therapy ,Low grade inflammation ,Motility ,Secretion ,Irritable bowel syndrome ,medicine ,Humans ,Inflammation ,Clinical Trials as Topic ,Gastrointestinal agent ,Settore MED/12 - Gastroenterologia ,Intestinal permeability ,business.industry ,Drugs, Investigational ,General Medicine ,medicine.disease ,Abdominal Pain ,Rifaximin ,Intestines ,Clinical trial ,Settore MED/18 - Chirurgia Generale ,Treatment Outcome ,chemistry ,030220 oncology & carcinogenesis ,030211 gastroenterology & hepatology ,medicine.symptom ,Gastrointestinal Motility ,business - Abstract
Irritable bowel syndrome (IBS) is a chronic, recurring, and remitting functional disorder of the gastrointestinal tract characterized by abdominal pain, distention, and changes in bowel habits. Although there are several drugs for IBS, effective and approved treatments for one or more of the symptoms for various IBS subtypes are needed. Improved understanding of pathophysiological mechanisms such as the role of impaired bile acid metabolism, neurohormonal regulation, immune, dysfunction, the epithelial barrier and the secretory properties of the gut has led to advancements in the treatment of IBS. With regards to therapies for restoring intestinal permeability, multiple studies with prebiotics and probiotics are ongoing, even if to date their efficacy has been limited. In parallel, much progress has been made in targeting low-grade inflammation, especially through the introduction of drugs such as mesalazine and rifaximin, even if a better knowledge of the mechanisms underlying the low-grade inflammation in IBS may allow the design of clinical trials that test the efficacy and safety of such drugs. This literature review aims to summarize the findings related to new and investigational therapeutic agents for IBS, most recently developed in preclinical as well as Phase 1 and Phase 2 clinical studies.
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- 2017
189. The Herschel-ATLAS: a sample of 500 μm-selected lensed galaxies over 600 deg2
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Matthew Smith, Hooshang Nayyeri, J. Greenslade, Asantha Cooray, Elisabetta Valiante, G. Vernardos, R. S. Bussmann, Tom J. L. C. Bakx, Mark Allen, C. Furlanetto, Steve Serjeant, Lucia Marchetti, Nicola R. Napolitano, Loretta Dunne, Alain Omont, Aristeidis Amvrosiadis, Michał J. Michałowski, Léon V. E. Koopmans, Mattia Negrello, Mattia Vaccari, C. E. Petrillo, Julie Wardlow, Giovanni Covone, Helmut Dannerbauer, R. Hopwood, Andrew J. Baker, Stephen Anthony Eales, Luigi Danese, Maarten Baes, G. A. Verdoes Kleijn, Rob Ivison, S. Amber, Simon Dye, Dominik Riechers, Nathan Bourne, P. van der Werf, Steven M. Crawford, Crescenzo Tortora, David L. Clements, Hai Fu, Steve Maddox, Andrea Lapi, G. de Zotti, J. González-Nuevo, Mark Gurwell, Zhen-Yi Cai, Astronomy, Negrello, M., Amber, S., Amvrosiadis, A., Cai, Z. -Y., Lapi, A., Gonzalez-Nuevo, J., DE ZOTTIS, Federico, Furlanetto, Federica, Maddox, S. J., Allen, M., Bakx, T., Bussmann, R. S., Cooray, A., Covone, G., Danese, L., Dannerbauer, H., Fu, H., Greenslade, J., Gurwell, M., Hopwood, R., Koopmans, L. V. E., Napolitano, N., Nayyeri, H., Omont, A., Petrillo, C. E., Riechers, D. A., Serjeant, S., Tortora, C., Valiante, E., Verdoes Kleijn, G., Vernardos, G., Wardlow, J. L., Baes, M., Baker, A. J., Bourne, N., Clements, D., Crawford, S. M., Dye, S., Dunne, L., Eales, S., Ivison, R. J., Marchetti, L., Michalowski, M. J., Smith, M. W. L., Vaccari, M., and van der Werf, P.
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redshift submillimetre ,galaxies: high ,Astrophysics ,strong [Gravitational lensing] ,01 natural sciences ,law.invention ,galaxies [Submillimetre] ,high-redshift [Galaxies] ,law ,galaxies: high-redshift ,galaxies ,DARK-MATTER SUBSTRUCTURE ,010303 astronomy & astrophysics ,QB ,Physics ,Line-of-sight ,gravitational lensing: strong ,gravitational lensing: strong – galaxies: evolution – galaxies: high-redshift – submillimetre: galaxies ,Lens (optics) ,RESOLUTION ALMA OBSERVATIONS ,South Pole Telescope ,Physical Sciences ,Submillimetre: galaxie ,galaxies: evolution ,submillimetre: galaxies ,DATA RELEASE ,Magnification ,Astrophysics::Cosmology and Extragalactic Astrophysics ,Astronomy & Astrophysics ,Settore FIS/05 - Astronomia e Astrofisica ,0103 physical sciences ,STAR-FORMING GALAXIES ,DEEP FIELD-SOUTH ,Astrophysics::Galaxy Astrophysics ,Luminous infrared galaxy ,Science & Technology ,SOUTH-POLE TELESCOPE ,SUBMILLIMETER GALAXIES ,high [galaxies] ,010308 nuclear & particles physics ,Astronomy ,Astronomy and Astrophysics ,Astronomy and Astrophysic ,evolution [Galaxies] ,LUMINOUS INFRARED GALAXIES ,Redshift ,Galaxy ,GRAVITATIONAL LENSES ,0201 Astronomical And Space Sciences ,Gravitational lens ,Physics and Astronomy ,Space and Planetary Science ,REDSHIFT DISTRIBUTION - Abstract
JG-N acknowledges financial support from the Spanish MINECO for a ‘Ramon y Cajal’ fellowship (RYC-2013-13256) and the I+D 2015 project AYA2015-65887-P (MINECO/FEDER). LD, RJI and SJM acknowledge support from the European Re- search Council Advanced Investigator grant, COSMICISM, Negrello, M., Amber, S., Amvrosiadis, A., Cai, Z.-Y., Lapi, A., Gonzalez-Nuevo, J., De Zotti, G., Furlanetto, C., Maddox, S.J., Allen, M., Bakx, T., Bussmann, R.S., Cooray, A., Covone, G., Danese, L., Dannerbauer, H., Fu, H., Greenslade, J., Gurwell, M., Hopwood, R., Koopmans, L.V.E., Napolitano, N., Nayyeri, H., Omont, A., Petrillo, C.E., Riechers, D.A., Serjeant, S., Tortora, C., Valiante, E., Verdoes Kleijn, G., Vernardos, G., Wardlow, J.L., Baes, M., Baker, A.J., Bourne, N., Clements, D., Crawford, S.M., Dye, S., Dunne, L., Eales, S., Ivison, R.J., Marchetti, L., Michalowski, M.J., Smith, M.W.L., Vaccari, M., van der Werf, P.
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- 2017
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190. AMYLOIDOSIS AND INFLAMMATORY BOWEL DISEASE: FACT OR MITH?
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Sinagra,E, Ciofalo, M, Morreale, GC, Amvrosiadis,G, Damiani,P, Damiani,F, Pompei,G, Rizzo,AG, Canale,C, Mastrocinque,G, Raimondo D., TOMASELLO, Giovanni, CAPPELLO, Francesco, CARINI, Francesco, Sinagra,E, Ciofalo, M, Tomasello,G, Cappello,F, Morreale, GC, Amvrosiadis,G, Damiani,P, Damiani,F, Pompei,G, Rizzo,AG, Canale,C, Mastrocinque,G, Carini,F, and Raimondo D
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Settore MED/18 - Chirurgia Generale ,Settore MED/12 - Gastroenterologia ,Crohn' disease, Ulcerative Colitis, Amyloidisis, IBD - Abstract
Inflammatory Bowel Disease (IBD), which includes both Crohn's Disease (CD) and Ulcerative Colitis (UC), is a chronic idiopathic inflammatory disorder affecting the gastrointestinal tract. Extraintestinal manifestations (EIM) are common in patients with IBD, and occur in 6-47% of patients with CD or UC. EIM can involve organs other than the gastrointestinal tract such as skin, eyes, joints, biliary tract and kidneis. Renal and urinary involvement particularly occurs in 4-23% of patients with IBD. Among the renal complications of IBD, seconfary amyloidosis (AA-type, AAA) is a rare but serious complication. renal amyloidosis has been proven to be the most common lethal manifestation of IBD-associated amyloidosis, since renal involvement rapidly leads to end-stage renal failure. A few studies suggest that AAA is more prevalent in CD than in UC, mainly occurring in male patients with an extensive long-lasting and penetrating ddisease pattern. The therapeutic approaches of IBD-associated AAA are based both on control of the chronic inflammatory process that causes the production and storage of serum amyloid A (SAA), which is a precursor of the amyloid, as well as on destabilizing amyloid fibrils so that they can no longer maintain their pleated sheet configuration; however, in patients with end-stage renal disease, the only therapeutic options still available are hemodyalisis and renal transplantation. Whether effective treatment exists for AAA remain controversial.
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- 2017
191. Raptor-mediated proteasomal degradation of deamidated 4E-BP2 regulates postnatal neuronal translation and NF-κB activity
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Kouloulia, S. (Stella), Hallin, E. I. (Erik I.), Simbriger, K. (Konstanze), Amorim, I. S. (Inês S.), Lach, G. (Gilliard), Amvrosiadis, T. (Theoklitos), Chalkiadaki, K. (Kleanthi), Kampaite, A. (Agniete), Truong, V. T. (Vinh Tai), Hooshmandi, M. (Mehdi), Jafarnejad, S. M. (Seyed Mehdi), Skehel, P. (Paul), Kursula, P. (Petri), Khoutorsky, A. (Arkady), Gkogkas, C. G. (Christos G.), Kouloulia, S. (Stella), Hallin, E. I. (Erik I.), Simbriger, K. (Konstanze), Amorim, I. S. (Inês S.), Lach, G. (Gilliard), Amvrosiadis, T. (Theoklitos), Chalkiadaki, K. (Kleanthi), Kampaite, A. (Agniete), Truong, V. T. (Vinh Tai), Hooshmandi, M. (Mehdi), Jafarnejad, S. M. (Seyed Mehdi), Skehel, P. (Paul), Kursula, P. (Petri), Khoutorsky, A. (Arkady), and Gkogkas, C. G. (Christos G.)
- Abstract
Summary The translation initiation repressor 4E-BP2 is deamidated in the brain on asparagines N99/N102 during early postnatal brain development. This post-translational modification enhances 4E-BP2 association with Raptor, a central component of mTORC1 and alters the kinetics of excitatory synaptic transmission. We show that 4E-BP2 deamidation is neuron specific, occurs in the human brain, and changes 4E-BP2 subcellular localization, but not its disordered structure state. We demonstrate that deamidated 4E-BP2 is ubiquitinated more and degrades faster than the unmodified protein. We find that enhanced deamidated 4E-BP2 degradation is dependent on Raptor binding, concomitant with increased association with a Raptor-CUL4B E3 ubiquitin ligase complex. Deamidated 4E-BP2 stability is promoted by inhibiting mTORC1 or glutamate receptors. We further demonstrate that deamidated 4E-BP2 regulates the translation of a distinct pool of mRNAs linked to cerebral development, mitochondria, and NF-κB activity, and thus may be crucial for postnatal brain development in neurodevelopmental disorders, such as ASD.
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- 2019
192. Progressive Compressed Records: Taking a Byte out of Deep Learning Data
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Kuchnik, Michael, Amvrosiadis, George, Smith, Virginia, Kuchnik, Michael, Amvrosiadis, George, and Smith, Virginia
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Deep learning accelerators efficiently train over vast and growing amounts of data, placing a newfound burden on commodity networks and storage devices. A common approach to conserve bandwidth involves resizing or compressing data prior to training. We introduce Progressive Compressed Records (PCRs), a data format that uses compression to reduce the overhead of fetching and transporting data, effectively reducing the training time required to achieve a target accuracy. PCRs deviate from previous storage formats by combining progressive compression with an efficient storage layout to view a single dataset at multiple fidelities---all without adding to the total dataset size. We implement PCRs and evaluate them on a range of datasets, training tasks, and hardware architectures. Our work shows that: (i) the amount of compression a dataset can tolerate exceeds 50% of the original encoding for many DL training tasks; (ii) it is possible to automatically and efficiently select appropriate compression levels for a given task; and (iii) PCRs enable tasks to readily access compressed data at runtime---utilizing as little as half the training bandwidth and thus potentially doubling training speed.
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- 2019
193. Storage stability of vacuum-packaged hotsmoked Rainbow trout (Oncorhynchus mykiss) fillets: color and texture aspects
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ELEFTHERIADOU (Α. ΕΛΕΥΘΕΡΙΑΔΟΥ), A., VARELTZIS (Κ. ΒΑΡΕΛΤΖΗΣ), K., AMVROSIADIS (,1. ΑΜΒΡΟΣΙΑΔΗΣ), I., and GEORGAKIS (ΣΠ. ΓΕΩΡΓΑΚΗΣ), S.
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Καπνιστή πέστροφα ,σύσταση ,χρώμα ,συντήρηση - Abstract
Η ερευνητική αυτή εργασία είχε ως σκοπό τη διερεύνηση της δυνατότητας παραγωγής καπνιστών φιλέτων πέστροφας (Oncorhynchus my kiss) με έναν ικανοποιητικό ερυθρό χρωματισμό και καλή συνοχή και σύσταση καθώς και των προβλημάτων που παρατηρούνται κατά τη διάρκεια της συντήρησης των ετοίμων προϊόντων και σχετίζονται με τα παραπάνω χαρακτηριστικά. Παρήχθησαν φιλέτα με και χωρίς δέρμα, τα οποία αφοΰ αλατίσθηκαν και καπνίσθηκαν κάτω από ελεγχόμενες συνθήκες συσκευάστηκαν υπό κενό και συντηρήθηκαν για 120 ημέρες στους 2°C. Οι εξετάσεις των ετοίμων προϊόντων έγιναν αμέσως μετά την παραγωγή και επαναλήφθηκαν την 45η, 75η και 120η ημέρα. Συμφωνά με τα αποτελέσματα που προέκυψαν, μεταξύ των φιλέτων με δέρμα και χωρίς δέρμα δεν παρατηρήθηκε καμιά σημαντική διαφορά ως προς την περιεκτικότητα τους σε καροτένια και ρετινόλη. Από 0,4-0,5 και 0.08-0,10 μg/g που ήταν αυτή αντίστοιχα την 1η ημέρα μειώθηκε σε 0,2 και 0,04 μg/g την 45η και στη συνέχεια παρέμεινε αμετάβλητη μέχρι το τέλος της συντήρησης. Οι τιμές όμως αυτές απεδείχθησαν επαρκείς γιατί η ένταση του ερυθρού τόνου (τιμή a*) παρέμεινε σχεδόν αμετάβλητη καθ' όλη τη διάρκεια της συντήρησης. Η τιμή L* αντίθετα μειώθηκε μέχρι την 75η ημέρα και στη συνέχεια παρέμεινε σταθερή. Μεταξύ των φιλέτων με δέρμα και χωρίς δέρμα σημαντικές διαφορές παρατηρήθηκαν στο χρώμα της εξωτερικής τους επιφάνειας. Τόσο η τιμή L*, όσο και η τιμή a*, ήταν μικρότερες στα φιλέτα χωρίς δέρμα και αυτό πιθανόν οφείλεται στην εντονότερη αφυδάτωση και απορρόφηση των συστατικών του καπνού. Η φιλετοποίηση της πρώτης ΰλης πριν από την επεξεργασία της είχε επίσης ως αποτέλεσμα την παντελή αποφυγή του φαινομένου της ρηγμάτωσης της σάρκας του ετοίμου προϊόντος και την ανάπτυξη μιας ικανοποιητικής σύστασης, η οποία παρέμεινε σταθερή σε όλη τη διάρκεια της συντήρησης., The aim of this research was to investigate some problems related to Rainbow trout's (Oncorhynchus mykiss) hot-smoking process as well as the color texture evaluation of the final product. The skin-on and skin-off fillets were hot-smoked and kept in vacuum-packed storage at 2°C±0.1. Color and texture measurements and biochemical analysis were carried out during 120 days of storage on days 1, 45, 75 and 120. The results have showed no significant differences between skin-on and ski-off fillets in carotenoids and retinol content. This values were reduced from 0,4-0,5 and 0,08-0,10 mg/g (1st day) to 0,2 and 0,04 mg/g by day 45 respectively. Thereafter they remained unchanged until the end of the storage. However, they were proved sufficient for the stability of the red color of the final product, as the a* value remained fairly constant, during the whole storage period. Significant differences between skin-on and skin-off fillets were observed in their external surface color. Both L* and a* values were lower in skin-off fillets and this is probably attributed to the more intense dehydration and absorption of the smoke constituents in this fillets. Moreover, the filleting of raw material before processing, resulted in both complete absence of fish gapping in the end product and satisfactory texture, which remained the same during the whole storage period.
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- 2018
194. Herschel-ATLAS : The spatial clustering of low and high redshift submillimetre galaxies
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J. Greenslade, Elisabetta Valiante, C. Tai-An, Stephen Anthony Eales, Matthew Smith, E. van Kampen, Lingyu Wang, G. de Zotti, Michał J. Michałowski, Loretta Dunne, J. González-Nuevo, Mattia Negrello, P. Andreani, Steve Maddox, Aristeidis Amvrosiadis, and Astronomy
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Terahertz radiation ,media_common.quotation_subject ,DATA RELEASE ,Flux ,FOS: Physical sciences ,Astrophysics ,01 natural sciences ,galaxies: high-redshift ,0103 physical sciences ,EXPLORER ,NUMBER COUNTS ,010303 astronomy & astrophysics ,POPULATION ,media_common ,BRIGHT ,Physics ,010308 nuclear & particles physics ,Astronomy and Astrophysics ,COUNTERPARTS ,Astrophysics - Astrophysics of Galaxies ,Universe ,Galaxy ,Redshift ,MODEL ,Wavelength ,BIAS ,Space and Planetary Science ,Astrophysics of Galaxies (astro-ph.GA) ,Elliptical galaxy ,Halo ,large-scale structure of Universe ,galaxies: evolution ,SKY SURVEY ,submillimetre: galaxies ,COSMOLOGY LEGACY SURVEY - Abstract
We present measurements of the angular correlation function of sub-millimeter (sub-mm) galaxies (SMGs) identified in four out of the five fields of the Herschel Astrophysical Terahertz Large Area Survey (H-ATLAS) - GAMA-9h, GAMA-12h, GAMA-15h and NGP - with flux densities $S_{250��m}$>30 mJy at 250 ��m. We show that galaxies selected at this wavelength trace the underlying matter distribution differently at low and high redshifts. We study the evolution of the clustering finding that at low redshifts sub-mm galaxies exhibit clustering strengths of $r_0$ $\sim$ 2 - 3 $h^{-1}$ Mpc, below z < 0.3. At high redshifts, on the other hand, we find that sub-mm galaxies are more strongly clustered with correlation lengths $r_0$ = 8.1 $\pm$ 0.5, 8.8 $\pm$ 0.8 and 13.9 $\pm$ 3.9 $h^{-1}$Mpc at z = 1 - 2, 2 - 3 and 3 - 5, respectively. We show that sub-mm galaxies across the redshift range 1 < z < 5, typically reside in dark-matter halos of mass of the order of ~ $10^{12.5}$ - $10^{13.0}$ $h^{-1} \, M_{\odot}$ and are consistent with being the progenitors of local massive elliptical galaxies that we see in the local Universe., 17 pages, 11 figures, 3 tables. Accepted for publication in MNRAS
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- 2018
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195. Modelling high resolution ALMA observations of strongly lensed highly star forming galaxies detected by Herschel
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Stephen Anthony Eales, Asantha Cooray, Hooshang Nayyeri, C. Furlanetto, Dominik Riechers, Duncan Farrah, Loretta Dunne, P. van der Werf, Aristeidis Amvrosiadis, Simon Dye, Michał J. Michałowski, Maarten Baes, Lucia Marchetti, Steve Serjeant, and Mattia Negrello
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SAMPLE ,Lentes gravitacionais ,media_common.quotation_subject ,Gravitational lensing ,UNIVERSE ,FOS: Physical sciences ,Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,MASS ,01 natural sciences ,Strong ,0103 physical sciences ,Deslocamento para o vermelho ,COLD DUST ,Galáxias ,DUSTY GALAXIES ,NUMBER COUNTS ,010303 astronomy & astrophysics ,Astrophysics::Galaxy Astrophysics ,QB ,media_common ,Physics ,biology ,SUBMILLIMETER GALAXIES ,010308 nuclear & particles physics ,Star formation ,Astrophysics::Instrumentation and Methods for Astrophysics ,Structure ,Astronomy and Astrophysics ,Image plane ,ATLAS ,Galaxies ,biology.organism_classification ,Astrophysics - Astrophysics of Galaxies ,Galaxy ,Universe ,Redshift ,GRAVITATIONAL LENSES ,Galaxias ,Interferometry ,Gravitational lens ,Physics and Astronomy ,Space and Planetary Science ,GAS ,Astrophysics of Galaxies (astro-ph.GA) ,strong [gravitational lensing] ,structure [galaxies] - Abstract
We have modelled high resolution ALMA imaging of six strong gravitationally lensed galaxies detected by the Herschel Space Observatory. Our modelling recovers mass properties of the lensing galaxies and, by determining magnification factors, intrinsic properties of the lensed sub-millimetre sources. We find that the lensed galaxies all have high ratios of star formation rate to dust mass, consistent with or higher than the mean ratio for high redshift sub-millimetre galaxies and low redshift ultra-luminous infra-red galaxies. Source reconstruction reveals that most galaxies exhibit disturbed morphologies. Both the cleaned image plane data and the directly observed interferometric visibilities have been modelled, enabling comparison of both approaches. In the majority of cases, the recovered lens models are consistent between methods, all six having mass density profiles that are close to isothermal. However, one system with poor signal to noise shows mildly significant differences., 13 pages, 4 figures. v3 includes minor alterations following further refereeing of v2
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- 2017
196. The Herschel-ATLAS: a sample of 500?m-selected lensed galaxies over 600 deg2
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Negrello, M., Amber, S., Amvrosiadis, A., Cai, Z.-Y., Lapi, A., Gonzalez-Nuevo, J., De Zotti, G., Furlanetto, C., Maddox, S. J., Allen, M., Bakx, T., Bussmann, R. S., Cooray, A., Covone, G., Danese, L., Dannerbauer, H., Fu, H., Greenslade, J., Gurwell, M., Hopwood, R., Koopmans, L. V. E., Napolitano, N., Nayyeri, H., Omont, Alain, Petrillo, C. E., Riechers, D. A., Serjeant, S., Tortora, C., Valiante, E., Verdoes Kleijn, G., Vernardos, G., Wardlow, J. L., Baes, M., Baker, A. J., Bourne, N., Clements, D., Crawford, S. M., Dye, S., Dunne, L., Eales, S., Ivison, R. J., Marchetti, L., Micha?owski, M. J., Smith, M. W. L., Vaccari, M., and van der Werf, Paul
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Gravitational lensing, Galaxies high-redshift, Submillimetre ,Astrophysics::Cosmology and Extragalactic Astrophysics ,Astrophysics::Galaxy Astrophysics - Abstract
We present a sample of 80 candidate strongly lensed galaxies with flux density above 100 mJy at 500 μm extracted from the Herschel Astrophysical Terahertz Large Area Survey, over an area of 600 deg2. Available imaging and spectroscopic data allow us to confirm the strong lensing in 20 cases and to reject it in one case. For other eight objects, the lensing scenario is strongly supported by the presence of two sources along the same line of sight with distinct photometric redshifts. The remaining objects await more follow-up observations to confirm their nature. The lenses and the background sources have median redshifts zL = 0.6 and zS = 2.5, respectively, and are observed out to zL = 1.2 and zS = 4.2. We measure the number counts of candidate lensed galaxies at 500 μm and compare them with theoretical predictions, finding a good agreement for a maximum magnification of the background sources in the range 10–20. These values are consistent with the magnification factors derived from the lens modelling of individual systems. The catalogue presented here provides sub-mm bright targets for follow-up observations aimed at exploiting gravitational lensing, to study with unprecedented details the morphological and dynamical properties of dusty star-forming regions in z ≳ 1.5 galaxies.
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- 2017
197. INFLAMMATION IN IRRITABLE BOWEL SYNDROME: MYTH OR NEW TREATMENT TARGET?
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Giovanni Tomasello, Francesco Cappello, Georgios Amvrosiadis, Francesca Rossi, Dario Raimondo, Gaetano Cristian Morreale, Aroldo Rizzo, Emanuele Sinagra, Attilio Ignazio Lo Monte, Giancarlo Pompei, Sinagra,E, Pompei,G, Tomasello,G, Cappello,F, Morreale,GC, Amvrosiadis,G, Rossi,F, Lo Monte,AI, Rizzo,G, and Raimondo,D
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Pathology ,medicine.medical_specialty ,MEDLINE ,Anti-Inflammatory Agents ,Inflammation ,Cochrane Library ,Bioinformatics ,Mast cell ,03 medical and health sciences ,0302 clinical medicine ,Treatment targets ,Gastrointestinal Agents ,Intestinal inflammation ,medicine ,Animals ,Humans ,Molecular Targeted Therapy ,Topic Highlight ,Intestinal Mucosa ,Irritable bowel syndrome ,Settore MED/12 - Gastroenterologia ,Mechanism (biology) ,business.industry ,Settore BIO/16 - Anatomia Umana ,Gastroenterology ,General Medicine ,Mast cells ,Neuroendocrine cells ,medicine.disease ,Enteritis ,Clinical trial ,Settore MED/18 - Chirurgia Generale ,030220 oncology & carcinogenesis ,Neuroendocrine cell ,030211 gastroenterology & hepatology ,medicine.symptom ,Inflammation Mediators ,business - Abstract
Low-grade intestinal inflammation plays a key role in the pathophysiology of irritable bowel syndrome (IBS), and this role is likely to be multifactorial. The aim of this review was to summarize the evidence on the spectrum of mucosal inflammation in IBS, highlighting the relationship of this inflammation to the pathophysiology of IBS and its connection to clinical practice. We carried out a bibliographic search in Medline and the Cochrane Library for the period of January 1966 to December 2014, focusing on publications describing an interaction between inflammation and IBS. Several evidences demonstrate microscopic and molecular abnormalities in IBS patients. Understanding the mechanisms underlying low-grade inflammation in IBS may help to design clinical trials to test the efficacy and safety of drugs that target this pathophysiologic mechanism.
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- 2016
198. COULD THE ENDOSCOPIC RESECTION OF A LARGE RECTAL LEIOMYOMA BE AN EFFETCIVE AND SAFE TECHNIQUE?
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Sinagra,E, Pompei,G, Menozzi,M, Mandalà,S, Rossi,F, Martorana,G, Messina,M, Rizzo,AG, Calvaruso,M, Morreale,GC, Amvrosiadis,G, Raimondo D., TOMASELLO, Giovanni, CAPPELLO, Francesco, CARINI, Francesco, Sinagra,E, Tomasello,G, Pompei,G, Menozzi,M, Mandalà,S, Rossi,F, Martorana,G, Messina,M, Rizzo,AG, Calvaruso,M, Morreale,GC, Amvrosiadis,G, Cappello,F, Carini,F, and Raimondo D
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Settore MED/18 - Chirurgia Generale ,Settore MED/12 - Gastroenterologia ,rectal leiomyoma, endoscopic resection, gastrointestinal stromal tumor - Abstract
Summary. Rectal leiomyomas are a rare conditions, with low reported incidence in literature and constitute about 0.1% of rectal tumours; in fact rectal leiomyomas occur in approximately 1 out of 2000-3000 rectal tumors. We report on a patient with a 3 cm semi-pedunculated colonic leiomyoma, which was successfully removed by endoscopic polypectomy after normal saline-epinephrine submucosal injection. When we encounter a tumor during a colonoscopic examination, we usually evaluate the tumor carefully and perform an endoscopic resection when we judge it is appropriate. When a symptomatic smooth muscle tumors smaller than 2 cm are incidentally found on colonoscopy, surgical resection is unnecessary. Furthermore, if a tumor can be lifted with a snare and it is either pedunculated or semi-pedunculated, endoscopic resection might be a safe option. For those tumors with wide-based or exoluminal growth, endoscopic removal should be avoided due to the higher risks of bleeding and perforation. The histological findings of the resected tumor are important. If there is any malignant element that can not be completely eradicated, we would suggest surgical treatment. We believe our process allows to avoid unnecessary surgery and reduces medical costs.
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- 2016
199. P.05.24 WHAT DOES A ILEOCOLONIC WALL THICKENING MEAN? RESULTS FROM A RETROSPECTIVE STUDY
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S. Pellegrino, Massimo Galia, P. Purpura, Domenico Albano, G. Amvrosiadis, S. Testai, C. Linea, Federico Midiri, G. Albano, Emanuele Sinagra, Marcello Maida, R. Lagalla, V. Bova, M Marasà, Massimo Midiri, Dario Raimondo, Emanuele Grassedonio, and Francesca Rossi
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medicine.medical_specialty ,Hepatology ,business.industry ,Gastroenterology ,medicine ,Retrospective cohort study ,Radiology ,Thickening ,business - Published
- 2019
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200. Efficacy of pneumatic dilatation for the treatment of idiopatic achalasia: a single-center experience
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Dario Raimondo, Georgios Amvrosiadis, Attilio Ignazio Lo Monte, Gaetano Cristian Morreale, Giovanni Tomasello, Marco Ciofalo, L. Montalbano, C. Linea, Gennaro D'Amico, Marco Giunta, Emanuele Sinagra, Aroldo Gabriele Rizzo, Sinagra, E, Raimondo, D, Montalbano, LM, Linea, C, Giunta, M, Amvrosiadis, G, Morreale, GC, Ciofalo, M, Rizzo, AG, Tomasello, G, Lo Monte, AI, and D'Amico, G
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Marketing ,Pharmacology ,Settore MED/12 - Gastroenterologia ,Organizational Behavior and Human Resource Management ,medicine.medical_specialty ,Relative efficacy ,business.industry ,Strategy and Management ,Group ii ,Complete remission ,Pharmaceutical Science ,Achalasia ,medicine.disease ,Single Center ,Dysphagia ,Surgery ,Settore MED/18 - Chirurgia Generale ,achalasia, pneumatic dilatation, esophageal obstruction ,Older patients ,Drug Discovery ,medicine ,In patient ,medicine.symptom ,business - Abstract
Pneumatic dilatation (PD) and Surgical Miotomy (SM) are presently the best treatments for untreated achalasia, with similar efficacy. There is no information on the relative efficacy of PD in younger compared to older patients. Aim of our study was to compare success rate and safety of PD in patients under fifty years old and in those over fifty years old affected by achalasia. Twenty consecutive symptomatic patients were treated in our Unit with graded PD under fluoroscopic view. Five male and 15 female with a median age of 47 years were treated. Twelve patients were less than fifty years old (group I) while 8 were older (group II). Median dysphagia questionnaire score was 14 and13 ingroup I and II respectively. Technical success was achieved in all patients. Seven patients were previously treated through other techniques. In group I all patients achieved a complete remission of symptoms with significant decrease of the dysphagia questionnaire score (3). In group II all patients achieved a complete remission of symptoms with significant decrease of the dysphagia questionnaire score (4.5) but 3 of them repeated the procedure. In boths groups the efficacy of the dilation was radiologically confirmed. Neither early nor late complication were reported in either groups. In our experience PD was an effective and safe procedure both in young and old patients although the older group had more recurrences, all successfully re-dilated.
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- 2015
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