13 results on '"Annette Gendron-Fitzpatrick"'
Search Results
2. Macrophages Educated with Exosomes from Primed Mesenchymal Stem Cells Treat Acute Radiation Syndrome by Promoting Hematopoietic Recovery
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Christian M. Capitini, Paul D. Bates, Annette Gendron-Fitzpatrick, Eric G. Schmuck, Jessica D. Pederson, Amish N. Raval, Soroush Besharat, Peiman Hematti, Charlie J. Childs, John A. Kink, Melissa E. Graham, Matthew H. Forsberg, and Sofiya Reshetylo
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Lipopolysaccharides ,Male ,Lipopolysaccharide ,Spleen ,Exosomes ,Exosome ,Article ,Cell therapy ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Mice, Inbred NOD ,Animals ,Humans ,Medicine ,Transplantation ,business.industry ,Macrophages ,Mesenchymal stem cell ,Hematopoietic Tissue ,Mesenchymal Stem Cells ,Hematology ,Hematopoiesis ,Radiation Injuries, Experimental ,Haematopoiesis ,medicine.anatomical_structure ,Acute Radiation Syndrome ,chemistry ,030220 oncology & carcinogenesis ,Cancer research ,Female ,Bone marrow ,business ,030215 immunology - Abstract
In the setting of radiation-induced trauma, exposure to high levels of radiation can cause an acute radiation syndrome (ARS) causing bone marrow (BM) failure, leading to life-threatening infections, anemia, and thrombocytopenia. We have previously shown that human macrophages educated with human mesenchymal stem cells (MSCs) by coculture can significantly enhance survival of mice exposed to lethal irradiation. In this study, we investigated whether exosomes isolated from MSCs could replace direct coculture with MSCs to generate exosome educated macrophages (EEMs). Functionally unique phenotypes were observed by educating macrophages with exosomes from MSCs (EEMs) primed with bacterial lipopolysaccharide (LPS) at different concentrations (LPS-low EEMs or LPS-high EEMs). LPS-high EEMs were significantly more effective than uneducated macrophages, MSCs, EEMs, or LPS-low EEMs in extending survival after lethal ARS in vivo. Moreover, LPS-high EEMs significantly reduced clinical signs of radiation injury and restored hematopoietic tissue in the BM and spleen as determined by complete blood counts and histology. LPS-high EEMs showed significant increases in gene expression of STAT3, secretion of cytokines like IL-10 and IL-15, and production of growth factors like FLT-3L. LPS-EEMs also showed increased phagocytic activity, which may aid with tissue remodeling. LPS-high EEMs have the potential to be an effective cellular therapy for the management of ARS.
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- 2019
3. Author response for 'Migration patterns and wintering distribution of common loons breeding in the Upper Midwest'
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Annette Gendron-Fitzpatrick, Scott L. Ford, Steven C. Houdek, Robert J. Kratt, Kevin P. Kenow, Carrol L. Henderson, Timothy J. Fox, Brian R. Gray, Luke J. Fara, Michael W. Meyer, and Darryl J. Heard
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Geography ,business.industry ,Distribution (economics) ,Physical geography ,business - Published
- 2020
4. Robotically Assisted Sonic Therapy as a Noninvasive Nonthermal Ablation Modality: Proof of Concept in a Porcine Liver Model
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Timothy J. Ziemlewicz, Mircea M. Cristescu, Amanda R. Smolock, Annette Gendron-Fitzpatrick, Chelsey M. Green, Fred T. Lee, Eli Vlaisavljevich, and Jonathan Cannata
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Liver tumor ,Swine ,medicine.medical_treatment ,Proof of Concept Study ,030218 nuclear medicine & medical imaging ,Sphericity ,03 medical and health sciences ,Histotripsy ,0302 clinical medicine ,Robotic Surgical Procedures ,Porcine liver ,medicine ,Animals ,Radiology, Nuclear Medicine and imaging ,Animal use ,medicine.diagnostic_test ,business.industry ,Magnetic resonance imaging ,Ablation ,medicine.disease ,Magnetic Resonance Imaging ,Disease Models, Animal ,Liver ,Surgery, Computer-Assisted ,030220 oncology & carcinogenesis ,High-Intensity Focused Ultrasound Ablation ,Female ,Nuclear medicine ,business ,Ablation zone - Abstract
Purpose To determine the feasibility of creating a clinically relevant hepatic ablation (ie, an ablation zone capable of treating a 2-cm liver tumor) by using robotically assisted sonic therapy (RAST), a noninvasive and nonthermal focused ultrasound therapy based on histotripsy. Materials and Methods This study was approved by the institutional animal use and care committee. Ten female pigs were treated with RAST in a single session with a prescribed 3-cm spherical treatment region and immediately underwent abdominal magnetic resonance (MR) imaging. Three pigs (acute group) were sacrificed immediately following MR imaging. Seven pigs (chronic group) were survived for approximately 4 weeks and were reimaged with MR imaging immediately before sacrifice. Animals underwent necropsy and harvesting of the liver for histologic evaluation of the ablation zone. RAST ablations were performed with a 700-kHz therapy transducer. Student t tests were performed to compare prescribed versus achieved ablation diameter, difference of sphericity from 1, and change in ablation zone volume from acute to chronic imaging. Results Ablation zones had a sphericity index of 0.99 ± 0.01 (standard deviation) (P < .001 vs sphericity index of 1). Anteroposterior and transverse dimensions were not significantly different from prescribed (3.4 ± 0.7; P = .08 and 3.2 ± 0.8; P = .29, respectively). The craniocaudal dimension was significantly larger than prescribed (3.8 ± 1.1; P = .04), likely because of respiratory motion. The central ablation zone demonstrated complete cell destruction and a zone of partial necrosis. A fibrous capsule surrounded the ablation zone by 4 weeks. On 4-week follow-up images, ablation zone volumes decreased by 64% (P < .001). Conclusion RAST is capable of producing clinically relevant ablation zones in a noninvasive manner in a porcine model. © RSNA, 2018.
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- 2018
5. Maternal Diets Deficient in Vitamin D Increase the Risk of Kyphosis in Offspring: A Novel Kyphotic Porcine Model
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Thomas D. Crenshaw, Ellen M. Leiferman, Matthew S. Chin, Blake Hildahl, Matthew A. Halanski, Heather M. Hartwig-Stokes, Annette Gendron-Fitzpatrick, Rachel L. Lenhart, Laura A Amundson, Jennifer Birstler, Ronald P. McCabe, and Rajeev Chaudhary
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Vitamin ,Male ,Bone density ,Offspring ,Swine ,Kyphosis ,Physiology ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Bone Density ,Pregnancy ,medicine ,Vitamin D and neurology ,Animals ,Orthopedics and Sports Medicine ,Vitamin D ,030222 orthopedics ,Cobb angle ,business.industry ,General Medicine ,medicine.disease ,Vitamin D Deficiency ,Magnetic Resonance Imaging ,Sagittal plane ,Spine ,Diet ,medicine.anatomical_structure ,chemistry ,Prenatal Exposure Delayed Effects ,Dietary Supplements ,Surgery ,Female ,business ,Tomography, X-Ray Computed ,030217 neurology & neurosurgery - Abstract
BACKGROUND The purpose of this study was to explore the role of perinatal vitamin-D intake on the development and characterization of hyperkyphosis in a porcine model. METHODS The spines of 16 pigs were assessed at 9, 13, and 17 weeks of age with radiography and at 17 weeks with computed tomography (CT), magnetic resonance imaging (MRI), histology, and bone-density testing. An additional 169 pigs exposed to 1 of 3 maternal dietary vitamin-D levels from conception through the entire lactation period were fed 1 of 4 nursery diets supplying different levels of vitamin D, calcium, and phosphorus. When the animals were 13 weeks of age, upright lateral spinal radiography was performed with use of a custom porcine lift and sagittal Cobb angles were measured in triplicate to determine the degree of kyphosis in each pig. RESULTS The experimental animals had significantly greater kyphotic sagittal Cobb angles at all time points when compared with the control animals. These hyperkyphotic deformities demonstrated no significant differences in Hounsfield units, contained a slightly lower ash content (46.7% ± 1.1% compared with 50.9% ± 1.6%; p < 0.001), and demonstrated more physeal irregularities. Linear mixed model analysis of the measured kyphosis demonstrated that maternal diet had a greater effect on sagittal Cobb angle than did nursery diet and that postnatal supplementation did not completely eliminate the risk of hyperkyphosis. CONCLUSIONS Maternal diets deficient in vitamin D increased the development of hyperkyphosis in offspring in this model. CLINICAL RELEVANCE This study demonstrates that decreased maternal dietary vitamin-D intake during pregnancy increases the risk of spinal deformity in offspring. In addition, these data show the feasibility of generating a large-animal spinal-deformity model through dietary manipulation alone.
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- 2018
6. Mice Engrafted with Human Fetal Thymic Tissue and Hematopoietic Stem Cells Develop Pathology Resembling Chronic Graft-versus-Host Disease
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Ying Zhou, Shannon C. Kenney, Christian M. Capitini, Jenny E. Gumperz, Yusof A. Becker, Annette Gendron-Fitzpatrick, Peiman Hematti, Shidong Ma, Jennifer L. Lockridge, and William J. Burlingham
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Pathology ,medicine.medical_specialty ,Humanized mouse ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Chronic GVHD ,Medicine ,030304 developmental biology ,0303 health sciences ,Transplantation ,business.industry ,FOXP3 ,Hematopoietic stem cell ,Hematology ,medicine.disease ,3. Good health ,Thymic Tissue ,Haematopoiesis ,Graft-versus-host disease ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Immunology ,Stem cell ,business - Abstract
Chronic graft-versus-host disease (cGVHD) is a significant roadblock to long-term hematopoietic stem cell (HSC) transplantation success. Effective treatments for cGVHD have been difficult to develop, in part because of a paucity of animal models that recapitulate the multiorgan pathologies observed in clinical cGVHD. Here we present an analysis of the pathology that occurs in immunodeficient mice engrafted with human fetal HSCs and implanted with fragments of human fetal thymus and liver. Starting at time points generally later than 100 days post-transplantation, the mice developed signs of illness, including multiorgan cellular infiltrates containing human T cells, B cells, and macrophages; fibrosis in sites such as lungs and liver; and thickened skin with alopecia. Experimental manipulations that delayed or reduced the efficiency of the HSC engraftment did not affect the timing or progression of disease manifestations, suggesting that pathology in this model is driven more by factors associated with the engrafted human thymic organoid. Disease progression was typically accompanied by extensive fibrosis and degradation of the thymic organoid, and there was an inverse correlation of disease severity with the frequency of FoxP3+ thymocytes. Hence, the human thymic tissue may contribute T cells with pathogenic potential, but the generation of regulatory T cells in the thymic organoid may help to control these cells before pathology resembling cGVHD eventually develops. This model thus provides a new system to investigate disease pathophysiology relating to human thymic events and to evaluate treatment strategies to combat multiorgan fibrotic pathology produced by human immune cells.
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- 2013
7. Tumor necrosis factor alpha, citrullination, and peptidylarginine deiminase 4 in lung and joint inflammation
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Thomas F. Warner, Annette Gendron-Fitzpatrick, Ryan Rebernick, Miriam A. Shelef, Anthony P. Nicholas, Daeun Shim, Lennart K. A. Lundblad, Paul R. Thompson, and Mandar Bawadekar
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0301 basic medicine ,Hydrolases ,Blotting, Western ,Arthritis ,Mice, Transgenic ,Inflammation ,Protein citrullination ,Arthritis, Rheumatoid ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Protein-Arginine Deiminase Type 4 ,Citrulline ,medicine ,Animals ,Humans ,Rheumatoid arthritis ,Lung ,030203 arthritis & rheumatology ,Peptidylarginine deiminase 4 ,Tumor Necrosis Factor-alpha ,business.industry ,Citrullination ,Pneumonia ,respiratory system ,medicine.disease ,Arthritis, Experimental ,respiratory tract diseases ,3. Good health ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,TNF-α ,Experimental arthritis ,Immunology ,Tumor necrosis factor alpha ,medicine.symptom ,business ,Protein Processing, Post-Translational ,Research Article - Abstract
Background The relationship between lung and joint inflammation in rheumatoid arthritis is poorly understood. Lung inflammation with resultant protein citrullination may trigger anti-citrullinated protein antibodies, inflammation, and arthritis. Alternatively, lung and joint inflammation may be two manifestations of a single underlying pathology. The lung has increased citrullination and TNF-α levels are high in rheumatoid arthritis; however, it is unknown if TNF-α can induce lung protein citrullination. The citrullinating enzyme peptidylarginine deiminase 4 (PAD4) exacerbates TNF-α-induced arthritis, but a role for PAD4 in lung citrullination and TNF-α-induced lung inflammation has not been explored. Our aim was to use TNF-α-overexpressing mice to clarify the intersection of TNF-α, citrullination, PAD4, arthritis, and lung inflammation. Methods Lung protein citrullination in wild-type mice, mice that overexpress TNF-α systemically (TNF+), TNF+PAD4+/+, and TNF+PAD4-/- mice was quantified by both gel electrophoresis using a citrulline probe and western blot. Hematoxylin and eosin (H&E)-stained lung sections from TNF+PAD4+/+ and TNF+PAD4-/- mice were scored for lung inflammation. H&E-stained ankle joint sections from mice that overexpress TNF-α only in the lungs were assessed for arthritis. Results TNF+ mice have increased lung protein citrullination. TNF+PAD4-/- mice do not have significantly reduced lung protein citrullination, but do have decreased lung inflammation compared to TNF+PAD4+/+ mice. Mice that overexpress TNF-α only in the lungs do not develop arthritis. Conclusions PAD4 exacerbates lung inflammation downstream of TNF-α without having a major role in generalized protein citrullination in inflamed lungs. Also, TNF-α-induced lung inflammation is not sufficient to drive murine arthritis. Electronic supplementary material The online version of this article (doi:10.1186/s13075-016-1068-0) contains supplementary material, which is available to authorized users.
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- 2016
8. Use of Capecitabine to Prevent Acute Renal Allograft Rejection in Dog Erythrocyte Antigen-Mismatched Mongrel Dogs
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Jonathan F. McAnulty, Annette Gendron-Fitzpatrick, Michelle Schwab, Richard R. Dubielzig, Chad W. Schmiedt, Milan Milovancev, and Ellison Bentley
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Graft Rejection ,Antimetabolites, Antineoplastic ,medicine.medical_specialty ,medicine.medical_treatment ,Interstitial nephritis ,Dose-Response Relationship, Immunologic ,Administration, Oral ,Pilot Projects ,Deoxycytidine ,Nephrectomy ,Capecitabine ,Dogs ,Postoperative Complications ,medicine ,Animals ,Transplantation, Homologous ,Prospective Studies ,Kidney transplantation ,Dose-Response Relationship, Drug ,General Veterinary ,medicine.diagnostic_test ,business.industry ,Complete blood count ,medicine.disease ,Kidney Transplantation ,Survival Analysis ,Blood Cell Count ,Surgery ,Transplantation ,Regimen ,Treatment Outcome ,Cyclosporine ,Prednisolone ,Drug Therapy, Combination ,Female ,Fluorouracil ,business ,Immunosuppressive Agents ,medicine.drug - Abstract
Objective— To assess efficacy and toxicity of a capecitabine (CAP)-based regimen for preventing rejection of renal allografts in dog erythrocyte antigen (DEA)-mismatched mongrel dogs. Study Design— Prospective, pilot study. Animals— Eight healthy, unrelated, DEA mismatched, adult mongrel dogs. Methods— All dogs received CAP, starting at 50 mg/m2 PO b.i.d. 4 days preoperatively, increasing to 200 mg/m2 PO b.i.d. by the day of surgery. All dogs received cyclosporine-A (CsA) and prednisolone starting 2 days preoperatively. Standard heterotopic renal transplantation with native nephrectomy was performed. After 90 days, surviving dogs were euthanatized and histopathologic examination was performed. Results— Two of 8 dogs developed acute neurotoxicity leading to death or euthanasia within 5 days of surgery. For the 6 remaining dogs, there were no statistically significant changes in complete blood count or serum biochemical values. No opportunistic infections developed during the study period. Five of 6 dogs had no to minimal evidence of graft rejection. Two of 6 dogs developed superficial and pigmentary keratitis. Significant histopathologic findings in all dogs included mild lymphoplasmacytic gastroenteritis, steroid hepatopathy, and corneal epithelial thinning. One dog had moderate interstitial nephritis and pyelitis. Conclusions— In this experimental model, a CAP–CsA–prednisolone immunosuppressive regimen was effective in preventing rejection of allografts in DEA-mismatched dogs. Severe, unpredictable neurotoxicity and variable ocular toxicity significantly limit clinical applications at this time. Clinical Relevance— A CAP–CsA–prednisolone protocol is an effective, oral immunosuppressive regimen for prevention of allograft rejection in DEA-mismatched mongrel dogs. For clinical application, identification of patients susceptible to toxic side effects would be necessary.
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- 2007
9. Investigation of fiber-optic probe designs for optical spectroscopic diagnosis of epithelial pre-cancers
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Quan Liu, Melissa C. Skala, Nirmala Ramanujam, Annette Gendron-Fitzpatrick, Kristin M. Vrotsos, Crystal L. Marshek-Stone, Gregory M. Palmer, and Changfang Zhu
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Mouth neoplasm ,Optical fiber ,Materials science ,business.industry ,Dermatology ,Laser ,Fluorescence ,Fluorescence spectroscopy ,Epithelium ,law.invention ,medicine.anatomical_structure ,Optics ,law ,Cheek pouch ,medicine ,Surgery ,business ,Spectroscopy ,Biomedical engineering - Abstract
Background and Objectives The first objective of this study was to evaluate the performance of fluorescence spectroscopy for diagnosing pre-cancers in stratified squamous epithelial tissues in vivo using two different probe geometries with (1) overlapping versus (2) non-overlapping illumination and collection areas on the tissue surface. Probe (1) and probe (2) are preferentially sensitive to the fluorescence originating from the tissue surface and sub-surface tissue depths, respectively. The second objective was to design a novel, angled illumination fiber-optic probe to maximally exploit the depth-dependent fluorescence properties of epithelial tissues. Study Design/Materials and Methods In the first study, spectra were measured from epithelial pre-cancers and normal tissues in the hamster cheek pouch and analyzed with a non-parametric classification algorithm. In the second study, Monte Carlo modeling was used to simulate fluorescence measurements from an epithelial tissue model with the angled illumination probe. Results An unbiased classification algorithm based on spectra measured with probes (1) and (2), classified pre-cancerous and normal tissues with 78 and 94% accuracy, respectively. The angled illumination probe design provides the capability to detect fluorescence from a wide range of tissue depths in an epithelial tissue model. Conclusions The first study demonstrates that fluorescence originating from sub-surface tissue depths (probe (2)) is more diagnostic than fluorescence originating from the tissue surface (probe (1)) in the hamster cheek pouch model. However in general, it is difficult to know a priori the optimal probe geometry for pre-cancer detection in a particular epithelial tissue model. The angled illumination probe provides the capability to measure tissue fluorescence selectively from different depths within epithelial tissues, thus obviating the need to select a single optimal probe design for the fluorescence-based diagnosis of epithelial pre-cancers. Lasers Surg. Med. 34:25–38, 2004. © 2004 Wiley-Liss, Inc.
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- 2004
10. Individual isomers of conjugated linoleic acid reduce inflammation associated with established collagen-induced arthritis in DBA/1 mice
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Daniel E. Butz, Mark E. Cook, Tyler G. Fulmer, James P. Campbell, Annette Gendron-Fitzpatrick, and Shane M. Huebner
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Male ,medicine.medical_specialty ,Ratón ,Conjugated linoleic acid ,Linoleic acid ,Interleukin-1beta ,Medicine (miscellaneous) ,Arthritis ,Inflammation ,Adaptive Immunity ,chemistry.chemical_compound ,Mice ,Immune system ,Internal medicine ,medicine ,Animals ,Linoleic Acids, Conjugated ,Collagen Type II ,Nutrition and Dietetics ,integumentary system ,business.industry ,Foot ,Fatty Acids ,food and beverages ,medicine.disease ,Peptide Fragments ,Disease Models, Animal ,Endocrinology ,chemistry ,Liver ,Mice, Inbred DBA ,Rheumatoid arthritis ,Immunoglobulin G ,Immunology ,lipids (amino acids, peptides, and proteins) ,Collagen ,medicine.symptom ,business ,Chickens ,Corn oil - Abstract
Previously, dietary conjugated linoleic acid [(CLA), an equal mixture of cis-9, trans-11 (c9t11) and trans-10, cis-12 (t10c12) CLA isomers], was found to reduce inflammation in the murine collagen antibody-induced arthritis model, but less so in the murine collagen-induced arthritis (CIA) model, an arthritic model dependent upon acquired immunity. Because CLA is known to alter the acquired immune response, it was hypothesized that feeding CLA after the establishment of arthritis would reduce paw swelling in the CIA model. In this study, upon the establishment of arthritic symptoms, mice were randomized to the following dietary treatments: corn oil (CO) control (n = 6), 0.5% c9t11-CLA (n = 8), 0.5% t10c12-CLA (n = 6), or 1% combined CLA (1:1 c9t11:t10c12-CLA, n = 6). Paws were scored for severity of arthritis and measured for changes in thickness during an 84-d study period. Dietary c9t11- and combined-CLA similarly decreased the arthritic score (29%, P = 0.036, P = 0.049, respectively, when normalized to initial score) and paw thickness (0.11 mm, P = 0.027, P = 0.035, respectively) compared with CO. Dietary t10c12-CLA reduced the arthritic score (41%, P = 0.007 when normalized) and paw thickness (0.12 mm, P = 0.013) relative to CO. Reduced interleukin-1beta on d 7 and 21 for all CLA treatments (n = 3) relative to CO suggested that antiinflammatory effects of CLA isomers might work by common mechanisms of known pathways involved in chronic inflammation. In conclusion, dietary CLA reduced inflammation associated with CIA, and both c9t11-CLA and t10c12-CLA exhibited antiinflammatory effects.
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- 2010
11. 116-POS
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Cynthia E. Shaw, Jeffrey M. Denney, Dinesh Shah, Annette Gendron-Fitzpatrick, and Ian M. Bird
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medicine.medical_specialty ,Kidney ,Proteinuria ,business.industry ,Obstetrics and Gynecology ,medicine.disease ,Pathophysiology ,Preeclampsia ,Endocrinology ,medicine.anatomical_structure ,Blood pressure ,Placenta ,Internal medicine ,Internal Medicine ,medicine ,medicine.symptom ,business ,Phenylephrine ,Mesenteric arteries ,medicine.drug - Abstract
Objectives We evaluated role of sFlt-1 and VEGF in a preeclampsia model driven by RAS activation. We hypothesized as transgenic crossbreeds develop preeclampsia, features of hypertension, proteinuria, kidney and placenta end-organ damage will occur concurrently with (1) sFlt1 rising higher in preeclamptic mice, (2) VEGF remaining high in preeclamptic mice but equivalent to controls; and, (3) preeclamptic kidneys demonstrating increased VEGF binding. Methods Transgenic hAGT and hREN, or wild type (WT) mice were used. Non-gravid females underwent telemetric transmitter implantation for blood pressure (BP) measurements. Mice were cross-bred: hAGT × hREN for RAS preeclamptic model and pregnant controls (WT × WT). Blood and urine collected on days (GD) 12, 15, and 18. Vascular reactivity in mesenteric arteries investigated by wire myography using KCl, acetylcholine (ACH), phenylephrine (PE). ELISA performed on urine for albumin and on plasma for VEGF and sFlt-1. Necropsies were performed GD 18-19. Kidneys and placenta were sectioned for HE and immunostain. Results 11 RAS pregnancies and 9 WT pregnancies (WTP) compared. 12,414 h of BP data analyzed. RAS mice demonstrated higher BP and proteinuria. RAS mice had glomerular endotheliosis (80% vs. 11%; p = 0.02), and placental necrosis (60% vs. 0%; p Conclusions While RAS model of preeclampsia recapitulates human preeclamptic state with high fidelity, renal injury may actually be mediated by increased VEGF binding. Disclosures J.M. Denney: None. C.E. Shaw: None. A. Gendron-Fitzpatrick: None. I. Bird: None. D. Shah: None.
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- 2015
12. 626: Mechanism of renal injury in RAS preeclampsia model
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Annette Gendron-Fitzpatrick, Cynthia E. Shaw, Jeff Denney, and Dinesh Shah
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Renal injury ,Mechanism (biology) ,business.industry ,medicine ,Obstetrics and Gynecology ,medicine.disease ,Bioinformatics ,business ,Preeclampsia - Published
- 2013
13. Comparison of a physical model and principal component analysis for the diagnosis of epithelial neoplasias in vivo using diffuse reflectance spectroscopy
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Nirmala Ramanujam, Kristin M. Vrotsos, Gregory M. Palmer, Melissa C. Skala, and Annette Gendron-Fitzpatrick
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Diffuse reflectance infrared fourier transform ,business.industry ,Chemistry ,Monte Carlo method ,medicine.disease ,Article ,Atomic and Molecular Physics, and Optics ,Optics ,Nuclear magnetic resonance ,Dysplasia ,In vivo ,Attenuation coefficient ,Principal component analysis ,medicine ,Diffuse reflection ,business ,Spectroscopy - Abstract
We explored the use of diffuse reflectance spectroscopy in the ultraviolet-visible (UV-VIS) spectrum for the diagnosis of epithelial precancers and cancers in vivo. A physical model (Monte Carlo inverse model) and an empirical model (principal component analysis, (PCA)) based approach were compared for extracting diagnostic features from diffuse reflectance spectra measured in vivo from the dimethylbenz[alpha]anthracene-treated hamster cheek pouch model of oral carcinogenesis. These diagnostic features were input into a support vector machine algorithm to classify each tissue sample as normal (n=10) or neoplastic (dysplasia to carcinoma, n=10) and cross-validated using a leave one out method. There was a statistically significant decrease in the absorption and reduced scattering coefficient at 460 nm in neoplastic compared to normal tissues, and these two features provided 90% classification accuracy. The first two principal components extracted from PCA provided a classification accuracy of 95%. The first principal component was highly correlated with the wavelength-averaged reduced scattering coefficient. Although both methods show similar classification accuracy, the physical model provides insight into the physiological and structural features that discriminate between normal and neoplastic tissues and does not require a priori, a representative set of spectral data from which to derive the principal components.
- Published
- 2007
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