287 results on '"D Stark"'
Search Results
2. Ne-22 Ion-Beam Radiation Damage to DNA: From Initial Free Radical Formation to Resulting DNA-Base Damage
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Samuel Ward, David Becker, Thomas Baumann, Michael D. Sevilla, Pawel Jaruga, Miral Dizdaroglu, Melis Kant, Erdem Coskun, Alexander D. Stark, and Amitava Adhikary
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Ion beam ,Chemistry ,DNA damage ,General Chemical Engineering ,Radical ,General Chemistry ,Photochemistry ,Article ,law.invention ,chemistry.chemical_compound ,law ,Radiation damage ,Electron paramagnetic resonance ,Spectroscopy ,QD1-999 ,Free Radical Formation ,DNA - Abstract
We report on the physicochemical processes and the products of DNA damage involved in Ne-22 ion-beam radiation of hydrated (12 ± 3 H2O/nucleotide) salmon testes DNA at 77 K. Free radicals trapped at 77 K were identified using electron spin resonance (ESR) spectroscopy. The measurement of DNA damage using two different techniques of mass spectrometry revealed the formation of numerous DNA products. Results obtained by ESR spectroscopy showed that as the linear energy transfer (LET) of the ion-beam radiation increases along the beam track, the production of DNA radicals correspondingly increases until just before the Bragg peak is reached. Yields of DNA products along the ion-beam track were in excellent agreement with the radical production. This work is the first to use the combination of ESR spectroscopy and mass spectrometric techniques enabling a better understanding of mechanisms of radiation damage to DNA by heavy ion beams detailing the formation of DNA free radicals and their subsequent products.
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- 2021
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3. Sensomics-Assisted Flavor Decoding of Dairy Model Systems and Flavor Reconstitution Experiments
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Christian Schmid, Corinna Dawid, Johanna Kreissl, Thomas Hofmann, Ulrich Kulozik, Timo D. Stark, Florian Utz, and Caren Tanger
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0106 biological sciences ,Hexanoic acid ,Volatile Organic Compounds ,Chromatography ,Acetoin ,010401 analytical chemistry ,food and beverages ,General Chemistry ,Phenylacetic acid ,01 natural sciences ,Diacetyl ,Gas Chromatography-Mass Spectrometry ,0104 chemical sciences ,Flavoring Agents ,Butyric acid ,chemistry.chemical_compound ,chemistry ,Taste ,Odorants ,Gas chromatography ,General Agricultural and Biological Sciences ,Citric acid ,Solid Phase Microextraction ,Flavor ,010606 plant biology & botany - Abstract
The whole sensometabolome of a typical dairy milk dessert was decoded to potentially serve as a blueprint for further flavor optimization steps of functional fat-reduced food. By applying the sensomics approach, a wide range of different dairy volatiles, semi and nonvolatiles, were analyzed by ultrahigh-performance liquid chromatography tandem mass spectrometry with or without derivatization presteps. While for volatile sulfur compounds with low odor thresholds, headspace solid-phase microextraction gas chromatography was established, abundant carbohydrates and organic acids were quantified by quantitative 1H nuclear magnetic resonance spectroscopy. Validated quantitation, sensory reconstitution, and omission studies highlighted eight flavor-active compounds, namely, diacetyl, δ-tetra-, δ-hexa-, and δ-octadecalactone, sucrose, galactose, lactic acid, and citric acid as indispensable for flavor recombination. Furthermore, eight odorants (acetaldehyde, acetic acid, butyric acid, methanethiol, phenylacetic acid, dimethyl sulfide, acetoin, and hexanoic acid), all with odor activity values >1, additionally contributed to the overall flavor blueprint. Within this work, a dairy flavor analytical toolbox covering four different high-throughput methods could successfully be established showing potential for industrial applications.
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- 2021
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4. Breast milk n-3 long-chain polyunsaturated fatty acids and blood pressure
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Barbara Heude, Alet H. Wijga, Ken D. Stark, Hans Bisgaard, Signe Bruun, Rebecca K. Vinding, Kim F. Michaelsen, Klaus Bønnelykke, Henriette Boye Kyhl, Henriette A. Smit, Carel Thijs, Steffen Husby, Lenie van Rossem, Martine Armand, Jonathan Y. Bernard, Lotte Lauritzen, Utrecht University [Utrecht], Centre de résonance magnétique biologique et médicale (CRMBM), Aix Marseille Université (AMU)-Assistance Publique - Hôpitaux de Marseille (APHM)-Centre National de la Recherche Scientifique (CNRS), Centre de Recherche Épidémiologie et Statistique Sorbonne Paris Cité (CRESS (U1153 / UMR_A_1125 / UMR_S_1153)), Conservatoire National des Arts et Métiers [CNAM] (CNAM), HESAM Université - Communauté d'universités et d'établissements Hautes écoles Sorbonne Arts et métiers université (HESAM)-HESAM Université - Communauté d'universités et d'établissements Hautes écoles Sorbonne Arts et métiers université (HESAM)-Université Sorbonne Paris Cité (USPC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of Copenhagen = Københavns Universitet (UCPH), Odense University Hospital (OUH), Epidémiologie cardiovasculaire et métabolique, Université Paris-Sud - Paris 11 (UP11)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Institut National de la Santé et de la Recherche Médicale (INSERM), University of Waterloo [Waterloo], Maastricht University [Maastricht], National Institute for Public Health and the Environment [Bilthoven] (RIVM), Netherlands Heart Foundation (Grant no. 2013T025), Conservatoire National des Arts et Métiers [CNAM] (CNAM)-Université Sorbonne Paris Cité (USPC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Paris (UP)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of Copenhagen = Københavns Universitet (KU), Odense University Hospital, Department of Epidemiology, Maastricht University [Maastricht]-School for Public Health and Primary Care (CAPHRI), Epidemiologie, RS: CAPHRI - R5 - Optimising Patient Care, Obstetrics & Gynecology, and Armand, Martine
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Male ,LACTATION ,Docosahexaenoic Acids ,Breastfeeding ,CHILDHOOD ,Medicine (miscellaneous) ,Physiology ,HEART-RATE ,030204 cardiovascular system & hematology ,Breast milk ,FISH-OIL SUPPLEMENTATION ,03 medical and health sciences ,0302 clinical medicine ,LATER LIFE ,Lactation ,Fatty Acids, Omega-3 ,Faculty of Science ,medicine ,Humans ,030212 general & internal medicine ,Fatty acids ,Children ,chemistry.chemical_classification ,Nutrition and Dietetics ,Milk, Human ,business.industry ,food and beverages ,Original Contribution ,ARACHIDONIC-ACID ,DOCOSAHEXAENOIC ACID ,PREVENTION ,[SDV.AEN] Life Sciences [q-bio]/Food and Nutrition ,Breast Feeding ,Blood pressure ,medicine.anatomical_structure ,PREGNANCY ,chemistry ,Docosahexaenoic acid ,Meta-analysis ,Cohort ,Fatty Acids, Unsaturated ,INFANCY ,Female ,business ,[SDV.AEN]Life Sciences [q-bio]/Food and Nutrition ,Polyunsaturated fatty acid - Abstract
Purpose It is controversial whether a higher intake of n-3 long-chain polyunsaturated fatty acids (n-3 LC PUFA) through breastfeeding is associated or not to a lower blood pressure (BP) during childhood. We aimed to clarify this point by undertaking a meta-analysis involving the data from seven European birth cohorts. Methods We searched https://www.birthcohort.net for studies that had collected breast milk samples, and had at least one BP measurement in childhood. Principal investigators were contacted, and all agreed to share data. One additional study was identified by contacts with the principal investigators. For each cohort, we analyzed the association of breast milk n-3 LC PUFAs with systolic and diastolic BP with linear mixed effects models or linear regression, and pooled the estimates with a random effects model. We also investigated age-specific and sex-specific associations. Results A total of 2188 participants from 7 cohorts were included. Overall, no associations between breast milk n-3 LC PUFAs and BP were observed. In the pooled analysis, each 0.1 wt% increment in breast milk docosahexaenoic acid (DHA) was associated with a 1.19 (95% CI − 3.31, 0.94) mmHg lower systolic BP. Associations were similar for boys and girls and at different ages. Conclusion In this individual participant meta-analysis, we found no evidence for an association between breast milk n-3 LC PUFAs and BP.
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- 2021
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5. Molecularization of Foam-Active Saponins from Sugar Beet Side Streams (Beta vulgaris ssp. vulgaris var. altissima)
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Hanna Salminen, Corinna Dawid, Jochen Weiss, Thomas Hofmann, Katharina Hochreiter, Theo Ralla, Matthias Edelmann, and Timo D. Stark
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chemistry.chemical_classification ,biology ,Pulp (paper) ,fungi ,Saponin ,food and beverages ,General Chemistry ,engineering.material ,biology.organism_classification ,carbohydrates (lipids) ,Horticulture ,stomatognathic system ,chemistry ,engineering ,Sugar beet ,General Agricultural and Biological Sciences - Abstract
This work focuses on the isolation and characterization of saponins with a very low bitter intensity originating from sustainable plant materials, in particular the sugar beet pulp by-product strea...
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- 2020
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6. A new phytoecdysteroid from the stem bark of Vitex cienkowskii
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Wolfgang Vierling, Thomas Hofmann, Sonja Fröhlich, Alain Bertrand Dongmo, Timo D. Stark, Patrick Weiss, and Julius Rami
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0303 health sciences ,Stem bark ,Traditional medicine ,biology ,030309 nutrition & dietetics ,Vitex ,Metabolite ,010401 analytical chemistry ,Phytoecdysteroid ,General Chemistry ,biology.organism_classification ,01 natural sciences ,Biochemistry ,Industrial and Manufacturing Engineering ,0104 chemical sciences ,03 medical and health sciences ,chemistry.chemical_compound ,chemistry ,Metabolome ,Food Science ,Biotechnology - Abstract
To investigate differences in the metabolome of the stem bark of Vitex cienkowskii harvested at three different locations and three different seasons, their extracts were analyzed by means of UPLC–ESI–IMS–TOF MSe. One marker metabolite was isolated and chemically characterized, which was identified as the new compound 20,24-dihydroxy,24-hydroxymethylecdysone (1). IMS showed two drift time species for 1 which could be used as new and additional characteristic compound parameters in compound identification to reduce dereplication and false positives.
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- 2020
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7. Does polymorphisms in PPAR and APOE genes modify associations between fatty acid desaturase (FADS), n-3 long-chain PUFA and cardiometabolic markers in 8–11-year-old Danish children?
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Camilla T. Damsgaard, Ken D. Stark, Lotte Lauritzen, Stine Vuholm, and Marie N. Teisen
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0301 basic medicine ,chemistry.chemical_classification ,Apolipoprotein E ,medicine.medical_specialty ,030109 nutrition & dietetics ,Nutrition and Dietetics ,biology ,Cholesterol ,Insulin ,medicine.medical_treatment ,Medicine (miscellaneous) ,030209 endocrinology & metabolism ,Minor allele frequency ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Endocrinology ,Fatty acid desaturase ,chemistry ,Internal medicine ,medicine ,biology.protein ,SNP ,Allele ,Polyunsaturated fatty acid - Abstract
n-3 Long-chain PUFA (LCPUFA) can improve cardiometabolic blood markers, but studies in children are limited. SNP in the FADS genes, which encode fatty acid desaturases, influence endogenous LCPUFA production. Moreover, SNP in genes that encode PPAR and apoE may modulate the effects of n-3 LCPUFA. We explored whether FADS polymorphisms were associated with blood cholesterol and TAG, insulin and glucose and whether polymorphisms in PPAR and APOE modified associations between FADS or n-3 LCPUFA status and the cardiometabolic blood markers. We measured fasting cholesterol and TAG, insulin, glucose and n-3 LCPUFA in 757 Danish 8–11-year-old children and genotyped SNP in FADS (rs1535 and rs174448), PPARG2 (rs1801282), PPARA (rs1800206) and APOE (rs7412+rs429358). Carriage of two FADS rs174448 major alleles was associated with lower TAG (P = 0·027) and higher HDL-cholesterol (P = 0·047). Blood n-3 LCPUFA was inversely associated with TAG and insulin in PPARG2 minor allele carriers and positively with LDL-cholesterol in major allele homozygotes (Pn-3 LCPUFA × rs180182 < 0·01). Associations between n-3 LCPUFA and cardiometabolic markers were not modified by APOE genotype (Pn-3 LCPUFA × APOE > 0·11), but interaction between FADS rs1535 and APOE showed that rs1535 major allele homozygotes who also carried APOE2 had higher HDL-cholesterol than all other genotype combinations (Prs1535 × APOE = 0·019, pairwise-P < 0·05). This indicates that FADS genotypes, which increase endogenous LCPUFA production, may beneficially affect children’s cardiometabolic profile in a partly APOE-dependent manner. Also, the degree to which children benefit from higher n-3 LCPUFA intake may depend on their PPARG2 genotype.
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- 2020
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8. The wheat species profiling by non-targeted UPLC–ESI–TOF-MS analysis
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Ludwig Friedrich, Thomas Hofmann, Patrick Weiss, and Timo D. Stark
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0303 health sciences ,Chromatography ,Non targeted ,030309 nutrition & dietetics ,Chemistry ,Esi tof ms ,Galactolipids ,04 agricultural and veterinary sciences ,General Chemistry ,040401 food science ,Biochemistry ,High-performance liquid chromatography ,Industrial and Manufacturing Engineering ,03 medical and health sciences ,0404 agricultural biotechnology ,Metabolome ,Food Science ,Biotechnology - Abstract
To investigate differences in the metabolome between ancient and modern Triticum varieties, a total of 15 varieties each of bread and durum wheat, spelt, emmer, and einkorn were cultivated and harvested at four different locations (Seligenstadt, Hohenheim, Eckartsweier, and Oberer Lindenhof), and their acetonitrile extracts were analyzed by means of UPLC–TOF MSe. Nine marker metabolites were clearly identified using reference or surrogate standard compounds including di- and triacylglycerides as well as galactolipids and enabling the discrimination of wheat species and their growing location.
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- 2020
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9. Fish oil supplementation in cancer patients. Capsules or nutritional drink supplements? A controlled study of compliance
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Nina Schmidt, Lene Baeksgaard, Jens Rikardt Andersen, Kell Østerlind, Grith Møller, Ken D. Stark, and Lotte Lauritzen
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Male ,0301 basic medicine ,Taste ,medicine.medical_specialty ,Cachexia ,Docosahexaenoic Acids ,Visual analogue scale ,Nausea ,Endocrinology, Diabetes and Metabolism ,medicine.medical_treatment ,Capsules ,Pilot Projects ,030209 endocrinology & metabolism ,Gastroenterology ,Beverages ,03 medical and health sciences ,Fish Oils ,0302 clinical medicine ,Neoplasms ,Internal medicine ,Fatty Acids, Omega-3 ,medicine ,Humans ,Aged ,Whole blood ,chemistry.chemical_classification ,Chemotherapy ,Cross-Over Studies ,030109 nutrition & dietetics ,Nutrition and Dietetics ,business.industry ,Cancer ,Middle Aged ,medicine.disease ,Fish oil ,Healthy Volunteers ,Eicosapentaenoic Acid ,chemistry ,Dietary Supplements ,Patient Compliance ,Female ,medicine.symptom ,business ,Polyunsaturated fatty acid - Abstract
Summary Background & aims Fish-oil, rich in Omega-3 long chain polyunsaturated fatty acids (n-3 LC PUFAs), may in high doses inhibit the development or progression of cancer cachexia. However, poor compliance to oral nutritional supplements is a well-known problem. We aimed to investigate acceptability and compliance to a nutritional drink with fish-oil compared to an equivalent dose of fish-oil administered as capsules in patients receiving chemotherapy for GI tract cancers. Moreover, we aimed to investigate, if there was a difference between a nutritional drink or capsules with respect to nutritional status and side effects. Finally, we aimed to examine, if n-3 LC PUFAs affect leukocyte and platelet counts, and markers of dose-limiting toxicities of chemotherapy. Methods We consecutively included 41 patients with advanced cancer in the controlled study. Patients were allocated (not randomized) to ingest either 10 capsules/day for four weeks or 400 mL/day of a nutritional drink with same dose of n-3 LC PUFA dose. Compliance was assessed by daily self-registration and n-3 LC PUFAs in whole blood. Side effects were assessed by 10 cm visual analog scales. Results Compliance and daily consumption of n-3 LC PUFAs were 96.4% (94.1–99.3) and 4.8 (4.7–4.9) g/day in the capsule group and 80.8 (55.4–93.6) % and 4.0 (2.8–4.7) g/day in the group, respectively (p ≤ 0.02). We found no differences between the groups with respect to changes in whole blood n-3 LC PUFAs, weight, nutritional status, acceptability or side effects. However, in the capsule group the whole blood n-3 LC PUFAs correlated negatively with the increase in nausea (rs = −0.39, p = 0.05), but not in the nutritional drink group. Nausea, reduced appetite and loose stools were of greatest importance for the deviations from recommended doses. The number of capsules had a negative impact on acceptability and compliance, whereas this was mainly related to taste and texture in the nutritional drink group. No changes in median thrombocyte or leukocyte blood counts were observed. Conclusions Fish oil in capsules appeared to result in better compliance compared to a nutritional drink with an equivalent dose of n-3 LC PUFAs. However, capsules and the drink did not differ with respect to the effect on nutritional status or side effects. Trial registration ClinicalTrials.gov Identifier NCT03751384 .
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- 2020
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10. Systematic investigation of the link between enzyme catalysis and cold adaptation
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Joanna Siegfried, Teanna Bautista-Leung, Catherine D. Stark, and Daniel Herschlag
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QH301-705.5 ,Science ,Short Report ,Isomerase ,evolutionary biochemistry ,General Biochemistry, Genetics and Molecular Biology ,Catalysis ,Enzyme catalysis ,chemistry.chemical_compound ,Biochemistry and Chemical Biology ,Ketosteroid ,None ,Biology (General) ,chemistry.chemical_classification ,biology ,General Immunology and Microbiology ,Chemistry ,General Neuroscience ,Active site ,General Medicine ,Adaptation, Physiological ,Enzymes ,Cold Temperature ,Enzyme ,enzyme rate ,cold adaptation ,biology.protein ,Biophysics ,Medicine ,Adaptation ,Function (biology) - Abstract
Cold temperature is prevalent across the biosphere and slows the rates of chemical reactions. Increased catalysis has been predicted to be a dominant adaptive trait of enzymes to reduced temperature, and this expectation has informed physical models for enzyme catalysis and influenced bioprospecting strategies. To systematically test rate enhancement as an adaptive trait to cold, we paired kinetic constants of 2223 enzyme reactions with their organism’s optimal growth temperature (TGrowth) and analyzed trends of rate constants as a function of TGrowth. These data do not support a general increase in rate enhancement in cold adaptation. In the model enzyme ketosteroid isomerase (KSI), there is prior evidence for temperature adaptation from a change in an active site residue that results in a tradeoff between activity and stability. Nevertheless, we found that little of the rate constant variation for 20 KSI variants was accounted for by TGrowth. In contrast, and consistent with prior expectations, we observed a correlation between stability and TGrowth across 433 proteins. These results suggest that temperature exerts a weaker selection pressure on enzyme rate constants than stability and that evolutionary forces other than temperature are responsible for the majority of enzymatic rate constant variation.
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- 2022
11. Macrolipidomic Profiling of Vegetable Oils: The Analysis of Sunflower Oils with Different Oleic Acid Content
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Juan J. Aristizabal-Henao and Ken D. Stark
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chemistry.chemical_classification ,Oleic acid ,chemistry.chemical_compound ,Chromatography ,chemistry ,Lipidomics ,Fatty acid ,Composition (visual arts) ,Mass spectrometry ,Tandem mass spectrometry ,Sunflower - Abstract
Conventional breeding techniques and genetic modifications have made it possible to alter the composition of vegetable oils. In recent years, the field of lipidomics has rapidly evolved due to technological developments in mass spectrometry. "Macrolipidomics" is an approach dedicated to detailed characterization of the most abundant lipids of a sample and has the potential to be useful for the profiling of commercial seed oils. Seed oils are composed largely of triacylglycerols (TAG) with various fatty acyls that can result in a number of isobaric and isomeric TAG species in each sample. Comprehensive methods for fatty acyl TAG characterization are still scarce. In this chapter, we describe the steps required to process and analyze different sunflower oils with altered oleic acid content to generate quantitative data for discrete fatty acyl species of TAG molecules. We utilized a dual ultra-high-performance liquid chromatography (UHPLC) serial coupling setup and untargeted tandem mass spectrometry (MS/MS) to quantitate 23 common TAG species in three sunflower oils containing 40% (low), 60% (mid), and 85% (high) oleic acid by weight.
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- 2021
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12. Impact of Phytochemicals on Viability and Cereulide Toxin Synthesis in Bacillus cereus Revealed by a Novel High-Throughput Method, Coupling an AlamarBlue-Based Assay with UPLC-MS/MS
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Elrike Frenzel, Monika Ehling-Schulz, Thomas Hofmann, Timo D. Stark, Veronika Walser, and Markus Kranzler
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food.ingredient ,Health, Toxicology and Mutagenesis ,Bacillus cereus ,Toxicology ,medicine.disease_cause ,chemistry.chemical_compound ,cereulide ,food ,medicine ,Viability assay ,Food science ,chemistry.chemical_classification ,high-throughput micro-scale method ,biology ,Gingerol ,Toxin ,Food additive ,Cereulide ,Hydroxycinnamic acid ,biology.organism_classification ,food additives ,chemistry ,Cereus ,Medicine - Abstract
Due to its food-poisoning potential, Bacillus cereus has attracted the attention of the food industry. The cereulide-toxin-producing subgroup is of particular concern, as cereulide toxin is implicated in broadscale food-borne outbreaks and occasionally causes fatalities. The health risks associated with long-term cereulide exposure at low doses remain largely unexplored. Natural substances, such as plant-based secondary metabolites, are widely known for their effective antibacterial potential, which makes them promising as ingredients in food and also as a surrogate for antibiotics. In this work, we tested a range of structurally related phytochemicals, including benzene derivatives, monoterpenes, hydroxycinnamic acid derivatives and vitamins, for their inhibitory effects on the growth of B. cereus and the production of cereulide toxin. For this purpose, we developed a high-throughput, small-scale method which allowed us to analyze B. cereus survival and cereulide production simultaneously in one workflow by coupling an AlamarBlue-based viability assay with ultraperformance liquid chromatography–mass spectrometry (UPLC-MS/MS). This combinatory method allowed us to identify not only phytochemicals with high antibacterial potential, but also ones specifically eradicating cereulide biosynthesis already at very low concentrations, such as gingerol and curcumin.
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- 2021
13. Distribution of the Emetic Toxin Cereulide in Cow Milk
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Timo D. Stark, Thomas Hofmann, Monika Ehling-Schulz, Corinna Dawid, Veronika Walser, and Markus Kranzler
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food.ingredient ,Health, Toxicology and Mutagenesis ,Bacterial Toxins ,Bacillus cereus ,interaction ,Food Contamination ,Toxicology ,medicine.disease_cause ,Cow milk ,lipids ,03 medical and health sciences ,chemistry.chemical_compound ,food ,Tandem Mass Spectrometry ,Depsipeptides ,medicine ,Animals ,Centrifugation ,B. cereus ,Food science ,LC-MS/MS ,030304 developmental biology ,Emetic toxin ,0303 health sciences ,biology ,030306 microbiology ,Toxin ,Communication ,Sunflower oil ,Cereulide ,biology.organism_classification ,food safety ,Milk ,chemistry ,Medicine ,Cattle ,Emetics ,Hydrophobic and Hydrophilic Interactions ,Bacteria ,Chromatography, Liquid - Abstract
Bacillus cereus is frequently associated with food-borne intoxications, and its emetic toxin cereulide causes emesis and nausea after consumption of contaminated foods. The major source for contamination is found within contaminated raw materials containing the highly chemically resistant cereulide, independent of vegetative bacteria cells. Up to date, non-existing removal strategies for cereulide evoke the question of how the toxin is distributed within a food sample, especially cow milk. Milk samples with different milk fat contents were incubated with purified cereulide, separated by centrifugation into a lipid and an aqueous phase, and cereulide was quantified in both fractions by SIDA-LC-MS/MS. By artificially increasing the milk fat content from 0.5% to 50%, the amount of cereulide recovered in the lipid phase and could be augmented from 13.3 to 78.6%. Further, the ratio of cereulide increased in the lipid phase of milk with additional plant-based lipid (sunflower oil) to 47.8%. This demonstrated a clear affinity of cereulide towards the hydrophobic, lipid phase, aligning with cereulide’s naturally strong hydrophobic properties. Therefore, an intensified cereulide analysis of lipid enriched dairy products to prevent severe cereulide intoxications or cross-contamination in processed foods is suggested.
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- 2021
14. Quantitating fatty acids in dried blood spots on a common collection card versus a novel wicking sampling device
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Jan Gunash, Ken D. Stark, and Juan J. Aristizabal-Henao
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Male ,0301 basic medicine ,Chromatography, Gas ,Clinical Biochemistry ,Palmitates ,030209 endocrinology & metabolism ,Blood volume ,Mass spectrometry ,Tandem mass spectrometry ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Tandem Mass Spectrometry ,law ,Stearates ,Humans ,Flame ionization detector ,chemistry.chemical_classification ,030109 nutrition & dietetics ,Chromatography ,Spots ,Fatty Acids ,Lysophosphatidylcholines ,Fatty acid ,Cell Biology ,chemistry ,Female ,Dried Blood Spot Testing ,Gas chromatography ,Capillary Action ,Chromatography, Liquid ,Polyunsaturated fatty acid - Abstract
Blood biomarkers of n - 3 polyunsaturated fatty acids can serve as indicators of dietary intake and benefits and/or disease risk. The use of dried blood spots for fatty acid analyses is increasing but most of the reported data is qualitative (relative percentages of total fatty acids). The ability to quantitate concentrations of fatty acids on a common blood spot collection card and a novel wicking device designed to collect 10 µL of blood was compared with a wet blood sample in ten young adult participants. Prior to this comparison, the collection materials were screened for contaminants by gas chromatography with flame ionization and liquid chromatography/tandem mass spectrometry, and the blood volume and blood spot area relationship of the collection card was confirmed using technical replicates. Palmitate and stearate were detected as free fatty acids on both collection materials and as lysophosphatidylcholines on the wicking device. The low amounts (1.0 µg) did not affect the quantitation of these fatty acids in either material. The relationship between blood volume and blood spot area was linear (r = 0.99, p 0.001) and it was determined that a 6 mm hole punch contained 9.6 µL of blood. When compared with wet blood, the fatty acid determinations from the dried blood spots were largely similar although there were some minor differences in low abundant fatty acids. Quantitative fatty acid determinations of dried blood spots are possible and should be reported along with relative percentage data to improve interpretation in the future.
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- 2019
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15. Formation and Characterization of Polyphenol-Derived Red Chromophores. Enhancing the Color of Processed Cocoa Powders: Part 1
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Daniel Germann, Thomas Hofmann, and Timo D. Stark
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0106 biological sciences ,Food Handling ,Color ,01 natural sciences ,law.invention ,chemistry.chemical_compound ,Tandem Mass Spectrometry ,law ,Chocolate ,Spectroscopy ,Electron paramagnetic resonance ,Cacao ,Molecular Structure ,010401 analytical chemistry ,Polyphenols ,Catechin ,General Chemistry ,Hydrogen-Ion Concentration ,Chromophore ,0104 chemical sciences ,Cocoa Powders ,Monomer ,chemistry ,Polyphenol ,Plant Preparations ,Powders ,General Agricultural and Biological Sciences ,Oxidation-Reduction ,Mass fraction ,010606 plant biology & botany ,Nuclear chemistry - Abstract
Although cocoa powder alkalization (Dutching) is a widely used industrial process to improve taste, dispersibility, and coloring of the final product, nevertheless knowledge about the compounds causing a change in coloring is fragmentary. By means of alkaline model reactions starting from the major cocoa polyphenol monomers, (+)-catechin or (-)-epicatechin, eight chromophores were derived from the first rearrangement product catechinic acid. LC-MS/MS analysis, one- and two dimensional-NMR, and electron paramagnetic resonance (EPR) spectroscopy led to the unequivocal identification of 6'-hydroxycatechinic acids (1a, 2a) and their radical states (1b, 2b), which were highlighted as main red chromophores. Six new dehydrocatechinic acid dimers (dehydrocatechinic acid-C-6'B/C-8D-(2 R,3 S)-catechin (3), dehydrocatechinic acid-C-6'B/C-6D-(2 R,3 S)-catechin (4, 5), dehydrocatechinic acid-C-6'B/C-8D-(2 R,3 R)-epicatechin (6), and dehydrocatechinic acid-C-6'B/C-6D-(2 R,3 R)-epicatechin (7, 8)) were also characterized as chromophores. 1-8 as well as their precursors were detected and quantified in alkalized cocoa powders via LC-MS/MS. With the increasing grade of alkalization, a decrease in catechin and epicatechin together with an increase in catechinic acid was observed. Compounds 1b, 2b, and 3-8 also showed a decrease in concentration by Dutching, which correlates to the accumulation of/to higher ordered chromophore oligomers and underlined the increase of the high molecular weight fraction. These findings give a first insight into the formation of structures causing the red coloring of cocoa, which offers the opportunity to optimize the alkalization process toward a better color design of cocoa powders.
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- 2019
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16. Applications of Innovative Lipidomic Methods for Blood Lipid Biomarkers
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Ken D. Stark
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Risk ,Docosahexaenoic Acids ,030309 nutrition & dietetics ,General Chemical Engineering ,Blood lipids ,Computational biology ,Biology ,Mass Spectrometry ,OMEGA-3 POLYUNSATURATED FATTY ACIDS ,03 medical and health sciences ,0404 agricultural biotechnology ,Pregnancy ,Fatty Acids, Omega-3 ,Lipidomics ,Humans ,Metabolomics ,chemistry.chemical_classification ,0303 health sciences ,Dietary intake ,Fatty Acids ,Fatty acid ,04 agricultural and veterinary sciences ,General Medicine ,General Chemistry ,Lipids ,040401 food science ,Diet ,Chronic disease ,chemistry ,Health ,Docosahexaenoic acid ,Blood biomarkers ,Chronic Disease ,Female ,Biomarkers - Abstract
Assessing dietary intake is critical for understanding the relationship between diet and health. Fatty acid blood biomarkers have been particularly useful in determining dietary intakes and assessing the risk of chronic disease. However, fatty acid analysis involves the removal of fatty acids from their complex lipid structures resulting in a loss of potentially useful biological information. "Lipidomics" involves the use of mass spectrometry to identify lipids in their native form. Lipidomic approaches present challenges as an alternative to fatty acid analysis. This includes different types of lipidomic approaches and a lack of consensus on the lipids reported in different studies. Distinguishing between macrolipidomic approaches to characterize highly abundant lipids and microlipidomic approaches examining low abundant bioactive lipids and the use of brutto, medio, genio, and infinio to describe the level of information of lipidomic data can provide clarity to the field. Using lipidomic measurements for understanding docosahexaenoic acid metabolism during pregnancy will also be examined.
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- 2019
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17. Effects of N‐oleoylethanolamide on Lymphoblasts Deficient in Tafazzin
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Germán Sciaini, Ken D. Stark, Juan J. Aristizabal-Henao, Ryan Bradley, Robin E. Duncan, John S. Y. Chan, and Mishi Groh
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medicine.medical_specialty ,biology ,Chemistry ,Lymphoblast ,Tafazzin ,Biochemistry ,Oleoylethanolamide ,chemistry.chemical_compound ,Endocrinology ,Internal medicine ,Genetics ,medicine ,biology.protein ,Molecular Biology ,Biotechnology - Published
- 2021
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18. Chronic toxicity of three neonicotinoid insecticides and their mixture on two daphniid species: Daphnia magna and Ceriodaphnia dubia
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Jenifer K. McIntyre, Chelsea J. Mitchell, John D. Stark, and Claire Duchet
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biology ,Daphnia magna ,Neonicotinoid ,Ceriodaphnia dubia ,Clothianidin ,biology.organism_classification ,Pesticide toxicity ,people.cause_of_death ,chemistry.chemical_compound ,chemistry ,Imidacloprid ,Environmental chemistry ,Thiamethoxam ,people ,Chronic toxicity - Abstract
Neonicotinoid insecticides represent nearly a quarter of the global market and are widely used in agriculture but also for lawn, garden care, and pest control. They are highly water-soluble, persistent in soil, and may enter the aquatic compartment via spray drift, runoff, or leaching, and contribute to downstream aquatic toxicity. Although insects appear to be the most sensitive group to neonicotinoids, other groups, such as crustaceans and birds, may also be affected. Furthermore, most studies focus on single-insecticide exposure and very little is known concerning the impact of neonicotinoid mixtures on aquatic invertebrates. The present study was designed to test potential toxicological effects of an environmentally relevant mixture of imidacloprid, clothianidin, and thiamethoxam on populations of Ceriodaphnia dubia and Daphnia magna under controlled conditions. Chronic toxicity tests were conducted in the laboratory, and survival and reproduction were measured for both species under exposure to nominal concentrations of imidacloprid (0.256 µg/L), clothianidin (3.11 µg/L), thiamethoxam (1.49 µg/L), and a mixture of the three compounds at the same concentrations of the individual compounds. The neonicotinoids did not affect the survival of C. dubia and D. magna founders. Reproduction of C. dubia was affected only by the mixture. All three individual insecticides as well as the mixture caused a significant reduction in the reproduction of D. magna. Our results highlight the complexity of pesticide toxicity and show that traditional toxicological approaches such as acute mortality studies, especially tests with single compounds, can underestimate negative impacts that occur in the environment.HighlightsNeonicotinoids are currently the most frequently used insecticides worldwide.An environmentally relevant mixture of three neonicotinoids was evaluated on two daphniid species.The mixture negatively affected the reproduction of C. dubia and Daphnia magna.Traditional toxicological approaches with single compounds may underestimate the effects occurring in the environment at low concentrations.
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- 2021
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19. Comprehensive structure-activity-relationship studies of sensory active compounds in licorice (Glycyrrhiza glabra)
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Rukiye Erkaya, Anne Brockhoff, Masha Y. Niv, Yaron Ben Shoshan-Galeczki, Thomas Hofmann, Maximilian Kranz, Wolfgang Meyerhof, Corinna Dawid, Timo D. Stark, and Christian Schmid
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Taste ,Phytochemicals ,Saponin ,Stimulation ,Sensory system ,01 natural sciences ,Analytical Chemistry ,chemistry.chemical_compound ,0404 agricultural biotechnology ,stomatognathic system ,Taste receptor ,Glycyrrhiza ,Structure–activity relationship ,Glycyrrhizin ,chemistry.chemical_classification ,biology ,Traditional medicine ,Plant Extracts ,010401 analytical chemistry ,04 agricultural and veterinary sciences ,General Medicine ,Saponins ,biology.organism_classification ,040401 food science ,Triterpenes ,ddc ,0104 chemical sciences ,chemistry ,Food Science - Abstract
Licorice saponins, the main constituents of Glycyrrhiza glabra L. roots, are highly appreciated by the consumer for their pleasant sweet and long lasting licorice taste. The objective of the present study was to understand the molecular features that contribute to bitter, sweet and licorice sensation of licorice roots, and whether individual compounds elicit more than one of these sensations. Therefore, a sensomics approach was conducted, followed by purification of the compounds with highest sensory impact, and by synthesis as well as full characterization via HRESIMS, ESIMS/MS and 1D/2D-NMR experiments. This led to the discovery and structure determination of 28 sweet, bitter and licorice tasting key phytochemicals, including two unknown compounds. A combination of sensorial, cell-based and computational analysis revealed distinct structural features, such as spatial arrangement of functional groups in the triterpenoid E-ring, driving to different taste sensations and sweet receptor hTAS1R2/R3 stimulation.
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- 2021
20. Detection and Isolation of Emetic Bacillus cereus Toxin Cereulide by Reversed Phase Chromatography
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Eva Maria Kalbhenn, Gregor Grass, Mandy Knüpfer, Monika Ehling-Schulz, Tobias Bauer, and Timo D. Stark
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Vomiting ,Health, Toxicology and Mutagenesis ,peptide quantification ,Bacillus cereus ,lcsh:Medicine ,Toxicology ,Tandem mass spectrometry ,medicine.disease_cause ,Mass spectrometry ,Foodborne Diseases ,03 medical and health sciences ,chemistry.chemical_compound ,cereulide ,reversed phase chromatography (RPC), Äkta™ pure ,Depsipeptides ,medicine ,Humans ,Gram-Positive Bacterial Infections ,030304 developmental biology ,Chromatography, Reverse-Phase ,0303 health sciences ,Chromatography ,biology ,030306 microbiology ,Toxin ,Communication ,lcsh:R ,emetic Bacillus cereus ,Reproducibility of Results ,Cereulide ,Reversed-phase chromatography ,biology.organism_classification ,Isolation (microbiology) ,Äkta™ pure ,reversed phase chromatography (RPC) ,Cereus ,chemistry ,toxin purification - Abstract
The emetic toxin cereulide is a 1.2 kDa dodecadepsipeptide produced by the food pathogen Bacillus cereus. As cereulide poses a serious health risk to humans, sensitive and specific detection, as well as toxin purification and quantification, methods are of utmost importance. Recently, a stable isotope dilution assay tandem mass spectrometry (SIDA–MS/MS)-based method has been described, and an method for the quantitation of cereulide in foods was established by the International Organization for Standardization (ISO). However, although this SIDA–MS/MS method is highly accurate, the sophisticated high-end MS equipment required for such measurements limits the method’s suitability for microbiological and molecular research. Thus, we aimed to develop a method for cereulide toxin detection and isolation using equipment commonly available in microbiological and biochemical research laboratories. Reproducible detection and relative quantification of cereulide was achieved, employing reversed phase chromatography (RPC). Chromatographic signals were cross validated by ultraperformance liquid chromatography–mass spectrometry (UPLC–MS/MS). The specificity of the RPC method was tested using a test panel of strains that included non-emetic representatives of the B. cereus group, emetic B. cereus strains, and cereulide-deficient isogenic mutants. In summary, the new method represents a robust, economical, and easily accessible research tool that complements existing diagnostics for the detection and quantification of cereulide.
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- 2021
21. Fast and Sensitive LC-MS/MS Method for the Quantitation of Saponins in Various Sugar Beet Materials
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Timo D. Stark, Jochen Weiss, Hanna Salminen, Corinna Dawid, Thomas Hofmann, Matthias Edelmann, and Theo Ralla
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Saponin ,Context (language use) ,Plant Roots ,chemistry.chemical_compound ,Triterpene ,Tandem Mass Spectrometry ,Lc ms ms ,Food science ,Glycosides ,Sugar ,Chromatography, High Pressure Liquid ,chemistry.chemical_classification ,biology ,Molecular Structure ,Plant Extracts ,General Chemistry ,Saponins ,biology.organism_classification ,Triterpenes ,Plant Leaves ,chemistry ,Ginsenoside ,Sugar beet ,Beta vulgaris ,General Agricultural and Biological Sciences ,Quantitative analysis (chemistry) - Abstract
An LC-MS/MS method was developed for the simultaneous quantitative analysis of the following 11 triterpene saponins within different sugar beet materials and plant compartments: betavulgaroside I (1), betavulgaroside II (2), betavulgaroside III (3), betavulgaroside IV (4), betavulgaroside VIII (5), boussingoside A2 (6), 3-O-[β-d-glucopyranosyl-(1 → 2)-(β-d-xylopyranosyl-(1 → 3))-β-d-glucuronopyranosyl]-28-O-β-d-glucopyranosyl-3β-hydroxyolean-12-en-28-oic acid (7), betavulgaroside V (8), chikusetsusaponin IVa (9), calenduloside E (10), and ginsenoside R0 (11). Our results showed highly varying amounts of saponins within different varieties, roots, and leaves as well as different plant compartments. The amounts for sugar beet roots were in the range of 862 mg/kg to 2 452 mg/kg. They were mostly higher for leaves compared to roots of the same variety with amounts ranging from 907 mg/kg to 5 398 mg/kg. Furthermore, the occurrence of sugar beet saponins within different side streams was examined; in this context, sugar beet fiber contained the highest amounts of saponins for all investigated plant constituents and byproduct streams with a total amount of 12.7 g/kg. Finally, this is the first publication about the occurrence of individual saponins in sugar beets.
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- 2020
22. Engineering of benzoxazinoid biosynthesis in Arabidopsis thaliana: Metabolic and physiological challenges
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Tobias Lanzl, Stefan Lenk, Corinna Dawid, Chris-Carolin Schön, Thomas Hoffmann, Wilfried Schwab, Linlin Zheng, Richard Hammerl, Monika Frey, Timo D. Stark, Alfons Gierl, and Aleksej Abramov
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Glycosylation ,biology ,Metabolite ,Arabidopsis ,food and beverages ,Plant Science ,General Medicine ,Horticulture ,biology.organism_classification ,Poaceae ,Biochemistry ,Zea mays ,Benzoxazines ,ddc ,Hydroxylation ,chemistry.chemical_compound ,chemistry ,Biosynthesis ,Arabidopsis thaliana ,Molecular Biology ,Flux (metabolism) ,Salicylic acid ,Triticum - Abstract
Plant specialised metabolites constitute a layer of chemical defence. Classes of the defence compounds are often restricted to a certain taxon of plants, e.g. benzoxazinoids (BX) are characteristically detected in grasses. BXs confer wide-range defence by controlling herbivores and microbial pathogens and are allelopathic compounds. In the crops maize, wheat and rye high concentrations of BXs are synthesised at an early developmental stage. By transfer of six Bx-genes (Bx1 to Bx5 and Bx8) it was possible to establish the biosynthesis of 2,4-dihydroxy-1,4-benzoxazin-3-one glucoside (GDIBOA) in a concentration of up to 143 nmol/g dry weight in Arabidopsis thaliana. Our results indicate that inefficient channeling of substrates along the pathway and metabolisation of intermediates in host plants might be a general drawback for transgenic establishment of specialised metabolite biosynthesis pathways. As a consequence, BX levels required for defence are not obtained in Arabidopsis. We could show that indolin-2-one (ION), the first specific intermediate, is phytotoxic and is metabolised by hydroxylation and glycosylation by a wide spectrum of plants. In Arabidopsis, metabolic stress due to the enrichment of ION leads to elevated levels of salicylic acid (SA) and in addition to its intrinsic phytotoxicity, ION affects plant morphology indirectly via SA. We could show that Bx3 has a crucial role in the evolution of the pathway, first based on its impact on flux into the pathway and, second by C3-hydroxylation of the phytotoxic ION. Thereby BX3 interferes with a supposedly generic detoxification system towards the non-specific intermediate.
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- 2020
23. Population viability in a host-parasitoid system is mediated by interactions between population stage structure and life stage differential susceptibility to toxicants
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Jenifer K. McIntyre, John E. Banks, and John D. Stark
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0106 biological sciences ,0301 basic medicine ,Insecticides ,Population Dynamics ,Population ,Zoology ,Brassica ,010603 evolutionary biology ,01 natural sciences ,Article ,Host-Parasite Interactions ,Parasitoid ,Environmental impact ,Neonicotinoids ,03 medical and health sciences ,chemistry.chemical_compound ,Animals ,education ,Organism ,education.field_of_study ,Multidisciplinary ,Ecology ,biology ,Host (biology) ,Diaeretiella rapae ,Nitro Compounds ,biology.organism_classification ,030104 developmental biology ,Brevicoryne brassicae ,chemistry ,Polydnaviridae ,Larva ,Toxicity ,Toxicant - Abstract
The effects of toxicants, such as pesticides, may be more severe for some life stages of an organism than others. However, in most toxicity studies, data is developed for only one life stage, which may lead to misleading interpretations. Furthermore, population stage-structure may interact with differential susceptibility, especially when populations consist of higher proportions of individuals in more susceptible stages at the time of toxicant exposure. We explore the interaction of differential stage susceptibility and stage distribution using a stage-structured Lefkovitch matrix model. We incorporate lab-derived toxicity data for a common parasitoid, the braconid Diaeretiella rapae (M’Intosh), a common natural enemy of the cabbage aphid (Brevicoryne brassicae L.), exposed to the pesticide imidacloprid. We compare population outcomes of simulations in which we vary both the population stage structure along with the susceptibility of each stage to toxicants. Our results illustrate an interaction between differential susceptibility and initial stage distribution, highlighting the fact that both of these demographic features should be considered in interpreting toxicity data and the development of ecological risk assessments.
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- 2020
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24. SDSS-IV MaNGA: the nature of an off-galaxy Hα blob: a multiwavelength view of offset cooling in a merging galaxy group
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Francesco Belfiore, Chien-Hsiu Lee, Joseph D. Gelfand, Dmitry Bizyaev, Stephen Gwyn, Diana M Worrall, Kevin Bundy, Matt Bothwell, David R. Law, José G. Fernández-Trincado, Sebastián F. Sánchez, Michał J. Michałowski, Lihwai Lin, Sébastien Peirani, Cheng Li, Hai Fu, Bau-Ching Hsieh, Alexei Moiseev, Ewan O'Sullivan, Song Huang, D. Stark, Hsi-An Pan, D. V. Oparin, Observatoire de la Côte d'Azur (OCA), and Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)
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cooling flows ,galaxy groups (597) ,Brightness ,Active galactic nucleus ,Offset (computer science) ,010504 meteorology & atmospheric sciences ,Astrophysics::High Energy Astrophysical Phenomena ,Astrophysics ,Astrophysics::Cosmology and Extragalactic Astrophysics ,01 natural sciences ,chemistry.chemical_compound ,symbols.namesake ,Galaxy group ,0103 physical sciences ,Compounds of carbon ,010303 astronomy & astrophysics ,ComputingMilieux_MISCELLANEOUS ,Astrophysics::Galaxy Astrophysics ,0105 earth and related environmental sciences ,Physics ,chemistry.chemical_classification ,cooling flows (2028) ,galaxy groups ,galaxy interactions ,Balmer series ,Astronomy and Astrophysics ,Astrophysics - Astrophysics of Galaxies ,Galaxy ,chemistry ,13. Climate action ,Space and Planetary Science ,[SDU]Sciences of the Universe [physics] ,active galactic nuclei ,symbols ,galaxy interactions (600) ,Carbon monoxide ,active galactic nuclei (16) - Abstract
Galaxies in dense environments, such as groups and clusters, experience various processes by which galaxies gain and lose gas. Using data from the SDSS-IV MaNGA survey, we previously reported the discovery of a giant (6 -- 8 kpc in diameter) H$\alpha$ blob, Totoro, about 8 kpc away from a pair of galaxies (Satsuki and Mei) residing in a galaxy group which is experiencing a group-group merger. Here, we combine interferometric $^{12}$CO(1--0) molecular gas data, new wide-field H$\alpha$, $u$-band data, and published X-ray data to determine the origin of the blob. Several scenarios are discussed to account for its multi-wavelength properties, including (1) H$\alpha$ gas being stripped from galaxy Satsuki by ram-pressure; (2) a separated low-surface-brightness galaxy; (3) gas being ejected or ionized by an active galactic nucleus (AGN); and (4) a cooling intra-group medium (IGM). Scenarios (1) and (2) are less favored by the present data. Scenario (3) is also less likely as there is no evidence for an active ongoing AGN in the host galaxy. We find that the CO (cold) and H$\alpha$ (warm) gas coexist with X-ray (hot) structures; moreover, the derived cooling time is within the regime where molecular and H$\alpha$ gas are expected. The coexistence of gas with different temperatures also agrees with that of cooling gas in other systems. Our multi-wavelength results strongly suggest that the CO and H$\alpha$ gas are the product of cooling from the IGM at its current location, i.e., cooling has occurred, and may be ongoing, well outside the host-galaxy core., Comment: 23 pages, 10 figures, Accepted for publication in ApJ
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- 2020
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25. Evaluation of MALDI-ToF Mass Spectrometry for Rapid Detection of Cereulide From Bacillus cereus Cultures
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Monika Ehling-Schulz, Andy Schneider, Peter Lasch, Timo D. Stark, and Joerg Doellinger
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MALDI-ToF ,Microbiology (medical) ,Chromatography ,High prevalence ,Food poisoning ,biology ,lcsh:QR1-502 ,Bacillus cereus ,Cereulide ,biology.organism_classification ,MALDI-TOF Mass Spectrometry ,medicine.disease ,Microbiology ,Rapid detection ,lcsh:Microbiology ,cereulide ,chemistry.chemical_compound ,chemistry ,Cereus ,B. cereus ,toxin detection ,medicine ,Extraction methods ,mass spectrometry - Abstract
1.AbstractBacillus cereus plays an often unrecognized role in food borne diseases. Food poisoning caused by this pathogen is manifested by either diarrhea or emesis. While different enterotoxins have been linked to the diarrheal type of B. cereus infections, the emetic toxin cereulide is responsible for the second type. Due to the relatively high prevalence of cereulide associated food poisoning, methods for simple and reliable detection of cereulide producing strains are of utmost importance. Currently, liquid-chromatography coupled to mass spectrometry (LC-MS) is used for sensitive, specific and quantitative cereulide detection, but this technique requires specialized LC-MS equipment, which is often not available in microbiology routine diagnostic laboratories.The last decade has witnessed the advent of matrix-assisted laser desorption/ionization-time-of-flight mass spectrometry (MALDI-ToF MS) as a simple, rapid and cost-efficient technique for identification of microbial pathogens in routine diagnostics. Just recently, two different studies reported on the application of MALDI-ToF MS for either the differentiation of emetic and non-emetic strains of B. cereus or for direct detection of cereulide from bacterial colony smears. However, no method evaluation and optimization was performed in frame of these studies. Thus, additional investigations on the selectivity and sensitivity of MALDI-TOF MS for cereulide detection are needed before implementation of this method in routine diagnostics can be considered. These aspects prompted us to investigate open or controversial issues and to systematically test sample preparation methods, commonly used for microbial identification for their suitability to detect the emetic toxin directly from bacteria.Based on our experimental findings we propose a MALDI-ToF MS workflow that allows identification of B. cereus and sensitive detection of cereulide in parallel, using standard, linear-mode MALDI-ToF MS equipment. The experimental protocol is based on the well-established ethanol/formic acid extraction method and offers, if required, possibilities for further characterization by more sophisticated LC-MS-based methods. In summary, the ease of use and the achieved level of analytical sensitivity as well as the wide-spread availability of standard MALDI-ToF MS equipment in clinical microbiological laboratories provides a promising tool to improve and to facilitate routine diagnostics of B. cereus associated food intoxications.
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- 2020
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26. Whole-blood PUFA and associations with markers of nutritional and health status in acutely malnourished children in Cambodia
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Nheb Angkeabos, Nanna Roos, Sanne Sigh, Duch Moniboth, Arnaud Laillou, Jacques Berger, Frank T Wieringa, Lotte Lauritzen, Ken D. Stark, and Chhoun Chamnan
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Male ,Adolescent ,Linoleic acid ,Health Status ,Medicine (miscellaneous) ,Physiology ,Nutritional Status ,Child Nutrition Disorders ,Body Mass Index ,chemistry.chemical_compound ,Nutritional status ,Mead acid ,Blood cell counts ,Acutely malnourished children ,Fatty Acids, Omega-6 ,Fatty Acids, Omega-3 ,Medicine ,Humans ,Child ,Wasting ,Growth Disorders ,Whole blood ,Inflammation ,chemistry.chemical_classification ,Nutrition and Dietetics ,Anthropometry ,business.industry ,Wasting Syndrome ,Public Health, Environmental and Occupational Health ,food and beverages ,Infant ,medicine.disease ,eye diseases ,Malnutrition ,Cross-Sectional Studies ,chemistry ,Child, Preschool ,lipids (amino acids, peptides, and proteins) ,Arachidonic acid ,Female ,Docosapentaenoic acid ,medicine.symptom ,business ,Cambodia ,PUFA ,Polyunsaturated fatty acid ,Research Paper - Abstract
Objective:To measure fatty acid composition, particularly whole-blood PUFA content, in acutely malnourished children and identify associations with markers of nutritional and health status.Design:PUFA were assessed in dried blood spots obtained from a cross-sectional study. Nutritional and health status were assessed by anthropometry, haemoglobinopathies, inflammation and blood counts.Setting:Cambodia.Participants:The study was conducted with 174 children aged 0·5–18 years with acute malnutrition.Results:Among total fatty acids (FA), the relative percentage of total PUFA was 20 % FA, with 14 % of the children having very low PUFA (mead acid (MA):arachidonic acid (AA) >0·02,n-6 docosapentaenoic acid:DHA >0·2 and totaln-6:n-3 PUFA >10·5). Wasting was not associated with any PUFA. Stunting and low height were consistently positively associated with total PUFA and positively withn-6 PUFA. Height was positively associated withn-3 long-chain PUFA (LCPUFA). The presence of haemoglobinopathies or inflammation was positively associated with MA:AA, but not total PUFA. Elevated blood platelet counts were positively correlated with linoleic acid and appeared to be influenced by anaemia (P= 0·010) and inflammation (P= 0·002). Monocyte counts were high during inflammation (P= 0·052) and correlated positively withn-6 LCPUFA andn-3 LCPUFA.Conclusions:Children with acute malnutrition or stunting had low PUFA, while elevated platelets and monocytes were associated with high PUFA. In acutely malnourished children, inflammation could lead to elevated blood cell counts resulting in increased whole-blood PUFA which does not reflect dietary intake or nutritional status.
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- 2020
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27. One Way Traffic: Base‐to‐backbone Hole Transfer in Nucleoside Phosphorodithioates
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Roman Dembinski, Sergey A. Denisov, Renata Kaczmarek, Alexander D. Stark, Amitava Adhikary, Michael D. Sevilla, Taisiya Jacobs, Samuel Ward, Pascal Pernot, Anil Kumar, Mehran Mostafavi, Viacheslav Shcherbakov, Dipra Debnath, Dariusz Korczyński, Department of Bioorganic Chemistry Centre of Molecular and Macromolecular Studies Polish Academy of Sciences, Polish Academy of Sciences (PAN), Oakland University, Institut de Chimie Physique (ICP), and Institut de Chimie du CNRS (INC)-Université Paris-Saclay-Centre National de la Recherche Scientifique (CNRS)
- Subjects
Anions ,Guanine ,Radical ,Dimer ,Radiation chemistry ,010402 general chemistry ,01 natural sciences ,Article ,Catalysis ,Phosphates ,chemistry.chemical_compound ,thiyl radicals ,base-to-backbone hole transfer ,backbone-to-base hole transfer ,Spectroscopy ,Phosphorodithioate ,Aqueous solution ,010405 organic chemistry ,Organic Chemistry ,Electron Spin Resonance Spectroscopy ,Water ,Nucleosides ,DNA ,General Chemistry ,guanine cation radical ,3. Good health ,0104 chemical sciences ,[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry ,Crystallography ,chemistry ,Radiolysis ,Density functional theory ,Ionization energy ,Pulse Radiolysis ,Oxidation-Reduction - Abstract
The directionality of the hole-transfer processes between DNA backbone and base was investigated by using phosphorodithioate [P(S- )=S] components. ESR spectroscopy in homogeneous frozen aqueous solutions and pulse radiolysis in aqueous solution at ambient temperature confirmed initial formation of G.+ -P(S- )=S. The ionization potential of G-P(S- )=S was calculated to be slightly lower than that of guanine in 5'-dGMP. Subsequent thermally activated hole transfer from G.+ to P(S- )=S led to dithiyl radical (P-2S. ) formation on the μs timescale. In parallel, ESR spectroscopy, pulse radiolysis, and density functional theory (DFT) calculations confirmed P-2S. formation in an abasic phosphorodithioate model compound. ESR investigations at low temperatures and higher G-P(S- )=S concentrations showed a bimolecular conversion of P-2S. to the σ2 -σ*1 -bonded dimer anion radical [-P-2S - . 2S-P-]- [ΔG (150 K, DFT)=-7.2 kcal mol-1 ]. However, [-P-2S - . 2S-P-]- formation was not observed by pulse radiolysis [ΔG° (298 K, DFT)=-1.4 kcal mol-1 ]. Neither P-2S. nor [-P-2S - . 2S-P-]- oxidized guanine base; only base-to-backbone hole transfer occurs in phosphorodithioate.
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- 2020
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28. The trouble with surrogates in environmental risk assessment: a daphniid case study
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John D. Stark, Amy Veprauskas, John E. Banks, and Azmy S. Ackleh
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0106 biological sciences ,Health, Toxicology and Mutagenesis ,Longevity ,010501 environmental sciences ,Management, Monitoring, Policy and Law ,Toxicology ,Models, Biological ,01 natural sciences ,chemistry.chemical_compound ,Species Specificity ,Survivorship curve ,Toxicity Tests ,Animals ,Daphniidae ,Life History Traits ,0105 earth and related environmental sciences ,Ecosystem health ,biology ,Ecology ,General Medicine ,Cladocera ,biology.organism_classification ,010602 entomology ,Fertility ,Population model ,chemistry ,Indicator species ,Risk assessment ,Toxicant - Abstract
The use of indicator species to test for environmental stability and functioning is a widespread practice. In aquatic systems, several daphniids (Cladocera: Daphniidae) are commonly used as indicator species; registration of new pesticides are mandated by the Environmental Protection Agency to be accompanied by daphniid toxicity data. This reliance upon a few species to infer ecosystem health and function assumes similar responses to toxicants across species with potentially very different life histories and susceptibility. Incorporating lab-derived life-history data into a simple mathematical model, we explore the reliability of three different daphniid species as surrogates for each other by comparing their responses to reductions in survivorship and fecundity after simulated exposure to toxicants. Our results demonstrate that daphniid species' responses to toxicant exposure render them poor surrogates for one another, highlighting that caution should be exercised in using a surrogate approach to the use of indicator species in risk assessment.
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- 2018
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29. Construction and Application of a Database for a Five-Dimensional Identification of Natural Compounds in Garcinia Species by Means of UPLC-ESI-TWIMS-TOF-MS: Introducing Gas Phase Polyphenol Conformer Drift Time Distribution Intensity Ratios
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Sofie Stark, Onesmo B. Balemba, Patrick Weiss, Josef Ranner, Timo D. Stark, Benedikt Stiglbauer, and Thomas Hofmann
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0106 biological sciences ,Spectrometry, Mass, Electrospray Ionization ,computer.software_genre ,01 natural sciences ,High-performance liquid chromatography ,Gas phase ,Garcinia ,Conformational isomerism ,biology ,Database ,Plant Extracts ,Hydrogen bond ,Chemistry ,010401 analytical chemistry ,Polyphenols ,General Chemistry ,biology.organism_classification ,Intensity ratio ,0104 chemical sciences ,Polyphenol ,Time-of-flight mass spectrometry ,General Agricultural and Biological Sciences ,computer ,Databases, Chemical ,010606 plant biology & botany - Abstract
Thirty-four reference compounds from G. buchananii were analyzed by means of UPLC-ESI-IMS-TOF-MS to build a database consisting of retention time, accurate m/ z of precursors and fragment ions, and rotationally averaged collision cross-sectional area (CCS). The CCS value of six selected compounds analyzed in bark extract in different concentrations and solvent systems showed excellent intra- and interday precision (RSD ≤ 0.9%). The established database was applied on different organs of G. buchananii as well as G. kola, G. mangostana, and G. cambogia enabling a fast and reliable identification of these natural bioactives. For several compounds, more than one drift time species could be highlighted, which we propose to be hydrogen bond stabilized rotational isomers transferred from solution to gas phase. We used all CCS values of one compound, and we propose to add also the intensity ratio of the conformers as a new and additional characteristic compound parameter in compound identification/screening/database applications to reduce dereplication and false positives and to strengthen the identification.
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- 2018
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30. Best practices for the design, laboratory analysis, and reporting of trials involving fatty acids
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Mélanie Plourde, Ken D. Stark, Peter B. Jones, J. Thomas Brenna, and Yu Hong Lin
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Quality Control ,0301 basic medicine ,Research design ,experimental design ,Erythrocytes ,response factors ,gas chromatography ,Best practice ,Medicine (miscellaneous) ,Clinical nutrition ,03 medical and health sciences ,systematic review ,Environmental health ,Humans ,Medicine ,protocol ,fatty acid methyl esters ,Phospholipids ,Randomized Controlled Trials as Topic ,Protocol (science) ,chemistry.chemical_classification ,030109 nutrition & dietetics ,Nutrition and Dietetics ,sample preparation ,business.industry ,Fatty Acids ,Reproducibility of Results ,Fatty acid ,Lipids ,Checklist ,Intention to Treat Analysis ,meta-analysis ,Systematic review ,chemistry ,Research Design ,Meta-analysis ,placebo ,Narrative Review ,Laboratories ,business - Abstract
Fatty acids are among the most studied nutrients in human metabolism and health. Endogenous fatty acid status influences health and disease via multiple mechanisms at all stages of the life cycle. Despite widespread interest, attempts to summarize the results of multiple studies addressing similar fatty acid–related outcomes via meta-analyses and systematic reviews have been disappointing, largely because of heterogeneity in study design, sampling, and laboratory and data analyses. Our purpose is to recommend best practices for fatty acid clinical nutrition and medical studies. Key issues in study design include judicious choice of sampled endogenous pools for fatty acid analysis, considering relevant physiologic state, duration of intervention and/or observation, consideration of specific fatty acid dynamics to link intake and endogenous concentrations, and interpretation of results with respect to known fatty acid ranges. Key laboratory considerations include proper sample storage, use of sample preparation methods known to be fit-for-purpose via published validation studies, detailed reporting or methods to establish proper fatty acid identification, and quantitative analysis, including calibration of differential response, quality control procedures, and reporting of data on a minimal set of fatty acids to enable comprehensive interpretation. We present a checklist of recommendations for fatty acid best practices to facilitate design, review, and evaluation of studies with the intention of improving study reproducibility.
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- 2018
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31. Targeted screening and quantitative analyses of antioxidant compounds in aged-garlic extract
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Thomas Hofmann, Toshiaki Matsutomo, and Timo D. Stark
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Antioxidant ,Chromatography ,medicine.medical_treatment ,Potential candidate ,Alcohol ,Ether ,04 agricultural and veterinary sciences ,General Chemistry ,040401 food science ,Biochemistry ,Stable isotope dilution ,Industrial and Manufacturing Engineering ,chemistry.chemical_compound ,0404 agricultural biotechnology ,chemistry ,medicine ,Targeted screening ,Quantitative analysis (chemistry) ,Food Science ,Biotechnology - Abstract
Previous studies suggest the existence of unidentified antioxidants in aged garlic extract (AGE), which are responsible for the potent antioxidant property of the whole AGE. Therefore, potential candidate antioxidants were synthesized followed by a targeted LC–MS/MS screening, resulting in the identification of 18 compounds in AGE. Several hits showed antioxidant activity comparable to the reference compounds. Subsequently, all the identified compounds were quantitated by means of a stable isotope dilution assay or external standard calibration in combination with LC–MS/MS. From the results of the antioxidant assays and quantitative analysis, (–)-(2R,3S)-dihydrodehydrodiconiferyl alcohol (1), (+)-(2S,3R)-dehydrodiconiferyl alcohol (2), threo-guaiacylglycerol-β-O-4′-coniferyl ether (4), N-trans-feruloyltyramine (14), and N-trans-coumaroyltyramine (16) as well as S-allyl-l-cysteine were highlighted to be the major antioxidants in AGE.
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- 2018
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32. Analytical Method To Detect and Quantify Avocatin B in Hass Avocado Seed and Pulp Matter
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Ken D. Stark, Juan J. Aristizabal Henao, Paul A. Spagnuolo, Nawaz Ahmed, and Richard W. Smith
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0301 basic medicine ,Accuracy and precision ,Coefficient of variation ,Hass avocado ,Pharmaceutical Science ,engineering.material ,Lower limit ,Analytical Chemistry ,03 medical and health sciences ,0302 clinical medicine ,Tandem Mass Spectrometry ,Drug Discovery ,Pharmacology ,Chromatography ,biology ,Persea ,Plant Extracts ,Chemistry ,Pulp (paper) ,Organic Chemistry ,food and beverages ,biology.organism_classification ,3. Good health ,030104 developmental biology ,Complementary and alternative medicine ,Fruit ,030220 oncology & carcinogenesis ,Seeds ,engineering ,Molecular Medicine ,Chromatography, Liquid - Abstract
Avocatin B, an avocado-derived compound mixture, was demonstrated recently to possess potent anticancer activity by selectively targeting and eliminating leukemia stem cells. Avocatin B is a mixture of avocadene and avocadyne, two 17-carbon polyhydroxylated fatty alcohols (PFAs), first discovered in avocado seeds; their quantities in avocado pulp are unknown. Analytical methods to detect avocado seed PFAs have utilized NMR spectroscopy and GC-MS; both of these lack quantitative capacity and accuracy. Herein, we report a sensitive LC-MS method for the quantitation of avocadene and avocadyne in avocado seed and pulp. The method has a reliable and linear response range of 0.1–50 μM (0.03–17.2 ng/μL) for both avocadene and avocadyne (r2 > 0.990) with a lower limit of quantitation (LLOQ) of 0.1 μM. The intra- and interassay accuracy and precision of the quality control (QC) samples at LLOQ showed ≤18.2% percentage error and ≤14.4% coefficient of variation (CV). The intra- and interassay accuracy and precision ...
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- 2018
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33. The evolution of toxicant resistance in daphniids and its role on surrogate species
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John E. Banks, Amy Veprauskas, John D. Stark, and Azmy S. Ackleh
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0301 basic medicine ,Population Dynamics ,Population ,Evolutionary game theory ,Leslie matrix ,010501 environmental sciences ,Biology ,Models, Biological ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,Animals ,education ,Ecology, Evolution, Behavior and Systematics ,0105 earth and related environmental sciences ,education.field_of_study ,Resistance (ecology) ,Biological Evolution ,Long term persistence ,Prolonged exposure ,030104 developmental biology ,Daphnia ,Disturbance (ecology) ,chemistry ,Evolutionary biology ,Toxicant - Abstract
Prolonged exposure to a disturbance such as a toxicant has the potential to result in rapid evolution to toxicant resistance in many short-lived species such as daphniids. This evolution may allow a population to persist at higher levels of the toxicant than is possible without evolution. Here we apply evolutionary game theory to a Leslie matrix model for a daphniid population to obtain a Darwinian model that couples population dynamics with the dynamics of an evolving trait. We use the Darwinian model to consider how the evolution of resistance to the lethal or sublethal effects of a disturbance may change the population dynamics. In particular, we determine the conditions under which a daphniid population can persist by evolving toxicant resistance. We then consider the implications of this evolution in terms of the use of daphniids as surrogate species. We show for three species of daphniids that evolution of toxicant resistance means that one species may persist while another does not. These results suggest that toxicant studies that do not consider the potential of a species (or its surrogate) to develop toxicant resistance may not accurately predict the long term persistence of the species.
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- 2018
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34. PEMT, Δ6 desaturase, and palmitoyldocosahexaenoyl phosphatidylcholine are increased in rats during pregnancy[S]
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Daniel Chalil, David M. Mutch, Jason L. Elzinga, Juan J. Aristizabal Henao, Alan Chalil, Kristin A. Marks, Ken D. Stark, Daniel M.E. Lamontagne-Kam, Flavia Badoud, and Alex P. Kitson
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0301 basic medicine ,medicine.medical_specialty ,genetic structures ,FADS2 ,Phosphatidylethanolamine N-Methyltransferase ,QD415-436 ,Linoleoyl-CoA Desaturase ,fatty acids ,Biochemistry ,Rats, Sprague-Dawley ,03 medical and health sciences ,chemistry.chemical_compound ,Endocrinology ,Pregnancy ,Internal medicine ,Phosphatidylcholine ,tandem mass spectrometry ,medicine ,Animals ,Research Articles ,phospholipids ,nutrition/lipids ,2. Zero hunger ,chemistry.chemical_classification ,Fetus ,omega-3 fatty acids ,Chemistry ,Fatty acid ,food and beverages ,Cell Biology ,Metabolism ,medicine.disease ,3. Good health ,Rats ,030104 developmental biology ,Phosphatidylethanolamine N-methyltransferase ,Phosphatidylcholines ,Female ,lipids (amino acids, peptides, and proteins) ,microarray ,Polyunsaturated fatty acid - Abstract
DHA is important for fetal neurodevelopment. During pregnancy, maternal plasma DHA increases, but the mechanism is not fully understood. Using rats fed a fixed-formula diet (DHA as 0.07% total energy), plasma and liver were collected for fatty acid profiling before pregnancy, at 15 and 20 days of pregnancy, and 7 days postpartum. Phosphatidylethanolamine methyltransferase (PEMT) and enzymes involved in PUFA synthesis were examined in liver. Ad hoc transcriptomic and lipidomic analyses were also performed. With pregnancy, DHA increased in liver and plasma lipids, with a large increase in plasma DHA between day 15 and day 20 that was mainly attributed to an increase in 16:0/DHA phosphatidylcholine (PC) in liver (2.6-fold) and plasma (3.9-fold). Increased protein levels of Δ6 desaturase (FADS2) and PEMT at day 20 and increased Pemt expression and PEMT activity at day 15 suggest that during pregnancy, both DHA synthesis and 16:0/DHA PC synthesis are upregulated. Transcriptomic analysis revealed minor changes in the expression of genes related to phospholipid synthesis, but little insight on DHA metabolism. Hepatic PEMT appears to be the mechanism for increased plasma 16:0/DHA PC, which is supported by increased DHA biosynthesis based on increased FADS2 protein levels.
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- 2018
35. Evidence of multiple hepatic mechanisms to mobilize docosahexaenoic acid into dam plasma during pregnancy in chow-fed sprague dawley rats
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Alan Chalil, Dan Chalil, Ken D. Stark, and Juan J. Aristizabal-Henao
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0301 basic medicine ,medicine.medical_specialty ,Docosahexaenoic Acids ,Clinical Biochemistry ,030209 endocrinology & metabolism ,Glycerophospholipids ,Diglycerides ,Rats, Sprague-Dawley ,03 medical and health sciences ,chemistry.chemical_compound ,Fetus ,0302 clinical medicine ,Pregnancy ,Phosphatidylcholine ,Internal medicine ,Lipidomics ,medicine ,Animals ,RNA, Messenger ,030109 nutrition & dietetics ,Phosphatidylethanolamines ,Tumor Suppressor Proteins ,1-Acylglycerophosphocholine O-Acyltransferase ,Brain ,Cell Biology ,Metabolism ,medicine.disease ,Phospholipases A2 ,Endocrinology ,Liver ,chemistry ,Phospholipases ,Docosahexaenoic acid ,Acyltransferase ,Phospholipases A2, Calcium-Independent ,Phosphatidylcholines ,Female ,Acyltransferases ,Metabolic Networks and Pathways ,Lipoprotein - Abstract
Fetal brain growth requires considerable amounts of docosahexaenoic acid (DHA) during late pregnancy that is associated with increased maternal/dam plasma levels of PC 16:0_22:6 (palmitoyl docosahexaenoyl phosphatidylcholine). While biosynthesis of DHA during pregnancy is upregulated, the mechanisms responsible for the incorporation of dam DHA into PC 16:0_22:6 are not understood. The present study used a discovery approach combining untargeted lipidomics of plasma and liver (n = 3/group) with semi-targeted qPCR of hepatic gene products (n = 6/group) to identify metabolic pathways related to DHA metabolism, with a hypothesis that an upregulated acyltransferase involved in PC remodeling would be identified. Sprague Dawley rats were fed a commercial rodent chow throughout the study and samples were collected before pregnancy (baseline), at 15 and 20 days of pregnancy, and 7 days postpartum. Plasma and hepatic PC 16:0_22:6 was significantly increased (by 79% and 194%, respectively) at day 20 of pregnancy. An increase in hepatic DG (diacylglycerol) 16:0_22:6 (by 243%) and significant decreases in Pla2G15 (0.4-fold) and Pla2G16 (0.6-fold) at day 20 of pregnancy, no changes in Lpcat1–4, and an abundant pool of hepatic pool PE (phosphatidylethanolamine) 16:0_22:6 suggest that plasma PC 16:0_22:6 is not being produced by fatty acyl remodeling during pregnancy. The increase in plasma PC 16:0_22:6 during pregnancy appears to be due to an increase in de novo synthesis of PC and both the CDP-choline and phosphatidylcholine methyltransferase pathways are implicated. There was also evidence suggesting channeling of DHA into PC and lipoprotein assembly may be occurring. Targeted research is necessary to confirm these findings, but the results of this study indicate metabolic adaptions to enable maternal/dam resiliency towards meeting the fetal/pup demand for DHA during pregnancy.
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- 2021
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36. Higher intake of fish and fat is associated with lower plasma s -adenosylhomocysteine: a cross-sectional study
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Torben Hansen, Ken D. Stark, Lotte Lauritzen, Mette Kristensen, Alastair B. Ross, Oluf Pedersen, Henrik Vestergaard, and Mads Vendelbo Lind
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Adult ,Male ,Risk ,0301 basic medicine ,medicine.medical_specialty ,Homocysteine ,Cross-sectional study ,Denmark ,Endocrinology, Diabetes and Metabolism ,Hyperhomocysteinemia ,Whole grains ,Young Adult ,03 medical and health sciences ,chemistry.chemical_compound ,Endocrinology ,Internal medicine ,medicine ,Animals ,Humans ,Vitamin B12 ,Metabolic Syndrome ,Principal Component Analysis ,Whole Grains ,030109 nutrition & dietetics ,Nutrition and Dietetics ,Chemistry ,Fishes ,Metabolism ,Middle Aged ,Dietary pattern ,Nutrition Surveys ,medicine.disease ,S-Adenosylhomocysteine ,Diet Records ,Cross-Sectional Studies ,Seafood ,Biochemistry ,Fatty Acids, Unsaturated ,Patient Compliance ,%22">Fish ,Female ,Diet, Healthy ,Metabolic syndrome ,Biomarkers - Abstract
Several B-vitamins act as co-factors in one-carbon metabolism, a pathway that plays a central role in several chronic diseases. However, there is a lack of knowledge of how diet affects markers in one-carbon metabolism. The aim of this study was to explore dietary patterns and components associated with one-carbon metabolites. We hypothesized that intake of whole-grains and fish would be associated with lower Hcy, and higher SAM:SAH ratio due to their nutrient content. We assessed dietary information using a four-day dietary record in 118 men and women with features of the metabolic syndrome. In addition we assessed whole-blood fatty acid composition and plasma alkylresorcinols. Plasma s-adenosylmethionine (SAM), s-adenosylhomocysteine (SAH), homocysteine (Hcy) and vitamin B12 was included as one-carbon metabolism markers. We used principal component analysis (PCA) to explore dietary patterns and multiple linear regression models to examine associations between dietary factors and one-carbon metabolites. PCA separated subjects based on prudent and unhealthy dietary patterns, but the dietary pattern score was not related to the one-carbon metabolites. Whole grain intake was found to be inversely associated to plasma Hcy (?4.7% (?9.3; 0.0), P =.05) and total grain intake tended to be positively associated with SAM and SAH (2.4% (?0.5; 5.5), P =.08; 5.8% (?0.2; 12.1), P =.06, respectively, per SD increase in cereal intake). Fish intake was inversely associated with plasma Hcy and SAH concentrations (?5.4% (?9.7; ?0.8), P =.02 and ?7.0% (?12.1; ?1.5), P =.01, respectively) and positively associated with the SAM:SAH ratio (6.2% (1.6; 11.0), P =.008). In conclusion, intake and fish and whole-grain appear to be associated with a beneficial one-carbon metabolism profile. This indicates that dietary components could play a role in regulation of one-carbon metabolism with a potential impact on disease prevention.
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- 2017
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37. Agpat4/Lpaatδ deficiency highlights the molecular heterogeneity of epididymal and perirenal white adipose depots
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Katherine A. Moes, Emily B. Mardian, Juan J. Aristizabal Henao, Ken D. Stark, Robin E. Duncan, Ryan Bradley, Eric Bombardier, A. Russell Tupling, and Phillip M. Marvyn
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Male ,0301 basic medicine ,medicine.medical_specialty ,Adipose Tissue, White ,Lipolysis ,phospholipids/phosphatidic acid ,Phosphatidic Acids ,Adipose tissue ,White adipose tissue ,QD415-436 ,Biochemistry ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Endocrinology ,Adipocyte ,Internal medicine ,Brown adipose tissue ,Adipocytes ,medicine ,Animals ,triglycerides ,Research Articles ,Cell Size ,Epididymis ,Lipogenesis ,lipid biochemistry ,nutritional and metabolic diseases ,Lipid metabolism ,Organ Size ,Cell Biology ,Phosphatidic acid ,1-Acylglycerol-3-Phosphate O-Acyltransferase ,acylglycerophosphate acyltransferase 4 ,lipolysis and fatty acid metabolism ,adipose tissue ,030104 developmental biology ,medicine.anatomical_structure ,Gene Expression Regulation ,chemistry ,Acyltransferase ,Gene Deletion ,030217 neurology & neurosurgery ,hormones, hormone substitutes, and hormone antagonists - Abstract
Acylglycerophosphate acyltransferase 4 (AGPAT4)/lysophosphatidic acid acyltransferase delta catalyzes the formation of phosphatidic acid (PA), a precursor of triacylglycerol (TAG). We investigated the effect of Agpat4 gene ablation on white adipose tissue (WAT) after finding consistent expression across depots. Epididymal WAT mass was 40% larger in male Agpat4−/− mice than wild-type littermates, but unchanged in perirenal, retroperitoneal, and inguinal WAT and subscapular brown adipose tissue. Metabolic changes were identified in epididymal WAT that were not evident in perirenal WAT, which was analyzed for comparison. The total epididymal TAG content doubled, increasing adipocyte cell size without changing markers of differentiation. Enzymes involved in de novo lipogenesis and complex lipid synthesis downstream of phosphatidic acid production were also unchanged. However, total epididymal TAG hydrolase activity was reduced, and there were significant decreases in total ATGL and reduced phosphorylation of hormone-sensitive lipase at the S563 and S660 PKA-activation sites. Analysis of Agpats 1, 2, 3, and 5, as well as Gpats 1, 2, 3, and 4, demonstrated compensatory upregulation in perirenal WAT that did not occur in epididymal WAT. Our findings therefore indicate depot-specific differences in the redundancy of Agpat4 and highlight the molecular and metabolic heterogeneity of individual visceral depots.
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- 2017
38. (2R,3S,2″R,3″R)-Manniflavanone Protects Proliferating Skeletal Muscle Cells against Oxidative Stress and Stimulates Myotube Formation
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Thomas Hofmann, Jinyoung Hur, Rodney A. Hill, Seung Tack Oh, Mina Kim, Timo D. Stark, Songhee Jeon, Suresh Acharya, Onesmo B. Balemba, Toshiaki Matsutomo, and Sok Cheon Pak
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0301 basic medicine ,Antioxidant ,medicine.medical_treatment ,Muscle Fibers, Skeletal ,Biology ,Protective Agents ,medicine.disease_cause ,Cell Line ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,medicine ,Animals ,Myocyte ,Muscle, Skeletal ,Cell Proliferation ,chemistry.chemical_classification ,Reactive oxygen species ,Plant Extracts ,Skeletal muscle ,Cell Differentiation ,Hydrogen Peroxide ,General Chemistry ,Flavones ,Ascorbic acid ,Up-Regulation ,Cell biology ,Oxidative Stress ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,Biochemistry ,030220 oncology & carcinogenesis ,Plant Bark ,Myogenin ,Myricetin ,Garcinia ,General Agricultural and Biological Sciences ,C2C12 ,Oxidative stress - Abstract
We investigated the antioxidative properties of (2R,3S,2″R,3″R)-manniflavanone (MF) using in vitro assays and examined its effects on myogenesis and lactate-induced oxidative stress in C2C12 cells. MF was purified from Garcinia buchananii stem bark. H2O2 and oxygen radical absorbance capacity assays demonstrated that MF is a powerful antioxidant. This finding was supported by diphenylpicrylhydrazine radical scavenging activity of MF. MF was less cytotoxic to C2C12 cells compared to ascorbic acid and myricetin. Moreover, MF accelerated myotube formation in the differentiated C2C12 cells by up-regulating myogenic proteins such as MyoG and myosin heavy chain. Furthermore, MF rescued late differentiation of myoblast suppressed by lactate treatment and up-regulated the expression levels of Nrf2 in lactate-induced oxidative stress, indicating that MF stimulates antioxidative activity inside C2C12 cells. Collectively, MF is a potent antioxidant with a higher safety profile than ascorbic acid and myricetin. It re...
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- 2017
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39. Two new benzoyl glucuronosyl glycerols from the leaves of Garcinia buchananii Baker
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Timo D. Stark, Thomas Hofmann, Onesmo B. Balemba, and Sofie Lösch
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biology ,010405 organic chemistry ,Stereochemistry ,Chemistry ,Vitexin ,Plant Science ,biology.organism_classification ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,010404 medicinal & biomolecular chemistry ,chemistry.chemical_compound ,Glycerol ,Garcinia ,Agronomy and Crop Science ,Biotechnology - Abstract
Two new benzoyl glucuronosyl glycerols, (2 R )-1- O -4-hydroxy-benzoyl-3- O -α- d -glucuronosyl glycerol ( 1 ) and (2 S )-1- O -4-hydroxy-3-methoxy-benzoyl-3- O -α- d -glucuronosyl glycerol ( 2 ), together with helicioside ( 3 ), quercetin-6- C - β - d -glucopyranoside ( 4 ), apigenin-8- C - β - d -glucopyranosyl-2″- O -L-rhamnopyranoside ( 5 ), vitexin ( 6 ), ( 2R,3R )-aromadendrin-6- C-β- d -glucopyranoside and ( 2R,3R )-taxifolin-6- C-β- d -glucopyranoside were isolated and purified from the leaves of Garcinia buchananii. Their structures were identified by the interpretation of spectroscopic data. This is the first report of compounds 1 - 6 from G. buchananii .
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- 2017
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40. Phytochemical Characterization of Low Molecular Weight Constituents from Marshmallow Roots (Althaea officinalis) and Inhibiting Effects of the Aqueous Extract on Human Hyaluronidase-1
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Jandirk Sendker, Heba Abdel-Aziz, Simone Brandt, Andreas Hensel, Joachim Jose, Isabelle Lengers, Timo D. Stark, Thomas Hofmann, Careen Fink, and Ines Böker
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Keratinocytes ,0301 basic medicine ,Hyaluronoglucosaminidase ,Pharmaceutical Science ,Plant Roots ,01 natural sciences ,Analytical Chemistry ,Althaea ,03 medical and health sciences ,chemistry.chemical_compound ,Betaine ,Drug Discovery ,Humans ,Althaea officinalis ,Proline ,Nuclear Magnetic Resonance, Biomolecular ,Flavonoids ,Pharmacology ,chemistry.chemical_classification ,Chromatography ,Molecular Structure ,biology ,010405 organic chemistry ,Organic Chemistry ,Glycoside ,Coumarin ,biology.organism_classification ,0104 chemical sciences ,Molecular Weight ,030104 developmental biology ,Complementary and alternative medicine ,Biochemistry ,chemistry ,Phytochemical ,Glycine ,Hypolaetin ,Molecular Medicine - Abstract
Extract RE was obtained from the roots of Althaea officinalis in a yield of 8.1%, related to the dried plant material, by extraction with MeOH–H2O (1:1), followed by precipitation with EtOH to remove high molecular weight constituents. Phytochemical investigation of RE revealed the presence of N-phenylpropenoyl-l-amino acid amides 1–5, 8% glycine betaine 6, about 9% total amino acids with proline as the main compound, and about 61% mono- and oligomeric carbohydrates with sucrose as the main compound. Further fractionation revealed the presence of a hypolaetin diglycoside (12) and four hypolaetin glycosides (7–9 and 11) with O-sulfocarbohydrate moieties; additionally, 4′-O-methylisoscutellarein-8-O-β-d-(3″-O-sulfo)glucuronopyranoside (10) and the diglycosylated coumarin haploperoside D (13) were identified. The hypolaetin-O-sulfoglycosides 7–10 are new natural products. RE inhibited the enzymatic activity of surface-displayed human hyaluronidase-1 on Escherichia coli F470 cells with an IC50 of 7.7 mg/mL. R...
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- 2017
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41. Effects of oily fish intake on cardiometabolic markers in healthy 8- to 9-y-old children:the FiSK Junior randomized trial
- Author
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Stine Vuholm, Jeppe Hagstrup Christensen, Camilla T. Damsgaard, Lotte Lauritzen, Ken D. Stark, Jesper Moesgaard Rantanen, Marie N. Teisen, and Christian Mølgaard
- Subjects
Male ,medicine.medical_specialty ,Docosahexaenoic Acids ,medicine.medical_treatment ,Medicine (miscellaneous) ,Blood Pressure ,030209 endocrinology & metabolism ,030204 cardiovascular system & hematology ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,High-density lipoprotein ,children ,Heart Rate ,Internal medicine ,Heart rate ,medicine ,heart rate ,Animals ,Humans ,Oily fish ,Glucose homeostasis ,Child ,Triglycerides ,Nutrition and Dietetics ,Cholesterol ,business.industry ,Insulin ,Cholesterol, HDL ,Fishes ,heart rate variability ,blood pressure ,cholesterol ,Cholesterol, LDL ,Fish oil ,Endocrinology ,Blood pressure ,Eicosapentaenoic Acid ,chemistry ,n-3 long-chain polyunsaturated fatty acids (n-3 LCPUFAs) ,Female ,triacylglycerol ,business ,Biomarkers ,cardiometabolic health - Abstract
BACKGROUND: Fish oil improves cardiometabolic markers in adults, but results in children are inconsistent. Few children meet the recommended fish intake and no randomized trials have investigated how fish intake per se affects children's cardiometabolic profile.OBJECTIVE: We investigated whether oily fish consumption modulated serum triacylglycerol and diastolic blood pressure (coprimary outcomes) and other cardiometabolic markers in healthy Danish children and whether effects were sex-specific.METHODS: In a randomized controlled 12-wk trial, 199 children (aged 8-9 y) received ∼300 g/wk of oily fish or poultry (control). We measured blood pressure, heart rate, and heart rate variability (HRV) via 3-h continuous electrocardiograms and collected fasting blood samples for analysis of erythrocyte EPA [20:5n-3 (ω-3)] + DHA (22:6n-3) and serum triacylglycerol, LDL and HDL cholesterol, glucose, and insulin.RESULTS: One hundred and ninety-seven children (99%) completed the trial. The fish group consumed a median (IQR) of 375 (325-426) g oily fish/wk and the poultry group consumed 400 (359-452) g poultry/wk, which resulted in 2.25 (95% CI: 1.88, 2.62) fatty acid percentage-point higher erythrocyte EPA + DHA in the fish group (P < 0.001). In the fish group, serum triacylglycerol decreased by 0.05 mmol/L (95% CI: 0.00, 0.11 mmol/L) (P = 0.04) and HDL cholesterol increased by 0.07 mmol/L (95% CI: 0.01, 0.13 mmol/L) (P = 0.02); the triacylglycerol effect showed dose-dependency with erythrocyte EPA + DHA (r = -0.15, P = 0.04), whereas HDL showed a tendency for such an association(r = 0.13, P = 0.08). Additional analyses indicated sex-specificity (Pdiet*sex < 0.10), because triacylglycerol was reduced by 0.09 mmol/L (95% CI: 0.02, 0.16 mmol/L) in boys only (girls: -0.00; 95% CI: -0.07, 0.07 mmol/L) and heart rate was reduced by 3.4 bpm (95% CI: 0.2, 6.6 bpm) in girls only (boys: 0.6; 95% CI: -2.6, 3.8 bpm). Blood pressure, HRV, and glucose homeostasis were unaffected.CONCLUSIONS: Oily fish intake improved serum triacylglycerol and HDL cholesterol in a dose-dependent manner in 8- to 9-y-old children, but had no effect on blood pressure, HRV, or glucose homeostasis. This supports recommendations for fish intake in children and underlines the importance of initiatives to increase children's intake of oily fish. This trial was registered at clinicaltrials.gov as NCT02809508.
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- 2019
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42. Supernatants of intestinal luminal contents from mice fed high-fat diet impair intestinal motility by injuring enteric neurons and smooth muscle cells
- Author
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Onesmo B. Balemba, Timo D. Stark, George May, Thomas O. Metz, Sydney Kuther, Heino M. Heyman, Joshua Cady, Jessica Nicholson, Kortni K. Cox, Forrest Potter, Catherine R. Brands, Yvonne Nyavor, Allysha Yasuda, Christopher Miller, and Thomas Hofmann
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Diabetic neuropathy ,Lipopolysaccharide ,Physiology ,Myocytes, Smooth Muscle ,Motility ,Myenteric Plexus ,Inflammation ,Diet, High-Fat ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,Smooth muscle ,Internal medicine ,medicine ,Animals ,Neurons ,Endocrine and Autonomic Systems ,Chemistry ,Enteric neuropathy ,Intestinal Pseudo-Obstruction ,Solid Phase Extraction ,Gastroenterology ,High fat diet ,medicine.disease ,Gastrointestinal Contents ,Intestinal motility ,030104 developmental biology ,Endocrinology ,medicine.symptom ,Gastrointestinal Motility ,030217 neurology & neurosurgery - Abstract
Background Damage to enteric neurons and impaired gastrointestinal muscle contractions cause motility disorders in 70% of diabetic patients. It is thought that enteric neuropathy and dysmotility occur before overt diabetes, but triggers of these abnormalities are not fully known. We tested the hypothesis that intestinal contents of mice with and without high-fat diet- (HFD-) induced diabetic conditions contain molecules that impair gastrointestinal movements by damaging neurons and disrupting muscle contractions. Methods Small and large intestinal segments were collected from healthy, standard chow diet (SCD) fed mice. Filtrates of ileocecal contents (ileocecal supernatants; ICS) from HFD or SCD mice were perfused through them. Cultured intact intestinal muscularis externa preparations were used to determine whether ICS and their fractions obtained by solid-phase extraction (SPE) and SPE subfractions collected by high-performance liquid chromatography (HPLC) disrupt muscle contractions by injuring neurons and smooth muscle cells. Key results ICS from HFD mice reduced intestinal motility, but those from SCD mice had no effect. ICS, aqueous SPE fractions and two out of twenty HPLC subfractions of aqueous SPE fractions from HFD mice blocked muscle contractions, caused a loss of nitrergic myenteric neurons through inflammation, and reduced smooth muscle excitability. Lipopolysaccharide and palmitate caused a loss of nitrergic myenteric neurons but did not affect muscle contractions. Conclusions & inferences Unknown molecules in intestinal contents of HFD mice trigger enteric neuropathy and dysmotility. Further studies are required to identify the toxic molecules and their mechanisms of action.
- Published
- 2019
43. Interlaboratory Assessment of Dried Blood Spot Fatty Acid Compositions
- Author
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Lei Liu, Richard P. Bazinet, Juan J. Aristizabal-Henao, Ken D. Stark, Robert C. Block, William S. Harris, Adam H. Metherel, Liu Ge, Raphaël Chouinard-Watkins, Robert A. Gibson, and J. Thomas Brenna
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0301 basic medicine ,chemistry.chemical_classification ,030109 nutrition & dietetics ,Chemistry ,Organic Chemistry ,Fatty Acids ,Fatty acid ,Cell Biology ,Biochemistry ,Eicosapentaenoic acid ,Dried blood spot ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,Docosahexaenoic acid ,Butylated hydroxytoluene ,Humans ,lipids (amino acids, peptides, and proteins) ,Arachidonic acid ,Food science ,Dried Blood Spot Testing ,Whole blood ,Polyunsaturated fatty acid - Abstract
Dried blood spots for fatty acid profiling are increasing in popularity; however, variability in results between laboratories has not been characterized. Whole blood from two subjects (low and high n-3 polyunsaturated fatty acid [PUFA] status) was collected, 25 μL applied to butylated hydroxytoluene (BHT)-treated chromatography strips, dried in air, and shipped to five laboratories. Results were reported as "routine" (typical fatty acids for each laboratory) or "standardized" (a set of 19 fatty acids), and outliers and variability (%CV) were determined. Five and eight outliers of a possible 91 measures each were identified by routine and standardized reporting, respectively, including eicosapentaenoic acid (EPA, 20:5n-3) in the low n-3 PUFA sample and arachidonic acid in the high n-3 PUFA sample. By standardized reporting, no outliers were identified for EPA or docosahexaenoic acid (DHA, 22:6n-3), and %CV decreased from 8.6% to 6.0% and 9.1% to 6.6% for EPA and 10.5% to 7.2% and 10.5% to 6.6% for DHA in the low and high n-3 PUFA sample, respectively. In conclusion, fatty acid profiles yielded few outliers, and standardization of reporting reduced the variability between laboratories.
- Published
- 2019
44. Formation and Characterization of Polyphenol-Derived Red Chromophores. Enhancing the Color of Processed Cocoa Powders: Part 2
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Thomas Hofmann, Timo D. Stark, and Daniel Germann
- Subjects
0106 biological sciences ,Food Handling ,Color ,Photochemistry ,01 natural sciences ,chemistry.chemical_compound ,Tandem Mass Spectrometry ,Structural isomer ,Chocolate ,Cacao ,Molecular Structure ,010401 analytical chemistry ,Polyphenols ,Catechin ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,Chromophore ,Hydrogen-Ion Concentration ,0104 chemical sciences ,Characterization (materials science) ,Cocoa Powders ,chemistry ,Polyphenol ,Degradation (geology) ,Plant Preparations ,Powders ,General Agricultural and Biological Sciences ,Oxidation-Reduction ,010606 plant biology & botany - Abstract
Very recently, we described the formation of (+)-catechin- and (-)-epicatechin-derived polar chromophores by means of a cocoa alkalization process. In this study we focus on the generation of unpolar chromophores using model reactions via Dutching with softer alkaline conditions. UPLC-HR-ESI-TOF-MSe analysis and one-dimensional and two-dimensional NMR spectroscopy led to the unequivocal identification of dehydrodicatechin- and hydroxyxanthene-derived chromophores. The previously unknown 6- C-linked constitutional isomers of C-6'B/C-6D-(2 R,3 S)-dehydrodicatechin (3, 5) were first described, and furthermore, the dimers dehydrocatechin-C-6'B/C-8D-(2 S,3 S)-epicatechin (2) and dehydrocatechin-C-6'B/C-6D-(2 S,3 S)-epicatechin (4, 6) as well as the reddish-colored chromophores 8- C-xanthenocatechin (7), 8- C-xanthenoepicatechin (8), 6- C-xanthenocatechin (9), and 6- C-xanthenoepicatechin (10) were identified as new compounds. A LC-MS/MS method was developed to screen and quantify both classes of chromophores as well as their precursors in alkalized cocoa powders. The dehydrocatechin dimers showed degradation via the alkalization process; in contrast, the xanthenocatechins highlighted an increase in concentration with stronger alkalization, and, therefore, contribute to cocoa reddening. These results, together with those previously published, give a clear insight into the chemistry of polyphenol-derived chromophores generated by cocoa powder alkalization and enable a better understanding of chromophore formation mechanisms toward a more comprehensive color design of cocoa powders.
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- 2019
45. The Mitochondrial Transacylase, Tafazzin, Regulates AML Stemness by Modulating Intracellular Levels of Phospholipids
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Mathieu Lupien, Yulia Jitkova, Michael Mullokandov, Helen Loo Yau, Rima Al-awar, James R. Hawley, Rose Hurren, Troy Ketela, S. Kim, Veronique Voisin, Neil MacLean, Daniel D. De Carvalho, Mark D. Minden, Geethu E. Thomas, Val A. Fajardo, Ahmed Aman, Zhenyue Hao, Zaza Khuchua, G. Wei Xu, Gary D. Bader, Richard P. Bazinet, Juan J. Aristizabal Henao, Mingjing Xu, Paul J. LeBlanc, Ayesh K. Seneviratne, Steven M. Claypool, Steven M. Chan, Xiaoming Wang, Atan Gross, Aaron D. Schimmer, Ken D. Stark, David Sharon, Raphaël Chouinard-Watkins, Danny V. Jeyaraju, Caitlin Schafer, and Marcela Gronda
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Male ,Cell ,Tafazzin ,Mice, Transgenic ,Mice, SCID ,Mitochondrion ,Biology ,Article ,Mice ,chemistry.chemical_compound ,03 medical and health sciences ,0302 clinical medicine ,Mice, Inbred NOD ,Cell Line, Tumor ,hemic and lymphatic diseases ,Cardiolipin ,Genetics ,medicine ,Animals ,Humans ,Receptor ,Phospholipids ,030304 developmental biology ,Gene knockdown ,0303 health sciences ,Toll-Like Receptors ,Myeloid leukemia ,Phosphatidylserine ,Cell Biology ,Mitochondria ,Cell biology ,Leukemia, Myeloid, Acute ,medicine.anatomical_structure ,chemistry ,Doxorubicin ,030220 oncology & carcinogenesis ,biology.protein ,Molecular Medicine ,Female ,Stem cell ,Acyltransferases ,030217 neurology & neurosurgery ,Intracellular ,Signal Transduction ,Transcription Factors - Abstract
Summary Tafazzin (TAZ) is a mitochondrial transacylase that remodels the mitochondrial cardiolipin into its mature form. Through a CRISPR screen, we identified TAZ as necessary for the growth and viability of acute myeloid leukemia (AML) cells. Genetic inhibition of TAZ reduced stemness and increased differentiation of AML cells both in vitro and in vivo. In contrast, knockdown of TAZ did not impair normal hematopoiesis under basal conditions. Mechanistically, inhibition of TAZ decreased levels of cardiolipin but also altered global levels of intracellular phospholipids, including phosphatidylserine, which controlled AML stemness and differentiation by modulating toll-like receptor (TLR) signaling.
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- 2019
46. Taste Modulating Peptides from Overfermented Cocoa Beans
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Thomas Hofmann, Timo D. Stark, and Mathias Salger
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0106 biological sciences ,Adult ,Male ,Taste ,Salt (chemistry) ,Tripeptide ,Fractionation ,Umami ,01 natural sciences ,High-performance liquid chromatography ,Matrix (chemical analysis) ,Young Adult ,Tandem Mass Spectrometry ,Humans ,Taste Threshold ,Chromatography, High Pressure Liquid ,chemistry.chemical_classification ,Cacao ,Chromatography ,Chemistry ,010401 analytical chemistry ,General Chemistry ,Hydrogen-Ion Concentration ,0104 chemical sciences ,Flavoring Agents ,Fermentation ,Seeds ,Female ,General Agricultural and Biological Sciences ,Peptides ,010606 plant biology & botany - Abstract
Activity-guided fractionation of an aqueous extract of overfermented cocoa beans, which were recently found to be a rich source of previously unknown taste enhancing substances, revealed the presence of a series of taste modulating short peptides. Fractionation was achieved by means of sequential solvent extraction, medium pressure liquid chromatography, as well as preparative high pressure liquid chromatography, and the taste modulating activity was determined by means of matrix assisted taste dilution analysis. By means of ultra performance liquid chromatography-time-of-flight-mass spectrometry (UPLC-ToF-MS) screening, liquid chromatography-MS/MS methods, and customized syntheses, numerous short peptides could be identified in the taste modulating fractions. Sensory experiments of the target peptides showed umami enhancing and salt taste enhancing properties as well as kokumi effects when applied in a savory taste matrix. Evaluation of the taste threshold concentrations in model broth demonstrated a high taste modulating potential of 11 out of 13 identified peptides. Lowest threshold concentrations were determined for the salt taste enhancing tripeptide pEEE (55 μmol/L) and the kokumi active tripeptide VPA (90 μmol/L). Furthermore, a large number of dipeptides, carrying either a prolyl- or pyro-glutamyl moiety were located in the aqueous extract, exhibiting taste modulating properties and revealing a pH dependency of the taste modulating effect of the savory taste matrix. Additionally, synergistic effects of a mixture of five umami enhancing pyro-glutamyl dipeptides in the model matrix were demonstrated.
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- 2019
47. Development of a Rapid Ultra High-Performance Liquid Chromatography/Tandem Mass Spectrometry Method for the Analysis of sn-1 and sn-2 Lysophosphatidic Acid Regioisomers in Mouse Plasma
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Ken D. Stark, Maria F. Fernandes, Juan J. Aristizabal-Henao, and Robin E. Duncan
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0301 basic medicine ,030109 nutrition & dietetics ,Chromatography ,Resolution (mass spectrometry) ,Molecular Structure ,Chemistry ,Organic Chemistry ,Extraction (chemistry) ,Cell Biology ,Carbohydrate metabolism ,Mass spectrometry ,Biochemistry ,Mice, Inbred C57BL ,03 medical and health sciences ,chemistry.chemical_compound ,Mice ,030104 developmental biology ,Liquid chromatography–mass spectrometry ,Tandem Mass Spectrometry ,Lysophosphatidic acid ,Structural isomer ,Molecule ,Animals ,Lysophospholipids ,Chromatography, High Pressure Liquid - Abstract
Lysophosphatidic acids (lysoPtdOH) are involved in several physiological processes including cell proliferation, inflammation, and glucose metabolism. However, measuring lysoPtdOH is challenging due to inadequate extraction techniques, poor chromatographic resolution, or the inability to discriminate between sn-1 and sn-2 regioisomers. In the present work, we developed a high-throughput (10 min run times) ultra-high-performance liquid chromatography-tandem mass spectrometry method capable of discriminating lysoPtdOH species by their fatty acyl composition and sn-localization on glycerol backbones. We quantitated sn-1/sn-2 regioisomeric pairs of lysoPtdOH with 16:0, 18:0, 18:1, 18:2, 20:4, and 22:6 fatty acyl chains using 50 μL of mouse plasma. The method presented here can be expanded to profile more lysoPtdOH species, and has the potential to be used in clinical settings to quickly screen lysoPtdOH profiles. Finally, the ability to discriminate between sn-1 and sn-2 isomers can provide insights regarding the metabolic origins and fates of specific lysoPtdOH molecules.
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- 2019
48. Antioxidative Maillard Reaction Products Generated in Processed Aged Garlic Extract
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Junichiro Wakamatsu, Timo D. Stark, and Thomas Hofmann
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0106 biological sciences ,Glycation End Products, Advanced ,Antioxidant ,Hot Temperature ,Magnetic Resonance Spectroscopy ,Oxygen radical absorbance capacity ,medicine.medical_treatment ,Picolinic acid ,01 natural sciences ,Antioxidants ,chemistry.chemical_compound ,Acetic acid ,symbols.namesake ,Tandem Mass Spectrometry ,medicine ,Hydroxymethyl ,Cooking ,Garlic ,Chromatography, High Pressure Liquid ,ABTS ,Molecular Structure ,Plant Extracts ,010401 analytical chemistry ,General Chemistry ,0104 chemical sciences ,Maillard Reaction ,Maillard reaction ,chemistry ,symbols ,General Agricultural and Biological Sciences ,Citric acid ,010606 plant biology & botany ,Nuclear chemistry - Abstract
A powder formulation of aged garlic extract was heated at 100 °C for 1 day to obtain higher antioxidant activity determined with 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid) (ABTS) radical scavenging (ARS) and oxygen radical absorbance capacity (ORAC) assays. Activity-guided fractionation afforded 12 new in vitro antioxidative Maillard-type products, α-[(2-formyl-5-hydroxymethyl)pyrrol-1-yl]arginine (3), 4-[7-hydroxy-6-(hydroxymethyl)-7,8-dihydro-6 H-pyrano[2,3- b] pyrazine-3-yl]butane-1,2,3-triol (4), 4-[6-(1,2-dihydroxyethyl)-6,7-dihydro-furo[2,3- b]pyrazin-3-yl]-butane-1,2,3-triol (5), α-[(2-formyl-5-hydroxymethyl)-pyrrol-1-yl] aspartic acid (12), 1-[5-(1,2-dihydroxyethyl)-2-oxotetrahydrofuran-3-yl]-5-(hydroxymethyl)-1 H-pyrrole-2-carbaldehyde (14), 4-(6-ethyl-2-pyrazinyl)-1,2,3-butanetriol (17), α-[(2-formyl-5-hydroxymethyl)pyrrol-1-yl] glutamic acid (19), ( S)-1-[(5-hydroxymethyl)furan-2-yl]methyl]-5-oxopyrrolidine-2-carboxylic acid (20), 3-hydroxy-1 H-[{5-(hydroxymethyl)furan-2-yl}methyl]-2,5-dioxo-3-pyrrolidine acetic acid (21), ( E)-4-(5-methylpyrazin-2-yl)but-3-ene-7,2-diol (23), 4-acetyl-6-(hydroxymethyl)picolinic acid (24), ( E)-4-(6-methylpyrazin-2-yl)but-3-ene-1,2-diol (26) and 14 known compounds, 1, 2, 6-11, 13, 15, 16, 18, 22 and 25, which were characterized via 1D/2D-NMR, CD spectroscopy, and mass spectrometry. ARS and ORAC activities of these antioxidants ranged from 0.01 to 0.49 μmol TE/μmol and from 0.01 to 3.50 μmol TE/μmol, respectively. Additionally, plausible formation pathways for the new organic acid-type products (15, 20, and 21) were proposed based on proving their generation in model reactions detected via liquid chromatography-mass spectrometry (LC-MS/MS).
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- 2019
49. Content of n-3 LC-PUFA in Breast Milk Four Months Postpartum is Associated with Infancy Blood Pressure in Boys and Infancy Blood Lipid Profile in Girls
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Signe Bruun, Ken D. Stark, Lotte Lauritzen, Lenie van Rossem, Gitte Zachariassen, Lotte Neergaard Jacobsen, Steffen Husby, Maria B. Sandberg, Kim F. Michaelsen, and Jan Sørensen
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0301 basic medicine ,Male ,Breastfeeding ,Physiology ,Blood lipids ,Blood Pressure ,030204 cardiovascular system & hematology ,Triglyceride ,chemistry.chemical_compound ,0302 clinical medicine ,Faculty of Science ,Medicine ,Omega-3 ,Nutrition and Dietetics ,Human milk ,Gestational age ,food and beverages ,human milk ,cardiovascular health ,Milk composition ,Cholesterol ,Female ,omega-3 ,Cohort study ,lcsh:Nutrition. Foods and food supply ,Offspring ,lcsh:TX341-641 ,Breast milk ,fatty acids ,Article ,03 medical and health sciences ,milk composition ,Fatty Acids, Omega-3 ,cohort study ,Humans ,triglyceride ,Fatty acids ,030109 nutrition & dietetics ,Milk, Human ,business.industry ,cholesterol ,Infant ,Maternal Nutritional Physiological Phenomena ,Cardiovascular health ,Blood pressure ,chemistry ,business ,Body mass index ,Food Science - Abstract
Blood pressure (BP) and blood lipid profile (BLP) have been shown to track from childhood into adulthood, and n-3 long-chain polyunsaturated fatty acids (LC-PUFAs) in breast milk have been suggested as mediators of the beneficial long-term effect of breastfeeding on BP and BLP. We aimed to investigate associations between n-3 LC-PUFA content in breast milk at 4 months postpartum and offspring BP and BLP in early life. BP and BLP were measured at 4, 18, and 36 months. Statistical analyses were sex-stratified and adjusted for gestational age, maternal pre-pregnancy body mass index (BMI), and maternal educational level. Based on 336 mother-child dyads, high n-3 LC-PUFA in breast milk was inversely associated with systolic and diastolic BP in boys at 4 months (&beta, = &minus, 20.0 (95% CI = &minus, 33.4, &minus, 6.7), p = 0.004 and &beta, 10.2 (95% CI = &minus, 19.8, &minus, 0.5), p = 0.039, respectively), inversely associated with HDL cholesterol, and directly associated with triglyceride in girls at 4 months (&beta, 0.7 (95% CI = &minus, 1.1, &minus, 0.3), p = 0.001 and &beta, = 3.1 (95% CI = 1.0, 5.2), p = 0.005, respectively). Associations observed at the later time points were non-significant. Furthermore, we observed sex-specific changes over time in both size and direction of the associations. Our results indicate that early intake of n-3 LC-PUFA can affect early development in cardiometabolic factors such as BP and BLP in a sex-specific manner. Follow-up and further investigation in later childhood is planned.
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- 2019
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50. Human biomonitoring results of contaminant and nutrient biomarkers in Old Crow, Yukon, Canada
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Shannon E. Majowicz, Dan Chalil, Ken D. Stark, Megan Williams, Mallory Drysdale, Mary Gamberg, Brian D. Laird, Mylène Ratelle, Kelly Skinner, Joshua Garcia-Barrios, and Michèle Bouchard
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Adult ,Canada ,Environmental Engineering ,010504 meteorology & atmospheric sciences ,chemistry.chemical_element ,Urine ,010501 environmental sciences ,01 natural sciences ,chemistry.chemical_compound ,Nutrient ,Yukon Territory ,Environmental health ,Biomonitoring ,Animals ,Humans ,Environmental Chemistry ,Waste Management and Disposal ,0105 earth and related environmental sciences ,Crows ,2. Zero hunger ,Pollutant ,Arctic Regions ,Hexachlorobenzene ,Contamination ,Pollution ,Mercury (element) ,chemistry ,Dichlorodiphenyldichloroethylene ,13. Climate action ,Environmental science ,Environmental Pollutants ,Biomarkers ,Biological Monitoring ,Environmental Monitoring - Abstract
Several large-scale human biomonitoring projects have been conducted in Canada, including the Canadian Health Measures Survey (CHMS) and the First Nations Biomonitoring Initiative (FNBI). However, neither of these studies included participants living in the Yukon. To address this data gap, a human biomonitoring project was implemented in Old Crow, a fly-in Gwich'in community in the northern Yukon. The results of this project provide baseline levels of contaminant and nutrient biomarkers from Old Crow in 2019. Samples of hair, blood, and/or urine were collected from approximately 44% of community residents (77 of 175 adults). These samples were analyzed for contaminants (including heavy metals and persistent organic pollutants (POPs)), and nutrients (including trace elements and omega-3 fatty acids). Levels of these analytes were compared to health-based guidance values, when available, and results from other human biomonitoring projects in Canada. Levels of lead (GM 0.64 μg/g creatinine in urine/24 μg/L blood), cadmium (GM 0.32 μg/g creatinine in urine/0.85 μg/L blood), and mercury (GM
- Published
- 2021
- Full Text
- View/download PDF
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