68 results on '"Suk-Yoon, Kwon"'
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2. Comparative analysis of AGPase proteins and conserved domains in sweetpotato (Ipomoea batatas (L.) Lam.) and its two wild relatives
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Hualin Nie, Sujung Kim, Jongbo Kim, Suk-Yoon Kwon, and Sun-Hyung Kim
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Plant Science ,Agronomy and Crop Science ,Biotechnology - Published
- 2022
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3. The Arabidopsis cyclophilin CYP18-1 facilitates PRP18 dephosphorylation and the splicing of introns retained under heat stress
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Seung Hee Jo, Hyun Ji Park, Areum Lee, Haemyeong Jung, Jeong Mee Park, Suk-Yoon Kwon, Hyun-Soon Kim, Hyo-Jun Lee, Youn-Sung Kim, Choonkyun Jung, and Hye Sun Cho
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Alternative Splicing ,Cyclophilins ,Regular Content ,Arabidopsis Proteins ,RNA Splicing ,Arabidopsis ,RNA, Messenger ,Cell Biology ,Plant Science ,Heat-Shock Response ,Introns ,Research Articles - Abstract
In plants, heat stress induces changes in alternative splicing, including intron retention; these events can rapidly alter proteins or downregulate protein activity, producing nonfunctional isoforms or inducing nonsense-mediated decay of messenger RNA (mRNA). Nuclear cyclophilins (CYPs) are accessory proteins in the spliceosome complexes of multicellular eukaryotes. However, whether plant CYPs are involved in pre-mRNA splicing remain unknown. Here, we found that Arabidopsis thaliana CYP18-1 is necessary for the efficient removal of introns that are retained in response to heat stress during germination. CYP18-1 interacts with Step II splicing factors (PRP18a, PRP22, and SWELLMAP1) and associates with the U2 and U5 small nuclear RNAs in response to heat stress. CYP18-1 binds to phospho-PRP18a, and increasing concentrations of CYP18-1 are associated with increasing dephosphorylation of PRP18a. Furthermore, interaction and protoplast transfection assays revealed that CYP18-1 and the PP2A-type phosphatase PP2A B′η co-regulate PRP18a dephosphorylation. RNA-seq and RT-qPCR analysis confirmed that CYP18-1 is essential for splicing introns that are retained under heat stress. Overall, we reveal the mechanism of action by which CYP18-1 activates the dephosphorylation of PRP18 and show that CYP18-1 is crucial for the efficient splicing of retained introns and rapid responses to heat stress in plants.
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- 2022
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4. Comparative proteomic analysis of host responses to Plasmodiophora brassicae infection in susceptible and resistant Brassica oleracea
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Jae Sun Moon, Jeong Mee Park, Sun Tae Kim, Suk-Yoon Kwon, Hyun-Soon Kim, Gyung Ja Choi, Ju Yeon Moon, and Hye Sun Cho
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0106 biological sciences ,0301 basic medicine ,Gel electrophoresis ,biology ,Inoculation ,Host (biology) ,fungi ,food and beverages ,Brassicaceae ,Plant Science ,Plant disease resistance ,biology.organism_classification ,medicine.disease ,01 natural sciences ,Microbiology ,Clubroot ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,chemistry ,medicine ,Brassica oleracea ,Abscisic acid ,010606 plant biology & botany ,Biotechnology - Abstract
Clubroot disease, caused by Plasmodiophora brassicae, is one of the most devastating diseases affecting members of the Brassicaceae family. It is difficult to control by chemical or cultural means, and the molecular mechanisms underlying interactions with Brassica oleracea (cabbage) remain poorly understood. Herein, we used a proteomic approach to investigate B. oleracea–P. brassicae interactions during the early phases of infection in above-ground tissues. Proteins were isolated from the aerial parts of clubroot-susceptible (CT-18) and -resistant (YCR) cabbage cultivars at 5 days after inoculation with P. brassicae or buffer (mock) and resolved by sodium dodecyl sulphate–polyacrylamide gel electrophoresis and two-dimensional gel electrophoresis. A total of 24 differentially modulated proteins were identified in at least two biological replicates, and exhibited altered expression between mock and P. brassicae treatments and/or in the different cabbage cultivars. Most of the identified proteins are involved in oxidative stress, abscisic acid (ABA) metabolism, glucose-mediated signalling and responses to stimuli. Resistant YCR plants harboured an increased abundance of ABA-responsive protein, fructose-bisphosphate aldolase and glucose sensor interaction protein compared with CT-18 plants in both mock and P. brassicae-treated samples, suggesting that they may mediate basal defences against P. brassicae infection in YCR. Specifically, we observed that susceptible (CT-18) plants expressed higher levels of cobalamin-independent methionine synthase than YCR, which may enhance susceptibility of the host. Further investigation of the identified proteins will likely facilitate the identification of key molecular determinants, potentially improving clubroot disease resistance in future cabbage crop species.
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- 2020
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5. First Report of Cotton Leafroll Dwarf Virus Infecting Hibiscus syriacus in South Korea
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Davaajargal Igori, Ah Young Shin, Se Eun Kim, Suk Yoon Kwon, and Jae Sun Moon
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Plant Science ,Agronomy and Crop Science - Abstract
Three cotton leafroll dwarf virus (CLRDV; genus Polerovirus, family Solemoviridae) genotypes have recently been identified (Tabassum et al., 2021; Ramos-Sobrinho et al., 2021). This virus is widespread in the United States (Thiessen et al., 2020; Aboughanem-Sabanadzovic et al., 2019; Tabassum et al., 2020) and has also been reported to infect chickpea (Cicer arietinum) in Uzbekistan (Kumari et al., 2020). As well, CLRDV was detected from 23 weed species (16 families), including Hibiscus sabdariffa (Sedhain et al., 2021, Hagan et al., 2019). From June to September 2019, virus-like symptoms, including mild leaf stunting, crinkling, and deformation, were observed in multiple plants (n=14) in several provinces of South Korea (e-Xtra Table. 1). To characterize the associated viruses, pooled leaf tissues from all 14 samples were used for total RNA isolation, followed by paired-end high-throughput sequencing (HTS) on the Illumina NovaSeq 6000 platform (Macrogen, South Korea). A total of 614,424,952 trimmed and high-quality reads were assembled into 506,024 contigs using Trinity de novo transcriptome assembly. The resulting contigs were compared with viral sequences in the GenBank database using BLASTx analysis. Several viral contigs were identified, including cucumber mosaic virus, apple stem pitting virus, apple stem grooving virus, cherry virus A, and CLRDV. The CLRDV contig of 5,800 nucleotides (nt) with an average coverage of 307x shared 92.1% identity (query coverage: 99%) with the CLRDV isolate CN-S5 (KX588248). To confirm CLRDV infection and to obtain its complete genome sequence, total RNA was extracted from each of the 14 samples and used for reverse transcription (RT)-PCR with six overlapping sets of primers designed from the HTS contig (e-Xtra Table. 2). The expected product sizes were obtained only for the Hibiscus syriacus L. (family: Malvaceae) sample showing foliar mild vein clearing symptoms on the leaves (e-Xtra Fig.1). All RT-PCR products were cloned using the RBC TA Cloning vector (Taipei, Taiwan) and at least five positive clones per cloned DNA fragment were sequenced. The 5 and 3 termini sequences were determined as described previously (Zhao et al. 2016). The complete genome of CLRDV isolate SK (OK073299) was determined to be 5,862 nt and it shared 89-91% complete genome identity with 12 other CLRDV isolates based on pairwise comparisons (e-Xtra Table. 3). Maximum likelihood phylogenetic analysis based on the complete genome and P3-CP aa sequences showed that CLRDV-SK is more closely related CN-S5 (e-Xtra Fig. 2). In the fall of 2021, additional H. syriacus samples (n=18) with mild chlorosis, blistering and crinkling symptoms were collected from 2 provinces of South Korea and tested by RT-PCR using the primers: CLRDV-SK-101-120 ForCLRDV-SK-1021-1040 Rev targeting a region of the ORF0. Two of 18 samples (11.1%) tested positive for CLRDV. The 16 negative samples only showed symptoms of mild yellowing. The RT-PCR products were cloned and sequenced. In pairwise comparisons, the obtained sequences (OM339522-23) were 95.85% and 96.06% identical to the corresponding sequences of CLRDV isolate SK. This is the first report of CLRDV occurrence in H. syriacus in South Korea to the best of our knowledge. Our findings will assist further studies on the epidemiology and sustainable management of diseases caused by CLRDV. Acknowledgments This work was supported by IPET (Korea Institute of Planning and Evaluation for Technology in Food, Agriculture, Forestry and Fisheries; Project No. AGC1762111), Ministry of Agriculture, Food and Rural Affairs, Republic of Korea. References Tabassum, A., et al., 2021. PloS One. 16: e0252523 Ramos-Sobrinho, R., et al., 2021. Viruses. 13:2230 Thiessen, L.D., et al. 2020. Plant Dis. 104:3275 Aboughanem-Sabanadzovic, N., et al. 2019. Plant Dis. 103:1798 Tabassum, A., et al. 2020. Microbiol. Res. Announce. 9:e00812-20 Kumari, S.G., et al. 2021. Plant Dis. 104:2532 Sedhain, N.P., et al. 2021. Crop protection 144:105604 Hagan, A., er al. 2019. Alabama Cooperative Extension System. ANR:2539 Zhao, F., et al. 2016. Arch. Virol. 161:2047 Conflict of interest The authors declare that they have no conflict of interest.
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- 2022
6. Suppression of Phytochrome-Interacting Factors Enhances Photoresponses of Seedlings and Delays Flowering With Increased Plant Height in Brachypodium distachyon
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Quyen T. N. Hoang, Sharanya Tripathi, Jae-Yong Cho, Da-Min Choi, Ah-Young Shin, Suk-Yoon Kwon, Yun-Jeong Han, and Jeong-Il Kim
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Brachypodium distachyon ,flowering ,chlorophyll biosynthesis ,Phytochrome ,fungi ,food and beverages ,Plant culture ,sequestration ,Genetically modified crops ,Plant Science ,Biology ,biology.organism_classification ,phytochrome-interacting factors ,Cell biology ,SB1-1110 ,DNA-binding ,Coleoptile ,RNA interference ,Arabidopsis ,Brachypodium ,Photomorphogenesis - Abstract
Phytochromes are red and far-red photoreceptors that regulate plant growth and development under ambient light conditions. During phytochrome-mediated photomorphogenesis, phytochrome-interacting factors (PIFs) are the most important signaling partners that regulate the expression of light-responsive genes. However, the function of PIFs in monocots has not been studied well. In this study, using RNA interference (RNAi), we investigated the functions of BdPIL1 and BdPIL3, two PIF-like genes identified in Brachypodium distachyon, which are closely related to Arabidopsis PIF1 and PIF3. The expression of their genes is light-inducible, and both BdPIL1 and BdPIL3 proteins interact with phytochromes in an active form-specific manner. Transgenic Brachypodium seedlings with the RNAi constructs of BdPIL1 and BdPIL3 showed decreased coleoptile lengths and increased leaf growth when exposed to both red and far-red light. In addition, the transgenic plants were taller with elongated internodes than wild-type Bd21-3 plant, exhibiting late flowering. Moreover, RNA-seq analysis revealed downregulation of many genes in the transgenic plants, especially those related to the regulation of cell number, floral induction, and chlorophyll biosynthesis, which were consistent with the phenotypes of increased plant height, delayed flowering, and pale green leaves. Furthermore, we demonstrated the DNA-binding ability of BdPIL1 and BdPIL3 to the putative target promoters and that the DNA-binding was inhibited in the presence of phytochromes. Therefore, this study determines a molecular mechanism underlying phytochrome-mediated PIF regulation in Brachypodium, i.e., sequestration, and also elucidates the functions of BdPIL1 and BdPIL3 in the growth and development of the monocot plant.
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- 2021
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7. Suppression of Phytochrome-Interacting Factors Enhances Photoresponses of Seedlings and Delays Flowering With Increased Plant Height in
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Quyen T N, Hoang, Sharanya, Tripathi, Jae-Yong, Cho, Da-Min, Choi, Ah-Young, Shin, Suk-Yoon, Kwon, Yun-Jeong, Han, and Jeong-Il, Kim
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Brachypodium distachyon ,DNA-binding ,flowering ,chlorophyll biosynthesis ,fungi ,food and beverages ,sequestration ,Plant Science ,phytochrome-interacting factors ,Original Research - Abstract
Phytochromes are red and far-red photoreceptors that regulate plant growth and development under ambient light conditions. During phytochrome-mediated photomorphogenesis, phytochrome-interacting factors (PIFs) are the most important signaling partners that regulate the expression of light-responsive genes. However, the function of PIFs in monocots has not been studied well. In this study, using RNA interference (RNAi), we investigated the functions of BdPIL1 and BdPIL3, two PIF-like genes identified in Brachypodium distachyon, which are closely related to Arabidopsis PIF1 and PIF3. The expression of their genes is light-inducible, and both BdPIL1 and BdPIL3 proteins interact with phytochromes in an active form-specific manner. Transgenic Brachypodium seedlings with the RNAi constructs of BdPIL1 and BdPIL3 showed decreased coleoptile lengths and increased leaf growth when exposed to both red and far-red light. In addition, the transgenic plants were taller with elongated internodes than wild-type Bd21-3 plant, exhibiting late flowering. Moreover, RNA-seq analysis revealed downregulation of many genes in the transgenic plants, especially those related to the regulation of cell number, floral induction, and chlorophyll biosynthesis, which were consistent with the phenotypes of increased plant height, delayed flowering, and pale green leaves. Furthermore, we demonstrated the DNA-binding ability of BdPIL1 and BdPIL3 to the putative target promoters and that the DNA-binding was inhibited in the presence of phytochromes. Therefore, this study determines a molecular mechanism underlying phytochrome-mediated PIF regulation in Brachypodium, i.e., sequestration, and also elucidates the functions of BdPIL1 and BdPIL3 in the growth and development of the monocot plant.
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- 2021
8. Genome-Wide Comparative Analysis of Flowering-Time Genes; Insights on the Gene Family Expansion and Evolutionary Perspective
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Yong Pyo Lim, Seongmin Hong, Yong-Min Kim, Suk-Yoon Kwon, and Ah-Young Shin
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0106 biological sciences ,Plant Science ,Biology ,01 natural sciences ,Genome ,SB1-1110 ,03 medical and health sciences ,Gene family ,Copy-number variation ,Gene ,Original Research ,030304 developmental biology ,0303 health sciences ,fungi ,copy number variation ,food and beverages ,Plant culture ,Brassicaceae ,functional diversification ,biology.organism_classification ,polyploidization ,flowering-time gene ,Evolutionary biology ,Subfunctionalization ,Neofunctionalization ,Adaptation ,whole genome duplication ,010606 plant biology & botany - Abstract
In polyploids, whole genome duplication (WGD) played a significant role in genome expansion, evolution and diversification. Many gene families are expanded following polyploidization, with the duplicated genes functionally diversified by neofunctionalization or subfunctionalization. These mechanisms may support adaptation and have likely contributed plant survival during evolution. Flowering time is an important trait in plants, which affects critical features, such as crop yields. The flowering-time gene family is one of the largest expanded gene families in plants, with its members playing various roles in plant development. Here, we performed genome-wide identification and comparative analysis of flowering-time genes in three palnt families i.e., Malvaceae, Brassicaceae, and Solanaceae, which indicate these genes were expanded following the event/s of polyploidization. Duplicated genes have been retained during evolution, although genome reorganization occurred in their flanking regions. Further investigation of sequence conservation and similarity network analyses provide evidence for functional diversification of duplicated genes during evolution. These functionally diversified genes play important roles in plant development and provide advantages to plants for adaptation and survival in response to environmental changes encountered during evolution. Collectively, we show that flowering-time genes were expanded following polyploidization and retained as large gene family by providing advantages from functional diversification during evolution.
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- 2021
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9. The expression of cyanobacterial glycolate–decarboxylation pathway genes improves biomass accumulation in Arabidopsis thaliana
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Tatheer Alam Naqvi, Charilaos Yiotis, Bruce Osborne, Misbah Bilal, Raza Ahmad, Youn-Il Park, Suk-Yoon Kwon, Anum Zeb Abbasi, Jamshaid Hussain, Ghazal Khurshid, and Mohammad Maroof Shah
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0106 biological sciences ,0301 basic medicine ,biology ,Transgene ,fungi ,food and beverages ,Dehydrogenase ,Plant Science ,Chimeric gene ,biology.organism_classification ,01 natural sciences ,Glycolate dehydrogenase ,Molecular biology ,Oxalate decarboxylase ,03 medical and health sciences ,Transformation (genetics) ,030104 developmental biology ,Arabidopsis thaliana ,Photorespiration ,010606 plant biology & botany ,Biotechnology - Abstract
Transgenic Arabidopsis thaliana plants expressing cyanobacterial decarboxylation genes GLCD1 (GLYCOLATE DEHYDROGENASE I), HDH (HYDROXYACID DEHYDROGENASE), ODC (OXALATE DECARBOXYLASE) alone, and HDH::ODC simultaneously were successfully developed. Plants independently expressing GLCD1, HDH, ODC, and HDH::ODC were referred to as GD, HD, OX, and HX plants, respectively. The single-copy homozygous GD, HD, OX, and HX plants exhibited appreciable expression of chimeric genes. Phenotypic characterization demonstrated that rosette diameter of GD, HD, OX, and HX was 20, 22, 17, and 16% higher than wild-type (WT) plants. Total numbers of leaves were 32, 35, 37, and 34% more than WT plants after 32 days of sowing. Similarly, all transgenic plants produced more cauline branches than WT plants. All transgenic plants gained more height as compared to WT when recorded after 42 days of growth except HX transgenic plants. Plants vegetative dry biomass was 43% (GD), 35% (HD), 42% (OX), and 36% (HX) higher than WT plants. This is the first report on characterization of cyanobacterial decarboxylation pathway genes, which will pave the way for transformation of complete pathway in plants for better biomass accumulation.
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- 2019
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10. An insight into the tomato spotted wilt virus (TSWV), tomato and thrips interaction
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Sun Tae Kim, Ravi Gupta, and Suk-Yoon Kwon
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0301 basic medicine ,Abiotic component ,medicine.medical_specialty ,biology ,Thrips ,fungi ,food and beverages ,Genomics ,Plant Science ,Lycopersicum esculentum ,biology.organism_classification ,03 medical and health sciences ,Horticulture ,030104 developmental biology ,Molecular genetics ,Plant virus ,medicine ,Tomato spotted wilt virus ,Solanaceae ,Biotechnology - Abstract
Lycopersicum esculentum (tomato), is a member of the Solanaceae family with a global production of approximately 159 million tons per year. However, the productivity of tomato is constrained by many factors including biotic and abiotic stresses. Of these, tomato spotted wilt virus (TSWV) is one of the major threats to tomato productivity. TSWV is a ribovirus and is transmitted by small insects commonly known as thrips. Several approaches have been utilized in the past few decades to understand the plant and thrips responses against TSWV. These include conventional molecular biology to high-throughput genomics, transcriptomics, and proteomics approaches which have led to the identification of several genes/proteins involved in the tomato/thrips-TSWV interaction. Moreover, several genes (such as Sw-1 a and Sw-1 b , sw-2, sw-3, sw-4, Sw-5, Sw-6, and Sw-7) and proteins (like DNA-J) have also been identified from its plant hosts which provide resistance against this deadly virus. In this mini-review, we are summarizing the progress made so far in this area to provide the overview of tomato, thrips and TSWV interaction.
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- 2018
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11. Comparative transcriptome profiling and SSR marker identification in three Jerusalem artichoke (Helianthus tuberosus L.) cultivars exhibiting phenotypic variation
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Won Yong Jung, Hye Sun Cho, Sang Sook Lee, Hyun-Soon Kim, Suk-Yoon Kwon, Chul Wook Kim, Hyun Ji Park, and Jae-Heung Jeon
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0301 basic medicine ,biology ,fungi ,food and beverages ,Plant Science ,Asteraceae ,biology.organism_classification ,Transcriptome ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,chemistry ,Genetic marker ,Anthocyanin ,Botany ,Microsatellite ,Cultivar ,Helianthus ,Biotechnology ,Jerusalem artichoke - Abstract
Jerusalem artichoke (Helianthus tuberosus L.), a plant of the Asteraceae family, is widely cultivated for its multiple pharmacological properties and is being developed as a renewable feedstock, as well as a source of biofuels and biochemicals for industrial applications. Despite its nutritional benefits and economic potential, transcriptomic and genomic information is scarce. In the present study, we performed phenotypic characterization and RNA-Seq analysis of three Jerusalem artichoke cultivars, “Purple Jerusalem artichoke” (PJA), “Hindung Jerusalem artichoke” (HJA) and “Dafeng Jerusalem artichoke” (DJA). The cultivars exhibited obvious differences in their responses to drought, high salinity and oxidative stress, as well as morphological variations. The PJA cultivar had the highest concentration of anthocyanin, and the DJA cultivar had the strongest tolerance to environmental stresses among the three cultivars. Based on the three assembled transcriptomes, we identified 2435, 3283 and 3657 putative cultivar-specific transcripts from leaf and tuber tissues in cultivars PJA, HJA and DJA, respectively, which enlarges the pool of transcriptomes available for Jerusalem artichoke. We also detected 11,319, 13,190 and 12,717 potential cultivar-specific simple sequence repeats (SSRs) from the transcriptomic data for, PJA, HJA and DJA, respectively. In addition, five SSRs were identified as candidate molecular markers for cultivar identification, as determined by genomic PCR analysis. Our comparative RNA-Seq analysis and de novo transcriptome assemblies constitute a comprehensive transcriptome resource and provide essential sequence information for identifying Jerusalem artichoke cultivars. These results should therefore be useful for future gene discovery, molecular studies and agricultural improvement of this important non-model species.
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- 2016
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12. Production of transgenic cucumber expressing phytoene synthase-2A carotene desaturase gene
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Setyo Dwi Utomo, Suk-Yoon Kwon, Pil Son Choi, Hyun A Jang, Ye Xing-guo, and Sun-Hwa Ha
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0106 biological sciences ,0301 basic medicine ,Phytoene synthase ,biology ,Transgene ,medicine.medical_treatment ,Carotene ,Plant Science ,01 natural sciences ,03 medical and health sciences ,030104 developmental biology ,Biochemistry ,Botany ,biology.protein ,medicine ,Agronomy and Crop Science ,Gene ,010606 plant biology & botany ,Biotechnology ,Transformation efficiency - Published
- 2016
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13. Improvement of biomass accumulation of potato plants by transformation of cyanobacterial photorespiratory glycolate catabolism pathway genes
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Youn-Il Park, Jae-Heung Jeon, Misbah Bilal, Mohammad Maroof Shah, Raza Ahmad, Hyun Soon Kim, and Suk-Yoon Kwon
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0106 biological sciences ,0301 basic medicine ,Catabolism ,Transgene ,fungi ,Glyoxylate cycle ,food and beverages ,Plant Science ,Genetically modified crops ,Biology ,01 natural sciences ,Glycolate dehydrogenase ,03 medical and health sciences ,chemistry.chemical_compound ,Transformation (genetics) ,030104 developmental biology ,Biochemistry ,chemistry ,Chlorophyll ,Botany ,Photorespiration ,010606 plant biology & botany ,Biotechnology - Abstract
Transgenic potato (Solanum tuberosum L. cv. Desiree) plants expressing components of a novel cyanobacterial photorespiratory glycolate catabolism pathway were developed. Transgenic plant expressing glcD1 (glycolate dehydrogenase I) gene was referred to as synGDH and transgenic plants expressing gcl (glyoxylate carboligase) and tsr (tartronic semialdehyde reductase) genes simultaneously were designated as synGT. Both synGDH and synGT plants showed stable gene transformation, integration and expression. Enhanced glyoxylate contents in synGDH plants were detected as compared to synGT and non-transgenic (NT) plants. Phenotypic evaluation revealed that synGDH plants accumulated 11 % higher dry weight, while, tuber weight was 38 and 16 % higher than NT and synGT, respectively. Upon challenging the plants in high temperature and high light conditions synGDH plants maintained higher Fv/Fm and showed less bleaching of chlorophyll as compared to synGT and NT plants. These results indicate that genetic transformation of complete pathway in one plant holds promising outcomes in terms of biomass accumulation to meet future needs for food and energy.
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- 2016
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14. Isolation of novel leaf-inhabiting endophytic bacteria in Arabidopsis thaliana and their antagonistic effects on phytophathogens
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Chi Eun Hong, Ju Yeon Moon, Sung Hee Jo, Jeong Mee Park, Suk-Yoon Kwon, and Jung-Sook Lee
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biology ,Host (biology) ,fungi ,Bacillus cereus ,food and beverages ,Plant Science ,Plant disease resistance ,biology.organism_classification ,Microbiology ,Botany ,Fusarium oxysporum ,Pseudomonas syringae ,Arabidopsis thaliana ,Bacteria ,Biotechnology ,Botrytis cinerea - Abstract
Bacterial endophytes benefit the host with protection against abiotic and biotic stresses and through increased plant growth. In this study, we screened novel endophytes for the ability to endophytically inhabit leaf tissues. Four endophytic bacteria were screened from the apoplastic fluids extracted from the uninfected upper leaves of Arabidopsis thaliana 3 days postinoculation (dpi) with Pseudomonas syringae pv. tomato DC3000 (Pst). Under sterile plant growth conditions, we showed that the four isolates proliferated intercellularly in the leaf tissues of A. thaliana. Based on 16S rRNA sequencing analysis, the identities of the inoculated endophytes and the re-isolates from the leaf tissues were confirmed. Among the isolates, the two species of Rhodococcus were the first members of the genus to be identified as leaf-inhabiting endophytes. Additionally, three of the isolates showed antagonistic activities, with different levels of activity, against Fusarium oxysporum pv. conglutinans (F.o.) and/or Pst. Furthermore, the application of one isolate, Bacillus cereus KB1, on tomato plants significantly increased the disease resistance to Botrytis cinerea and Pst. In combination, these results indicate that these endophytic isolates can be used to develop potential biocontrol agents against a variety of pathogenic fungi and bacteria.
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- 2015
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15. Current status of genetic transformation technology developed in cucumber (Cucumis sativus L.)
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Cong-fen He, Shun-li Wang, Suk-Yoon Kwon, Xing-guo Ye, Seong Sub Ku, and Pil Son Choi
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food.ingredient ,Agrobacterium ,Agriculture (General) ,Transgene ,Cucumis sativus L ,Plant Science ,Genetically modified crops ,Biology ,Biochemistry ,S1-972 ,food ,Food Animals ,Botany ,plant regeneration ,Cultivar ,Ecology ,business.industry ,food and beverages ,biology.organism_classification ,Biotechnology ,Transformation (genetics) ,positive selection system ,genetic transformation ,Animal Science and Zoology ,business ,Agronomy and Crop Science ,Cucumis ,Cotyledon ,Food Science ,Transformation efficiency - Abstract
Genetic transformation is an important technique for functional genomics study and genetic improvement of plants. Until now, Agrobacterium-mediated transformation methods using cotyledon as explants has been the major approach for cucumber, and its frequency has been up to 23%. For example, significantly enhancement of the transformation efficiency of this plant species was achieved from the cotyledon explants of the cultivar Poinsett 76 infected by Agrobacterium strains EHA105 with efficient positive selection system in lots of experiments. This review is to summarize some key factors influencing cucumber regeneration and genetic transformation, including target genes, selection systems and the ways of transgene introduction, and then to put forward some strategies for the increasing of cucumber transformation efficiency. In the future, it is high possible for cucumber to be potential bioreactor to produce vaccine and biomaterials for human beings.
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- 2015
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16. Rice Transcription Factor OsDOF11 Modulates Sugar Transport by Promoting Expression of Sucrose Transporter and SWEET Genes
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Jinhuan Wei, Youngchul Yoo, Yunfei Wu, Suk-Yoon Kwon, Gynheung An, Sang-Kyu Lee, Sang-Won Lee, and Jong-Seong Jeon
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0106 biological sciences ,0301 basic medicine ,Sucrose ,Mutant ,Plant Science ,01 natural sciences ,Plant Roots ,03 medical and health sciences ,chemistry.chemical_compound ,Xanthomonas oryzae ,Gene Expression Regulation, Plant ,Sugar ,Molecular Biology ,Plant Proteins ,Oryza sativa ,biology ,Membrane transport protein ,food and beverages ,Membrane Transport Proteins ,Biological Transport ,Oryza ,Sucrose transport ,biology.organism_classification ,Cell biology ,Plant Leaves ,030104 developmental biology ,Phenotype ,chemistry ,biology.protein ,Phloem ,Sugars ,010606 plant biology & botany ,Transcription Factors - Abstract
Sucrose is produced in mesophyll cells and transferred into phloem cells before it is delivered long-distance to sink tissues. However, little is known about how sucrose transport is regulated in plants. Here, we identified a T-DNA insertional mutant of Oryza sativa DNA BINDING WITH ONE FINGER 11 (OsDOF11), which is expressed in the vascular cells of photosynthetic organs and in various sink tissues. The osdof11 mutant plants are semi-dwarf and have fewer tillers and smaller panicles as compared with wild-type (WT) plants. Although sucrose enhanced root elongation in young WT seedlings, this enhancement did not occur in osdof11 seedlings due to reduced sucrose uptake. Sugar transport rate analyses revealed that less sugar was transported in osdof11 plants than in the WT. Expression of four Sucrose Transporter (SUT) genes-OsSUT1, OsSUT3, OsSUT4, and OsSUT5-as well as two Sugars Will Eventually be Exported Transporters (SWEET) genes, OsSWEET11 and OsSWEET14, was altered in various organs of the mutant, including the leaves. Chromatin immunoprecipitation assays showed that OsDOF11 directly binds the promoter regions of SUT1, OsSWEET11, and OsSWEET14, indicating that the expression of these transporters responsible for sucrose transport via apoplastic loading is coordinately controlled by OsDOF11. We also observed that osdof11 mutant plants were less susceptible to infection by Xanthomonas oryzae pathovar oryzae, suggesting that OsDOF11 participates in sugar distribution during pathogenic invasion. Collectively, these results suggest that OsDOF11 modulates sugar transport by regulating the expression of both SUT and SWEET genes in rice.
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- 2017
17. Expression of cucumber LOX genes in response to powdery mildew and defense-related signal molecules
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Jungeun Kim, Park Youn-Ii, Hyun A Jang, Doil Choi, Suk-Yoon Kwon, and Sang-Keun Oh
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Methyl jasmonate ,biology ,food and beverages ,Plant Science ,Horticulture ,biology.organism_classification ,Genome ,chemistry.chemical_compound ,Lipoxygenase ,chemistry ,Biochemistry ,Botany ,biology.protein ,Agronomy and Crop Science ,Sphaerotheca ,Abscisic acid ,Gene ,Salicylic acid ,Powdery mildew - Abstract
Oh, S.-K., Jang, H. A., Kim, J., Choi, D., Park, Y.-I. and Kwon, S.-Y. 2014. Expression of cucumber LOX genes in response to powdery mildew and defense-related signal molecules. Can. J. Plant Sci. 94: 845–850. The cucumber genome contains 23 lipoxygenase (LOX) genes. The expression of seven type-I and six type-II LOX genes was induced when cucumber leaves were challenged with Sphaerotheca fuliginea and treated with salicylic acid, methyl jasmonate, and abscisic acid. These 13 CsLOX genes were differentially regulated during biotic and abiotic stresses.
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- 2014
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18. Cucumber Pti1-L is a cytoplasmic protein kinase involved in defense responses and salt tolerance
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Sang-Keun Oh, Hye Sun Cho, Sang Sook Lee, Doil Choi, Hyun A Jang, Dong-Hee Lee, and Suk-Yoon Kwon
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Chlorophyll ,Cytoplasm ,Physiology ,Molecular Sequence Data ,Pseudomonas syringae ,Nicotiana benthamiana ,Plant Science ,Biology ,Microbiology ,chemistry.chemical_compound ,Ascomycota ,Gene Expression Regulation, Plant ,Tobacco ,Plant defense against herbivory ,Amino Acid Sequence ,Abscisic acid ,Plant Diseases ,Plant Proteins ,Botrytis cinerea ,Methyl jasmonate ,Cell Death ,fungi ,Autophosphorylation ,food and beverages ,Salt Tolerance ,Plants, Genetically Modified ,biology.organism_classification ,Plant Leaves ,chemistry ,Biochemistry ,Seedlings ,Botrytis ,Cucumis sativus ,Protein Kinases ,Sequence Alignment ,Agronomy and Crop Science ,Salicylic acid - Abstract
Summary Homologs of the cytoplasmic protein kinase Pti1 are found in diverse plant species. A clear role of Pti1 in plant defense response has not been established. We identified a Pti1 homolog in cucumber (CsPti1-L). CsPti1-L expression was induced when cucumber plants were challenged with the fungal pathogen Sphaerotheca fuliginea or with salt treatment. CsPti1-L expression in cucumber leaves also was induced by methyl jasmonate, salicylic acid, and abscisic acid. CsPti1-L exhibited autophosphorylation activity and was targeted to the cytoplasm. Transgenic Nicotiana benthamiana expressing CsPti1-L exhibited greater cell death and increased ion leakage in response to the bacterial pathogen Pseudomonas syringae pv. tomato DC3000, resistance to Botrytis cinerea infection, and higher tolerance to salt stress. RT-PCR analysis of transgenic N. benthamiana overexpressing CsPti1-L revealed constitutive upregulation of multiple genes involved in plant-defense and osmotic-stress responses. Our results suggest a functional role for CsPti1-L as a positive regulator of pathogen-defense and salt-stress responses.
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- 2014
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19. Expression of Dengue virus EIII domain-coding gene in maize as an edible vaccine candidate
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Hyun A Kim, Moon Sik Yang, Pil Son Choi, and Suk-Yoon Kwon
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Genetically modified maize ,Strain (biology) ,food and beverages ,Plant Science ,Genetically modified crops ,Dengue virus ,Biology ,medicine.disease_cause ,Virology ,Genotype ,medicine ,Northern blot ,Agronomy and Crop Science ,Gene ,Biotechnology ,Southern blot - Abstract
Plant-based vaccines possess some advantages over other types of vaccine biotechnology such as safety, low cost of mass vaccination programs, and wider use of vaccines for medicine. This study was undertaken to develop the transgenic maize as edible vaccine candidates for humans. The immature embryos of HiII genotype were inoculated with A. tumefaciens strain C58C1 containing the binary vectors (V662 or V663). The vectors carrying nptII gene as selection marker and scEDIII (V662) or wCTB-scEDIII (V663) target gene, which code EIII proteins inhibite viral adsorption by cells. In total, 721 maize immature embryos were transformed and twenty-two putative transgenic plants were regenerated after 12 weeks selection regime. Of them, two- and six-plants were proved to be integrated with scEDIII and wCTB-scEDIII genes, respectively, by Southern blot analysis. However, only one plant (V662-29-3864) can express the gene of interest confirmed by Northern blot analysis. These results demonstrated that this plant could be used as a candidated source of the vaccine production.
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- 2014
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20. SlPMEI, a pollen-specific gene in tomato
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Suk-Yoon Kwon, Hyun A Kim, Chan Ju Lim, Youn-Il Park, Sang-Keun Oh, Hyun A Jang, Woong Bom Kim, Ha Yeon Lee, and So Young Yi
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food.ingredient ,biology ,Pectin ,Abiotic stress ,fungi ,Stamen ,food and beverages ,Plant Science ,Horticulture ,biology.organism_classification ,medicine.disease_cause ,Cell wall ,food ,Arabidopsis ,Pollen ,Botany ,medicine ,Solanum ,Agronomy and Crop Science ,Gene - Abstract
Kim, W. B., Lim, C. J., Jang, H. A., Yi, S. Y., Oh, S.-K., Lee, H. Y., Kim, H. A., Park, Y.-I. and Kwon, S.-Y. 2014. SlPMEI, a pollen-specific gene in tomato. Can. J. Plant Sci. 94: 73–83. Pectin is one of the main components of plant cell walls, and its biosynthesis is controlled by pectin methylesterase (PME). Pectin methylesterase inhibitors (PMEIs) are key regulators of PME. We report here the cloning and characterization of a novel Solanum lycopersicum L. PMEI gene, SlPMEI. RT-PCR studies of leaf, seed, fruit, flower, and flower organs confirmed that SlPMEI is expressed specifically in pollen. Promoter analysis of SlPMEI revealed pollen-specific cis-acting elements (pollen lat52 and g10). In addition, SlPMEI is expressed independently of abiotic stress, pathogen exposure, and growth stage in tomato, and a histochemical analysis of promoter activity revealed pollen-specific expression in both Arabidopsis and tomato. Under the microscope, we observed pollen-specific GUS expression in the stamen of transgenic tomato plant. These results indicate that the promoter of SlPMEI has strong pollen-specific activity, and could therefore be useful for development of industrially and agronomically important transgenic plants.
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- 2014
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21. Microarray Analysis of bacterial blight resistance 1 mutant rice infected with Xanthomonas oryzae pv. oryzae
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Chan Ju Lim, Jong-Seong Jeon, Suk-Yoon Kwon, So Young Yi, Ha Yeon Lee, Woong Kim, Hyun A Kim, and Hyun A Jang
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Genetics ,biology ,Microarray analysis techniques ,Mutant ,food and beverages ,Plant Science ,biology.organism_classification ,Transcription (biology) ,Gene expression ,Xanthomonas oryzae pv. oryzae ,DNA microarray ,Gene ,Transcription factor ,Biotechnology - Abstract
We analyzed the transcriptional profile of the Xoo infected bbr1 mutant using a commercial rice gene chip containing 51,279 transcripts. Microarray revealed 92 genes with increased levels of expression and 22 genes with decreased levels of expression in bbr1. Some of the differentially expressed genes were validated by qRT-PCR. Higher expression of defense-related genes and AP2 domain containing transcription factors along with lower expression of reactive oxygen scavenging enzymes may be responsible for defense signaling in the bbr1 upon Xoo infection. The putative target genes of AP2 domain containing transcription factors also showed differential gene expression during Xoo infection, some of which encoded bacterial pathogen resistance-related protein. Induction of AP2 domain containing transcription factors along with up-regulation of their putative target genes during Xoo infection may inhibit pathogen spread in the bbr1. This observation supports the hypothesis that AP2 domain containing transcription factors is involved in the regulation of differentially expressed genes in bbr1.
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- 2013
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22. Procambium differentiation and shoot apical meristem development in somatic embryos of soybean (Glycine max L.)
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Pil Son Choi and Suk-Yoon Kwon
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Somatic embryogenesis ,Botany ,Glycine ,Plant Science ,Meristem ,Biology ,Agronomy and Crop Science ,Biotechnology ,Cell biology - Abstract
대두 미숙배 배양으로부터 체세포배를 얻기 위해 1 mg/L 2,4-D를 첨가한 MS배지에서 6 - 8주 동안 배양한 결과 2개의 자엽을 갖는 정상체세포배가 14%, 1개의 자엽을 갖는 비정상 체세포배가 37%, 합생자엽을 갖는 비정상 체세포배가 43% 그리고 생장이 멈춘 구형기 체세포배가 6%로 얻어졌다. 체세포배의 전형층은 하배축에서 원형모양으로 분화되어 자엽 절로 이어진 후 1개의 자엽은 1개 전형성층이, 2개의 자엽은 2개의 전형성층이 각 자엽으로 발달하였고, 합생 자엽의 경우 하배축에서 형성된 원형의 전형성층이 자엽까지 연결되어 있었다. 한편 2개의 자엽을 갖는 체세포배의 경우는 tunica-corpus층을 이룬 전형적인 유경조직을 이루고 있었으나 1개 또는 합생 자엽을 갖는 체세포배는 tunica-corpus층이 없고, dome모양이 없는 흔적만 남은 유경조직을 이루고 있었다. 이러한 결과는 체세포배에서 전형성층의 분화는 자엽의 형성과 유경조직의 발달에 밀접한 관계가 있음을 시사한다. 【Immature embryos of Glycine max L. was cultured on Murashige and Skoog's (MS) medium supplemented with 1 mg/L 2,4-dichlorophenoxy acetic acid (2,4-D). After 6 to 8 weeks of culture, immature embryos produced somatic embryos. Of somatic embryos, two cotyledonary embryo (14%), one cotyledonary embryo (37%), fused cotyledonary embryo (43%), and stunted globular embryos (6%) were observed. The procambial strand of cotyledons originated from circular procambial tissues of lower hypocotyl. The circular procambial tissues were independently divided into one or two procambial strand at the edge of cotyledonary-node, and then connected to each cotyledon to form somatic embryos with one or two cotyledons. When cotyledon was a fused type, the circular procambial strand in lower hypocotyl was continuously connected to the cotyledon. Also, somatic embryos with two cotyledons developed a functional shoot apex with the tunica-corpus structure. In contrast, somatic embryos with one or fused cotyledon formed an abnormal shoot apex without the tunica-corpus structure or with non-dome shape in the inter-cotyledonary area. These results indicated that the variation of cotyledon in somatic embryos is closely related to procambial differentiation and shoot apical meristem development.】
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- 2013
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23. Transcriptome analysis of the oriental melon (
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Ah-Young, Shin, Yong-Min, Kim, Namjin, Koo, Su Min, Lee, Seokhyeon, Nahm, and Suk-Yoon, Kwon
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Sucrose ,Pathway analysis ,Bioinformatics ,Korean melon ,Fruit development ,food and beverages ,Genomics ,Plant Science ,Agricultural Science ,Transcriptome ,Molecular Biology ,Carotenoids - Abstract
Background The oriental melon (Cucumis melo L. var. makuwa) is one of the most important cultivated cucurbits grown widely in Korea, Japan, and northern China. It is cultivated because its fruit has a sweet aromatic flavor and is rich in soluble sugars, organic acids, minerals, and vitamins. In order to elucidate the genetic and molecular basis of the developmental changes that determine size, color, and sugar contents of the fruit, we performed de novo transcriptome sequencing to analyze the genes expressed during fruit development. Results We identified a total of 47,666 of representative loci from 100,875 transcripts and functionally annotated 33,963 of the loci based on orthologs in Arabidopsis thaliana. Among those loci, we identified 5,173 differentially expressed genes, which were classified into 14 clusters base on the modulation of their expression patterns. The expression patterns suggested that the differentially expressed genes were related to fruit development and maturation through diverse metabolic pathways. Analyses based on gene set enrichment and the pathways described in the Kyoto Encyclopedia of Genes and Genomes suggested that the expression of genes involved in starch and sucrose metabolism and carotenoid biosynthesis were regulated dynamically during fruit development and subsequent maturation. Conclusion Our results provide the gene expression patterns related to different stages of fruit development and maturation in the oriental melon. The expression patterns give clues about important regulatory mechanisms, especially those involving starch, sugar, and carotenoid biosynthesis, in the development of the oriental melon fruit.
- Published
- 2016
24. Silencing of an α-dioxygenase gene, Ca-DOX, retards growth and suppresses basal disease resistance responses in Capsicum annum
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Hyoju Choi, Chi Eun Hong, Young-Im Ha, Chang Jin Park, Suk-Yoon Kwon, Ah-Young Shin, Jeong Mee Park, Ju Yeon Moon, Jiyoung Lee, Gyeong Mee Yoon, and Ick-Hyun Jo
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0106 biological sciences ,0301 basic medicine ,Hypersensitive response ,Xanthomonas ,Transgene ,Pseudomonas syringae ,Plant Science ,Plant disease resistance ,01 natural sciences ,Dioxygenases ,03 medical and health sciences ,chemistry.chemical_compound ,Microscopy, Electron, Transmission ,Plant Growth Regulators ,Gene Expression Regulation, Plant ,Arabidopsis ,polycyclic compounds ,Genetics ,Gene silencing ,Amino Acid Sequence ,Gene Silencing ,Disease Resistance ,Plant Diseases ,Plant Proteins ,Reporter gene ,Methyl jasmonate ,biology ,Sequence Homology, Amino Acid ,Reverse Transcriptase Polymerase Chain Reaction ,fungi ,food and beverages ,General Medicine ,Oxylipin ,biology.organism_classification ,Plants, Genetically Modified ,Molecular biology ,Plant Leaves ,030104 developmental biology ,chemistry ,Host-Pathogen Interactions ,Capsicum ,Agronomy and Crop Science ,010606 plant biology & botany - Abstract
Alpha-dioxygenases (α-DOX) catalyzing the primary oxygenation of fatty acids to oxylipins were recently found in plants. Here, the biological roles of the pepper α-DOX (Ca-DOX) gene, which is strongly induced during non-host pathogen infection in chili pepper, were examined. Virus-induced gene silencing demonstrated that down-regulation of Ca-DOX enhanced susceptibility to bacterial pathogens and suppressed the hypersensitive response via the suppression of pathogenesis-related genes such as PR4, proteinase inhibitor II and lipid transfer protein (PR14). Ca-DOX-silenced pepper plants also exhibited more retarded growth with lower epidermal cell numbers and reduced cell wall thickness than control plants. To better understand regulation of Ca-DOX, transgenic Arabidopsis plants harboring the β-glucuronidase (GUS) reporter gene driven from a putative Ca-DOX promoter were generated. GUS expression was significantly induced upon avirulent pathogen infection in transgenic Arabidopsis leaves, whereas GUS induction was relatively weak upon virulent pathogen treatment. After treatment with plant hormones, early and strong GUS expression was seen after treatment of salicylic acid, whereas ethylene and methyl jasmonate treatments produced relatively weak and late GUS signals. These results will enable us to further understand the role of α-DOX, which is important in lipid metabolism, defense responses, and growth development in plants.
- Published
- 2016
25. Glycine betaine: a versatile compound with great potential for gene pyramiding to improve crop plant performance against environmental stresses
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Raza Ahmad, Chan Ju Lim, and Suk-Yoon Kwon
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Abiotic component ,Creatures ,business.industry ,fungi ,food and beverages ,Stress protection ,Plant Science ,Biology ,Biotechnology ,chemistry.chemical_compound ,Betaine ,chemistry ,Osmolyte ,Botany ,Inducer ,business ,Plant genes ,Gene - Abstract
Plants are frequently exposed to a plethora of environmental stresses. Being sessile creatures, they have to tolerate any stresses by altering their metabolism. To achieve tolerance, plants synthesize compatible compounds such as glycine betaine (GB). Continuous research over the years has increased our understanding about the mechanisms of stress protection by GB, which range from an osmolyte to a chaperone and from maintenance of reactive oxygen species to gene expression inducer. Various crop plants have also been transformed to synthesize GB along with model plants by introducing bacterial or plant genes. The GB-synthesizing crop plants exhibit enhanced tolerance to various abiotic stresses and out-yield wild-type plants in stressful conditions. GB has also been utilized to improve enhanced stress tolerance by utilizing it in gene stacking experiments due to its synergistic and stabilizing effects. It is reviewed here (along with comparative analysis of GB synthesis pathways and its mechanism to improve tolerance) showing that gene stacking by using GB as one component provides substantial protection. This synergistic role of GB leads us to hypothesize that it can be utilized in virtually any kind of gene stacking experiments to develop crop plants to be grown in arable and marginal lands for better tolerance to ever-changing environmental conditions and to ensure food security in underdeveloped regions of the world.
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- 2012
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26. Anomalous somatic embryos formation and plant regeneration from the cultures of immature embryos of Camellia japonica L
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Pil Son Choi, Suk-Yoon Kwon, and Jong Hye Choi
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Plant growth ,Basal medium ,food.ingredient ,Somatic embryogenesis ,Somatic cell ,food and beverages ,Embryo ,Plant Science ,Biology ,Horticulture ,Murashige and Skoog medium ,food ,Callus ,Botany ,Agronomy and Crop Science ,Cotyledon ,Biotechnology - Abstract
Embryogenic callus was induced from the cultures of immature embryos of Camellia japonica L. on Murashige & Skoog’s (MS) solid medium supplemented with 1 mg/L 2,4-dichlorophenoxy acetic acid (2,4-D), and then the embryogenic callus was proliferated on same medium for 4 weeks over. The embryogenic callus was sub-cultured on MS basal medium without 2,4-D to produce coyledonary stage of somatic embryo. The frequency (%) of somatic embryogenesis was 25.1%, and the majority of somatic embryos formed had a abnormal morphology with cup- shaped cotyledon (48.3%), one cotyledon (12.6%), three cotyledons (9.4%), four cotyledons (1.9%), whereas was only normal morphology with two cotyledon (27.5%). When the somatic embryos with normal or abnormal cotyledons transfer to MS basal medium or ½ MS medium with/or without plant growth regulators (GA 3 , IBA) for regeneration, the frequency (%) of two-cotyledon embryos regenerated into plantlets was higher 11.1% than one cotyledon (0.0~8.3 %), three cotyledons (0.0~5.8%), four cotyledons (0.0%), cup-shaped (0.3~4.2%). These results demonstrated that the anomalous cotyledons of somatic embryos could caused to decrease the rate of plant regeneration.
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- 2011
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27. The use of cotyledonary-node explants in Agrobacterium tumefaciensmediated transformation of cucumber (Cucumis sativus L.)
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Hyun-A Kim, Hyun-A Jang, Dong-Woog Choi, Suk-Yoon Kwon, and Pil-Son Choi
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Agrobacterium ,fungi ,food and beverages ,Plant Science ,Genetically modified crops ,Biology ,biology.organism_classification ,Transformation (genetics) ,Horticulture ,Botany ,Agronomy and Crop Science ,Gene ,Cucumis ,Selectable marker ,Biotechnology ,Explant culture ,Transformation efficiency - Abstract
Agrobacterium tumefaciens-mediated cotyle-donary-node explants transformation was used to produce transgenic cucumber. Cotyledonary-node explants of cucumber (Cucumis sativus L. cv., Eunsung) were co-cultivated with Agrobacterium strains (EHA101) containing the binary vector (pPZP211) carrying with CaMV 35S promoter-nptII gene as selectable marker gene and 35S promoter-DQ gene (unpublished data) as target gene. The average of transformation efficiency (4.01%) was obtained from three times experiments and the maximum efficiency was shown at 5.97%. A total of 9 putative transgenic plants resistant to paromomycin were produced from the cultures of cotyledonary-node explants on selection medium. Among them, 6 transgenic plants showed that the nptII gene integrated into each genome of cucumber by Southern blot analysis.
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- 2011
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28. Overexpression of 2-cysteine peroxiredoxin enhances tolerance to methyl viologen-mediated oxidative stress and high temperature in potato plants
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Dae-Jin Yun, Bo-Young Jang, Sang Yeol Lee, Myoung Duck Kim, Ji-Hong Cho, Yun-Hee Kim, Sang-Soo Kwak, Suk-Yoon Kwon, and Haeng-Soon Lee
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Paraquat ,Hot Temperature ,Physiology ,Transgene ,Agrobacterium ,Plant Science ,Oxidative phosphorylation ,Genetically modified crops ,Biology ,medicine.disease_cause ,Photosynthesis ,Transformation, Genetic ,Gene Expression Regulation, Plant ,Genetics ,medicine ,Promoter Regions, Genetic ,Solanum tuberosum ,Arabidopsis Proteins ,fungi ,food and beverages ,Peroxiredoxins ,Plants, Genetically Modified ,Oxidative Stress ,Transformation (genetics) ,Biochemistry ,Photosynthetic membrane ,Peroxiredoxin ,Oxidative stress - Abstract
Oxidative stress is one of the major causative factors for injury to plants exposed to environmental stresses. Plants have developed diverse defense mechanisms for scavenging oxidative stress-inducing molecules. The antioxidative enzyme 2-cysteine peroxiredoxin (2-Cys Prx) removes peroxides and protects the photosynthetic membrane from oxidative damage. In this study, transgenic potato (Solanum tuberosum L. cv. Atlantic) expressing At2-Cys Prx under control of the oxidative stress-inducible SWPA2 promoter or enhanced CaMV 35S promoter (referred to as SP and EP plants, respectively) was generated using Agrobacterium-mediated transformation. The transgenic plants were tested for tolerance to stress. Following treatment with 3 μM methyl viologen (MV), leaf discs from SP and EP plants showed approximately 33 and 15% less damage than non-transformed (NT) plants. When 300 μM MV was sprayed onto whole plants, the photosynthetic activity of SP plants decreased by 25%, whereas that of NT plants decreased by 60%. In addition, SP plants showed enhanced tolerance to high temperature at 42 °C. After treatment at high temperature, the photosynthetic activity of SP plants decreased by about 7% compared to plants grown at 25 °C, whereas it declined by 31% in NT plants. These results indicate that transgenic potato can efficiently regulate oxidative stress from various environmental stresses via overexpression of At2-Cys Prx under control of the stress-inducible SWPA2 promoter.
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- 2011
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29. Tobacco seeds simultaneously over-expressing Cu/Zn-superoxide dismutase and ascorbate peroxidase display enhanced seed longevity and germination rates under stress conditions
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Sang-Soo Kwak, Jae-Woog Bang, Haeng-Soon Lee, Kwang-Hyun Baek, Suk-Yoon Kwon, and Young Pyo Lee
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Antioxidant ,Physiology ,medicine.medical_treatment ,Gene Expression ,Germination ,Plant Science ,transgenic plants ,seed longevity ,medicine.disease_cause ,Superoxide dismutase ,Ascorbate Peroxidases ,Gene Expression Regulation, Plant ,Stress, Physiological ,Tobacco ,Botany ,medicine ,Plant Proteins ,chemistry.chemical_classification ,Reactive oxygen species ,biology ,Superoxide Dismutase ,Abiotic stress ,food and beverages ,Plants, Genetically Modified ,APX ,Research Papers ,Oxidative Stress ,Horticulture ,Peroxidases ,chemistry ,Seeds ,biology.protein ,Antioxidant enzymes ,Oxidative stress ,Peroxidase - Abstract
Reactive oxygen species (ROS) are produced during seed desiccation, germination, and ageing, leading to cellular damage and seed deterioration and, therefore, decreased seed longevity. The effects of simultaneous over-expression of two antioxidant enzymes on seed longevity and seed germination under stressful conditions were investigated. Transgenic tobacco simultaneously over-expressing the Cu/Zn-superoxide dismutase (CuZnSOD) and ascorbate peroxidase (APX) genes in plastids showed normal growth and seed development. Furthermore, the transgenic seeds displayed increased CuZnSOD and APX enzymatic activities during seed development and maintained antioxidant enzymatic activity after two years of dried storage at room temperature. The two-year stored non-transgenic seeds (aged NT seeds) had higher levels of ion leakage than the two-year stored transgenic seeds (aged CA seeds), indicating membrane damage caused by ROS was more severe in the aged NT seeds than the aged CA seeds. The aged CA seeds decreased germination rates as compared to newly harvested transgenic and non-transgenic seeds. The aged CA seeds, however, significantly increased germination rates under various abiotic stress conditions as compared to aged NT seeds. These data strongly suggest that simultaneous over-expression of the CuZnSOD and APX genes in plastids improves seed longevity and germination under various environmental stress conditions by attenuating the effects of oxidative stress produced by elongated storage conditions and harsh environmental stresses.
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- 2010
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30. A novel WD40 protein, BnSWD1, is involved in salt stress in Brassica napus
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Suk-Yoon Kwon, Hye Sun Cho, S. Kim, Junhee Lee, Jeong Mee Park, Sanghun Lee, and Kyung Hee Paek
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Methyl jasmonate ,cDNA library ,Nucleic acid sequence ,food and beverages ,Plant Science ,Biology ,Molecular biology ,chemistry.chemical_compound ,chemistry ,WD40 repeat ,Complementary DNA ,Gene expression ,Gene ,Abscisic acid ,Biotechnology - Abstract
Genes that are expressed early in specific response to high salinity conditions were isolated from rapeseed plant (Brassica napus L.) using an mRNA differential display method. Five PCR fragments (DD1–5) were isolated that were induced by, but showed different response kinetics to, 200 mM NaCl. Nucleotide sequence analysis and homology search revealed that the deduced amino sequences of three of the five cDNA fragments showed considerable similarity to those of β-mannosidase (DD1), tomato Pti-6 proteins (DD5), and the tobacco harpin-induced protein hin1 (DD4), respectively. In contrast, the remaining clones, DD3 and DD2, did not correspond to any substantial existing annotation. Using the DD3 fragment as a probe, we isolated a full-length cDNA clone from the cDNA library, which we termed BnSWD1 (Brassica napus salt responsive WD40 1). The predicted amino-acid sequence of BnSWD1 contains eight WD40 repeats and is conserved in all eukaryotes. Notably, the BnSWD1 gene is expressed at high levels under salt-stress conditions. Furthermore, we found that BnSWD1 was upregulated after treatment with abscisic acid, salicylic acid, and methyl jasmonate. Our study suggests that BnSWD1, which is a novel WD40 repeat-containing protein, has a function in salt-stress responses in plants, possibly via abscisic acid-dependent and/or -independent signaling pathways.
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- 2010
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31. The development of herbicide-resistant maize: stable Agrobacterium-mediated transformation of maize using explants of type II embryogenic calli
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Jin Seog Kim, Suk-Yoon Kwon, Sung Ran Min, Setyo Dwi Utomo, Hyun A Kim, Han Sang Yoo, and Pil Son Choi
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Pesticide resistance ,biology ,Agrobacterium ,fungi ,Plant Science ,Agrobacterium tumefaciens ,biology.organism_classification ,Transformation (genetics) ,chemistry.chemical_compound ,Glufosinate ,chemistry ,Botany ,Northern blot ,Biotechnology ,Transformation efficiency ,Explant culture - Abstract
One of the limitations to conducting maize Agrobacterium-mediated transformation using explants of immature zygotic embryos routinely is the availability of the explants. To produce immature embryos routinely and continuously requires a well-equipped greenhouse and laborious artificial pollination. To overcome this limitation, an Agrobacterium-mediated transformation system using explants of type II embryogenic calli was developed. Once the type II embryogenic calli are produced, they can be subcultured and/or proliferated conveniently. The objectives of this study were to demonstrate a stable Agrobacterium-mediated transformation of maize using explants of type II embryonic calli and to evaluate the efficiency of the protocol in order to develop herbicide-resistant maize. The type II embryogenic calli were inoculated with Agrobacterium tumefaciens strain C58C1 carrying binary vector pTF102, and then were subsequently cultured on the following media: co-cultivation medium for 1 day, delay medium for 7 days, selection medium for 4 × 14 days, regeneration medium, and finally on germination medium. The T-DNA of the vector carried two cassettes (Ubi promoter-EPSPs ORF-nos and 35S promoter–bar ORF-nos). The EPSPs conferred resistance to glyphosate and bar conferred resistance to phosphinothricin. The confirmation of stable transformation and the efficiency of transformation was based on the resistance to phosphinothricin indicated by the growth of putative transgenic calli on selection medium amended with 4 mg l−1 phosphinothricin, northern blot analysis of bar gene, and leaf painting assay for detection of bar gene-based herbicide resistance. Northern blot analysis and leaf painting assay confirmed the expression of bar transgenes in the R1 generation. The average transformation efficiency was 0.60%. Based on northern blot analysis and leaf painting assay, line 31 was selected as an elite line of maize resistant to herbicide.
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- 2009
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32. Selection of transgenic sweetpotato plants expressing 2-Cys peroxiredoxin with enhanced tolerance to oxidative stress
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Suk-Yoon Kwon, Haeng-Soon Lee, Sang-Soo Kwak, Kyoung-Sil Yang, Sang Yeol Lee, and Myoung-Duck Kim
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Transgene ,medicine ,2 cys peroxiredoxin ,Plant Science ,Biology ,medicine.disease_cause ,Agronomy and Crop Science ,Oxidative stress ,Selection (genetic algorithm) ,Biotechnology ,Cell biology - Published
- 2009
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33. Ectopic Expression of a Cold-Responsive CuZn Superoxide Dismutase Gene, SodCc1, in Transgenic Rice (Oryza sativa L.)
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Sang-Choon Lee, Suk-Yoon Kwon, and Seong-Ryong Kim
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Oryza sativa ,Abiotic stress ,fungi ,food and beverages ,Plant Science ,Biology ,medicine.disease_cause ,Molecular biology ,Genetically modified rice ,Superoxide dismutase ,chemistry.chemical_compound ,chemistry ,Botany ,biology.protein ,medicine ,Ectopic expression ,Abscisic acid ,Chlorophyll fluorescence ,Oxidative stress - Abstract
A cytosolic antioxidant enzyme gene, SodCc1, encoding CuZn superoxide dismutase was characterized from rice. SodCc1 mRNA was up-regulated by cold (4°C and 12°C) and by abscisic acid (ABA) treatment. Transgenic rice plants of Ubi:SodCc1 were generated and overexpression of SodCc1 was confirmed at both transcriptional and translational levels. A stress tolerance test via chlorophyll fluorescence at the seedling stage showed no enhanced tolerance by Ubi:SodCc1 plants to cold or methyl-viologen-induced oxidative stress, but they were slightly resistant to drought. Our wilting assay demonstrated no improvement in tolerance to either cold or drought, indicating that cytosolic SodCc1 might not be significantly involved in conferring such tolerances in rice.
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- 2009
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34. Changes of net photosynthesis, antioxidant enzyme activities, and antioxidant contents of Liriodendron tulipifera under elevated ozone
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Sung Hong Kim, Don Koo Lee, Sang-Hoon Lee, Suk-Yoon Kwon, S Z Ryang, Su Young Woo, and K N Kim
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Antioxidant ,biology ,Physiology ,medicine.medical_treatment ,Glutathione reductase ,Plant Science ,Glutathione ,Ascorbic acid ,Photosynthesis ,Enzyme assay ,chemistry.chemical_compound ,chemistry ,Catalase ,Chlorophyll ,Botany ,medicine ,biology.protein ,Food science - Abstract
Liriodendron tulipifera was exposed to gradually elevated ozone concentrations of 100–300 μg kg−1 in the naturally irradiated environment chamber. During 15 d of exposure to O3, net photosynthetic rate (PN) decreased and there was large difference between the control (C) and treatment with ozone (OT), while there was no significant difference in water use efficiency. Total chlorophyll content as well as the value of fluorescence parameter Fv/Fm decreased, while antioxidant enzyme activities related to ascorbate-glutathione cycle increased after 15 d of OT. Unchanged contents of ascorbate and glutathione indirectly suggest that the species hastened the antioxidant’s oxidization/reduction cycle using enzymes instead of expanding their pool against oxidative stress.
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- 2009
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35. Development of selection marker-free transgenic potato plants with enhanced tolerance to oxidative stress
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Yun-Hee Kim, Haeng Soon Lee, Won Il Chung, Sang Soo Kwak, Myoung Duck Kim, Suk-Yoon Kwon, Raza Ahmad, and Minh Ngoc Phung
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biology ,Transgene ,fungi ,food and beverages ,Plant Science ,Genetically modified crops ,APX ,medicine.disease_cause ,Molecular biology ,Superoxide dismutase ,Transformation (genetics) ,Botany ,biology.protein ,medicine ,Gene ,Oxidative stress ,Transformation efficiency - Abstract
A binary vector devoid of a plant selection-marker gene (designated as pSSA-F) was constructed to overcome bio-safety concerns about genetically modified plants. This vector carried chloroplast-targeted superoxide dismutase (SOD) and ascorbate peroxidase (APX) genes under the control of an oxidative stress-inducible(SWPA2) promoter, and was utilized to transform potato (Solanum tuberosum L.). Integration of these foreign genes into transgenic plants was primarily performed via PCR with genomic DNA. Twelve marker-free transgenic lines were obtained by inoculating stem explants. The maximum transformation efficiency was 6.25% and averaged 2.2%. Successful integration of the SOD and APX genes rendered transgenic plants tolerant to methyl viologen-mediated oxidative stress at the leaf-disc and whole-plant levels. Our findings suggest that this technique for developing selection marker-free transgenic plants is feasible and can be employed with other crop species.
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- 2008
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36. Responses of MxPPO overexpressing transgenic tall fescue plants to two diphenyl-ether herbicides, oxyfluorfen and acifluorfen
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Iftekhar Alam, Jin-Seog Kim, Byung-Hyun Lee, Kyung-Hee Kim, Sang Hoon Lee, Suk-Yoon Kwon, Dong-Gi Lee, Ki-Won Lee, Kyoungwhan Back, Sung Sil Lee, and Nagib Ahsan
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biology ,Physiology ,Transgene ,fungi ,food and beverages ,Plant Science ,Genetically modified crops ,Acifluorfen ,APX ,Superoxide dismutase ,chemistry.chemical_compound ,Biochemistry ,chemistry ,Catalase ,biology.protein ,Protoporphyrinogen oxidase ,Agronomy and Crop Science ,Peroxidase - Abstract
We generated transgenic tall fescue (Festuca arundinacea Schreb. cv. Kentucky-31) plants harboring a synthetic Myxococcus xanthus protoporphyrinogen oxidase (MxPPO) gene through Agrobacterium-mediated gene transfer. Successful integration of the transgene into the genome of transgenic plants confirmed by polymerase chain reaction (PCR) and Southern blot analysis, and the functional expression of the MxPPO gene at the mRNA level in transgenic lines was validated by Northern blot analysis. Responses of transgenic and non-transgenic tall fescue plants to diphenyl-ether herbicides such as oxyfluorfen and acifluorfen have been evaluated in respect of various physiological and biochemical parameters. Differential responses were observed in chlorophyll content, in vivo H2O2 deposition and lipid peroxidation in both transgenic and non-transgenic plants exposed to oxyfluorfen or acifluorfen. Isozyme profiles of four antioxidant-enzymes, including peroxidase (POD), catalase (CAT), superoxide dismutase (SOD) and ascorbate peroxidase (APX), were also investigated in transgenic and non-transgenic plants using native PAGE analysis. Compared to the transgenic lines, higher staining activities of the examined antioxidant-enzymes observed in non-transgenic plants subjected to 100 μM of oxyfluorfen or acifluorfen suggests that non-transgenic plants are unable to prevent the photodynamic induced oxidative stress caused by herbicides. In addition, both transgenic and non-transgenic plants exposed to oxyfluorfen exhibited proportionally increased band-staining patterns in contrast to acifluorfen, which suggests that oxyfluorfen has relatively greater or more rapid effects on leaves than acifluorfen.
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- 2008
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37. Molecular characterization of a cDNA encoding DRE-binding transcription factor from dehydration-treated fibrous roots of sweetpotato
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Sun-Hwa Ryu, Jae-Wook Bang, Sang-Soo Kwak, Wan-Keun Song, Yun-Hee Kim, Haeng-Soon Lee, Suk-Yoon Kwon, Kyoung-Sil Yang, and Kee-Yeun Kim
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DNA, Complementary ,Physiology ,Molecular Sequence Data ,Fibrous root system ,Plant Science ,Biology ,Plant Roots ,chemistry.chemical_compound ,Plant Growth Regulators ,Gene Expression Regulation, Plant ,Complementary DNA ,Genetics ,Amino Acid Sequence ,Ipomoea batatas ,Gene ,Transcription factor ,Abscisic acid ,Phylogeny ,Plant Proteins ,Messenger RNA ,Base Sequence ,Reverse Transcriptase Polymerase Chain Reaction ,cDNA library ,Abiotic stress ,Water ,food and beverages ,Molecular biology ,Plant Leaves ,Biochemistry ,chemistry ,Sequence Alignment ,Abscisic Acid ,Transcription Factors - Abstract
A new dehydration responsive element-binding (DREB) protein gene encoding for an AP2/EREBP-type transcription factor was isolated by screening of the cDNA library for dehydration-treated fibrous roots of sweetpotato (Ipomoea batatas). Its cDNA (referred to as swDREB1) fragment of 1206 bp was sequenced from, which a 257 amino acid residue protein was deduced with a predicted molecular weight of 28.17 kDa. A search of the protein BLAST database revealed that this protein can be classified as a typical member of a DREB subfamily. RT-PCR and northern analyses revealed diverse expression patterns of the swDREB1 gene in various tissues of intact sweetpotato plant, and in leaves and fibrous roots exposed to different stresses. The swDREB1 gene was highly expressed in stems and tuberous roots. In fibrous roots, its mRNA accumulation profiles clearly showed strong expression under various abiotic stress conditions such as dehydration, chilling, salt, methyl viologen (MV), and cadmium (Cd) treatment, whereas it did not respond to abscisic acid (ABA) or copper (Cu) treatment. The above results indicate that swDREB1 may be involved in the process of the plant response to diverse abiotic stresses through an ABA-independent pathway.
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- 2008
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38. Enhanced Tolerance to Oxidative Stress of Transgenic Potato (cv. Superior) Plants Expressing Both SOD and APX in Chloroplasts
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Haeng-Soon Lee, Jin-Seog Kim, Suk-Yoon Kwon, Myoung-Duck Kim, Li Tang, and Sang-Soo Kwak
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Root growth ,Transgene ,fungi ,food and beverages ,Plant Science ,Oxidative phosphorylation ,Biology ,APX ,medicine.disease_cause ,Chloroplast ,Crop ,Botany ,medicine ,Methyl Viologen ,Agronomy and Crop Science ,Oxidative stress ,Biotechnology - Abstract
Oxidative stress is a major damaging factor for plants exposed to environmental stresses. Previously, we have generated transgenic potato (cv. Superior) plants expressing both CuZnSOD and APX genes in chloroplast under the control of an oxidative stress-inducible SWPA2 promoter (referred to as SSA plants) and selected the transgenic potato plant lines with tolerance against methyl viologen (MV)-mediated oxidative stress. When leaf discs of SSA plants were subjected to methyl viologen (MV), they showed approximately 40% less damage than non-transgenic (NT) plants. SSA plantlets were treated with MV stress, SSA plants also exhibited reduced damage in root growth. When 350 MV was sprayed onto the whole plants, SSA plants showed a significant reduction in visible damage, which was approximately 75% less damage than leaves of NT plants. These plants will be used for further analysis of tolerance to environmental stresses, such as high temperature and salt stress. These results suggest that transgenic potato (cv. Superior) plants would be a useful plant crop for commercial cultivation under unfavorable growth conditions.
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- 2007
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39. Expression of CP4 5-Enol-Pyruvylshikimate-3- Phosphate Synthase Transgene in Inbred Line of Korean Domestic Maize (Zea may L.)
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Jin-Seog Kim, Byoung-Kyu Lee, Suk-Yoon Kwon, Pil-Son Choi, Choo-Yeun Moon, and Mi-Ae Cho
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Genetics ,Genetically modified maize ,biology ,Agrobacterium ,Transgene ,Plant Science ,Agrobacterium tumefaciens ,Genetically modified crops ,biology.organism_classification ,Transformation (genetics) ,Inbred strain ,Cauliflower mosaic virus ,Agronomy and Crop Science ,Biotechnology - Abstract
This study was conducted to develop herbicide-resistance domestic maize plants by introducing the CP4 5-enol-pyruvylshikimate-3-phosphate synthase (CP4 EPSPS) gene using Agrobacterium tumefaciens-mediated immature embryo transformation. Immature embryos of five genotypes (HW1, KL103, HW3, HW4, HW7) were co-cultivated with strains Agrobacterium tumefaciens (strain C58C1) containing the binary vector (pCAMBIA2300) carrying Ubiquitin promoter-CP4 EPSPS gene and Cauliflower mosaic virus 35S (CaMV35S) promoter-nptll gene conferring resistance to paromomycin as a selective agent. The presence and expression of CP4 EPSPS transgene were confirmed by PCR, RT-PCR and Northern blot analysis, respectively. Also, the resistance to glyphosate in the transgenic maize () was analyzed by shikimate accumulation assay. The frequency (%) of paromomycin-resistance callus was 0.37, 0.03, 2.20, 2.37, and 0.81% in pure lines HW1, KL103, HW3, HW4 and HW7, respectively. EPSP transgene sequences were amplified in putative transgenic plants that regenerated from paromomycin-resistance calli of two inbred lines (HW3, HW4). Of them, RT-PCR and Northern blot analyses revealed that the transgene was only expressed in two transgenic events (M266, M104) of HW4 inbred line, and a mild glyphosate resistance of transgenic event (M266) was confirmed by the lower shikimate accumulation in leaf segments. These results demonstrate that transgenic maize with herbicide-resistance traits in Korean genotype can be genetically obtained.
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- 2007
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40. Stress-induced expression of choline oxidase in potato plant chloroplasts confers enhanced tolerance to oxidative, salt, and drought stresses
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Hee-Sik Kim, Raza Ahmad, Sang-Soo Kwak, Suk-Yoon Kwon, Norio Murata, Haeng-Soon Lee, Kyung-Hwa Back, Myoung Duck Kim, and Won Il Chung
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Chloroplasts ,Photoinhibition ,Plant Science ,Oxidative phosphorylation ,Genetically modified crops ,Sodium Chloride ,medicine.disease_cause ,Photosynthesis ,Disasters ,Bacterial Proteins ,Botany ,medicine ,Promoter Regions, Genetic ,Solanum tuberosum ,biology ,Abiotic stress ,fungi ,food and beverages ,General Medicine ,Plants, Genetically Modified ,biology.organism_classification ,Betaine ,Chloroplast ,Alcohol Oxidoreductases ,Oxidative Stress ,Horticulture ,Agronomy and Crop Science ,Oxidative stress ,Solanaceae - Abstract
Transgenic potato plants (Solanum tuberosum L. cv. Superior) with the ability to synthesize glycinebetaine (GB) in chloroplasts (referred to as SC plants) were developed via the introduction of the bacterial choline oxidase (codA) gene under the control of an oxidative stress-inducible SWPA2 promoter. SC1 and SC2 plants were selected via the evaluation of methyl viologen (MV)-mediated oxidative stress tolerance, using leaf discs for further characterization. The GB contents in the leaves of SC1 and SC2 plants following MV treatment were found to be 0.9 and 1.43 micromol/g fresh weight by HPLC analysis, respectively. In addition to reduced membrane damage after oxidative stress, the SC plants evidenced enhanced tolerance to NaCl and drought stress on the whole plant level. When the SC plants were subjected to two weeks of 150 mM NaCl stress, the photosynthetic activity of the SC1 and SC2 plants was attenuated by 38 and 27%, respectively, whereas that of non-transgenic (NT) plants was decreased by 58%. Under drought stress conditions, the SC plants maintained higher water contents and accumulated higher levels of vegetative biomass than was observed in the NT plants. These results indicate that stress-induced GB production in the chloroplasts of GB non-accumulating plants may prove useful in the development of industrial transgenic plants with increased tolerance to a variety of environmental stresses for sustainable agriculture applications.
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- 2007
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41. Overexpression of sweetpotato swpa4 peroxidase results in increased hydrogen peroxide production and enhances stress tolerance in tobacco
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Wan-Keun Song, Cha Young Kim, Haeng-Soon Lee, Sang-Soo Kwak, Yun-Hee Kim, Doo-Sang Park, Suk-Yoon Kwon, and Jae-Wook Bang
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Recombinant Fusion Proteins ,Nicotiana tabacum ,Transgene ,Green Fluorescent Proteins ,Plant Science ,Genetically modified crops ,Sodium Chloride ,Lignin ,Tobacco ,Botany ,Genetics ,Ipomoea batatas ,Peroxidase ,Plant Proteins ,Nicotiana ,biology ,Reverse Transcriptase Polymerase Chain Reaction ,fungi ,food and beverages ,Hydrogen Peroxide ,Blotting, Northern ,Plants, Genetically Modified ,biology.organism_classification ,Adaptation, Physiological ,Molecular biology ,Apoplast ,Point of delivery ,Microscopy, Fluorescence ,biology.protein ,Solanaceae - Abstract
Plant peroxidases (POD) reduce hydrogen peroxide (H(2)O(2)) in the presence of an electron donor. Extracellular POD can also induce H(2)O(2) production and may perform a significant function in responses to environmental stresses via the regulation of H(2)O(2) in plants. We previously described the isolation of 10 POD cDNA clones from cell cultures of sweetpotato (Ipomoea batatas). Among them, the expression of the swpa4 gene was profoundly induced by a variety of abiotic stresses and pathogenic infections (Park et al. in Mol Gen Genome 269:542-552 2003; Jang et al. in Plant Physiol Biochem 42:451-455 2004). In the present study, transgenic tobacco (Nicotiana tabacum) plants overexpressing the swpa4 gene under the control of the CaMV 35S promoter were generated in order to assess the function of swpa4 in planta. The transgenic plants exhibited an approximately 50-fold higher POD specific activity than was observed in control plants. Both transient expression analysis with the swpa4-GFP fusion protein and POD activity assays in the apoplastic washing fluid revealed that the swpa4 protein is secreted into the apoplastic space. In addition, a significantly enhanced tolerance to a variety of abiotic and biotic stresses occurred in the transgenic plants. These plants harbored increased lignin and phenolic content, and H(2)O(2 )was also generated under normal conditions. Furthermore, they showed an increased expression level of a variety of apoplastic acidic pathogenesis-related (PR) genes following enhanced H(2)O(2) production. These results suggest that the expression of swpa4 in the apoplastic space may function as a positive defense signal in the H(2)O(2)-regulated stress response signaling pathway.
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- 2007
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42. Development of Antibiotics Marker-free Potato Having Resistance Against Two Herbicides
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Kui-Hua Li, Seok-Ki Min, Yi-Lan Fang, Suk-Yoon Kwon, Hak-Tae Lim, Jin-Seog Kim, Su Gong, and Hwang-Suk Mo
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medicine.drug_class ,Antibiotics ,Botany ,medicine ,Plant Science ,Marker free ,Biology ,Agronomy and Crop Science ,Biotechnology - Abstract
본 연구에서는 제초제 저항성 bar 유전자 및 CP4-EPSPS 유전자를 포함하는 발현벡터로 형질전환되고 항생제 마커 유전자를 포함하지 않는 제초제 복합 저항성 감자 식물체를 육성하고자 실험하였다. Bar 유전자를 포함하는 pCAMBIA3300에 CaMV35S 프로모터에 의해 조절되는 CP4-EPSPS 유전자를 도입하여 식물체용 발현 운반체를 제작하고, 이를 Agrobacterium tumafaciens EHA105에 도입하였다. 태동밸리 잎 절편체를 Agrobacterium과 공동배양한 다음, phosphinothricin 0.5 mg/L이 첨가된 배지에서 선발하고 호르몬 무처리 MS발근시켜 형질전환체 (E3-6)를 얻었다. PCR, Southern 분석, 효소면역반응 분석 등을 통해 두 가지 유전자가 도입되었으며 이들이 정상적으로 발현됨이 확인되었다. E3-6 식물체는 glufosinate-ammonium의 어린 식물체 잎 도포처리, glyphosate 용액에 치상한 식물체 조직에서의 shikimate 축적 여부 조사를 통하여 조사한 결과, 두 제초제에 대해 저항성을 나타내었다. 또한 형질전환감자의 전식물체에 대해 glyphosate와 glufosinate-ammonium 각각의 용액 또는 이들의 혼합물을 처리한 후 제초활성 반응을 조사한 결과, E3-6 형질전환 감자는 두 제초제를 각각 단독으로 처리할 때나 혼합하여 동시 처리할 때에도 동일한 저항성이 나타남을 확인하였다. 【This study was conducted to develop an antibiotics marker-free potato (Solanum tuberosum L., cv. Taedong valley) plant having resistance against two herbicides. Agrobacterium tumefaciens strain EHA105, harboring a binary vector plasmid pCAMBIA3300 containing bar gene under the control of a promoter CaMV35S and linked CP4-EPSPS genes driven by CaMV35S promoter, was used in the current study. The leaf segments of newly bred potato variety (cv. Taedong Valley) was co-cultured with Agrobacterium. Then, the regenerated individual shoots were excised and transferred to potato multiplication medium supplemented with 0.5 mg/L phosphinothricin. The shoots were rooted in MS medium without hormone and obtained putative transgenic plant E3-6. Integration of target genes into the E3-6 plant and their expression was confirmed by PCR, Southern analysis, and ELISA test. The tissue necrosis test on young leaf blade and shikimic acid accumulation test using the tissue of E3-6 plant were conducted to investigate the resistance to glufosinate-ammonium and glyphosate, respectively. The transgenic plants (E3-6) simultaneously showed a high resistance to both herbicides. The same results were surely obtained also in the whole plants foliar-treated with alone or mixture of two herbicides, glufosinate-ammonium and glyphosate.】
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- 2007
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43. Enhanced tolerance of transgenic sweetpotato plants that express both CuZnSOD and APX in chloroplasts to methyl viologen-mediated oxidative stress and chilling
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Haeng-Soon Lee, Jin-Seog Kim, Suk-Yoon Kwon, Yun-Hee Kim, Sun-Hyung Kim, Soon Lim, Kwang-Yun Cho, Kee-Yoeup Paek, and Sang-Soo Kwak
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biology ,fungi ,food and beverages ,Plant physiology ,Plant Science ,Genetically modified crops ,Photosynthesis ,medicine.disease_cause ,APX ,Superoxide dismutase ,Chloroplast ,Botany ,Genetics ,biology.protein ,medicine ,Agronomy and Crop Science ,Molecular Biology ,Oxidative stress ,Biotechnology ,Peroxidase - Abstract
Oxidative stress is one of the major factors causing injury to plants exposed to environmental stress. Transgenic sweetpotato [Ipomoea batatas (L.) Lam. cv. Yulmi] plants with an enhanced tolerance to multiple environmental stresses were developed by expressing the genes of both CuZn superoxide dismutase (CuZnSOD) and ascorbate peroxidase (APX) under the control of an oxidative stress-inducible SWPA2 promoter in the chloroplasts of sweetpotato plants (referred to as SSA plants). SSA plants were successfully generated by the particle bombardment method and confirmed by PCR analysis. When leaf discs of SSA plants were subjected to 5 μM methyl viologen (MV), they showed approximately 45% less damage than non-transformed (NT) plants. When 200 μM MV was sprayed onto the whole plants, SSA plants showed a significant reduction in visible damage compared to leaves of NT plants, which were almost destroyed. The expression of the introduced CuZnSOD and APX genes in leaves of SSA plants following MV treatment was significantly induced, thereby reflecting increased levels of SOD and APX in the chloroplasts. APX activity in chloroplast fractions isolated from SSA plants was approximately 15-fold higher than that in their counterparts from NT plants. SSA plants treated with a chilling stress consisting of 4°C for 24 h exhibited an attenuated decrease in photosynthetic activity (Fv/Fm) relative to NT plants; furthermore, after 12 h of recovery following chilling, the Fv/Fm of SSA plants almost fully recovered to the initial levels, whereas NT plants remained at a lower level of Fv/Fm activity. These results suggest that SSA plants would be a useful plant crop for commercial cultivation under unfavorable growth conditions. In addition, the manipulation of the antioxidative mechanism in chloroplasts can be applied to the development of various other transgenic crops with an increased tolerance to multiple environmental stresses.
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- 2007
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44. Enhanced tolerance of transgenic potato plants expressing both superoxide dismutase and ascorbate peroxidase in chloroplasts against oxidative stress and high temperature
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Jin-Seog Kim, Sun-Hyung Kim, Kwang Yun Cho, Suk-Yoon Kwon, Jung Sup Choi, Li Tang, Sang-Soo Kwak, Chang K. Sung, and Haeng-Soon Lee
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Paraquat ,Chloroplasts ,Antioxidant ,medicine.medical_treatment ,Plant Science ,Oxidative phosphorylation ,Photosynthesis ,medicine.disease_cause ,Superoxide dismutase ,Ascorbate Peroxidases ,Gene Expression Regulation, Plant ,medicine ,Solanum tuberosum ,biology ,Reverse Transcriptase Polymerase Chain Reaction ,Superoxide Dismutase ,fungi ,Temperature ,food and beverages ,General Medicine ,Plants, Genetically Modified ,biology.organism_classification ,Adaptation, Physiological ,Plant Leaves ,Chloroplast ,Oxidative Stress ,stomatognathic diseases ,Peroxidases ,Biochemistry ,biology.protein ,Agronomy and Crop Science ,Solanaceae ,Oxidative stress ,Peroxidase - Abstract
Oxidative stress is a major damaging factor for plants exposed to environmental stresses. In order to develop transgenic potato plants with enhanced tolerance to environmental stress, the genes of both Cu/Zn superoxide dismutase and ascorbate peroxidase were expressed in chloroplasts under the control of an oxidative stress-inducible SWPA2 promoter (referred to as SSA plants). SSA plants showed enhanced tolerance to 250 microM methyl viologen, and visible damage in SSA plants was one-fourth that of non-transgenic (NT) plants that were almost destroyed. In addition, when SSA plants were treated with a high temperature of 42 degrees C for 20 h, the photosynthetic activity of SSA plants decreased by only 6%, whereas that of NT plants decreased by 29%. These results suggest that the manipulation of the antioxidative mechanism of the chloroplasts may be applied in the development of industrial transgenic crop plants with increased tolerance to multiple environmental stresses.
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- 2006
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45. Molecular characterization of a cDNA encoding copper/zinc superoxide dismutase from cultured cells of Manihot esculenta
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Haeng-Soon Lee, Seung Yong Shin, Soon-Tae Kwon, Sang-Soo Kwak, and Suk-Yoon Kwon
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Paraquat ,DNA, Complementary ,Manihot ,Physiology ,Molecular Sequence Data ,Plant Science ,Biology ,Plant Roots ,Superoxide dismutase ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,Complementary DNA ,Genetics ,Amino Acid Sequence ,Cloning, Molecular ,Gene ,Cells, Cultured ,Gene Library ,Plant Proteins ,chemistry.chemical_classification ,Base Sequence ,Molecular mass ,Superoxide Dismutase ,cDNA library ,Temperature ,food and beverages ,Amino acid ,Plant Leaves ,Oxidative Stress ,Open reading frame ,chemistry ,Biochemistry ,biology.protein - Abstract
Superoxide dismutase (SOD) cDNA, mSOD2, encoding cytosolic copper/zinc SOD (CuZnSOD) cDNA was isolated from suspension-cultured cells of cassava (Manihot esculenta Crantz) by cDNA library screening, and its expression was investigated in relation to environmental stress. mSOD2 is 774 bp in length with an open reading frame (ORF) of 152 amino acids, corresponding to a protein of predicted molecular mass 15 kDa and a pI of 5.22. One copy of the mSOD2 gene was found to be present in the cassava genome by Southern analysis using an mSOD2 cDNA-specific probe. Reverse transcriptase-polymerase chain reaction (RT-PCR) analysis revealed diverse expression patterns for the mSOD2 gene in various tissues of intact cassava plants, at various stages of the growth in suspension cultures, and in the leaf tissues exposed to different stresses. The mSOD2 gene was highly expressed in suspension-cultured cells and in the stems of intact plants. However, it was expressed at low levels in leaves and roots. During suspension cell growth, the mSOD2 transcript progressively increased during culture. Moreover, the mSOD2 gene in excised cassava leaves responded to various stresses in different ways. In particular, it was highly induced in leaf tissue by several abiotic stresses, including high temperature (37 degrees C), chilling (4 degrees C), methyl viologen (MV) exposure, and wounding treatment. These results indicate that the mSOD2 gene is involved in the antioxidative process triggered by oxidative stress induced by environmental change.
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- 2005
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46. Alterations in intracellular and extracellular activities of antioxidant enzymes during suspension culture of sweetpotato
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Sang-Soo Kwak, Baek-Rak Lee, Younghwa Kim, Byungin Meen, Eun Hee Cho, Suk-Yoon Kwon, Gyung-Hye Huh, Jung-Myung Bae, and Yun-Hee Kim
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Time Factors ,Antioxidant ,medicine.medical_treatment ,Cell Culture Techniques ,Plant Science ,Horticulture ,Biology ,Biochemistry ,Isozyme ,Antioxidants ,Superoxide dismutase ,medicine ,Extracellular ,Ipomoea batatas ,Molecular Biology ,Cell Proliferation ,Peroxidase ,chemistry.chemical_classification ,Glutathione Peroxidase ,Superoxide Dismutase ,Glutathione peroxidase ,General Medicine ,chemistry ,Cell culture ,biology.protein ,Intracellular - Abstract
Cultured plant cells are a good system for the study of antioxidant mechanisms and for the mass production of antioxidants, because they can be grown under conditions of high oxidative stress. Alterations in the intracellular and extracellular activities of three antioxidant enzymes, superoxide dismutase (SOD), guaiacol-type peroxidase (POD), and glutathione peroxidase (GPX), were investigated in suspension cultures of sweetpotato (Ipomoea batatas) during cell growth. Intracellular SOD activities (units/mg protein) at 15 days after subculture (DAS) and 30 DAS were 10 and 20 times higher, respectively, compared with the SOD activity at 1 DAS, whereas intracellular specific POD and GPX activities did not significantly increase until after 15 DAS, when they rapidly increased. The extracellular activities of the three enzymes in culture medium were much higher than were the intracellular activities. The change in extracellular SOD activity was similar to that of extracellular GPX during cell growth. Those activities showed high levels until 5 DAS and then significantly decreased. Extracellular POD activity had an almost constant level regardless of the cell growth stage. In addition, intracellular SOD and POD isozymes were quite different from those isozymes in the culture medium. The changes in SOD and POD isozymes observed here suggest that different isozymes might modulate the levels of reactive oxygen intermediates during cell growth. Characterization of extracellular antioxidant enzymes discovered here would provide a new understanding for defense mechanism in plants.
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- 2004
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47. [Untitled]
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Hyun-Sook Kim, Man-Hyun Jo, Suk-Yoon Kwon, Yu-Jeong Jeong, Eun-Mo Lee, Eun-Jeong Kwon, Sang-Soo Kwak, Haeng-Soon Lee, In-Sik Woo, Kazuya Yoshida, and Atsuhiko Shinmyo
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biology ,food and beverages ,Plant physiology ,Bialaphos ,Plant Science ,Agrobacterium tumefaciens ,biology.organism_classification ,Superoxide dismutase ,Transformation (genetics) ,Horticulture ,chemistry.chemical_compound ,Murashige and Skoog medium ,chemistry ,Shoot ,Botany ,Genetics ,biology.protein ,Agronomy and Crop Science ,Molecular Biology ,Cucumis ,Biotechnology - Abstract
Superoxide dismutase (SOD) plays an important role in cellular defense against oxidative stress in aerobic organisms. To generate cucumber (Cucumis sativus L.) fruits producing high yields of SOD for an anti-aging cosmetic material as a plant bioreactor, the CuZnSOD cDNA (mSOD1) from cassava was introduced into cucumber fruits by Agrobacterium-mediated transformation using the ascorbate oxidase promoter with high expression in fruits. The bialaphos-resistant shoots were selected on medium containing MS basal salts, 2 mg l−1 BA, 0.1 mg l−1 IAA, 300 mg l−1 claforan, and 2 mg l−1 bialaphos. After 6 weeks of culture on the selection medium, the shoots were transferred to MS medium containing 1 mg l−1 IAA, 300 mg l−1 claforan, 2 mg l−1 bialaphos to induce roots. Southern blot analysis confirmed that the mSOD1 gene was properly integrated into the nuclear genomes of three cucumber plants tested. The mSOD1 gene was highly expressed in the transgenic cucumber fruits, whereas it was expressed at a low level in the transgenic leaves. The SOD specific activity (units/mg protein) in transgenic fruits was approximately 3 times higher than in those of non-transgenic plants.
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- 2003
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48. [Untitled]
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Kee Yeun Kim, Yun Kang Hur, Jae Wook Bang, Sang Soo Kwak, Heang Soon Lee, and Suk-Yoon Kwon
- Subjects
Regulation of gene expression ,Cloning ,Reporter gene ,Transgene ,fungi ,Mutant ,food and beverages ,Plant Science ,General Medicine ,Genetically modified crops ,Molecular cloning ,Biology ,Molecular biology ,Regulatory sequence ,Genetics ,Agronomy and Crop Science - Abstract
A strong oxidative stress-inducible peroxidase (POD) promoter was cloned from sweetpotato (Ipomoea batatas) and characterized in transgenic tobacco plants and cultured cells in terms of environmental stress. A POD genomic clone (referred to as SWPA2) consisted of 1824 bp of sequence upstream of the translation start site, two introns (743 bp and 97 bp), and a 1073 bp coding region. SWPA2 had previously been found to encode an anionic POD which was highly expressed in response to oxidative stress. The SWPA2 promoter contained several cis-element sequences implicated in oxidative stress such as GCN-4, AP-1, HSTF, SP-1 reported in animal cells and a plant specific G-box. Employing a transient expression assay in tobacco protoplasts, with five different 5'-deletion mutants of the SWPA2 promoter fused to the beta-glucuronidase (GUS) reporter gene, the 1314 bp mutant deletion mutant showed about 30 times higher GUS expression than the CaMV 35S promoter. The expression of GUS activity in transgenic tobacco plants under the control of the -1314 SWPA2 promoter was strongly induced in response to environmental stresses including hydrogen peroxide, wounding and UV treatment. Furthermore, GUS activity in suspension cultures of transgenic cells derived from transgenic tobacco leaves containing the -1314 bp SWPA2 promoter-GUS fusion was strongly expressed after 15 days of subculture compared to other deletion mutants. We anticipate that the -1314 bp SWPA2 promoter will be biotechnologically useful for the development of transgenic plants with enhanced tolerance to environmental stress and particularly transgenic cell lines engineered to produce key pharmaceutical proteins.
- Published
- 2003
- Full Text
- View/download PDF
49. Enhanced stress-tolerance of transgenic tobacco plants expressing a human dehydroascorbate reductase gene
- Author
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Suk-Yoon Kwon, Sun-Mee Choi, Haeng-Soon Lee, Hae-Bok Lee, Young-Ock Ahn, Sang-Soo Kwak, and Yong-Mok Park
- Subjects
Paraquat ,Antioxidant ,Physiology ,Nicotiana tabacum ,medicine.medical_treatment ,Transgene ,Plant Science ,Genetically modified crops ,Sodium Chloride ,chemistry.chemical_compound ,Tobacco ,medicine ,Humans ,Glutathione dehydrogenase (ascorbate) ,biology ,fungi ,food and beverages ,Hydrogen Peroxide ,Glutathione ,Plants, Genetically Modified ,biology.organism_classification ,Ascorbic acid ,Adaptation, Physiological ,Cold Temperature ,Plant Leaves ,chemistry ,Biochemistry ,Oxidoreductases ,Agronomy and Crop Science ,Solanaceae - Abstract
To analyze the physiological role of dehydroascorbate reductase (DHAR, EC 1.8.5.1) catalyzing the reduction of DHA to ascorbate in environmental stress adaptation, T1 transgenic tobacco (Nicotiana tabacum cv. Xanthi) plants expressing a human DHAR gene in chloroplasts were biochemically characterized and tested for responses to various stresses. Fully expanded leaves of transgenic plants had about 2.29 times higher DHAR activity (units/g fresh wt) than non-transgenic (NT) plants. Interestingly, transgenic plants also showed a 1.43 times higher glutathione reductase activity than NT plants. As a result, the ratio of AsA/DHA was changed from 0.21 to 0.48, even though total ascorbate content was not significantly changed. When tobacco leaf discs were subjected to methyl viologen (MV) at 5 mumol/L and hydrogen peroxide (H2O2) at 200 mmol/L, transgenic plants showed about a 40% and 25% reduction in membrane damage relative to NT plants, respectively. Furthermore, transgenic seedlings showed enhanced tolerance to low temperature (15 degrees C) and NaCl (100 mmol/L) compared to NT plants. These results suggest that a human derived DHAR properly works for the protection against oxidative stress in plants.
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- 2003
- Full Text
- View/download PDF
50. Enhanced tolerances of transgenic tobacco plants expressing both superoxide dismutase and ascorbate peroxidase in chloroplasts against methyl viologen-mediated oxidative stress
- Author
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Suk-Yoon Kwon, Yu Jeong Jeong, Ji-Seoung Kim, Sang Soo Kwak, Kwang-Yun Cho, Heang Soon Lee, and Randy D. Allen
- Subjects
biology ,Physiology ,Nicotiana tabacum ,fungi ,food and beverages ,Plant Science ,biology.organism_classification ,APX ,Superoxide dismutase ,Chloroplast ,chemistry.chemical_compound ,Paraquat ,chemistry ,L-ascorbate peroxidase ,Biochemistry ,biology.protein ,Solanaceae ,Peroxidase - Abstract
In order to better understand the role of antioxidant enzymes in plant stress protection mechanisms, transgenic tobacco (Nicotiana tabacum cv. Xanthi) plants were developed that overexpress both superoxide dismutase (SOD) and ascorbate peroxidase (APX) in chloroplasts. These plants were evaluated for protection against methyl viologen (MV, paraquat)-mediated oxidative damage both in leaf discs and whole plants. Transgenic plants that express either chloroplast-targeted CuZnSOD (C) or MnSOD (M) and APX (A) were developed (referred to as CA plants and AM plants, respectively). These plant lines were crossed to produce plants that express all three transgenes (CMA plants and AMC plants). These plants had higher total APX and SOD activities than non-transgenic (NT) plants and exhibit novel APX and SOD isoenzymes not detected in NT plants. As expected, transgenic plants that expressed single SODs showed levels of protection from MV that were only slightly improved compared to NT plants. The expression of either SOD isoform along with APX led to increased protection while expression of both SODs and APX provided the highest levels of protection against membrane damage in leaf discs and visual symptoms in whole plants.
- Published
- 2002
- Full Text
- View/download PDF
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