106 results on '"Muhammad, Noman"'
Search Results
2. A Hybrid Group-Based Food Recommender Framework for Handling Overlapping Memberships
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Rao Naveed Bin Rais, Muhammad Noman, Osman Khalid, and Imran A. Khan
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group recommender ,food recommendation ,collaborative filtering ,fuzzy C-means ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Recommender systems (RSs) play a pivotal role in mitigating information overload by aiding individuals or groups in discovering relevant and personalized information. An individual’s food preferences may vary when dining with friends compared to dining with family. Most of the existing group RSs generally assume users to be associated with a single group. However, in real-world scenarios, a user can be part of multiple groups due to overlapping/diverse preferences. This raises several challenges for traditional RSs due to the inherent complexity of group memberships, degrading the effectiveness and accuracy of the recommendations. Computing user to group membership degrees is a complex task, and conventional methods often fall short in accurately capturing the varied preferences of individuals. To address these challenges, we propose an integrated two-stage group recommendation (ITGR) framework that considers users’ simultaneous memberships in multiple groups with conflicting preferences. We employ fuzzy C-means clustering along with collaborative filtering to provide a more flexible and precise approach to membership assignment. Group formation is carried out using similarity thresholds followed by deep neural collaborative filtering (DNCF) to generate the top-k items for each group. Experiments are conducted using a large-scale recipes’ dataset, and the results demonstrate that the proposed model outperforms traditional approaches in terms of group satisfaction, normalized discounted cumulative gain (NDCG), precision, recall, and F1-measure.
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- 2024
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3. Automated Brain Tumor Identification in Biomedical Radiology Images: A Multi-Model Ensemble Deep Learning Approach
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Sarfaraz Natha, Umme Laila, Ibrahim Ahmed Gashim, Khalid Mahboob, Muhammad Noman Saeed, and Khaled Mohammed Noaman
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brain tumor 1 ,MRI 2 ,CNN ,AlexNet ,ensemble model ,transfer learning ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Brain tumors (BT) represent a severe and potentially life-threatening cancer. Failing to promptly diagnose these tumors can significantly shorten a person’s life. Therefore, early and accurate detection of brain tumors is essential, allowing for appropriate treatment and improving the chances of a patient’s survival. Due to the different characteristics and data limitations of brain tumors is challenging problems to classify the three different types of brain tumors. A convolutional neural networks (CNNs) learning algorithm integrated with data augmentation techniques was used to improve the model performance. CNNs have been extensively utilized in identifying brain tumors through the analysis of Magnetic Resonance Imaging (MRI) images The primary aim of this research is to propose a novel method that achieves exceptionally high accuracy in classifying the three distinct types of brain tumors. This paper proposed a novel Stack Ensemble Transfer Learning model called “SETL_BMRI”, which can recognize brain tumors in MRI images with elevated accuracy. The SETL_BMRI model incorporates two pre-trained models, AlexNet and VGG19, to improve its ability to generalize. Stacking combined outputs from these models significantly improved the accuracy of brain tumor detection as compared to individual models. The model’s effectiveness is evaluated using a public brain MRI dataset available on Kaggle, containing images of three types of brain tumors (meningioma, glioma, and pituitary). The experimental findings showcase the robustness of the SETL_BMRI model, achieving an overall classification accuracy of 98.70%. Additionally, it delivers an average precision, recall, and F1-score of 98.75%, 98.6%, and 98.75%, respectively. The evaluation metric values of the proposed solution indicate that it effectively contributed to previous research in terms of achieving high detection accuracy.
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- 2024
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4. Untargeted screening of plant metabolites based on data-independent and data-dependent acquisition modes using LC-ESI-QTOF-MS: Tribulus terrestris L. as a case study
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Syed Muhammad Zaki Shah, Muhammad Ramzan, Muhammad Noman Khan, Hamna Shadab, Muhammad Usman, Saeedur Rahman, Arslan Ali, Jalal Uddin, Mufarreh Asmari, and Syed Ghulam Musharraf
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Data-independent acquisition (DIA) ,MS-DIAL ,Skyline ,Tribulus terrestris ,Liquid-chromatography-mass-spectrometry (LC-MS) ,Chemistry ,QD1-999 - Abstract
Metabolomics has been used as a powerful tool for the analysis, and drug-lead identification in medicinal plants and herbal medicines. For the coverage of a broader range of plant-based metabolites using LC-MS, one of the important parameters is the selection of analysis mode and data processing for identification. This paper describes the utility of two distinctive acquisition modes in combination, a classic data-dependent acquisition (DDA) mode and a data-independent acquisition (DIA) mode for obtaining the mass spectrometry data of plant extracts using LC-ESI-QTOF/MS. Tribulus terrestris plant was used as a case study. We have applied three-step data analysis pipeline 1-annotation and putative identification of metabolites, 2-validation, and relative quantification, and 3-multivariate analysis using open-access MS-DIAL, Skyline, and Perseus software. A total of four samples of T. terrestris (aqueous extracts), two fruits, and two whole plant samples, from two different regions, were used. By combining data analysis results of plant fruit samples from two different regions, a total of 95 and 77 metabolites were identified in positive and negative ionization modes, respectively. Similarly, in the analysis of the whole plant from two different regions, 75 and 76 metabolites were identified in positive and negative ionization modes, respectively. We suggested the use of DDA mode for annotation, identification of metabolites, and generation of transition lists in MS-DIAL, furthermore, the use of DIA acquisition mode for enhancing metabolites sensitivity in complex samples, deconvolute MS1/MS2 spectra in Skyline for the quantitative performance and analytical reliability. The developed protocol can be used for the broader coverage of plant-based metabolites.
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- 2023
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5. Rapid analysis of flavonoids based on spectral library development in positive ionization mode using LC-HR-ESI-MS/MS
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Nudrat Aziz, Muhammad Noman Khan, Arslan Ali, Adeeba Khadim, Abdullatif Bin Muhsinah, Jalal Uddin, and Syed Ghulam Musharraf
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Flavonoids ,High resolution mass spectral library ,Tea sample ,MS/MS features ,Medicinal values ,Chemistry ,QD1-999 - Abstract
Natural product screening in plants has always been a difficult task due to the complex nature of the plant material and diverse structures of the compounds present in them. Flavonoids are important and diverse class of plant secondary metabolites with numerous medicinal activities. The present study focuses on the development of a high-resolution tandem mass spectral library for the rapid and authentic identification of common flavonoids. A total of forty flavonoid standards belong to class flavones, isoflavones, flavanones, flavanols and anthocyanins were pooled into two solutions applying logP-based strategy. The flavonoids were analyzed using LC-QTOF-MS high-resolution mass spectrometer with optimization of different instrumental parameters to achieve good sensitivity. The library was built by incorporating names, molecular formulae, exact masses, and MS, and MS/MS spectra of analyzed flavonoids using Bruker Library Editor tool. The fragmentation pattern observed for the standard compounds were compared to the fragments reported in the literature. To assess the practical implications, an extract of tea sample was analyzed and screened using the developed library, which resulted in the identification of three common flavonoids based on their HR-ESI-MS/MS spectral features. The established LC-HR-MS/MS method can be used for the targeted identification of flavonoids in complex samples like food material from different botanical families.
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- 2022
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6. Cross-mixing study of a poisonous Cestrum species, Cestrum diurnum in herbal raw material by chemical fingerprinting using LC-ESI-QTOF-MS/MS
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Hamna Shadab, Muhammad Noman Khan, Faraz Ul Haq, Hamad Ali, Hesham R. El-Seedi, and Syed Ghulam Musharraf
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LC-ESI-MS/MS ,Chemical fingerprinting ,Quantification ,Adulteration ,Cytotoxicity ,Chemistry ,QD1-999 - Abstract
Poisonous plants are widely distributed and may have risk of phytotoxicity upon mixing with medicinal plants. Several species of Cestrum genus are poisonous and linked with many serious health issues. In the present study, cross-mixing of a toxic plant, Cestrum diurnum with morphologically resembling medicinal plant, Adhatoda vasica was studied using chemical fingerprinting approach. LC-ESI-MS/MS tool was used to develop the chemical fingerprints of three toxic species of Cestrum, including, C. diurnum, C. nocturnum and C. parqui. Total forty-three compounds were identified using high-resolution LC-ESI-MS/MS data comparison. Chemometric analyses were done to compare the distribution of identified compounds present in these Cestrum species. One of the identified compounds, nornicotine (a toxic compound) was also quantified using LC-IT-MS/MS. Adulteration study was conducted by mixing toxic C. diurnum in A. vasica with various ratios (w/w) and five differentiable compounds were identified to detect the adulteration. The method was able to detect up to the limit of 5% mixing of toxic C. diurnum. Moreover, cytotoxicity of the methanolic extracts of these three species were also studied on normal human PBMC (peripheral blood mononuclear cells) and all found to be toxic, while the C. nocturnum showed the highest level of toxicity with the IC50 12.5 μg/mL.
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- 2020
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7. Academic Teaching Quality Framework and Performance Evaluation Using Machine Learning
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Ahmad Almufarreh, Khaled Mohammed Noaman, and Muhammad Noman Saeed
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e-learning ,machine learning ,teacher performance ,learning analytics ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Higher education institutions’ principal goal is to give their learners a high-quality education. The volume of research data gathered in the higher education industry has increased dramatically in recent years due to the fast development of information technologies. The Learning Management System (LMS) also appeared and is bringing courses online for an e-learning model at almost every level of education. Therefore, to ensure the highest level of excellence in the higher education system, finding information for predictions or forecasts about student performance is one of many tasks for ensuring the quality of education. Quality is vital in e-learning for several reasons: content, user experience, credibility, and effectiveness. Overall, quality is essential in e-learning because it helps ensure that learners receive a high-quality education and can effectively apply their knowledge. E-learning systems can be made more effective with machine learning, benefiting all stakeholders of the learning environment. Teachers must be of the highest caliber to get the most out of students and help them graduate as academically competent and well-rounded young adults. This research paper presents a Quality Teaching and Evaluation Framework (QTEF) to ensure teachers’ performance, especially in e-learning/distance learning courses. Teacher performance evaluation aims to support educators’ professional growth and better student learning environments. Therefore, to maintain the quality level, the QTEF presented in this research is further validated using a machine learning model that predicts the teachers’ competence. The results demonstrate that when combined with other factors particularly technical evaluation criteria, as opposed to strongly associated QTEF components, the anticipated result is more accurate. The integration and validation of this framework as well as research on student performance will be performed in the future.
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- 2023
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8. Effect of the Nanoparticle Exposures on the Tomato Bacterial Wilt Disease Control by Modulating the Rhizosphere Bacterial Community
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Hubiao Jiang, Luqiong Lv, Temoor Ahmed, Shaomin Jin, Muhammad Shahid, Muhammad Noman, Hosam-Eldin Hussein Osman, Yanli Wang, Guochang Sun, Xuqing Li, and Bin Li
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16S ribosomal RNA ,antioxidants ,microbiome ,nanopesticides ,nanotechnology ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Ralstonia Solanacearum is one of the most infectious soil-borne bacterial plant pathogens, causing tomato bacterial wilt (TBW). Nanotechnology is an emerging area of research, particularly the application of nanoparticles (NPs) as nanopesticides to manage plant disease is gaining attention nowadays. However, the interaction between NPs and rhizosphere bacterial communities remains largely elusive. This study indicated that metal NPs (CuO, ZnO, and FeO) reduced the incidence of bacterial wilt to varying degrees and affected the composition and structure of the rhizosphere bacterial community. The results revealed that the application of metal oxide NPs can improve the morphological and physiological parameters of TBW infected tomato plants. Among all, CuONPs amendments significantly increase the Chao1 and Shannon index. In the early stage (the second week), it significantly reduces the relative abundance of pathogens. However, the relative abundance of beneficial Streptomyces bacteria increased significantly, negatively correlated with the relative abundance of pathogenic bacteria. In addition, the nano-treatment group will enrich some potential beneficial bacteria such as species from Sphingomonadaceae, Rhizobiaceae, etc. In general, our research provides evidence and strategies for preventing and controlling soil-borne disease tomato bacterial wilt with metal oxide NPs.
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- 2021
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9. Plant–Microbiome Crosstalk: Dawning from Composition and Assembly of Microbial Community to Improvement of Disease Resilience in Plants
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Muhammad Noman, Temoor Ahmed, Usman Ijaz, Muhammad Shahid, Azizullah, Dayong Li, Irfan Manzoor, and Fengming Song
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microbiome engineering ,microbiota ,pathogens ,plant–microbe interactions ,rhizosphere ,root exudates ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Plants host diverse but taxonomically structured communities of microorganisms, called microbiome, which colonize various parts of host plants. Plant-associated microbial communities have been shown to confer multiple beneficial advantages to their host plants, such as nutrient acquisition, growth promotion, pathogen resistance, and environmental stress tolerance. Systematic studies have provided new insights into the economically and ecologically important microbial communities as hubs of core microbiota and revealed their beneficial impacts on the host plants. Microbiome engineering, which can improve the functional capabilities of native microbial species under challenging agricultural ambiance, is an emerging biotechnological strategy to improve crop yield and resilience against variety of environmental constraints of both biotic and abiotic nature. This review highlights the importance of indigenous microbial communities in improving plant health under pathogen-induced stress. Moreover, the potential solutions leading towards commercialization of proficient bioformulations for sustainable and improved crop production are also described.
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- 2021
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10. Acidic and enzymatic saccharification of waste agricultural biomass for biotechnological production of xylitol
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Abdul Ghaffar, Muhammad Yameen, Nosheen Aslam, Fatima Jalal, Razia Noreen, Bushra Munir, Zahed Mahmood, Sadaf Saleem, Naila Rafiq, Sadia Falak, Imtiaz Mahmood Tahir, Muhammad Noman, Muhammad Umar Farooq, Samina Qasim, and Farooq Latif
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Acid hydrolysis ,Yeast fermentation ,Xylitol yield and productivity ,Chemistry ,QD1-999 - Abstract
Abstract Background The plant biomass and agro-industrial wastes show great potential for their use as attractive low cost substrates in biotechnological processes. Wheat straw and corn cob as hemicellulosic substrates were acid hydrolyzed and enzymatically saccharified for high xylose production. The hydrolysate was concentrated and fermented by using Saccharomyces cerevisiae and Kluyveromyces for production of xylitol. Results Acid hydrolysis of wheat straw and corn cob in combination with enzymatic hydrolysis showed great potential for production of free sugars from these substrates. Kluyveromyces produced maximum xylitol from acid treated wheat straw residues with enzymatic saccharification. The percentage xylitol yield was 89.807 g/L and volumetric productivity of 0.019 g/L/h. Kluyveromyces also produced maximum xylitol from corn cob acid hydrolyzed liquor with xylitol yield 87.716 g/L and volumetric productivity 0.018 g/L/h. Conclusion Plant and agro-industrial biomass can be used as a carbohydrate source for the production of xylitol and ethanol after microbial fermentation. This study revealed that wheat straw acid and enzyme hydrolyzed residue proved to be best raw material for production of xylitol with S. cerevisiae. The xylitol produced can be utilized in pharmaceuticals after purification on industrial scale as pharmaceutical purposes.
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- 2017
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11. Bioinspired Green Synthesis of Zinc Oxide Nanoparticles from a Native Bacillus cereus Strain RNT6: Characterization and Antibacterial Activity against Rice Panicle Blight Pathogens Burkholderia glumae and B. gladioli
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Temoor Ahmed, Zhifeng Wu, Hubiao Jiang, Jinyan Luo, Muhammad Noman, Muhammad Shahid, Irfan Manzoor, Khaled S. Allemailem, Faris Alrumaihi, and Bin Li
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antibacterial activity ,biosynthesis ,nanopesticides ,rice pathogen ,ZnONPs ,Chemistry ,QD1-999 - Abstract
Burkholderia glumae and B. gladioli are seed-borne rice pathogens that cause bacterial panicle blight (BPB) disease, resulting in huge rice yield losses worldwide. However, the excessive use of chemical pesticides in agriculture has led to an increase in environmental toxicity. Microbe-mediated nanoparticles (NPs) have recently gained significant attention owing to their promising application in plant disease control. In the current study, we biologically synthesize zinc oxide nanoparticles (ZnONPs) from a native Bacillus cereus RNT6 strain, which was taxonomically identified using 16S rRNA gene analysis. The biosynthesis of ZnONPs in the reaction mixture was confirmed by using UV–Vis spectroscopy. Moreover, XRD, FTIR, SEM-EDS, and TEM analysis revealed the functional groups, crystalline nature, and spherical shape of ZnONPs with sizes ranging from 21 to 35 nm, respectively. Biogenic ZnONPs showed significant antibacterial activity at 50 µg mL−1 against B. glumae and B. gladioli with a 2.83 cm and 2.18 cm zone of inhibition, respectively, while cell numbers (measured by OD600) of the two pathogens in broth culture were reduced by 71.2% and 68.1%, respectively. The ultrastructure studies revealed the morphological damage in ZnONPs-treated B. glumae and B. gladioli cells as compared to the corresponding control. The results of this study revealed that ZnONPs could be considered as promising nanopesticides to control BPB disease in rice.
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- 2021
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12. Effect of the Nanoparticle Exposures on the Tomato Bacterial Wilt Disease Control by Modulating the Rhizosphere Bacterial Community
- Author
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Hubiao Jiang, Luqiong Lv, Temoor Ahmed, Shaomin Jin, Muhammad Shahid, Muhammad Noman, Hosam-Eldin Osman, Yanli Wang, Guochang Sun, Xuqing Li, and Bin Li
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QH301-705.5 ,microbiome ,Catalysis ,Article ,Inorganic Chemistry ,Solanum lycopersicum ,16S ribosomal RNA ,antioxidants ,nanopesticides ,nanotechnology ,Gene Regulatory Networks ,Physical and Theoretical Chemistry ,Biology (General) ,Molecular Biology ,QD1-999 ,Spectroscopy ,Plant Diseases ,Principal Component Analysis ,Microbiota ,Organic Chemistry ,fungi ,Discriminant Analysis ,food and beverages ,Oxides ,General Medicine ,Biodiversity ,Computer Science Applications ,Chemistry ,Metals ,Rhizosphere ,Ralstonia solanacearum ,Nanoparticles ,Biomarkers - Abstract
Ralstonia Solanacearum is one of the most infectious soil-borne bacterial plant pathogens, causing tomato bacterial wilt (TBW). Nanotechnology is an emerging area of research, particularly the application of nanoparticles (NPs) as nanopesticides to manage plant disease is gaining attention nowadays. However, the interaction between NPs and rhizosphere bacterial communities remains largely elusive. This study indicated that metal NPs (CuO, ZnO, and FeO) reduced the incidence of bacterial wilt to varying degrees and affected the composition and structure of the rhizosphere bacterial community. The results revealed that the application of metal oxide NPs can improve the morphological and physiological parameters of TBW infected tomato plants. Among all, CuONPs amendments significantly increase the Chao1 and Shannon index. In the early stage (the second week), it significantly reduces the relative abundance of pathogens. However, the relative abundance of beneficial Streptomyces bacteria increased significantly, negatively correlated with the relative abundance of pathogenic bacteria. In addition, the nano-treatment group will enrich some potential beneficial bacteria such as species from Sphingomonadaceae, Rhizobiaceae, etc. In general, our research provides evidence and strategies for preventing and controlling soil-borne disease tomato bacterial wilt with metal oxide NPs.
- Published
- 2022
13. Tinkering Cis Motifs Jigsaw Puzzle Led to Root-Specific Drought-Inducible Novel Synthetic Promoters
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Aysha Jameel, Muhammad Noman, Weican Liu, Naveed Ahmad, Fawei Wang, Xiaowei Li, and Haiyan Li
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synthetic promoter ,drought stress ,gus reporter gene ,soybean hairy roots ,transgenic arabidopsis ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Following an in-depth transcriptomics-based approach, we first screened out and analyzed (in silico) cis motifs in a group of 63 drought-inducible genes (in soybean). Six novel synthetic promoters (SynP14-SynP19) were designed by concatenating 11 cis motifs, ABF, ABRE, ABRE-Like, CBF, E2F-VARIANT, G-box, GCC-Box, MYB1, MYB4, RAV1-A, and RAV1-B (in multiple copies and various combination) with a minimal 35s core promoter and a 222 bp synthetic intron sequence. In order to validate their drought-inducibility and root-specificity, the designed synthetic assemblies were transformed in soybean hairy roots to drive GUS gene using pCAMBIA3301. Through GUS histochemical assay (after a 72 h 6% PEG6000 treatment), we noticed higher glucuronidase activity in transgenic hairy roots harboring SynP15, SynP16, and SynP18. Further screening through GUS fluorometric assay flaunted SynP16 as the most appropriate combination of efficient drought-responsive cis motifs. Afterwards, we stably transformed SynP15, SynP16, and SynP18 in Arabidopsis and carried out GUS staining as well as fluorometric assays of the transgenic plants treated with simulated drought stress. Consistently, SynP16 retained higher transcriptional activity in Arabidopsis roots in response to drought. Thus the root-specific drought-inducible synthetic promoters designed using stimulus-specific cis motifs in a definite fashion could be exploited in developing drought tolerance in soybean and other crops as well. Moreover, the rationale of design extends our knowledge of trial-and-error based cis engineering to construct synthetic promoters for transcriptional upgradation against other stresses.
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- 2020
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14. Synthesis of yttrium and cerium doped ZnO nanoparticles as highly inexpensive and stable photocatalysts for hydrogen evolution
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Mian Faisal Manzoor, Muhammad Wajid, Mukhtar Ahmad, Ejaz Ahmed, Anwar Manzoor Rana, Muhammad Noman, Muhammad Shoaib Akhtar, Waheed Qamar Khan, and Irshad Ahmad
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Materials science ,Diffuse reflectance infrared fourier transform ,Scanning electron microscope ,Inorganic chemistry ,Energy-dispersive X-ray spectroscopy ,chemistry.chemical_element ,02 engineering and technology ,General Chemistry ,Yttrium ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Dielectric spectroscopy ,Cerium ,chemistry ,X-ray photoelectron spectroscopy ,Geochemistry and Petrology ,Photocatalysis ,0210 nano-technology - Abstract
Yttrium and cerium co-doped ZnO nanoparticles were synthesized by combustion route and characterized using X-ray diffraction (XRD), scanning electron microscopy (SEM), Brunauer-Emmett-Teller (BET), energy dispersive spectroscopy (EDS), X-ray photoelectron spectroscopy (XPS), UV-visible diffuse reflectance spectroscopy (UV-vis DRS), photoluminescence (PL) and electrochemical impedance spectroscopy (EIS) techniques. The introduction of yttrium ions has efficiently increased the relative percentage of Ce3+ ions in ZnO. Yttrium and cerium co-doped ZnO shows efficient photo activity for hydrogen evolution (10.61 mmol/((g·h)) higher than previously reported optimal value for rare earth co-doped ZnO photocatalysts. This remarkably increased hydrogen evolution can be ascribed to the synergy between electronic anchoring effect of Y3+/Y2+ and Ce4+/Ce3+ redox couples. This report presents new idea for the synthesis of efficient photocatalyst using economical route and ion anchoring effect. The hydrogen evolution was also tested using Na2S and Na2SO3 as electron donors under visible light illumination. The synthesized photocatalysts also exhibit high stability.
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- 2021
15. Myoglobin and C-reactive protein are efficient and reliable early predictors of COVID-19 associated mortality
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Ashaq Ali, Xian-En Zhang, Rong Zhang, Xiaohua Chen, Yong Guo, Yong Qi, Muhammad Noman, Xu Liu, Yang Zheng, Juan Zhou, and Dong Men
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Male ,Disease ,Comorbidity ,030204 cardiovascular system & hematology ,Gastroenterology ,Severity of Illness Index ,chemistry.chemical_compound ,0302 clinical medicine ,030212 general & internal medicine ,Signs and symptoms ,Aged, 80 and over ,Multidisciplinary ,biology ,Myoglobin ,Middle Aged ,Thorax ,C-Reactive Protein ,Medicine ,Female ,medicine.medical_specialty ,Multiple Organ Failure ,Science ,Article ,03 medical and health sciences ,Medical research ,Internal medicine ,Severity of illness ,medicine ,Humans ,Survival analysis ,Aged ,Retrospective Studies ,business.industry ,SARS-CoV-2 ,C-reactive protein ,Troponin I ,Health care ,COVID-19 ,Retrospective cohort study ,medicine.disease ,Troponin ,Survival Analysis ,chemistry ,Risk factors ,biology.protein ,business ,Tomography, X-Ray Computed ,Biomarkers - Abstract
Since the emergence of SARS-CoV-2, numerous studies have been attempting to determine biomarkers, which could rapidly and efficiently predict COVID-19 severity, however there is lack of consensus on a specific one. This retrospective cohort study is a comprehensive analysis of the initial symptoms, comorbidities and laboratory evaluation of patients, diagnosed with COVID-19 in Huoshenshan Hospital, Wuhan, from 4th February to 12th March, 2020. Based on the data collected from 63 severely ill patients from the onset of symptoms till the full recovery or demise, we found not only age (average 70) but also blood indicators as significant risk factors associated with multiple organ failure. The blood indices of all patients showed hepatic, renal, cardiac and hematopoietic dysfunction with imbalanced coagulatory biomarkers. We noticed that the levels of LDH (85%, P
- Published
- 2021
16. Overexpression of GmCAMTA12 Enhanced Drought Tolerance in Arabidopsis and Soybean
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Muhammad Noman, Aysha Jameel, Wei-Dong Qiang, Naveed Ahmad, Wei-Can Liu, Fa-Wei Wang, and Hai-Yan Li
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arabidopsis ,cam (calmodulin) ,calmodulin-binding transcription activators (camta) ,cis-elements ,drought ,qpcr ,soybean hairy roots ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Fifteen transcription factors in the CAMTA (calmodulin binding transcription activator) family of soybean were reported to differentially regulate in multiple stresses; however, their functional analyses had not yet been attempted. To characterize their role in stresses, we first comprehensively analyzed the GmCAMTA family in silico and thereafter determined their expression pattern under drought. The bioinformatics analysis revealed multiple stress-related cis-regulatory elements including ABRE, SARE, G-box and W-box, 10 unique miRNA (microRNA) targets in GmCAMTA transcripts and 48 proteins in GmCAMTAs’ interaction network. We then cloned the 2769 bp CDS (coding sequence) of GmCAMTA12 in an expression vector and overexpressed in soybean and Arabidopsis through Agrobacterium-mediated transformation. The T3 (Transgenic generation 3) stably transformed homozygous lines of Arabidopsis exhibited enhanced tolerance to drought in soil as well as on MS (Murashige and Skoog) media containing mannitol. In their drought assay, the average survival rate of transgenic Arabidopsis lines OE5 and OE12 (Overexpression Line 5 and Line 12) was 83.66% and 87.87%, respectively, which was ~30% higher than that of wild type. In addition, the germination and root length assays as well as physiological indexes such as proline and malondialdehyde contents, catalase activity and leakage of electrolytes affirmed the better performance of OE lines. Similarly, GmCAMTA12 overexpression in soybean promoted drought-efficient hairy roots in OE chimeric plants as compare to that of VC (Vector control). In parallel, the improved growth performance of OE in Hoagland-PEG (polyethylene glycol) and on MS-mannitol was revealed by their phenotypic, physiological and molecular measures. Furthermore, with the overexpression of GmCAMTA12, the downstream genes including AtAnnexin5, AtCaMHSP, At2G433110 and AtWRKY14 were upregulated in Arabidopsis. Likewise, in soybean hairy roots, GmELO, GmNAB and GmPLA1-IId were significantly upregulated as a result of GmCAMTA12 overexpression and majority of these upregulated genes in both plants possess CAMTA binding CGCG/CGTG motif in their promoters. Taken together, we report that GmCAMTA12 plays substantial role in tolerance of soybean against drought stress and could prove to be a novel candidate for engineering soybean and other plants against drought stress. Some research gaps were also identified for future studies to extend our comprehension of Ca-CaM-CAMTA-mediated stress regulatory mechanisms.
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- 2019
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17. Effect of IoT Capabilities and Energy Consumption behavior on Green Supply Chain Integration
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Muhammad Noman Shafique, Ammar Rashid, Imran Sarwar Bajwa, Rafaqat Kazmi, Muhammad Mahboob Khurshid, and Wardah Ahmad Tahir
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internet of things ,energy consumption behavior ,green training ,green supply chain performance ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The Internet of Things (IoT) is the next generation of internet-connected information communication technologies (ICT). IoT typically integrates supply chain activities to enhance green supply chain performance (GSCP). Since every organization has different IoT capabilities in comparison with other organizations, GSCP can enable supply chain integration activities for enhanced performance. The implementation of an IoT system can reduce the consumption of organizational resources like energy, electricity, and time and can increase the operational speed to gain better logistics and, ultimately, improved supply chain performance. This study has developed and empirically tested the relationship between IoT capabilities, energy consumption behavior (ECB), supply chain integration, green training (GT), and supply chain practices. Such a multidisciplinary relationship has not previously been established in the literature. The proposed study can fulfill the literature gap and opens new horizons for interdisciplinary research. Data used in this study are collected through offline and online survey methods. A total number of 250 out of 400 respondents participated in the survey. Data has been analyzed through partial least square—structure equation modeling (PLS—SEM) technique. The results of this study empirically test the developed model. IoT has a positive effect on supplier integration (SI), and customer integration (CI). Furthermore, SI and CI have a mediating role between IoT and GSCP, and GT has a positive impact on GSCP. It is concluded that the implementation of IoT can integrate CI and SI to increase GSCP. GT and ECB can ultimately improve GSCP. Additionally, the use of technology and GT can motivate employees to save energy and protect the environment to increase GSCP.
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- 2018
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18. Improving the light absorption efficiency in thin-film plasmonic tandem solar cell
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Muhammad Imran, Aimal Daud Khan, Muhammad Noman, Zulfiqar Ali, Wahid Amin, and Adnan Daud Khan
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Amorphous silicon ,Plasmonic nanoparticles ,Materials science ,business.industry ,Photovoltaic system ,Physics::Optics ,Atomic and Molecular Physics, and Optics ,chemistry.chemical_compound ,Optics ,chemistry ,Crystalline silicon ,Thin film ,Surface plasmon resonance ,business ,Absorption (electromagnetic radiation) ,Plasmon - Abstract
Recently, thin-film solar cells have received much attention due to low production cost. However, such cells suffer from low efficiency due to which they cannot be used for practical applications. To cater this problem, we have numerically investigated thin-film tandem solar cells comprising of double active layers made of amorphous silicon (a-Si) and crystalline silicon (c-Si) of different energy bandgaps. The tandem cell is found to absorb large amount of solar photons compared to a single a-Si and c-Si solar cells. To further improve the absorption efficiency, we efficiently utilized the surface plasmon resonance (SPR) effect of plasmonic nanoparticles, which are deposited in the form of a square lattice in the top a-Si active layer. The absorption characteristics of the cell are enhanced and tuned by optimizing the material and size of the nanoparticles. Moreover, periodic disorders are incorporated, which allow mixing of plasmonic modes having different angular momenta, resulting in a super broadband light absorption from 300 to 1100 nm and yielding a short circuit current density of 33.917 mA/cm2 in the active layers. The proposed plasmonic tandem cell can be advantageous for most of the photovoltaic applications.
- Published
- 2021
19. Study of Sulfosuccinate and Extended Sulfated Sodium Surfactants on the Malaysian Crude/Water Properties for ASP Application in Limestone
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Wan Rosli Wan Sulaiman, Azza Hashim Abbas, and Muhammad Noman Khan
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chemistry.chemical_classification ,Multidisciplinary ,Sodium ,Drop (liquid) ,010102 general mathematics ,chemistry.chemical_element ,Polymer ,01 natural sciences ,Contact angle ,Surface tension ,Chemical engineering ,Pulmonary surfactant ,chemistry ,Wetting ,Enhanced oil recovery ,0101 mathematics - Abstract
Among the successful methods in enhanced oil recovery (EOR) is the chemical EOR. The surfactant-based chemical techniques are highly recommended. However, some drawbacks remained unsolved such as surfactant selection and application in the reservoirs. Surfactants are particularly applied in sandstone reservoirs, so paving the path to expand the implementation to limestone reservoirs is required. Recently, alkaline surfactant polymer (ASP) was suggested for limestone reservoirs in Malaysia. However, limited studies discussed the effect of surfactant screening on the process. Thus, this study investigates the influence of sulfosuccinate and extended sulfated sodium surfactants in improving ASP performance. The evaluation considered the interfacial tension, wettability and recovery factor. The approach used was two-stage experiments of surfactant analysis and ASP core flooding. The first step used the drop Kruss spinning drop tensiometer, and data physics equipment drop shape analyzer to analyze the IFT and the contact angle. The second stage included the limestone sandpack preparation and characterization, followed by ASP flooding. The results showed that single surfactant has low IFT between 0.005 and 0.05 mN/m, while significantly, the synergy of surfactant mixtures has ultra-low IFT of 0.0006–0.001 mN/m. The contact angle results showed a drastic alteration of 65–81% reduction. The cationic surfactants achieved complete water-wet on limestone. The sandpack preparation confirmed acceptable uniformity by the histogram identification. The oil recovery proved additional recovery between 22 and 40%. The results of this research are a step forward to attain the technical feasibility of ASP in limestone reservoirs.
- Published
- 2021
20. RAG-FW: A Hybrid Convolutional Framework for the Automated Extraction of Retinal Lesions and Lesion-Influenced Grading of Human Retinal Pathology
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Taimur Hassan, Naoufel Werghi, Muhammad Usman Akram, and Muhammad Noman Nazir
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medicine.medical_specialty ,Feature extraction ,02 engineering and technology ,Retina ,Lesion ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Retinal Diseases ,Health Information Management ,Optical coherence tomography ,Ophthalmology ,Image Processing, Computer-Assisted ,0202 electrical engineering, electronic engineering, information engineering ,medicine ,Humans ,Electrical and Electronic Engineering ,Retinal pathology ,Grading (tumors) ,medicine.diagnostic_test ,business.industry ,Retinal ,medicine.disease ,Computer Science Applications ,medicine.anatomical_structure ,chemistry ,030221 ophthalmology & optometry ,020201 artificial intelligence & image processing ,medicine.symptom ,business ,Tomography, Optical Coherence ,Biotechnology ,Retinopathy - Abstract
[Submitted in IEEE J-BHI]Retinopathy refers to any damage in the retina that causes visual impairments or even blindness. Identification of retinal lesions plays a vital role in accurately grading retinopathy and for its effective treatment. Optical coherence tomography (OCT) imaging is the most popular non-invasive technique used for the retinal examination due to its ability to screen abnormalities in early stages. Many researchers have presented studies on OCT based retinal image analysis over the past. However, to our best knowledge, there is no framework yet available which can extract retinal lesions from multi-vendor OCT scans and utilize them for the intuitive grading of the human retina. To cater this lack, we propose a deep retinal analysis and grading framework (RAG-FW). RAG-FW is a hybrid convolutional framework which extracts retinal lesions such as intra-retinal fluid, sub-retinal fluid, hard exudates, drusen and chorioretinal abnormalities (including fibrotic scars and choroidal neovascular membranes) from multi-vendor OCT scans. Furthermore, it utilizes them for the lesion-influenced grading of retinopathy as per the clinical standards. RAG-FW has been trained using 113,261 retinal OCT scans from which 112,261 scans were used for training and 1,000 scans were used for the validation purposes. Furthermore, it has been rigorously tested on 43,613 scans from five highly complex publicly available datasets where it achieved the mean intersection-over-union score of 0.8055 for extracting the retinal lesions and the F1 score of 99.52% for correctly classifying the retinopathy cases. The source code of RAG-FW is available at http://biomisa.org/index.php/downloads/.
- Published
- 2021
21. Cross-mixing study of a poisonous Cestrum species, Cestrum diurnum in herbal raw material by chemical fingerprinting using LC-ESI-QTOF-MS/MS
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Muhammad Noman Khan, Hamna Shadab, Hamad Ali, Faraz Ul Haq, Syed Ghulam Musharraf, and Hesham R. El-Seedi
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Nornicotine ,Esi qtof ms ,Cytotoxicity ,General Chemical Engineering ,02 engineering and technology ,Cestrum diurnum ,Raw material ,010402 general chemistry ,01 natural sciences ,lcsh:Chemistry ,chemistry.chemical_compound ,Quantification ,Medicinal plants ,biology ,Traditional medicine ,Cestrum ,Biochemistry and Molecular Biology ,General Chemistry ,LC-ESI-MS/MS ,021001 nanoscience & nanotechnology ,biology.organism_classification ,0104 chemical sciences ,Adulteration ,lcsh:QD1-999 ,chemistry ,Phytotoxicity ,Chemical fingerprinting ,0210 nano-technology ,Biokemi och molekylärbiologi - Abstract
Poisonous plants are widely distributed and may have risk of phytotoxicity upon mixing with medicinal plants. Several species of Cestrum genus are poisonous and linked with many serious health issues. In the present study, cross-mixing of a toxic plant, Cestrum diurnum with morphologically resembling medicinal plant, Adhatoda vasica was studied using chemical fingerprinting approach. LC-ESI-MS/MS tool was used to develop the chemical fingerprints of three toxic species of Cestrum, including, C. diurnum, C. nocturnum and C. parqui. Total forty-three compounds were identified using high-resolution LC-ESI-MS/MS data comparison. Chemometric analyses were done to compare the distribution of identified compounds present in these Cestrum species. One of the identified compounds, nornicotine (a toxic compound) was also quantified using LC-IT-MS/MS. Adulteration study was conducted by mixing toxic C. diurnum in A. vasica with various ratios (w/w) and five differentiable compounds were identified to detect the adulteration. The method was able to detect up to the limit of 5% mixing of toxic C. diurnum. Moreover, cytotoxicity of the methanolic extracts of these three species were also studied on normal human PBMC (peripheral blood mononuclear cells) and all found to be toxic, while the C. nocturnum showed the highest level of toxicity with the IC50 12.5 μg/mL.
- Published
- 2020
22. A Novel Approach towards the Potential Effects of Chlorpyrifos on Testicular Biochemistry and Physiology of Male Sprague Dawely Rats
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Muhammad Noman, Muhammad Farrukh Tahir, Shehbaz Ali, and Moiffa Goher
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chemistry.chemical_compound ,chemistry ,Chlorpyrifos ,Physiology ,Biology - Published
- 2020
23. Levobupivacaine inhibits proliferation and promotes apoptosis of breast cancer cells by suppressing the PI3K/Akt/mTOR signalling pathway
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Qiu Yan, Qingping Wen, Aglais Arredondo Falagán, Jiaxin Lv, Seidu A. Richard, Akosua Kotaa Kwakye, Sylvanus Kampo, Evans Atito-Narh, Muhammad Noman Ramzan, and Jerry Agudogo
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0301 basic medicine ,Proliferation ,lcsh:Medicine ,Breast Neoplasms ,Apoptosis ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Phosphatidylinositol 3-Kinases ,0302 clinical medicine ,Breast cancer ,Western blot ,Invasion ,Annexin ,Cell Line, Tumor ,medicine ,Humans ,030212 general & internal medicine ,Viability assay ,lcsh:Science (General) ,Protein kinase B ,lcsh:QH301-705.5 ,PI3K/AKT/mTOR pathway ,Cell Proliferation ,Levobupivacaine ,medicine.diagnostic_test ,Chemistry ,TOR Serine-Threonine Kinases ,lcsh:R ,General Medicine ,medicine.disease ,Research Note ,030104 developmental biology ,Real-time polymerase chain reaction ,lcsh:Biology (General) ,Cancer research ,Proto-Oncogene Proteins c-akt ,lcsh:Q1-390 - Abstract
Objective This study aimed to test the hypothesis that levobupivacaine has anti-tumour effects on breast cancer cells. Results Colony formation and transwell assay were used to determine breast cancer cells proliferation. Flow Cytometry (annexin V and PI staining) was used to investigate breast cancer cells apoptosis. The effects of levobupivacaine on cellular signalling and molecular response were studied with Quantitative Polymerase Chain Reaction and western blot. Induction of apoptosis was confirmed by cell viability, morphological changes showed cell shrinkage, rounding, and detachments from plates. The results of the western blot and Quantitative Polymerase Chain Reaction indicated activation of active caspase-3 and inhibition of FOXO1. The results of the flow Cytometry confirmed that levobupivacaine inhibited breast cancer cell proliferation and enhanced apoptosis of breast cancer cells. Quantitative Polymerase Chain Reaction and Western blot analysis showed increased p21 and decreased cyclin D. Quantitative Polymerase Chain Reaction and western blot analysis showed that levobupivacaine significantly increased Bax expression, accompanied by a significant decreased Bcl-2 expression and inhibition of PI3K/Akt/mTOR signalling pathway. These findings suggested that levobupivacaine inhibits proliferation and promotes breast cancer cells apoptosis in vitro.
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- 2020
24. Bioprospecting a native silver-resistant Bacillus safensis strain for green synthesis and subsequent antibacterial and anticancer activities of silver nanoparticles
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Muhammad Bilal Khan Niazi, Muhammad Noman, Muhammad Zubair, Bin Li, Mohsin Khurshid, Temoor Ahmed, Farheen Tariq, Ahmad Almatroudi, Rabia Mumtaz, and Muhammad Shahid
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0301 basic medicine ,Bacillus safensis ,HepG2 ,HEK293 ,Antimicrobial activity ,medicine.disease_cause ,Silver nanoparticle ,Article ,Anticancer activity ,Nanomaterials ,03 medical and health sciences ,0302 clinical medicine ,medicine ,MTT assay ,Fourier transform infrared spectroscopy ,lcsh:Science (General) ,Escherichia coli ,ComputingMethodologies_COMPUTERGRAPHICS ,lcsh:R5-920 ,Multidisciplinary ,biology ,Chemistry ,B. safensis ,biology.organism_classification ,AgNPs ,030104 developmental biology ,Cell culture ,030220 oncology & carcinogenesis ,Antibacterial activity ,lcsh:Medicine (General) ,Nuclear chemistry ,lcsh:Q1-390 - Abstract
Graphical abstract, Highlights • Taxonomic identification of a native silver-resistant bacterial strain. • Synthesis of silver nanoparticles (AgNPs) by the green method. • Characterization of purified AgNPs by spectroscopic and imaging techniques. • Measurement of antibacterial activity of AgNPs against human pathogens. • Estimation of anticancer potential of AgNPs against liver cancer cell line., Green nanomaterials have gained much attention due to their potential use as therapeutic agents. The present study investigated the production of silver nanoparticles (AgNPs) from a silver-resistant Bacillus safensis TEN12 strain, which was isolated from metal contaminated soil and taxonomically identified through 16S rRNA gene sequencing. The formation of AgNPs in bacterial culture was confirmed by using UV–vis spectroscopy with an absorption peak at 426.18 nm. Fourier transform infrared (FTIR) spectroscopy confirmed the involvement of capping proteins and alcohols for stabilization of AgNPs. Moreover, X-ray diffraction analysis (XRD), scanning and transmission electron microscopy (SEM and TEM) confirmed the crystalline nature and spherical shape of AgNPs with particle size ranging from 22.77 to 45.98 nm. The energy dispersive X-ray spectroscopy (EDX) revealed that 93.54% silver content is present in the nano-powder. AgNPs showed maximum antibacterial activity (20.35 mm and 19.69 mm inhibition zones) at 20 µg mL−1 concentration against Staphylococcus aureus and Escherichia coli, respectively and significantly reduced the pathogen density in broth culture. Furthermore, AgNPs demonstrated significant anticancer effects in the human liver cancer cell line (HepG2) in MTT assay, whereas, no cytotoxic effects were demonstrated by AgNPs on normal cell line (HEK293). The present study suggests that the biogenic AgNPs may substitute chemically synthesized drugs with wider applications as antibacterial and anticancer agents.
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- 2020
25. EXPLORING THE POTENTIAL STAT3 GENE IN BROILER WITH ASCITES SYNDROME BY BIOINFORMATICS ANALYSIS
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Ning Wang, Shengbo Cao, Jawad Munawar, M. Kashif Saleemi, Shengfeng Wan, Muhammad Noman Naseem, and Zheng Chen
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chemistry.chemical_compound ,One Health ,chemistry ,Environmental health ,General Medicine ,Business ,Mycotoxin - Abstract
STAT3 plays an important role in vascular remodeling, but there are no studies on its protein function and structure. In this study, the physical and chemical properties, hydrophilicity / hydrophobicity, transmembrane domain, phosphorylation site, glycosylation site, subcellular localization, signal peptide distribution and secondary and tertiary structure of STAT3 protein were predicted online by bioinformatics tools. The results showed that the number of amino acids of STAT3 was 771aa, the theoretical isoelectric point was 5.94, the instability index was 49.21, and the average coefficient of hydrophilicity was-0.389. It was found to be a hydrophilic protein with no transmembrane domain, 45 phosphorylation sites and 4 glycosylation sites. The protein is expressed in the nucleus, there is no signal peptide distribution in the whole sequence, and the protein structure is complex. The secondary structure is mainly composed of ?-helix, Extended strand, ?-turn and Random coil, accounting for 50.58%, 11.80%, 2.46% and 35.15%, respectively. The tertiary structure is mainly composed of ?-helix and Random coil. In summary, this study suggests that the amino acid sequence 75-190aa of STAT3 can be used to express antigens and prepare antibodies, and the sequence 737-754aa of STAT3 can be used to prepare peptide antigens This study provides a basis for further exploring the function of STAT3 protein, and lays a foundation for expression and purification of STAT3 protein, preparation of STAT3 antibody and screening of drug targets. This then provides powerful conditions for pathological detection of pulmonary vascular remodeling and gene drug therapy of ascites syndrome in broilers.
- Published
- 2020
26. Banana Peels: A Promising Substrate for the Coproduction of Pectinase and Xylanase from Aspergillus fumigatus MS16
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Muhammad Noman Syed, Muhammad Sohail, and Mahwish Zehra
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0106 biological sciences ,0301 basic medicine ,Microbiology (medical) ,food.ingredient ,lcsh:QH426-470 ,Pectin ,030106 microbiology ,Solid-State Fermentation ,lcsh:QR1-502 ,01 natural sciences ,Applied Microbiology and Biotechnology ,Microbiology ,lcsh:Microbiology ,banana peels ,Aspergillus fumigatus ,03 medical and health sciences ,food ,010608 biotechnology ,Food science ,Pectinase ,chemistry.chemical_classification ,xylanase ,Aspergillus ,biology ,Chemistry ,Substrate (chemistry) ,General Medicine ,biology.organism_classification ,pectinase ,lcsh:Genetics ,Enzyme ,Xylanase ,Fermentation - Abstract
Banana peels (BP), an under-utilized waste material, was studied for the production of xylanase and pectinase by Aspergillus fumigates MS16. The factors affecting the co-production of both the enzymes were separately studied for their influence under submerged (Smf) and solid-state fermentation (SSF) of BP. The strain was cultivated in the presence of mineral salt (MS) solution containing BP powder as a sole source of carbon and physical and nutritional factors varied to observe the change in the enzyme titers. The data revealed that the MS-based medium was appropriate for the production of both the enzymes; therefore, in subsequent experiments, the same medium was used. A temperature of 30-35°C was found better for the production of the two enzymes under Smf; however, the titers of pectinase dropped significantly at 40°C. Contrarily, xylanase production was inhibited at 40°C under SSF but not under Smf. Whereas, supplementation of xylan or pectin to BP induced the production of xylanase and pectinase, respectively. Lowering the pH value favored the production of both the enzymes under Smf; however, the production of pectinase improved significantly when a higher concentration of BP (1%) was used compared to the concentration (0.25%) required for the production of xylanase. Interestingly, the enzyme preparation obtained under SSF exhibited optimal activities of both the enzymes at higher temperatures when compared to those obtained under Smf. The data indicated that the physiology of the fungus differed greatly when the cultivation pattern varied from Smf to SSF and, hence, the enzymes produced were characteristically distinct. Banana peels (BP), an under-utilized waste material, was studied for the production of xylanase and pectinase by Aspergillus fumigates MS16. The factors affecting the co-production of both the enzymes were separately studied for their influence under submerged (Smf) and solid-state fermentation (SSF) of BP. The strain was cultivated in the presence of mineral salt (MS) solution containing BP powder as a sole source of carbon and physical and nutritional factors varied to observe the change in the enzyme titers. The data revealed that the MS-based medium was appropriate for the production of both the enzymes; therefore, in subsequent experiments, the same medium was used. A temperature of 30–35°C was found better for the production of the two enzymes under Smf; however, the titers of pectinase dropped significantly at 40°C. Contrarily, xylanase production was inhibited at 40°C under SSF but not under Smf. Whereas, supplementation of xylan or pectin to BP induced the production of xylanase and pectinase, respectively. Lowering the pH value favored the production of both the enzymes under Smf; however, the production of pectinase improved significantly when a higher concentration of BP (1%) was used compared to the concentration (0.25%) required for the production of xylanase. Interestingly, the enzyme preparation obtained under SSF exhibited optimal activities of both the enzymes at higher temperatures when compared to those obtained under Smf. The data indicated that the physiology of the fungus differed greatly when the cultivation pattern varied from Smf to SSF and, hence, the enzymes produced were characteristically distinct.
- Published
- 2020
27. Optical optimization of double-side-textured monolithic perovskite–silicon tandem solar cells for improved light management
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Muhammad Noman, Adnan Daud Khan, Najeeb Ullah, Aimal Daud Khan, Fazal E. Subhan, and Muhammad Imran
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Materials science ,Fabrication ,Tandem ,Silicon ,business.industry ,Open-circuit voltage ,General Chemical Engineering ,Photovoltaic system ,Energy conversion efficiency ,chemistry.chemical_element ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,chemistry ,Optoelectronics ,0210 nano-technology ,business ,Short circuit ,Perovskite (structure) - Abstract
Tandem configuration-containing perovskite and silicon solar cells are promising candidates for realizing a high power conversion efficiency of 30% at reasonable costs. Silicon solar cells with planar front surfaces used in tandem devices cause high optical losses, which significantly affects their efficiency. Moreover, some studies have explored the fabrication of perovskites on textured silicon cells. However, due to improper texturing, light trapping is not ideal in these devices, which reduces the efficiency. In this work, we optimized the pyramid height of textured silicon cells and efficiently characterized them to achieve enhanced light trapping. Two different kinds of perovskites, namely, Cs0.17FA0.6Pb(Br0.17I0.7)3 and Cs0.25FA0.6Pb(Br0.20I0.7)3 with wide bandgaps were conformally deposited on textured silicon cells, and the performance of these flat and fully textured tandem devices was numerically analyzed. The thickness of each layer in the tandem cell was optimized in a way to ensure a perfect current match between the top perovskite and bottom silicon subcells. The results indicated that the textured tandem configuration enhances light absorption over a broad spectral range due to the optimized pyramid height compared to flat surfaces. Eventually, the photovoltaic parameters of the proposed tandem cell were compared with the already existing structures, and our design supports large values of open circuit voltage (Voc) = 1.78 V, short circuit current density (Jsc) = 20.09 mA cm−2, fill factor (FF) = 79.01%, and efficiency (η) = 28.20% compared to other kinds of tandem solar cells.
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- 2020
28. Phytoremediation of contaminated soil Lead and Cadmium by Brassica júncea (L.) Czern plant
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Zhemin Shen, Sift Desk, Kokab Saba Ali, Kashif Ali Panhwar, Hamidova Emiliya, Sajid Ullah, Faisal Khan, Javed Ahmad, Zakir Ullah, Izhar Ul Haq, Rabia Tasleem, Qunshan Wei, Muhammad Noman, Muhammad Subhanullah, and Bilal
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Phytoremediation ,Cadmium ,Lead (geology) ,Agronomy ,chemistry ,biology ,Brassica ,chemistry.chemical_element ,Environmental science ,biology.organism_classification ,Soil contamination - Abstract
Many remediating strategies are used for polluted soils, however, but mostly the essential phytoremediation is a less expensive, organically satisfying technique that is generally reasonable for various countries. Pot tests were managed to dissect the Brassica júncea plant biomass cultivated on Pb as well as Cd polluted soils as well to survey its ampleness for the evacuation of Pb and Cd. Samples of picked plants developed at a blend of alluvial soil and sand were moved with vessel of pots the earth finishing extents as well allowed make with time regenerative development. Through acid digestion, Pb and Cd extraction was settled from the plant. Consequently, they were collected and afterwards examined for chosen metals through utilizing Atomic Absorption Spectrometry (AAS). Generally, the current examination results demonstrated that no hyperaccumulators of Pb as well Cd were recognized in the region. Body parts of the plant were categorized as Pb low accumulators, moderate accumulators and excluder, as well as Cd low accumulator, excluder. Additionally, Cd concentration was high up than the allowable range in species of plant. In plants, allowable range of Pb and Cd is 0.2 - 20 and 0.1 -2.4 mg kg – 1. In Brassica júncea plant the Pb as well Cd both were no hyperaccumulators. Hence, this local plant had the suitable ability to use for phytoremediation of contaminated soils around the Hayatabad Industrial area, Peshawar. All experimental Results demonstrated that from the medium of soil by Brassica júncea (L.) Czern plant the maximum lead and cadmium removals were 94 % and 94.26 %, respectively in the open environment, while in the control environment this removal was 82 % for Pb and 93.16 % for Cd .The present research work observes that brassica júncea (L.) Czern plant was more helpful for Cd take-up contrasted with Pb, and thus it is capacity we suggest Pb as well Cd for remediation from polluted soils. Keywords: Lead, Cadmium, Contaminated soil, Removal
- Published
- 2020
29. Achromobacter sp. FB-14 harboring ACC deaminase activity augmented rice growth by upregulating the expression of stress-responsive CIPK genes under salinity stress
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Tahir Naqqash, Awais Maqsood, Farwa Basit, Muhammad Noman, Asad Ali Shah, Irfan Manzoor, Muhammad Zubair, Temoor Ahmed, and Muhammad Shahid
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Achromobacter ,Protein Serine-Threonine Kinases ,Biology ,Salt Stress ,Microbiology ,Soil ,03 medical and health sciences ,chemistry.chemical_compound ,Gene Expression Regulation, Plant ,RNA, Ribosomal, 16S ,Gene expression ,Media Technology ,Carbon-Carbon Lyases ,Environmental Microbiology - Research Paper ,Soil Microbiology ,030304 developmental biology ,0303 health sciences ,Rhizosphere ,Strain (chemistry) ,030306 microbiology ,food and beverages ,Oryza ,biology.organism_classification ,Enzyme assay ,Up-Regulation ,Salinity ,chemistry ,Shoot ,biology.protein ,Nutrient agar - Abstract
Soil salinity is one of the major plant growth and yield-limiting constraints in arid and semi-arid regions of the world. In addition to the oxidative damage, increasing salt stress is associated with elevated cellular ethylene levels due to the synthesis of 1-aminocyclopropane-1-carboxylic acid (ACC) in large amounts. The objective of the current study was to elucidate the inoculation effect of an ACC deaminase (ACCD)–producing phytobeneficial strain Achromobacter sp. FB-14 on rice plants to alleviate the salinity effects by upregulation of the stress-responsive CIPK genes. The strain FB-14 was isolated by using nutrient agar medium at 855 mM NaCl concentration and it was taxonomically identified as Achromobacter sp. with more than 99% 16S rRNA gene sequence similarity with many Achromobacter species. The strain FB-14 demonstrated substantial in vitro potential for ACCD activity, synthesis of indole compounds, and phosphate solubilization up to 100 mM NaCl concentration in the culture medium. The gene corresponding to ACCD activity (acdS) was amplified and sequenced in order to confirm the inherent enzyme activity of the strain at a molecular level. The rifampicin-resistant derivative of strain FB-14 was recovered from the rice rhizosphere on antibiotic medium up to 21 days of sowing. Moreover, the strain FB-14 was inoculated on rice plants under salinity and it not only enhanced the growth of rice plants in terms of root and shoot length, and fresh and dry weight, but also upregulated the expression of stress-responsive CIPK genes (OsCIPK03, OsCIPK12, and OsCIPK15) according to the results of qRT-PCR analysis. To the best of our knowledge, this is the first report deciphering the role of plant-beneficial Achromobacter strain relieving the rice plants from salt stress by promoting the growth and enhancing the expression of stress-responsive CIPK genes. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1007/s42770-019-00199-8) contains supplementary material, which is available to authorized users.
- Published
- 2019
30. Dynamic pH and Thermal Analysis of Paper-Based Microchip Electrophoresis
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Muhammad Noman Hasan, Asya Akkus, Adrienne R. Minerick, Chirag R. Kharangate, Derya Akkaynak, Umut A. Gurkan, and Ran An
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chemistry.chemical_classification ,paper-based electrophoresis ,Materials science ,Hemoglobin electrophoresis ,Chromatography ,Mechanical Engineering ,Biomolecule ,Microfluidics ,temperature shifts ,Cellulose acetate ,Article ,Electrophoresis ,chemistry.chemical_compound ,Temperature gradient ,chemistry ,Control and Systems Engineering ,pH indicator ,TJ1-1570 ,pH shifts ,hemoglobin separation ,Mechanical engineering and machinery ,Electrical and Electronic Engineering ,Thermal analysis - Abstract
Paper-based microchip electrophoresis has the potential to bring laboratory electrophoresis tests to the point of need. However, high electric potential and current values induce pH and temperature shifts, which may affect biomolecule electrophoretic mobility thus decrease test reproducibility and accuracy of paper-based microfluidic electrophoresis. We have previously developed a microchip electrophoresis system, HemeChip, which has the capability of providing low-cost, rapid, reproducible, and accurate point-of-care (POC) electrophoresis tests for hemoglobin analysis. Here, we report the methodologies we implemented for characterizing HemeChip system pH and temperature during the development process, including utilizing commercially available universal pH indicator and digital camera pH shift characterization, and infrared camera characterizing temperature shift characterization. The characterization results demonstrated that pH shifts up to 1.1 units, a pH gradient up to 0.11 units/mm, temperature shifts up to 40 °C, and a temperature gradient up to 0.5 °C/mm existed in the system. Finally, we report an acid pre-treatment of the separation media, a cellulose acetate paper, mitigated both pH and temperature shifts and provided a stable environment for reproducible HemeChip hemoglobin electrophoresis separation.
- Published
- 2021
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31. A UPLC-DAD-Based Bio-Screening Assay for the Evaluation of the Angiotensin Converting Enzyme Inhibitory Potential of Plant Extracts and Compounds: Pyrroquinazoline Alkaloids from Adhatoda vasica as a Case Study
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Jalal Uddin, Syed Ghulam Musharraf, Syeda Tehreem, Muhammad Salman Bhatti, Muhammad Noman Khan, Reaz Uddin, Saba Tauseef, Hesham R. El-Seedi, Abdullatif Bin Muhsinah, and Saeedur Rahman
- Subjects
hypertension ,Pharmaceutical Science ,vasicine ,High-performance liquid chromatography ,Vasicine ,Analytical Chemistry ,chemistry.chemical_compound ,QD241-441 ,Chromatography detector ,vasicinol ,Drug Discovery ,medicine ,pyrroquinazoline alkaloids ,Physical and Theoretical Chemistry ,Medicinal plants ,angiotensin converting enzyme ,Chromatography ,biology ,Organic Chemistry ,Biochemistry and Molecular Biology ,Hippuric acid ,Angiotensin-converting enzyme ,Captopril ,vasicinone ,chemistry ,Chemistry (miscellaneous) ,biology.protein ,Molecular Medicine ,Vasicinone ,Biokemi och molekylärbiologi ,medicine.drug - Abstract
Angiotensin converting enzyme (ACE) plays a crucial role in regulating blood pressure in the human body. Identification of potential ACE inhibitors from medicinal plants supported the idea of repurposing these medicinal plants against hypertension. A method based on ultra-performance liquid chromatography (UPLC) coupled with a diode array detector (DAD) was used for the rapid screening of plant extracts and purified compounds to determine their ACE inhibitory activity. Hippuryl-histidiyl-leucine (HHL) was used as a substrate, which is converted into hippuric acid (HA) by the action of ACE. A calibration curve of the substrate HHL was developed with the linear regression 0.999. The limits of detection and quantification of this method were found to be 0.134 and 0.4061 mM, respectively. Different parameters of ACE inhibitory assay were optimized, including concentration, incubation time and temperature. The ACE inhibition potential of Adhatoda vasica (methanolic-aqueous extract) and its isolated pyrroquinazoline alkaloids, vasicinol (1), vasicine (2) and vasicinone (3) was evaluated. Compounds 1–3 were characterized by various spectroscopic techniques. The IC50 values of vasicinol (1), vasicine (2) and vasicinone (3) were found to be 6.45, 2.60 and 13.49 mM, respectively. Molecular docking studies of compounds 1–3 were also performed. Among these compounds, vasicinol (1) binds as effectively as captopril, a standard drug of ACE inhibition.
- Published
- 2021
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32. Wild Halophytic Phragmites karka Biomass Saccharification by Bacterial Enzyme Cocktail
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Immad Ansari, Uroosa Ejaz, Zainul Abideen, Salman Gulzar, Muhammad Noman Syed, Jing Liu, Wang Li, Pengcheng Fu, and Muhammad Sohail
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Microbiology (medical) ,Phragmites karka ,biology ,Desmostachya bipinnata ,biomass ,Chemistry ,Biomass ,Cellulase ,biology.organism_classification ,Microbiology ,QR1-502 ,Bacillus vallismortis ,saccharification ,Bioenergy ,Biofuel ,enzyme cocktail ,Xylanase ,biology.protein ,Food science ,Pectinase ,central composite design ,Original Research - Abstract
Biofuel derived from halophytic biomass is getting attention owing to the concerns of energy versus food crisis. The disadvantages associated with edible bioenergy resources necessitate the need to explore new feedstocks for sustainable biofuel production. In this study, biomass from locally available abundant halophytes (Panicum antidotale, Phragmites karka, Halopyrum mucronatum, and Desmostachya bipinnata) was screened for saccharification by an enzyme cocktail composed of cellulase, xylanase, and pectinase from Brevibacillus borstelensis UE10 and UE27, Bacillus aestuarii UE25, Aneurinibacillus thermoaerophilus UE1, and Bacillus vallismortis MH 1. Two types of pretreatment, i.e., with dilute acid and freeze-thaw, were independently applied to the halophytic biomass. Saccharification of acid-pretreated P. karka biomass yielded maximum reducing sugars (9 mg g–1) as compared to other plants. Thus, the factors (temperature, pH, substrate concentration, and enzyme units) affecting its saccharification were optimized using central composite design. This statistical model predicted 49.8 mg g–1 of reducing sugars that was comparable to the experimental value (40 mg g–1). Scanning electron microscopy and Fourier-transform infrared spectroscopy showed significant structural changes after pretreatment and saccharification. Therefore, halophytes growing in saline, arid, and semi-arid regions can be promising alternative sources for bioenergy production., Graphical Abstract Saccharification of phragmites karka.
- Published
- 2021
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33. Rapid Identification of Common Secondary Metabolites of Medicinal Herbs Using High-Performance Liquid Chromatography with Evaporative Light Scattering Detector in Extracts
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Hesham R. El-Seedi, Shaden A. M. Khalifa, Adnan Ali, Muhammad Ali, Kiran Amir Ali, Muhammad Noman Khan, Shaheen Faizi, Syed Ghulam Musharraf, and Saeedur Rahman
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plant extracts ,HPLC-ELSD ,Endocrinology, Diabetes and Metabolism ,dereplication ,flavonoids ,triterpenes ,sterols ,Microbiology ,01 natural sciences ,Biochemistry ,High-performance liquid chromatography ,Article ,chemistry.chemical_compound ,Rutin ,Ursolic acid ,Chromatography detector ,Betulinic acid ,Molecular Biology ,Oleanolic acid ,Betulin ,Chromatography ,010405 organic chemistry ,010401 analytical chemistry ,QR1-502 ,0104 chemical sciences ,chemistry ,Kaempferol - Abstract
The discovery and identification of novel natural products of medicinal importance in the herbal medicine industry becomes a challenge. The complexity of this process can be reduced by dereplication strategies. The current study includes a method based on high-performance liquid chromatography (HPLC), using the evaporative light scattering detector (ELSD) to identify the 12 most common secondary metabolites in plant extracts. Twelve compounds including rutin, taxifolin, quercetin, apigenin, kaempferol, betulinic acid, oleanolic acid, betulin, lupeol, stigmasterol, and β-sitosterol were analyzed simultaneously. The polarity of the compounds varied greatly from highly polar (flavonoids) to non-polar (triterpenes and sterols). This method was also tested for HPLC-DAD and HPLC-ESI-MS/MS analysis. Oleanolic acid and ursolic acid could not be separated in HPLC-ELSD analysis but were differentiated using LC-ESI-MS/MS analysis due to different fragment ions. The regression values (R2 > 0.996) showed good linearity in the range of 50–1000 µg/mL for all compounds. The range of LOD and LOQ values were 7.76–38.30 µg/mL and 23.52–116.06 µg/mL, respectively. %RSD and % trueness values of inter and intraday studies were mostly
- Published
- 2021
34. Effect of Molybdenum Disulfide on the Performance of Polyaniline Based Counter Electrode for Dye-Sensitized Solar Cell Applications
- Author
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Muhammad Noman, Anas Bin Aqeel, Usman Ghafoor, Muhammad Shakeel Ahmad, Taiba Zahid, and Uzair Khaleeq uz Zaman
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Auxiliary electrode ,Technology ,Control and Optimization ,Materials science ,Scanning electron microscope ,020209 energy ,Energy Engineering and Power Technology ,02 engineering and technology ,counter electrode ,polyaniline ,chemistry.chemical_compound ,Polyaniline ,dye-sensitized solar cell ,0202 electrical engineering, electronic engineering, information engineering ,molybdenum disulfide ,Electrical and Electronic Engineering ,Engineering (miscellaneous) ,Molybdenum disulfide ,Nanocomposite ,Renewable Energy, Sustainability and the Environment ,021001 nanoscience & nanotechnology ,Dielectric spectroscopy ,Dye-sensitized solar cell ,Chemical engineering ,chemistry ,Cyclic voltammetry ,0210 nano-technology ,Energy (miscellaneous) ,catalyst - Abstract
Dye-sensitized solar cells are gaining interest in the aerospace industry, extending their applications from solar-powered drones to origami-style space-based solar power stations due to their flexibility, light weightiness, and transparency. The major issue with its widespread commercial use is the employment of expensive Pt-based counter electrodes. In this study, an attempt has been made to replace the Pt with Polyaniline (PANI)/Molybdenum sulfide (MoS2) nanocomposite. The nanocomposites i.e., PANI-0.5wt% MoS2, PANI-2wt%MoS2, PANI-5wt%MoS2, and PANI-7wt%MoS2and PANI-9wt%MoS2, have been synthesized and compared with standard Pt-based CE. Scanning electron microscopy, transmission electron microscopy, and X-ray diffraction methods have been utilized to study both surface morphology and structural composition. Fourier transform infrared has also been used to identify redox-active functionalities. Electron impedance spectroscopy and cyclic voltammetry have been employed to study electron transfer and catalytic activity. Finally, I-V testing has been conducted using a sun simulator. A maximum efficiency of 8.12% has been observed with 7wt% MoS2 in the PANI matrix at 6 µm thickness, which is 2.65% higher compared to standard Pt-based CE (7.91%). This is due to high electronic conduction with the addition of MoS2, improved catalytic activity, and the high surface area of the PANI nano-rods.
- Published
- 2021
35. Production of biodiesel by enzymatic transesterification of non-edible Salvadora persica (Pilu) oil and crude coconut oil in a solvent-free system
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Ayesha Maqbool, Azeem Abdul Aziz Budhwani, Tanveer Hussain, and Muhammad Noman Syed
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food.ingredient ,020209 energy ,lcsh:Biotechnology ,Biomedical Engineering ,Biomass ,02 engineering and technology ,Thin layer chromatography ,lcsh:Chemical technology ,complex mixtures ,lcsh:Technology ,food ,020401 chemical engineering ,Salvadora persica ,lcsh:TP248.13-248.65 ,0202 electrical engineering, electronic engineering, information engineering ,lcsh:TP1-1185 ,Food science ,0204 chemical engineering ,Lipase ,Biodiesel ,Gas chromatography ,biology ,Renewable Energy, Sustainability and the Environment ,Chemistry ,lcsh:T ,Salvadora persica seed oil ,Coconut oil ,food and beverages ,Transesterification ,biology.organism_classification ,Biofuel ,Biodiesel production ,Crude coconut oil ,biology.protein ,Food Science ,Biotechnology - Abstract
Background It is becoming imperative to develop renewable fuels such as biodiesel which are sustainable and environmentally friendly. Exploiting non-edible oils is more necessary to reduce dependency of edible oils for biodiesel production. The current study investigated biodiesel production from non-edible Salvadora persica seed oil (SPSO) and crude coconut oil (CCO) by Burkholderia cepacia lipase acting as a biocatalyst in a solvent-free system. The biodiesel yield produced from these feedstocks was compared and the effect of ethanol (acyl acceptor) vs. SPSO and CCO in various ratios on biodiesel production was determined. Results The presence of medium-chain fatty acids in majority was confirmed for SPSO and CCO while the average molecular weight was calculated as 749.53 g/mol and 664.57 g/mol, respectively. Thin Layer Chromatography indicated ethyl esters in the produced Salvadora and coconut biodiesel samples. Maximum biodiesel yield (around 70%) was obtained at 1:4 oil-to-ethanol molar ratio from both oils followed by a decline at higher ratios. The gas chromatographic analysis of Salvadora biodiesel at 1:4 molar ratio showed that the yield of individual esters was mostly of medium- and long-chain fatty acids. The analysis of coconut biodiesel at 1:4 molar ratio revealed that it consists mainly of the esters of medium-chain fatty acids. A comparison of estimated properties of biodiesel from both the parent oils with the international standard showed that it meets most of the requirements. Conclusion The study paves the way for a green route for biodiesel production and would promote the use of non-edible vegetable oils over edible ones to produce biodiesel. Further, it is a right step to use lipases in biodiesel production as compared to chemical catalysts. Ethanol, which can also be produced from biomass fermentation, can be used as acyl acceptor to produce biodiesel and this makes the process eco-friendly. Moreover, Burkholderia cepacia lipase is a good choice among lipases to get high biodiesel yields successfully from SPSO and CCO at low oil-to-ethanol molar ratios.
- Published
- 2019
36. Energy Economised Strategy for Synthesis of Silica and Graphene Oxide Modified Porous Barium Magnesium Niobate Ceramic with Enhanced Dielectric Properties
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Muhammad Noman, Noor Muhammad, Ghulam Yasin, Muhammad Furqan Ali, Muhammad Uzair Malik, Waheed Qamar Khan, Muhammad Yousaf, Tahira Mehtab, Saim Qamar Lodhi, Shahedur Rahman Mir, and Muhammad Junaid Anjum
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Materials science ,Graphene ,Oxide ,chemistry.chemical_element ,Magnesium niobate ,Barium ,Dielectric ,law.invention ,chemistry.chemical_compound ,chemistry ,Chemical engineering ,law ,visual_art ,visual_art.visual_art_medium ,General Materials Science ,Ceramic ,Porosity ,Energy (signal processing) - Published
- 2019
37. Efficient Light Management in Ultrathin Crystalline GaAs Solar Cell Based on Plasmonic Square Nanoring Arrays
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Fazal E. Subhan, Adnan Daud Khan, Aimal Daud Khan, and Muhammad Noman
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Photocurrent ,Materials science ,business.industry ,Biophysics ,02 engineering and technology ,021001 nanoscience & nanotechnology ,01 natural sciences ,Biochemistry ,Active layer ,law.invention ,Gallium arsenide ,010309 optics ,chemistry.chemical_compound ,chemistry ,law ,0103 physical sciences ,Solar cell ,Optoelectronics ,0210 nano-technology ,Absorption (electromagnetic radiation) ,business ,Current density ,Nanoring ,Plasmon ,Biotechnology - Abstract
Improving the photon absorption in ultrathin-film solar cells with active layer thickness of a few micrometers is important for enhancing efficiency and reducing cost. We present a computational study of novel design consisting of ultrathin absorber layer made of gallium arsenide (GaAs) integrated with plasmonic square nanoring particles. The energy absorbed by GaAs layer is significantly enhanced with the help of plasmonic nanorings, resulting in substantial absorption enhancement of approximately 34% compared with bare active layer. For qualitative analysis, the short-circuit current density of thin-film cell is evaluated for AM 1.5 G solar illumination and is found to be 1.4 times higher compared with unpatterned solar cell structure. Furthermore, the structure is optimized by varying different parameters and materials of functional layers, yielding a photocurrent density of 30.185 mA/cm2, which is close to the Yablonovitch limit.
- Published
- 2019
38. A green route for biodiesel production from waste cooking oil over base heterogeneous catalyst
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Muhammad Farooq, Abdul Naeem, Liaqat Ali Shah, Fouzia Perveen, Anita Ramli, Noor Saeed Khattak, and Muhammad Noman
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chemistry.chemical_classification ,Fuel Technology ,Nuclear Energy and Engineering ,Cooking oil ,Waste management ,Base (chemistry) ,chemistry ,Renewable Energy, Sustainability and the Environment ,Biodiesel production ,Energy Engineering and Power Technology ,Environmental science ,Leaching (metallurgy) ,Heterogeneous catalysis - Published
- 2019
39. Green magnesium oxide nanoparticles-based modulation of cellular oxidative repair mechanisms to reduce arsenic uptake and translocation in rice (Oryza sativa L.) plants
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Muhammad Noman, Shafaqat Ali, Natasha Manzoor, Awais Maqsood, Khalid Mahmud Hussaini, Temoor Ahmed, Muhammad Rizwan, Bin Li, and Muhammad Shahid
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Antioxidant ,Health, Toxicology and Mutagenesis ,medicine.medical_treatment ,chemistry.chemical_element ,Biomass ,Metal Nanoparticles ,Toxicology ,Arsenic ,chemistry.chemical_compound ,Biosynthesis ,X-Ray Diffraction ,RNA, Ribosomal, 16S ,Spectroscopy, Fourier Transform Infrared ,medicine ,Humans ,Food science ,chemistry.chemical_classification ,Reactive oxygen species ,Oryza sativa ,Magnesium ,technology, industry, and agriculture ,Oryza ,General Medicine ,Pollution ,Soil contamination ,Oxidative Stress ,chemistry ,Nanoparticles ,Magnesium Oxide - Abstract
Arsenic (As) accumulation catastrophically disturbs the stability of agricultural systems and human health. Rice easily accumulates a high amount of As from agriculture fields as compare with other cereal crops. Hence, innovative soil remediation methods are needed to deal with the detrimental effects of As on human health causing food security challenges. Here, we report the green synthesis and characterization of magnesium oxide nanoparticles (MgO-NPs) from a native Enterobacter sp. strain RTN2, which was genetically identified through 16S rRNA gene sequence analysis. The biosynthesis of MgO-NPs in reaction mixture was confirmed by UV–vis spectral analysis. X-ray diffraction (XRD) and fourier transform-infrared spectroscopy (FTIR) analysis showed the crystalline nature and surface properties of MgO-NPs, respectively. Moreover, electron microscopy (SEM-EDS, and TEM) imaging confirmed the synthesis of spherical shape of MgO-NPs with variable NPs sizes ranging from 38 to 57 nm. The results revealed that application of MgO-NPs (200 mg kg−1) in As contaminated soil significantly increased the plant biomass, antioxidant enzymatic contents, and decreased reactive oxygen species and acropetal As translocation as compared with control treatment. The study concluded that biogenic MgO-NPs could be used to formulate a potent nanofertilizer for sustainable rice production in metal contaminated soils.
- Published
- 2021
40. Green molybdenum nanoparticles-mediated bio-stimulation of Bacillus sp. strain ZH16 improved the wheat growth by managing in planta nutrients supply, ionic homeostasis and arsenic accumulation
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Suliman Mohammed Alghanem, Muhammad Mudassir Nazir, Usman Ijaz, Temoor Ahmed, Awatif M. Abdulmajeed, Shafaqat Ali, Muhammad Rizwan, Bin Li, Muhammad Noman, and Haifa Abdulaziz S. Alhaithloul
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Environmental Engineering ,Health, Toxicology and Mutagenesis ,chemistry.chemical_element ,Bacillus ,Rhizobacteria ,Plant Roots ,Arsenic ,chemistry.chemical_compound ,Nutrient ,Environmental Chemistry ,Homeostasis ,Food science ,Waste Management and Disposal ,Soil Microbiology ,Triticum ,Molybdenum ,Strain (chemistry) ,food and beverages ,Nutrients ,Contamination ,Phosphate ,Pollution ,Holobiont ,chemistry ,Soil water ,Nanoparticles - Abstract
The present work mechanistically addressed the problem of arsenic (As) contamination in agricultural soils by using locally isolated Bacillus sp. strain ZH16 and biogenic molybdenum nanoparticles (MoNPs) simultaneously for the first time. The interactions of MoNPs with strain ZH16 and ZH16-inoculated wheat plants were examined under As non-spiked and spiked conditions. The biogenic MoNPs showed efficient biocompatibility with strain ZH16 by promoting indole-3-acetic acid synthesis, phosphate solubilization and ACC deaminase activity without and with As stress. The results from greenhouse experiment revealed that co-application of biogenic MoNPs and bacterial strain ZH16 significantly promoted the morphological parameters, nutrients content and ionic balance of wheat plants under normal and As spiked conditions. Furthermore, combining the bacterial strain ZH16 with biogenic MoNPs dramatically reduced As translocation in plants (30.3%) as compared to ZH16-inoculated wheat plants. Conclusively, our results elucidate the importance of synergistic application of plant growth promoting rhizobacteria (PGPR) and biogenic MoNPs to counteract global food safety issues in a sustainable manner. The biogenic NPs could serve as stabilizing agent for PGPR by facilitating their colonization in plant holobiont regardless of environmental conditions. These novel advancements will provide new insights into nano-oriented PGPR research in the agricultural sector.
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- 2021
41. Seed Priming with Brassinosteroids Alleviates Chromium Stress in Rice Cultivars via Improving ROS Metabolism and Antioxidant Defense Response at Biochemical and Molecular Levels
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Jin Hu, Abeer Hashem, Muhammad Shahid, Jiaxin Liu, Temoor Ahmed, Jianyu An, Farwa Basit, Al-Bandari Fahad Al-Arjani, Elsayed Fathi Abd_Allah, Yajing Guan, Min Chen, Muhammad Noman, Mashail Fahad S. Alsayed, and Abdulaziz A. Alqarawi
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0106 biological sciences ,Antioxidant ,Physiology ,medicine.medical_treatment ,Clinical Biochemistry ,Priming (agriculture) ,RM1-950 ,010501 environmental sciences ,Photosynthesis ,01 natural sciences ,Biochemistry ,Article ,medicine ,Cultivar ,heavy metals ,Molecular Biology ,0105 earth and related environmental sciences ,Chemistry ,rice ,food and beverages ,Cell Biology ,APX ,Horticulture ,Point of delivery ,antioxidants ,brassinosteroids ,Germination ,Shoot ,Therapeutics. Pharmacology ,chromium ,010606 plant biology & botany - Abstract
This research was performed to explore the vital role of seed priming with a 0.01 µM concentration of brassinosteroids (EBL) to alleviate the adverse effects of Cr (100 µM) in two different rice cultivars. Seed priming with EBL significantly enhanced the germination attributes (germination percentage, germination energy, germination index, and vigor index, etc.), photosynthetic rate as well as plant growth (shoot and root length including the fresh and dry weight) under Cr toxicity as compared to the plants primed with water. Cr toxicity induced antioxidant enzyme activities (SOD, POD, CAT, and APX) and ROS level (MDA and H2O2 contents) in both rice cultivars, however, a larger increment was observed in YLY-689 (tolerant) than CY-927 (sensitive) cultivar. EBL application stimulatingly increased antioxidant enzyme activities to scavenge ROS production under Cr stress. The gene expression of SOD and POD in EBL-primed rice plants followed a similar increasing trend as observed in the case of enzymatic activities of SOD and POD compared to water-primed rice plants. Simultaneously, Cr uptake was observed to be significantly higher in the water-primed control compared to plants primed with EBL. Moreover, Cr uptake was significant in YLY-689 compared to CY-927. In ultra-structure studies, it was observed that EBL priming relieved the rice plants from sub-cellular damage. Conclusively, our research indicated that seed priming with EBL could be adopted as a promising strategy to enhance rice growth by copping the venomous effect of Cr.
- Published
- 2021
42. Bioinspired Green Synthesis of Zinc Oxide Nanoparticles from a Native Bacillus cereus Strain RNT6: Characterization and Antibacterial Activity against Rice Panicle Blight Pathogens Burkholderia glumae and B. gladioli
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Irfan Manzoor, Muhammad Noman, Muhammad Shahid, Temoor Ahmed, Khaled S Allemailem, Zhifeng Wu, Jinyan Luo, Faris Alrumaihi, Hubiao Jiang, and Bin Li
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ZnONPs ,General Chemical Engineering ,Bacillus cereus ,02 engineering and technology ,lcsh:Chemistry ,03 medical and health sciences ,antibacterial activity ,Burkholderia glumae ,Blight ,General Materials Science ,nanopesticides ,Agar diffusion test ,Food science ,030304 developmental biology ,Panicle ,0303 health sciences ,biology ,Chemistry ,rice pathogen ,021001 nanoscience & nanotechnology ,biology.organism_classification ,16S ribosomal RNA ,Plant disease ,lcsh:QD1-999 ,biosynthesis ,0210 nano-technology ,Antibacterial activity - Abstract
Burkholderia glumae and B. gladioli are seed-borne rice pathogens that cause bacterial panicle blight (BPB) disease, resulting in huge rice yield losses worldwide. However, the excessive use of chemical pesticides in agriculture has led to an increase in environmental toxicity. Microbe-mediated nanoparticles (NPs) have recently gained significant attention owing to their promising application in plant disease control. In the current study, we biologically synthesize zinc oxide nanoparticles (ZnONPs) from a native Bacillus cereus RNT6 strain, which was taxonomically identified using 16S rRNA gene analysis. The biosynthesis of ZnONPs in the reaction mixture was confirmed by using UV–Vis spectroscopy. Moreover, XRD, FTIR, SEM-EDS, and TEM analysis revealed the functional groups, crystalline nature, and spherical shape of ZnONPs with sizes ranging from 21 to 35 nm, respectively. Biogenic ZnONPs showed significant antibacterial activity at 50 µg mL−1 against B. glumae and B. gladioli with a 2.83 cm and 2.18 cm zone of inhibition, respectively, while cell numbers (measured by OD600) of the two pathogens in broth culture were reduced by 71.2% and 68.1%, respectively. The ultrastructure studies revealed the morphological damage in ZnONPs-treated B. glumae and B. gladioli cells as compared to the corresponding control. The results of this study revealed that ZnONPs could be considered as promising nanopesticides to control BPB disease in rice.
- Published
- 2021
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43. Chromatic Toxicity Bioassay of Water through Bacterial Ferricyanide Reduction
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Muhammad Noman Syed, Parus Shaikh, Maheen Shamim, and Zara Kanwal
- Subjects
Reduction (complexity) ,chemistry.chemical_compound ,Chromatography ,Chemistry ,Toxicity ,Bioassay ,Chromatic scale ,Ferricyanide - Abstract
Water quality assessment demands a precise anatomization of specimens that comply with acclaimed water purity standards. Today, the growing number of toxicants and their synergistic consequences make it necessary to develop general toxicity assays able to examine and determine water pollution. Contemporary general toxicity methods hinder specimen analysis due to their prolonged operation protocols. Also, the equipment involved is very expensive that not everyone can afford it. In an effort to resolve these drawbacks, a quick and cost effective toxicity bioassay based on chromatic changes related to bacterial ferricyanide reduction is introduced here. E.coli cells (Model Bacteria) were stably confined on four supports: Cellulose-based Paper Discs, Silica 60, Polystyrene, and Acrylic Beads, which remained useful for a long period at -20ºC. Copper was used as a model toxic agent to perform Bioassay Assessment. Chromatic changes related to bacterial ferricyanide reduction were determined by visual inspection. Cellulose Paper Discs, Polystyrene, and Acrylic beads showed good results and better viability, while Silica 60 proved itself as a weak support and resulted in poor viability.
- Published
- 2021
44. Biogenic copper nanoparticles produced by using the Klebsiella pneumoniae strain NST2 curtailed salt stress effects in maize by modulating the cellular oxidative repair mechanisms
- Author
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Muhammad Shahid, Fayza Kouadri, Muhammad Bilal Khan Niazi, Suliman Mohammed Alghanem, Mohsin Zafar, Muhammad Qasim, Awatif M. Abdulmajeed, Muhammad Noman, Naveed Ahmad, Shehbaz Ali, and Temoor Ahmed
- Subjects
Soil salinity ,Health, Toxicology and Mutagenesis ,0211 other engineering and technologies ,chemistry.chemical_element ,Metal Nanoparticles ,02 engineering and technology ,010501 environmental sciences ,Biosynthesis ,01 natural sciences ,Salt Stress ,Zea mays ,Environmental pollution ,Antioxidants ,Lipid peroxidation ,chemistry.chemical_compound ,Dry weight ,Microscopy, Electron, Transmission ,RNA, Ribosomal, 16S ,Spectroscopy, Fourier Transform Infrared ,GE1-350 ,Food science ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,021110 strategic, defence & security studies ,Reactive oxygen species ,CuNPs ,Strain (chemistry) ,Public Health, Environmental and Occupational Health ,General Medicine ,Pollution ,Copper ,Maize ,Salinity ,Environmental sciences ,Klebsiella pneumoniae ,Oxidative Stress ,chemistry ,TD172-193.5 ,Shoot ,Microscopy, Electron, Scanning - Abstract
The negative effects of salinity on plant growth and physiology are well-established, which is one of the major threats to food security in semi-arid and arid regions of the world. The current research focuses on biosynthesis of copper nanoparticles (CuNPs) from a bacterial strain NST2, which was genetically identified as Klebsiella pneumoniae based on taxonomic identity of 16S rRNA gene. The strain was selected for bioprospecting of CuNPs owing to its Cu tolerance potential. The biologically-synthesized CuNPs were confirmed in culture by using ultraviolet visible spectroscopy. The material characteristics of green CuNPs were further investigated by using Fourier transform infrared spectroscopy, X-ray diffractometer, scanning electron microscopy and transmission electron microscopy, where crystallite size was ranged from 22.44 nm to 44.26 nm and particles were stabilized by various functional groups, such as carbonyl and amine groups. When 100 mg kg−1 of green CuNPs were mixed in saline soil in a pot experiment, the maize plants showed increased root and shoot length (43.52% and 44.06%, respectively), fresh weight (46.05% and 51.82%, respectively) and dry weight (47.69% and 30.63%, respectively) in comparison to control maize plants without CuNPs application. Moreover, green CuNPs at their highest treatment level (100 mg kg−1 of soil) counteracted the lipid peroxidation and oxidative damage in maize plants by promoting the activities of antioxidants and demoting the cellular levels of reactive oxygen species and ionic contents of Na+ and Cl-. Conclusively, biogenic CuNPs is an emerging and promising technique, which could replace traditional methods of salinity management in agricultural soils.
- Published
- 2021
45. Novel perovskite solar cell with Distributed Bragg Reflector
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Waqas Farooq, Shanshan Tu, Syed Asfandyar Ali Kazmi, Sadaqat ur Rehman, Adnan Daud Khan, Haseeb Ahmad Khan, Muhammad Waqas, Obaid ur Rehman, Haider Ali, and Muhammad Noman
- Subjects
Bromides ,Metallic Lead ,Light ,Amorphous Solids ,Science ,Materials Science ,Hazardous Materials ,Methylamines ,Solar Energy ,Materials ,Titanium ,Multidisciplinary ,Optical Materials ,Physics ,Electromagnetic Radiation ,Chemical Compounds ,Oxides ,Calcium Compounds ,Iodides ,Models, Theoretical ,Energy and Power ,Chemistry ,Lead ,Photovoltaic Power ,Physical Sciences ,Sunlight ,Engineering and Technology ,Medicine ,Solar Radiation ,Alternative Energy ,Glass ,Algorithms ,Research Article ,Chemical Elements - Abstract
This paper reports numerical modeling of perovskite solar cell which has been knotted with Distributed Bragg Reflector pairs to extract high energy efficiency. The geometry of the proposed cells is simulated with three different kinds of perovskite materials including CH3NH3PbI3, CH3NH3PbBr3, and CH3NH3SnI3. The toxic perovskite material based on Lead iodide and lead bromide appears to be more efficient as compared to non-toxic perovskite material. The executed simulated photovoltaic parameters with the highest efficient structure are open circuit voltage = 1.409 (V), short circuit current density = 24.09 mA/cm2, fill factor = 86.18%, and efficiency = 24.38%. Moreover, a comparison of the current study with different kinds of structures has been made and surprisingly our novel geometry holds enhanced performance parameters that are featured with back reflector pairs (Si/SiO2). The applied numerical approach and presented designing effort of geometry are beneficial to obtain results that have the potential to address problems with less efficient thin-film solar cells.
- Published
- 2021
46. Physicochemical and Nutritional Characterization of Mushroom Powder Enriched Muffins
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Muhammad Farooq, Allah Rakha, Ibrar Ahmad, Shabir Ahmed, Iftikhar Ahmed Solangi, Muhammad Noman Khan, Aamna Shakoor, Shoaib Khan, Wang Yunyang, Jawad Ul Hassan, and Muhammad Bakhtiar
- Subjects
Mushroom ,Chemistry ,Food science ,Characterization (materials science) - Published
- 2021
47. Erythroid induction activity of Aquilegia fragrans and Aquilegia pubiflora and identification of compounds using liquid chromatography-tandem mass spectrometry
- Author
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Faraz Ul Haq, Syed Ghulam Musharraf, F Ahmed, Muhammad Noman Khan, Nudrat Aziz, Adnan Ali, and Hesham R. El-Seedi
- Subjects
Multidisciplinary ,Chromatography ,biology ,Chemistry ,Aquilegia ,Biochemistry and Molecular Biology ,02 engineering and technology ,010501 environmental sciences ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Fetal hemoglobin ,01 natural sciences ,Aquilegia fragrans ,beta-thalassemia ,Liquid chromatography–mass spectrometry ,β-thalassemia ,Aquilegia pubiflora ,0210 nano-technology ,lcsh:Science (General) ,Biokemi och molekylärbiologi ,0105 earth and related environmental sciences ,lcsh:Q1-390 - Abstract
Aquilegia fragrans (AF) and Aquilegia pubiflora (AP) are the two medicinally important species of genus Aquilegia used for the treatment of various diseases and infections. This paper describes the potential of fetal hemoglobin induction activity of the methanolic extracts of AF and AP in K562 cell line. AF and AP have shown 27.147 +/- 1.376 and 32.786 +/- 1.048 percent erythroid induction, respectively at 15.625 (mg/mL) concentration which suggested that both plants can be the source of potential fetal hemoglobin inducers and may be used for the treatment of beta-thalassemia. Phytochemical analyses of both species were also evaluated by using high-resolution LC-ESI-QTOF-MS/MS techniques. A Total of thirty compounds were identified using positive and negative ionization modes. The identification was based on the matching of high-resolution masses, isotopic pattern, and MS/MS fragmentation. Several statistical analyses were performed to evaluate the distribution of compounds in both species. Identified compounds belong to various classes including flavonoids, steroids, lignans, terpenoids, benzofuran and coumarins. The established chemical fingerprints will be helpful in standardization and quality control of plant extracts.
- Published
- 2021
48. Chemical fingerprinting of three Anemone species and an adulteration study to detect cross mixing of medicinal plants by HPLC-HR-ESI-MS/MS method
- Author
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Hamna Shadab, Muhammad Noman Khan, Syed Ghulam Musharraf, Adeeba Khadim, Muzna Syed, Hesham R. El-Seedi, and Anjum Perveen
- Subjects
Electrospray ,Science (General) ,Electrospray ionization ,Anemone obtusiloba ,02 engineering and technology ,010501 environmental sciences ,Ziziphus jujube ,01 natural sciences ,High-performance liquid chromatography ,Analytical Chemistry ,Q1-390 ,food ,Analytisk kemi ,LC-ESI-MS ,Medicinal plants ,0105 earth and related environmental sciences ,Multidisciplinary ,Chromatography ,biology ,Chemistry ,Botany ,food and beverages ,Anemone ,MS ,Botanik ,LC-ESI-MS/MS ,021001 nanoscience & nanotechnology ,biology.organism_classification ,food.food ,Anemone falconeri ,Ziziphus jujuba ,Plant species ,Anemone tetrasepala ,0210 nano-technology ,Chemical fingerprinting - Abstract
The adulteration of plant raw materials used for the preparation of herbal drugs with foreign plant material is one of the important issues in the quality control of herbal products. Chemical fingerprinting is a well-known approach for the characterization of secondary metabolites associated with the plant species and can be used for quality control of plant material. The current study centred on the development of chemical fingerprinting of three medicinal plants of genus Anemone including A. obtusiloba, A. falconeri and A tetrasepala through identification of their metabolites using LC-ESI-QTOF-MS/MS analysis. Thirty compounds were identified by using high-resolution positive and negative electrospray- ionization (ESI) modes and MS/MS analysis. The identified compounds belong to diterpenoids, alkaloids, phenols, flavonoids and other classes and their distribution among the analysed species was studied using different statistical tools. Moreover, an LC-HR-ESI-MS/MS method was developed to detect the cross mixing of A. obtusiloba with Ziziphus jujuba. Seven chromatographically differentiative peaks confined to A. obtusiloba were selected to detect its contamination in adulterated samples. The method was able to detect as low as 20% mixing of A. obtusiloba in Z. jujuba. This study can play a significant role to manage the quality control of herbal medicines and to identify lead natural products of these plants.
- Published
- 2021
49. Iron oxide nanoparticles ameliorated the cadmium and salinity stresses in wheat plants, facilitating photosynthetic pigments and restricting cadmium uptake
- Author
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Natasha Manzoor, Liaqat Ali, Muhammad Shahid, Muhammad Mudassir Nazir, Rainer Schulin, Taghreed S. Alnusaire, Temoor Ahmed, Bin Li, Muhammad Noman, and Gang Wang
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Salinity ,Environmental Engineering ,Soil salinity ,010504 meteorology & atmospheric sciences ,Iron oxide ,chemistry.chemical_element ,010501 environmental sciences ,Photosynthesis ,01 natural sciences ,Salt Stress ,chemistry.chemical_compound ,Soil ,Nutrient ,Environmental Chemistry ,Soil Pollutants ,Waste Management and Disposal ,Triticum ,0105 earth and related environmental sciences ,Cadmium ,Pantoea ,food and beverages ,Pollution ,Bioavailability ,chemistry ,Environmental chemistry ,Soil water ,Magnetic Iron Oxide Nanoparticles - Abstract
Cadmium and salinity are the major threats to environmental resources and agricultural practice worldwide. The present work aims green synthesis, characterization, and application of iron oxide nanoparticles for co-alleviation of Cd and salt stresses in wheat plants. The iron oxide NPs were synthesized from a native bacterial strain, Pantoea ananatis strain RNT4, yielding a spherical FeO-NPs with a size ranging from 19 to 40 nm evidenced by scanning electron microscopy (SEM) and transmission electron microscopy (TEM) images. Results showed that application of 100 mg kg−1 of the bioengineered FeO-NPs in an original saline soil stimulated wheat plant growth, gaining 36.7% of additional length as compared with the control scenarios, via alleviating the detrimental effects of abiotic stresses and thereby reprogramming the morpho-physiological state of wheat plants. In addition, the presence of FeO-NPs in soil significantly increased the nutrient concentrations of N, P and K+, while reducing the Na+ and Cl− components in the wheat grain. Interestingly, application of the FeO-NPs in Cd-polluted soils eventually reduced wheat plant uptake of Cd by 72.5%, probably due to the adsorption of Cd onto the large surface of NPs and thereby, constraining Cd bioavailability to the plants. It provides the first evidence that a FeO-NPs-based treatment could be a candidate agricultural strategy for mitigating the Cd and salt stresses in Cd-polluted saline soils for safe agriculture practice.
- Published
- 2020
50. Nanoparticle-based amelioration of drought stress and cadmium toxicity in rice via triggering the stress responsive genetic mechanisms and nutrient acquisition
- Author
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Abeer Hashem, Al-Bandari Fahad Al-Arjani, Bin Li, Muhammad Shahid, Liaqat Ali, Elsayed Fathi Abd_Allah, Muhammad Noman, Abdulaziz A. Alqarawi, Natasha Manzoor, Muhammad Abdullah, Gang Wang, and Temoor Ahmed
- Subjects
Antioxidant ,Health, Toxicology and Mutagenesis ,medicine.medical_treatment ,0211 other engineering and technologies ,Iron oxide ,chemistry.chemical_element ,02 engineering and technology ,010501 environmental sciences ,Photosynthetic efficiency ,Photosynthesis ,01 natural sciences ,Ferric Compounds ,Antioxidants ,Green synthesis ,chemistry.chemical_compound ,Nutrient ,medicine ,GE1-350 ,Biomass ,0105 earth and related environmental sciences ,chemistry.chemical_classification ,Abiotic component ,021110 strategic, defence & security studies ,Reactive oxygen species ,Cadmium ,Drought ,Public Health, Environmental and Occupational Health ,food and beverages ,Oryza ,General Medicine ,Nutrients ,Pollution ,Droughts ,Environmental sciences ,chemistry ,TD172-193.5 ,Biophysics ,Nanoparticles ,Environmental Pollutants ,Rice ,Environmental Pollution - Abstract
Cadmium and drought are the most destructive of the abiotic stresses with negative consequences in terms of impaired metabolism, restricted nutrient use efficiency and disruptive photosynthesis of plants. The present study investigated the mitigation strategy of both aforementioned stresses by the application of iron oxide (IONPs) and hydrogel nanoparticles (HGNPs) simultaneously probably for the first time. IONPs were biofabricated by using a locally identified Bacillus strain RNT1, while HGNPs were produced chemically followed by the confirmation and characterization of both NPs through nanomaterials characterization techniques. Results of FTIR and XRD showed the capping of NPs by different functional groups together with their crystalline structure, respectively. SEM and TEM analysis showed the spherical shape along with the particle size ranging from 18 to 94 nm of both NPs, while EDS analysis confirmed the elemental purity of NPs. The results revealed that IONPs-treated rice plants increased biomass, antioxidant enzyme contents, photosynthesis efficiency, nutrient acquisition together with the decrease in reactive oxygen species and acropetal Cd translocation under normal and drought stress conditions as compared with control plants. Furthermore, the expression of the Cd transporter genes, OsHMA2, OsHMA3 and OsLCT1 were curtailed in NPs-treated rice plants under normal and drought stress conditions. The overall significance of the study lies in devising the NPs-based solutions of increasing heavy metal pollution and water availability challenges being faced the farmers around the world.
- Published
- 2020
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