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1. The pea genome

Author

Kreplak, Jonathan, Madoui, Mohammed-Amin, Labadie, Karine, Aubert, Gregoire, Bayer, Philippe, Capal, P., Klein, Anthony, KOUGBEADJO, Ayité, Vrana, J., Gali, K.K., Fournier, Carine, d'Agata, Léo, Taran, B., Belser, C., Le Paslier, Marie-Christine, Bendahmane, Abdelhafid, Berges, Helene, Barbe, Valérie, McGee, Rebecca, Lichtenzveig, Judith, Coyne, Clarice J., Warkentin, Tom D., Batley, J., Macas, Jiří, Edwards, Dave, Dolezel, Jaroslav, Wincker, Patrick, Burstin, Judith, Agroécologie [Dijon], Université de Bourgogne (UB)-Institut National de la Recherche Agronomique (INRA)-Université Bourgogne Franche-Comté [COMUE] (UBFC)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement, Bayer Cropscience, Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Institut de Génomique, Institute of Experimental Botany of the Czech Academy of Sciences (IEB / CAS), Czech Academy of Sciences [Prague] (CAS), University of Saskatchewan, Etude du Polymorphisme des Génomes Végétaux (EPGV), Institut National de la Recherche Agronomique (INRA), Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Centre National de Ressources Génomiques Végétales (CNRGV), USDA-ARS : Agricultural Research Service, Molecular Biology, Bioinformatics, Evolutionary Biology, Curtin University [Perth], Planning and Transport Research Centre (PATREC)-Planning and Transport Research Centre (PATREC), University of Western Australia, Biology Centre of the Czech Academy of Sciences (BIOLOGY CENTRE CAS), School of Plant Biology, The University of Western Australia (UWA), and Noble Research Institute.

Subjects
[SDV]Life Sciences [q-bio], education, [SDE]Environmental Sciences, food and beverages, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology
Abstract

International audience; The International Pea Genome Consortium Pea (Pisum sativum L.) has long been a model for plant genetics. It is also a widely grown pulse crop producing protein-rich seeds in a sustainable manner. Thanks to large national and international programs, and driven by innovations in sequencing technology, informatics and biotechnology, many genomic resources are now available for pea. An atlas of the expression of its genes in many tissues, high density genetic mapping, and the ongoing sequencing of its genome have provided useful tools for dissecting traits of interest. We will present how the pea genome draft sequence opens the way to explore genetic diversity of pea.

Published
2017

2. The pea genome

Author

Kreplak, Jonathan, Madoui, Mohammed-Amin, Labadie, Karine, Aubert, Gregoire, Bayer, Philippe, Capal, P., Klein, Anthony, Kougbeadjo, Ayité, Vrana, J., Gali, K.K., Fournier, Carine, d'Agata, Léo, Taran, B., Belser, C., Le Paslier, Marie-Christine, Bendahmane, Abdelhafid, Berges, Helene, Barbe, Valérie, Mcgee, Rebecca, Lichtenzveig, Judith, Coyne, Clarice J., Warkentin, Tom D., Batley, J., Macas, Jiří, Edwards, Dave, Dolezel, Jaroslav, Wincker, Patrick, Burstin, Judith, Agroécologie [Dijon], Institut National de la Recherche Agronomique (INRA)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Université Bourgogne Franche-Comté [COMUE] (UBFC), Bayer Cropscience, Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Institut de Génomique, Institute of Experimental Botany of the Czech Academy of Sciences (IEB / CAS), Czech Academy of Sciences [Prague] (CAS), University of Saskatchewan [Saskatoon] (U of S), Etude du Polymorphisme des Génomes Végétaux (EPGV), Institut National de la Recherche Agronomique (INRA), Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Centre National de Ressources Génomiques Végétales (CNRGV), USDA-ARS : Agricultural Research Service, Molecular Biology, Bioinformatics, Evolutionary Biology, Curtin University [Perth], Planning and Transport Research Centre (PATREC)-Planning and Transport Research Centre (PATREC), The University of Western Australia (UWA), Biology Centre of the Czech Academy of Sciences (BIOLOGY CENTRE CAS), School of Plant Biology, and Noble Research Institute.

Subjects
[SDV]Life Sciences [q-bio], education, [SDE]Environmental Sciences, food and beverages, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology
Abstract

BAP GEAPSI INRA; International audience; The International Pea Genome Consortium Pea (Pisum sativum L.) has long been a model for plant genetics. It is also a widely grown pulse crop producing protein-rich seeds in a sustainable manner. Thanks to large national and international programs, and driven by innovations in sequencing technology, informatics and biotechnology, many genomic resources are now available for pea. An atlas of the expression of its genes in many tissues, high density genetic mapping, and the ongoing sequencing of its genome have provided useful tools for dissecting traits of interest. We will present how the pea genome draft sequence opens the way to explore genetic diversity of pea.

Published
2017

3. The pea genome

Author

Kreplak, Jonathan, Madoui, Mohammed-Amin, Labadie, Karine, Aubert, Gregoire, Bayer, Philippe, Capal, P., Klein, Anthony, KOUGBEADJO, Ayité, Vrana, J., Gali, K.K., Fournier, Carine, d'Agata, Léo, Taran, B., Belser, C., Le Paslier, Marie-Christine, Bendahmane, Abdelhafid, Berges, Helene, Barbe, Valérie, McGee, Rebecca, Lichtenzveig, Judith, Coyne, Clarice J., Warkentin, Tom D., Batley, J., Macas, Jiří, Edwards, Dave, Dolezel, Jaroslav, Wincker, Patrick, Burstin, Judith, Agroécologie [Dijon], Université de Bourgogne (UB)-Institut National de la Recherche Agronomique (INRA)-Université Bourgogne Franche-Comté [COMUE] (UBFC)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement, Bayer Cropscience, Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Institut de Génomique, Institute of Experimental Botany of the Czech Academy of Sciences (IEB / CAS), Czech Academy of Sciences [Prague] (CAS), University of Saskatchewan, Etude du Polymorphisme des Génomes Végétaux (EPGV), Institut National de la Recherche Agronomique (INRA), Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Centre National de Ressources Génomiques Végétales (CNRGV), USDA-ARS : Agricultural Research Service, Molecular Biology, Bioinformatics, Evolutionary Biology, Curtin University [Perth], Planning and Transport Research Centre (PATREC)-Planning and Transport Research Centre (PATREC), University of Western Australia, Biology Centre of the Czech Academy of Sciences (BIOLOGY CENTRE CAS), School of Plant Biology, The University of Western Australia (UWA), and Noble Research Institute.

Subjects
[SDV]Life Sciences [q-bio], education, [SDE]Environmental Sciences, food and beverages, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology
Abstract

International audience; The International Pea Genome Consortium Pea (Pisum sativum L.) has long been a model for plant genetics. It is also a widely grown pulse crop producing protein-rich seeds in a sustainable manner. Thanks to large national and international programs, and driven by innovations in sequencing technology, informatics and biotechnology, many genomic resources are now available for pea. An atlas of the expression of its genes in many tissues, high density genetic mapping, and the ongoing sequencing of its genome have provided useful tools for dissecting traits of interest. We will present how the pea genome draft sequence opens the way to explore genetic diversity of pea.

Published
2017

4. The pea genome

Author

Kreplak, Jonathan, Madoui, Mohammed-Amin, Labadie, Karine, Aubert, Gregoire, Bayer, Philippe, Capal, P., Klein, Anthony, Kougbeadjo, Ayité, Vrana, J., Gali, K.K., Fournier, Carine, d'Agata, Léo, Taran, B., Belser, C., Le Paslier, Marie-Christine, Bendahmane, Abdelhafid, Berges, Helene, Barbe, Valérie, Mcgee, Rebecca, Lichtenzveig, Judith, Coyne, Clarice J., Warkentin, Tom D., Batley, J., Macas, Jiří, Edwards, Dave, Dolezel, Jaroslav, Wincker, Patrick, Burstin, Judith, Agroécologie [Dijon], Institut National de la Recherche Agronomique (INRA)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Université Bourgogne Franche-Comté [COMUE] (UBFC), Bayer Cropscience, Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Institut de Génomique, Institute of Experimental Botany of the Czech Academy of Sciences (IEB / CAS), Czech Academy of Sciences [Prague] (CAS), University of Saskatchewan [Saskatoon] (U of S), Etude du Polymorphisme des Génomes Végétaux (EPGV), Institut National de la Recherche Agronomique (INRA), Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Centre National de Ressources Génomiques Végétales (CNRGV), USDA-ARS : Agricultural Research Service, Molecular Biology, Bioinformatics, Evolutionary Biology, Curtin University [Perth], Planning and Transport Research Centre (PATREC)-Planning and Transport Research Centre (PATREC), The University of Western Australia (UWA), Biology Centre of the Czech Academy of Sciences (BIOLOGY CENTRE CAS), School of Plant Biology, and Noble Research Institute.

Subjects
[SDV]Life Sciences [q-bio], education, [SDE]Environmental Sciences, food and beverages, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology
Abstract

BAP GEAPSI INRA; International audience; The International Pea Genome Consortium Pea (Pisum sativum L.) has long been a model for plant genetics. It is also a widely grown pulse crop producing protein-rich seeds in a sustainable manner. Thanks to large national and international programs, and driven by innovations in sequencing technology, informatics and biotechnology, many genomic resources are now available for pea. An atlas of the expression of its genes in many tissues, high density genetic mapping, and the ongoing sequencing of its genome have provided useful tools for dissecting traits of interest. We will present how the pea genome draft sequence opens the way to explore genetic diversity of pea.

Published
2017

5. The pea genome

Author

Kreplak, Jonathan, Madoui, Mohammed-Amin, Labadie, Karine, Aubert, Gregoire, Bayer, Philippe, Capal, P., Klein, Anthony, Kougbeadjo, Ayité, Vrana, J., Gali, K.K., Fournier, Carine, d'Agata, Léo, Taran, B., Belser, C., Le Paslier, Marie-Christine, Bendahmane, Abdelhafid, Bergès, Helene, Barbe, V., McGee, Rebecca, Lichtenzveig, Judith, Coyne, Clarice J., Warkentin, Tom D., Batley, J., Macas, Jiri, Edwards, Dave, Dolezel, Jaroslav, Wincker, Patrick, and Burstin, Judith

Subjects
food and beverages
Abstract

The International Pea Genome Consortium Pea (Pisum sativum L.) has long been a model for plant genetics. It is also a widely grown pulse crop producing protein-rich seeds in a sustainable manner. Thanks to large national and international programs, and driven by innovations in sequencing technology, informatics and biotechnology, many genomic resources are now available for pea. An atlas of the expression of its genes in many tissues, high density genetic mapping, and the ongoing sequencing of its genome have provided useful tools for dissecting traits of interest. We will present how the pea genome draft sequence opens the way to explore genetic diversity of pea.

Published
2017

6. Towards the genome sequence of pea : a tribute to Mendel

Author

Madoui , Mohammed-Amin, Labadie , K., Kreplak , Jonathan, Aubert , Gregoire, d'Agata , Léo, Capal , P., Fournier , Carine, KOUGBEADJO , Ayité, Vrana , J., Gali , K., Taran , B., Belser , C., Le Paslier , Marie-Christine, McGee , Rebecca, Edwards , D., Batley , J., Bendahmane , Abdelhafid, Berges , Helene, Barbe , V., Tayeh , Nadim, Klein , Anthony, Lichtenzveig , Judith, Aury , J-M., Coyne , C.J., Warkentin , T., Dolezel , J., Wincker , P., Burstin , Judith, Institut de Génomique d'Evry (IG), Université Paris-Saclay-Institut de Biologie François JACOB (JACOB), Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Direction de Recherche Fondamentale (CEA) (DRF (CEA)), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Agroécologie [Dijon], Institut National de la Recherche Agronomique (INRA)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement, Institute of Experimental Botany of the Czech Academy of Sciences (IEB / CAS), Czech Academy of Sciences [Prague] (CAS), University of Saskatchewan [Saskatoon] (U of S), Etude du Polymorphisme des Génomes Végétaux (EPGV), Institut National de la Recherche Agronomique (INRA), Grain Legume Genetics Physiology Research, USDA-ARS : Agricultural Research Service, The University of Western Australia (UWA), Institut des Sciences des Plantes de Paris-Saclay (IPS2 (UMR_9213 / UMR_1403)), Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS), Centre National de Ressources Génomiques Végétales (CNRGV), Molecular Biology, Bioinformatics, Evolutionary Biology, Curtin University [Perth], Planning and Transport Research Centre (PATREC)-Planning and Transport Research Centre (PATREC), Western Region Plant Introduction Station, Legume Society., Institut de Biologie François JACOB (JACOB), Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Commissariat à l'énergie atomique et aux énergies alternatives (CEA)-Université Paris-Saclay, Institut National de la Recherche Agronomique (INRA)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Université Bourgogne Franche-Comté [COMUE] (UBFC), Institute of Experimental Botany ASCR, Institut National de la Recherche Agronomique (INRA)-Université Paris-Sud - Paris 11 (UP11)-Université Paris Diderot - Paris 7 (UPD7)-Université d'Évry-Val-d'Essonne (UEVE)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS), Institut National de la Recherche Agronomique (INRA)-Université d'Évry-Val-d'Essonne (UEVE)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Diderot - Paris 7 (UPD7)-Université Paris-Saclay-Université Paris-Sud - Paris 11 (UP11), Génoscope, Institut de Génomique, Commissariat à l'Energie Atomique et aux Energies Alternatives, Institut National de la Recherche Agronomique ( INRA ) -Université de Bourgogne ( UB ) -AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Université Bourgogne Franche-Comté ( UBFC ), University of Saskatchewan [Saskatoon] ( U of S ), Etude du Polymorphisme des Génomes Végétaux ( EPGV ), Institut National de la Recherche Agronomique ( INRA ), USDA-ARS, University of Western Australia, UMR 1403 Institut des Sciences des Plantes de Paris Saclay, Institut National de la Recherche Agronomique ( INRA ) -Université Paris Diderot - Paris 7 ( UPD7 ), Centre National de Ressources Génomiques Végétales ( CNRGV ), and Planning and Transport Research Centre ( PATREC ) -Planning and Transport Research Centre ( PATREC )

Subjects
pea, genome, sequence, [ SDV ] Life Sciences [q-bio], [SDV]Life Sciences [q-bio], food and beverages
Abstract

BAP GEAPSI BAP GEAPSIBAPGEAPSI; Pea (Pisum sativum L.) was the original model organism for Mendel´s discovery of the laws of inheritance and kept this model status until the advent of molecular biology at the end of the 20th century. Pea is also one of the world’s oldest domesticated crops. It is currently the third most widely grown pulse crop, as its seeds serve as a protein-rich food for humans and livestock alike. While several legume species genome's draft sequences have been produced, progress in pea genomics has lagged behind largely as a consequence of its complex and large genome size. The pea genome is large (ca 4.45 Gb), probably resulting from recent expansion of retrotransposons followed by sequence diversification. The Pea Genome International Project has undertaken several complementary strategies in order to produce a high-quality draft sequence of the species. We will present how this draft sequence opens the way to renew strategies in pea breeding.

Published
2016

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