247 results on '"Yu, Na"'
Search Results
2. Pathogenesis and genetic characteristics of a novel reassortant low pathogenic avian influenza A(H7N6) virus isolated in Cambodia in 2019
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Seo Yun Hong, Dong-Hun Lee, Ji-Ho Lee, Soo-Jeong Kye, Sothyra Tum, Yoon-Gi Baek, Jae-In Shin, Yu-Na Lee, Youn-Jeong Lee, Seng Bunnary, Young-Jae Si, Myoung-Heon Lee, and Min-Ji Park
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China ,animal diseases ,viruses ,Biology ,Influenza A Virus, H7N9 Subtype ,medicine.disease_cause ,Virus ,Rodent Diseases ,Pathogenesis ,Mice ,medicine ,Animals ,Gene ,Phylogeny ,Whole genome sequencing ,Mice, Inbred BALB C ,Avian influenza virus ,General Veterinary ,General Immunology and Microbiology ,Phylogenetic tree ,virus diseases ,General Medicine ,Virology ,Low pathogenic ,Influenza A virus subtype H5N1 ,Ducks ,Influenza in Birds ,Cambodia ,Chickens ,Reassortant Viruses - Abstract
The first human case of zoonotic A(H7N4) avian influenza virus (AIV) infection was reported in early 2018 in China. Two months after this case, novel A(H7N4) viruses phylogenetically related to the Jiangsu isolate emerged in ducks from live bird markets in Cambodia. During active surveillance in Cambodia, a novel A(H7N6) reassortant of the zoonotic low pathogenic AIV (LPAIV) A(H7N4) was detected in domestic ducks at a slaughterhouse. Complete genome sequencing and phylogenetic analysis showed that the novel A(H7N6) AIV is a reassortant, in which four gene segments originated from Cambodia A(H7N4) viruses and four gene segments originated from LPAIVs in Eurasia. Animal infection experiments revealed that chickens transmitted the A(H7N6) virus via low-level direct contacts, but ducks did not. Although avian-origin A(H7Nx) LPAIVs do not contain the critical mammalian-adaptive substitution (E627K) in PB2, the lethality and morbidity of the A(H7N6) virus in BALB/c mice were similar to those of A(H7N9) viruses, suggesting potential for interspecies transmission. Our study reports the emergence of a new reassortant of zoonotic A(H7N4) AIVs with novel viral characteristics and emphasizes the need for ongoing surveillance of avian-origin A(H7Nx) viruses.
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- 2021
3. Nitric Oxide Produced by the Antioxidant Activity of Verapamil Improves the Acute Wound Healing Process
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Jong Won Rhie, Su Jin Lee, Suk-Ho Moon, Yoon Jae Lee, Jang Youn Choi, Ki Joo Kim, and Yu Na Han
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Vascular Endothelial Growth Factor A ,Angiogenesis ,0206 medical engineering ,Biomedical Engineering ,Medicine (miscellaneous) ,02 engineering and technology ,Pharmacology ,Nitric Oxide ,Fibroblast growth factor ,Antioxidants ,Nitric oxide ,03 medical and health sciences ,chemistry.chemical_compound ,Western blot ,Enos ,medicine ,Animals ,030304 developmental biology ,Wound Healing ,0303 health sciences ,integumentary system ,medicine.diagnostic_test ,biology ,Chemistry ,Endothelial Cells ,biology.organism_classification ,020601 biomedical engineering ,Rats ,Vascular endothelial growth factor ,Verapamil ,Original Article ,Wound healing ,medicine.drug - Abstract
BACKGROUND: Verapamil is used in the treatment of hypertension, angina pectoris, cardiac arrhythmia, hypertrophic scars, and keloids to block transmembrane calcium ion flux. Verapamil has antioxidant activity, which enhances the production of nitric oxide (NO). NO promotes the proliferation of fibroblasts, keratinocytes, endothelial cells, and epithelial cells during wound healing. In this study, we investigated the effect of verapamil and its antioxidant properties on the enhancement of acute wound healing via NO. METHODS: A full-thickness wound healing model was created on the rat dorsal with a silicone ring. The wound closure rate was estimated every 2 days for 14 days. A histological study was performed to evaluate wound healing. Immunofluorescence staining was analyzed for angiogenesis. The expressions of collagen type I (COL I), collagen type III (COL III), and vascular endothelial growth factor (VEGF) were assessed by Western blot. Real-time polymerase chain reaction (qRT-PCR) was performed to examine the expression of endothelial NO synthase and inducible NO synthase, which are related to antioxidant activity in the process of wound healing. RESULTS: The wound closure rate was faster in the verapamil group compared to the control and silicone groups. Histologic analysis revealed capillaries and stratum basale in the verapamil group. Immunofluorescence staining was shown vessel formation in the verapamil group. Western blot and qRT-PCR analysis revealed high expression levels of COL I, VEGF, eNOS, and FGF in the verapamil. CONCLUSION: Verapamil’s antioxidant activity enhances NO production in acute wound healing. We suggest that verapamil can be used to promote acute wound healing.
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- 2021
4. Cross protection by inactivated recombinant influenza viruses containing chimeric hemagglutinin conjugates with a conserved neuraminidase or M2 ectodomain epitope
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Youri Lee, Yu-Jin Jung, Bo Ryoung Park, Sang-Moo Kang, Judy Oh, Subbiah Jeeva, Min Chul Kim, Yu-Na Lee, and Ki-Hye Kim
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Influenza vaccine ,Cross Protection ,Recombinant Fusion Proteins ,viruses ,Neuraminidase ,Hemagglutinin (influenza) ,Hemagglutinin Glycoproteins, Influenza Virus ,Biology ,Antibodies, Viral ,Recombinant virus ,Article ,Virus ,Epitope ,law.invention ,Viral Matrix Proteins ,Epitopes ,Mice ,03 medical and health sciences ,Influenza A Virus, H1N1 Subtype ,Orthomyxoviridae Infections ,law ,Virology ,Influenza A Virus, H9N2 Subtype ,Animals ,Humans ,030304 developmental biology ,Heterosubtypic immunity ,Immunity, Cellular ,Mice, Inbred BALB C ,0303 health sciences ,Influenza A Virus, H5N1 Subtype ,Influenza A Virus, H3N2 Subtype ,Vaccination ,030302 biochemistry & molecular biology ,Immunity, Humoral ,Vaccines, Inactivated ,Influenza Vaccines ,Recombinant DNA ,biology.protein ,Female ,Reassortant Viruses - Abstract
Influenza virus neuraminidase (NA) contains a universally conserved epitope (NAe, NA(222–230)). However, no studies have reported vaccines targeting this NA conserved epitope and inducing antibodies recognizing NAe. The extracellular domain of M2 (M2e) is considered as an attractive target for a universal influenza vaccine. We generated recombinant influenza H1N1 viruses expressing conserved epitopes in hemagglutinin (HA) molecules: NAe (NAe-HA) or M2e (M2e-HA) within the HA head domain. Inactivated recombinant NAe-HA and M2e-HA viruses were more effective in inducing IgG antibodies specific for an inserted conserved epitope than live recombinant virus. Recombinant inactivated M2e-HA virus vaccination induced cross protection against H3N2 virus with less weight loss compared to NAe-HA and was more effective in inducing humoral and cellular M2e immune responses. This study provides insight into developing recombinant influenza virus vaccines compatible with current platforms to induce antibody responses to conserved poorly immunogenic epitopes.
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- 2020
5. Isolation and characterization of low pathogenic H7N7 avian influenza virus from a red-crowned crane in a zoo in South Korea
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Myoung-Heon Lee, Youn-Jeong Lee, Yu-Ri Park, Sun-Ha Cheon, Young-Jae Si, Soo-Jeong Kye, Yu-Na Lee, and Yoon-Gi Baek
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animal diseases ,Biosecurity ,Influenza A Virus, H7N7 Subtype ,Bird migration ,Zoology ,Biology ,medicine.disease_cause ,DNA barcoding ,Genetic analysis ,Birds ,Feces ,H7N7 ,Republic of Korea ,medicine ,Animals ,Biosecurity measure ,AI surveillance ,lcsh:Veterinary medicine ,General Veterinary ,Host (biology) ,virus diseases ,LPAI in a zoo ,General Medicine ,Isolation (microbiology) ,Influenza A virus subtype H5N1 ,Fecal coliform ,Influenza in Birds ,lcsh:SF600-1100 ,Animals, Zoo ,Research Article - Abstract
Background South Korea conducts annual national surveillance programs to detect avian influenza (AI) in domestic poultry, live bird markets, and wild birds. In March 2017, an AIV was isolated from fecal samples in an outdoor aviary flight cage in a zoo in Korea. Results Nucleotide sequencing identified the isolate as low pathogenic avian influenza virus (LPAIV) H7N7, and DNA barcoding analysis identified the host species as red-crowned crane. This isolate was designated A/red-crowned crane/Korea/H1026/2017 (H7N7). Genetic analysis and gene constellation analysis revealed that A/red-crowned crane/Korea/H1026/2017 (H7N7) showed high similarity with four H7N7 LPAIVs isolated from wild bird habitats in Seoul and Gyeonggi in early 2017. Conclusions Considering the genetic similarity and similar collection dates of the viruses, and the fact that zoo bird cages are vulnerable to AIV, it is likely that fecal contamination from wild birds might have introduced LPAIV H7N7 into the red-crowned crane at the zoo. Therefore, our results emphasize that enhanced biosecurity measures should be employed during the wild bird migration season, and that continued surveillance should be undertaken to prevent potential threats to avian species in zoos and to humans.
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- 2020
6. Enhancement of Drought-Stress Tolerance ofBrassica oleraceavar.italicaL. by Newly IsolatedVariovoraxsp. YNA59
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Yu-Na Kim, Muhammad Aaqil Khan, Sang-Mo Kang, Muhammad Hamayun, and In-Jung Lee
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0106 biological sciences ,Rhizosphere ,biology ,Jasmonic acid ,fungi ,Drought tolerance ,food and beverages ,General Medicine ,APX ,01 natural sciences ,Applied Microbiology and Biotechnology ,Superoxide dismutase ,chemistry.chemical_compound ,Horticulture ,chemistry ,Catalase ,010608 biotechnology ,biology.protein ,Abscisic acid ,Salicylic acid ,Biotechnology - Abstract
Drought is a major abiotic factor and has drastically reduced crop yield globally, thus damaging the agricultural industry. Drought stress decreases crop productivity by negatively affecting crop morphological, physiological, and biochemical factors. The use of drought tolerant bacteria improves agricultural productivity by counteracting the negative effects of drought stress on crops. In this study, we isolated bacteria from the rhizosphere of broccoli field located in Daehaw-myeon, Republic of Korea. Sixty bacterial isolates were screened for their growth-promoting capacity, in vitro abscisic acid (ABA), and sugar production activities. Among these, bacterial isolates YNA59 was selected based on their plant growth-promoting bacteria traits, ABA, and sugar production activities. Isolate YNA59 highly tolerated oxidative stress, including hydrogen peroxide (H2O2) and produces superoxide dismutase (SOD), catalase (CAT), and ascorbate peroxidase (APX) activities in the culture broth. YNA59 treatment on broccoli significantly enhanced plant growth attributes, chlorophyll content, and moisture content under drought stress conditions. Under drought stress, the endogenous levels of ABA, jasmonic acid (JA), and salicylic acid (SA) increased; however, inoculation of YNA59 markedly reduced ABA (877 ± 22 ng/g) and JA (169.36 ± 20.74 ng/g) content, while it enhanced SA levels (176.55 ± 9.58 ng/g). Antioxidant analysis showed that the bacterial isolate YNA59 inoculated into broccoli plants contained significantly higher levels of SOD, CAT, and APX, with a decrease in GPX levels. The bacterial isolate YNA59 was therefore identified as Variovorax sp. YNA59. Our current findings suggest that newly isolated drought tolerant rhizospheric Variovorax sp. YNA59 is a useful stress-evading rhizobacterium that improved droughtstress tolerance of broccoli and could be used as a bio-fertilizer under drought conditions.
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- 2020
7. Phospholipase <scp>D1</scp> inhibition sensitizes glioblastoma to temozolomide and suppresses its tumorigenicity
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Kang Seo Park, Yu Na Noh, Won Chan Hwang, Do Sik Min, and Dong Woo Kang
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Male ,0301 basic medicine ,Carcinogenesis ,miRNA‐320a/‐4496 ,Mice, SCID ,temozolomide ,medicine.disease_cause ,Mice ,0302 clinical medicine ,Mice, Inbred NOD ,phospholipase D1 ,temozolomide resistance factor ,education.field_of_study ,biology ,Brain Neoplasms ,Original Papers ,Up-Regulation ,Hyaluronan Receptors ,030220 oncology & carcinogenesis ,Stem cell ,Phospholipase D1 ,medicine.drug ,Population ,Down-Regulation ,Pathology and Forensic Medicine ,03 medical and health sciences ,Downregulation and upregulation ,Cell Line, Tumor ,microRNA ,Biomarkers, Tumor ,Phospholipase D ,medicine ,Animals ,Humans ,education ,Antineoplastic Agents, Alkylating ,neoplasms ,Original Paper ,Temozolomide ,business.industry ,CD44 ,glioblastoma ,nervous system diseases ,Mice, Inbred C57BL ,MicroRNAs ,030104 developmental biology ,Drug Resistance, Neoplasm ,biology.protein ,Cancer research ,business ,Neoplasm Transplantation - Abstract
Resistance of glioblastoma to the chemotherapeutic compound temozolomide is associated with the presence of glioblastoma stem cells in glioblastoma and is a key obstacle for the poor prognosis of glioblastoma. Here, we show that phospholipase D1 is elevated in CD44High glioblastoma stem cells and in glioblastoma, especially recurring glioblastoma. Phospholipase D1 elevation positively correlated with the level of CD44 and poor prognosis in glioblastoma patients. Temozolomide significantly upregulated the expression of phospholipase D1 in the low and moderate CD44 populations of glioblastoma stem cells, but not in the CD44High population in which phospholipase D1 is highly expressed. Phospholipase D1 conferred resistance to temozolomide in CD44High glioblastoma stem cells and increased their self‐renewal capacity and maintenance. Phospholipase D1 expression significantly correlated with levels of temozolomide resistance factors, which were suppressed by microRNA‐320a and ‐4496 induced by phospholipase D1 inhibition. Genetic and pharmacological targeting of phospholipase D1 attenuated glioblastoma stem cell‐derived intracranial tumors of glioblastoma using the microRNAs, and improved survival. Treatment solely with temozolomide produced no benefits on the glioblastoma, whereas in combination, phospholipase D1 inhibition sensitized glioblastoma stem cells to temozolomide and reduced glioblastoma tumorigenesis. Together, these findings indicate that phospholipase D1 inhibition might overcome resistance to temozolomide and represents a potential treatment strategy for glioblastoma. © 2020 The Authors. The Journal of Pathology published by John Wiley & Sons, Ltd. on behalf of The Pathological Society of Great Britain and Ireland.
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- 2020
8. Reduced stress responses by <scp>MS</scp> ‐222 in juvenile silver pomfret ( Pampus argenteus )
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Xiaojun Yan, Gu Weiwei, Cao Xiaohuan, Yajun Wang, Yu Na, Yibo Sun, Kuang Siwen, Hu Jiabao, Yang Yang, Shanliang Xu, and Zhang Man
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Pomfret ,Plasma cortisol ,biology ,Zoology ,Juvenile ,Aquatic Science ,Pampus argenteus ,biology.organism_classification ,Agronomy and Crop Science - Published
- 2020
9. Genetic characteristics and pathogenesis of H5 low pathogenic avian influenza viruses from wild birds and domestic ducks in South Korea
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Yoon-Gi Baek, Sun-Ha Cheon, You-Chan Bae, Myoung-Heon Lee, Dong-Hun Lee, Eun Kyoung Lee, Youn-Jeong Lee, Yu-Ri Park, Young-Jae Si, Gyeong-Beom Heo, Yu-Na Lee, and Soo-Jeong Kye
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0301 basic medicine ,Genotype ,Molecular biology ,Science ,030106 microbiology ,Zoology ,Hemagglutinin (influenza) ,Animals, Wild ,Biology ,medicine.disease_cause ,Microbiology ,Article ,Birds ,03 medical and health sciences ,Phylogenetics ,Republic of Korea ,Genetic variation ,medicine ,Animals ,Amino Acid Sequence ,Phylogeny ,Genetic diversity ,Multidisciplinary ,Phylogenetic tree ,Strain (biology) ,Genetic Variation ,Influenza A virus subtype H5N1 ,Ducks ,Hemagglutinins ,030104 developmental biology ,Influenza A virus ,Animals, Domestic ,Influenza in Birds ,Mutation ,biology.protein ,Medicine - Abstract
H5 and H7 subtypes of low pathogenic avian influenza viruses (LPAIVs) can mutate to highly pathogenic forms and are therefore subject to stringent controls. We characterized H5 LPAIVs isolated from wild-bird habitats and duck farms in South Korea from 2010 to 2017. Through nationwide active surveillance for AIVs, 59 H5 LPAIVs were isolated from wild-bird habitats (a mean annual rate of 5.3% of AIV isolations). In 2015, one LPAI H5N3 strain was isolated on a duck farm. Phylogenetic analysis revealed that the hemagglutinin (HA) gene of H5 isolates belonged to the Eurasian lineage, classified into three subgroups (HA-II, HA-III, and HA-IV). The H5 LPAIVs of the HA-III and HA-IV subgroups appeared in 2015 and 2017 in unusually high proportions (13.1% and 14.4%, respectively). In gene-constellation analysis, H5 LPAIVs isolated from 2015 to 2017 constituted ≥ 35 distinct genotypes, representing high levels of genetic diversity. Representative strains of three HA subgroups replicated restrictively in specific-pathogen-free chickens. Among the 11 isolates that were tested, 10 infected and replicated in mice without prior adaptation. The frequency of recent H5 LPAIV isolates with high genetic diversity indicates the importance of continued surveillance in both wild birds and poultry to monitor genetic and pathobiological changes.
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- 2020
10. Isolation and Characterization of Rhodococcus sp. Strains Capable of Degrading Benzimidazole Fungicides Benomyl and Carbendazim
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Jae-Cheol Lee, Yu-Na Jeon, Jaehong You, Si-Hyun An, Chang-Muk Lee, Myoung-Hwa Jung, Yu-Jin Kim, Jae-Hyung Ahn, Byeong-Hak Han, and InCheol Park
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Fungicide ,chemistry.chemical_compound ,Benzimidazole ,biology ,Chemistry ,Carbendazim ,Benomyl ,Biodegradation ,Isolation (microbiology) ,biology.organism_classification ,Rhodococcus sp ,Bacteria ,Microbiology - Published
- 2020
11. Investigating structural impact of a valine to isoleucine substitution on anti-Müllerian hormone in silico and genetic association of the variant and AMH expression with egg production in chickens
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Wen-yan Zhao, Yu-na Min, Li-ping Dang, Rui-fang Liu, Wen-xin Zhou, and Zhepeng Wang
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0106 biological sciences ,endocrine system ,chicken ,Agriculture (General) ,In silico ,Plant Science ,Quantitative trait locus ,01 natural sciences ,Biochemistry ,S1-972 ,Andrology ,Food Animals ,Valine ,Missense mutation ,Genetic association ,Ecology ,biology ,urogenital system ,Anti-Müllerian hormone ,egg production ,04 agricultural and veterinary sciences ,Transmission disequilibrium test ,anti-Müllerian hormone ,embryonic structures ,040103 agronomy & agriculture ,biology.protein ,0401 agriculture, forestry, and fisheries ,Animal Science and Zoology ,Isoleucine ,follicle recruitment ,Agronomy and Crop Science ,010606 plant biology & botany ,Food Science - Abstract
Anti-Mullerian hormone (AMH) acts in maintaining orderly cyclic recruitment of early follicles, suggesting that it is a promising candidate for influencing animal reproductive efficiency. This study aimed to elucidate the effect of a missense mutation of Val566Ile on the structure of AMH protein and the genetic association of Val566Ile and AMH expression with egg production in chickens. Structural perturbations of Val566Ile were predicted by homology modeling. The association of the variant with the number of eggs was tested using a quantitative trait transmission disequilibrium test model. AMH expression in granulosa cells in Lueyang black-boned chickens was compared with that in Nick chickens. The Val566 of AMH is a non-conservative amino acid among mammals and birds, but its hydrophobicity is completely conservative. The substitution of Val566 for Ile566 potentially disrupted hydrogen bonds and solvent accessibility of 22 residues and created a short α-helix in the C terminus of AMH. Despite having striking structure-disrupting potential, the variant was not statistically associated with the number of eggs (P>0.05) in the Lueyang black-boned chickens. We did not detect differential expression of AMH between Lueyang black-boned chickens and Nick chickens (P>0.05). These results confirmed the structural impact of Val566Ile, but suggested that Val566Ile and AMH expression might not be the major genetic determinants for egg production in Lueyang black-boned chickens.
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- 2020
12. Distribution and characteristics of geosmin and 2-MIB-producing actinobacteria in the Han River, Korea
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Jong-Soon Jung, Eun-Sook Lee, Bogsoon Kim, Yeoung-Seop Cha, Yu-Na Kim, and Sae-Bom Kim
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biology ,business.industry ,0207 environmental engineering ,Distribution (economics) ,02 engineering and technology ,010501 environmental sciences ,biology.organism_classification ,complex mixtures ,01 natural sciences ,Geosmin ,Actinobacteria ,chemistry.chemical_compound ,fluids and secretions ,chemistry ,Environmental chemistry ,bacteria ,Environmental science ,020701 environmental engineering ,business ,0105 earth and related environmental sciences ,Water Science and Technology - Abstract
Actinobacteria can be one of the causes of earthy and musty odors in drinking water. In this study, the distribution and odor producing ability of actinobacteria isolated in the Han River as a source of tap water were investigated. Actinobacteria were detected in low concentration from December to February and this gradually increased in March and April. The number of actinobacteria detected was particularly high in April (63 CFU/mL), July (45 CFU/mL), and October (39 CFU/mL) due to the influence of rainfall. Actinobacteria with geosmin-producing genes were detected mainly in March and July. In contrast, actinobacteria with 2-MIB-producing genes were detected mainly in October. There was a difference in the time when actinobacteria with the geosmin and 2-MIB-producing gene were highly detected in the river. Also, the types of actinobacteria with the geosmin and 2-MIB-producing gene were different. More than 70% of the geosmin inducer gene was isolated in Streptomyces, but the 2-MIB inducer gene was detected in various genera of actinobacteria as well as Streptomyces. The detection of odorous substances in March and October when cyanobacteria were not detected, or the detected number was low, suggested that actinobacteria could be a cause of odor inducers in the Han River.
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- 2020
13. Synthesis of (-)-epigallocatechin-3-gallate derivative containing a triazole ring and combined with cisplatin/paclitaxel inhibits NSCLC cancer cells by decreasing phosphorylation of the EGFR
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Xuan-Jun Wang, Yu-Na Wang, Jing Wang, Jun Sheng, Hao-Nang Yang, Cheng-Ting Zi, Qi Wang, Ning Zhang, Pei-Yuan Sun, and Han Tang
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Chemotherapy ,biology ,medicine.medical_treatment ,Wild type ,Triazole ,General Chemistry ,Gallate ,medicine.disease ,chemistry.chemical_compound ,chemistry ,Cancer cell ,medicine ,Cancer research ,biology.protein ,Phosphorylation ,Epidermal growth factor receptor ,Lung cancer - Abstract
Non-small-cell lung cancer is one of the principal causes of cancer-related death around the world. Chemotherapy is commonly used to treat wild type of epidermal growth factor receptor non-small-cell lung cancer. (-)-Epigallocatechin-3-gallate is the most abundant and active catechin. However, (-)-epigallocatechin-3-gallate has limited clinical application due to its poor stability and absorption. Herein, we report that a glycosylated azide undergoes a click reaction with the terminal alkyne of (-)-epigallocatechin-3-gallate to yield a triazole-linked glucose-(-)-epigallocatechin-3-gallate derivative and have evaluated its in vitro anticancer activity against human non-small-cell lung cancer cells using the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide assay. The product inhibits human non-small-cell lung cancer cell lines with wild type of epidermal growth factor receptor and in combination with cisplatin/paclitaxel results in more pronounced proliferation inhibition than when used alone. Stability investigations indicates that the conjugated glucose residue can improve the stability of the (-)-epigallocatechin-3-gallate scaffold. Our studies suggest that the combination of the glucose-(-)-epigallocatechin-3-gallate derivative and chemotherapeutic drugs may provide a novel strategy for the treatment of non-small-cell lung cancer.
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- 2020
14. A Study on the Quality Characteristics of Low-Salt Chicken Patties with Pleurotus eryngii and Konjac
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Tae-Kyung Kim, Jong-Dae Park, Jung-Min Sung, Hae In Yong, Su-Kyung Ku, Yun-Sang Choi, and Yu-Na Hwang
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biology ,Chemistry ,Low salt ,General Earth and Planetary Sciences ,Pleurotus eryngii ,Food science ,Konjac glucomannan ,Quality characteristics ,biology.organism_classification ,General Environmental Science - Published
- 2020
15. Upregulation of PUM1 Expression in Preeclampsia Impairs Trophoblast Invasion by Negatively Regulating the Expression of the lncRNA HOTAIR
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Yu-Na Guo, Fan Wu, Yi Lin, Xiao-Ying He, Shi Qin, Xing Li, Ya-Qing Peng, Jing Zhang, Hui-Qin Mo, Yan Zhang, Lin Mao, Xiao Li, and Fu-Ju Tian
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PUM1 ,RNA Stability ,Biology ,Cell Line ,03 medical and health sciences ,0302 clinical medicine ,Pre-Eclampsia ,Downregulation and upregulation ,Cell Movement ,Pregnancy ,Drug Discovery ,Gene expression ,Genetics ,medicine ,Humans ,Molecular Biology ,Gene ,Cells, Cultured ,Cell Proliferation ,030304 developmental biology ,Pharmacology ,0303 health sciences ,Gene knockdown ,Messenger RNA ,Gene Expression Profiling ,RNA-Binding Proteins ,Trophoblast ,HOTAIR ,Immunohistochemistry ,Trophoblasts ,Cell biology ,medicine.anatomical_structure ,Gene Expression Regulation ,030220 oncology & carcinogenesis ,embryonic structures ,Molecular Medicine ,Original Article ,Female ,RNA, Long Noncoding - Abstract
Pumilio (PUM) proteins are members of a highly conserved RNA-binding protein family that posttranscriptionally regulate gene expression in many organisms. However, their roles in the placenta are unclear. In the present study, we report the requirement for the PUM homolog 1 (PUM1) gene in preeclampsia (PE). Immunofluorescence and immunohistochemical data showed that PUM1 was highly expressed in human placental villi from women with PE compared to healthy controls (HCs). Further, PUM1 overexpression repressed, and knockdown enhanced, the invasion and proliferation of trophoblasts. Interestingly, PUM1 knockdown promoted trophoblast invasion in a villous explant culture model, while PUM1 overexpression repressed these effects. Furthermore, lncRNA transcriptome sequencing coupled with RNA immunoprecipitation (RIP) revealed that PUM1 inhibits trophoblast invasion in PE by downregulating the expression of lncRNA HOTAIR. Moreover, PUM1 regulates HOTAIR expression via a posttranscriptional mechanism. Using RNA-protein pull-down and mRNA stability assays, we identified PUM1 as a specific binding partner that decreased the half-life of HOTAIR and lowered the steady-state level of HOTAIR expression, suggesting a novel posttranscriptional regulatory mechanism. Collectively, these findings identified a novel RNA regulatory mechanism, revealing a new pathway governing the regulation of PUM1/HOTAIR in trophoblast invasion in the pathogenesis of PE.
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- 2020
16. Genetic and pathogenic characteristics of clade 2.3.2.1c H5N1 highly pathogenic avian influenza viruses isolated from poultry outbreaks in Laos during 2015–2018
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Watthana Theppangna, Young-Jae Si, Youn-Jeong Lee, Yu-Na Lee, Soo-Jeong Kye, Yu-Ri Park, Choi-Kyu Park, Myoung-Heon Lee, Bounlom Douangngeun, Phetlamphone Meeduangchanh, Dong-Hun Lee, and Yoon-Gi Baek
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Genotype ,040301 veterinary sciences ,medicine.drug_class ,Biology ,medicine.disease_cause ,Poultry ,Virus ,Disease Outbreaks ,0403 veterinary science ,03 medical and health sciences ,Influenza A virus ,medicine ,Animals ,Clade ,Phylogeny ,Poultry Diseases ,030304 developmental biology ,0303 health sciences ,Influenza A Virus, H5N1 Subtype ,General Veterinary ,General Immunology and Microbiology ,Phylogenetic tree ,Neuraminidase inhibitor ,Outbreak ,04 agricultural and veterinary sciences ,General Medicine ,Virology ,Influenza A virus subtype H5N1 ,Specific Pathogen-Free Organisms ,Laos ,Influenza in Birds ,Chickens - Abstract
Since 2004, there have been multiple outbreaks of H5 highly pathogenic avian influenza (HPAI) viruses in Laos. Here, we isolated H5N1 HPAI viruses from poultry outbreaks in Laos during 2015-2018 and investigated their genetic characteristics and pathogenicity in chickens. Phylogenetic analysis revealed that the isolates belonged to clade 2.3.2.1c and that they differed from previous Laos viruses with respect to genetic composition. In particular, the isolates were divided into two genotypes, each of which had a different NS segments. The results of possible migration analysis suggested a high likelihood that the Laos isolates were introduced from neighbouring countries, particularly Vietnam. The recent Laos isolate, A/Duck/Laos/NL-1504599/2018, had an intravenous pathogenicity index score of 3.0 and showed a 50% chicken lethal dose of 102.5 EID50 /0.1 ml, indicating high pathogenicity. The isolated viruses exhibited no critical substitution in the markers associated with mammalian adaptation, but possess markers related to neuraminidase inhibitor resistance. These results emphasize the need for ongoing surveillance of circulating influenza virus in South-East Asia, including Laos, to better prepare for and mitigate global spread of H5 HPAI.
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- 2019
17. Retinol-binding protein 4, fetal overgrowth and fetal growth factors
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Shanghai Birth Cohort, Guang-Hui Zhang, Xiaolin Hua, Meng-Nan Yang, Yu Dong, Yu-Na Guo, Huei-Chen Chiu, Hua He, Zhong-Cheng Luo, Fengxiu Ouyang, Jun Zhang, Wen-Juan Wang, and Kun Du
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endocrine system ,medicine.medical_specialty ,Retinol binding protein 4 ,biology ,business.industry ,Birth weight ,Insulin ,medicine.medical_treatment ,Growth factor ,Adipokine ,Gestational age ,03 medical and health sciences ,0302 clinical medicine ,Endocrinology ,030225 pediatrics ,Cord blood ,Internal medicine ,Pediatrics, Perinatology and Child Health ,biology.protein ,Medicine ,business ,030217 neurology & neurosurgery ,Proinsulin - Abstract
Retinol-binding protein 4 (RBP-4) is an adipokine involved in regulating insulin sensitivity which would affect fetal growth. It is unclear whether RBP-4 is associated with fetal overgrowth, and unexplored which fetal growth factor(s) may mediate the association. In the Shanghai Birth Cohort, we studied 125 pairs of larger-for-gestational-age (LGA, birth weight >90th percentile, an indicator of fetal overgrowth) and optimal-for-gestational-age (OGA, 25–75th percentiles) control infants matched by sex and gestational age. We measured cord blood concentrations of RBP-4, insulin, proinsulin, insulin-like growth factor-I (IGF-I), and IGF-II. Cord blood RBP-4 concentrations were elevated in LGA vs. OGA infants (21.9 ± 6.2 vs. 20.2 ± 5.1 µg/ml, P = 0.011), and positively correlated with birth weight z score (r = 0.19, P = 0.003), cord blood proinsulin (r = 0.21, P
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- 2019
18. Pathogenesis and genetic characteristics of low pathogenic avian influenza H10 viruses isolated from migratory birds in South Korea during 2010-2019
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Min-Ji Park, Yoon-Gi Baek, Kwang-Nyeong Lee, Young-Jae Si, Yu-Na Lee, Eun Kyoung Lee, Hye-Ryung Kim, Youn-Jeong Lee, and Yu-Ri Park
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Population ,Hemagglutinin (influenza) ,Animals, Wild ,medicine.disease_cause ,Poultry ,Rodent Diseases ,Mice ,Genotype ,Pandemic ,medicine ,Animals ,Humans ,Trypsin ,Viral shedding ,education ,Phylogeny ,education.field_of_study ,Genetic diversity ,General Veterinary ,General Immunology and Microbiology ,biology ,Strain (biology) ,General Medicine ,Virology ,Influenza A virus subtype H5N1 ,Hemagglutinins ,Influenza A virus ,Influenza in Birds ,biology.protein ,Chickens - Abstract
Human infection by avian-origin subtype H10 influenza viruses has raised concerns about the pandemic potential of these microbes. H10 subtype low pathogenic avian influenza viruses (LPAIVs) have been isolated from wild birds and poultry worldwide. Here, we isolated 36 H10 LPAIVs from wild bird habitats (a mean annual rate of 3.8% of all avian influenza virus isolations) from January 2010 to April 2019 through a nationwide active surveillance program for avian influenza viruses (AIVs). Phylogenetic analysis revealed that the hemagglutinin (HA) gene of H10 isolates formed eight distinct genetic subgroups (HA-A-H). Unlike other Eurasian-origin subgroups, the HA-H subgroup belonged to the North American lineage. Gene-constellation analysis revealed that 24 H10 LPAIVs constituted ≥18 distinct genotypes, representing high levels of genetic diversity. An intravenous pathogenicity index (IVPI) experiment showed that the pathogenicity of representative strains of the HA-B, E, and G subgroups possessing an IVPI score > 1.2 was associated with replication capacity in the chicken kidney in the absence of trypsin. Intranasal inoculation experiments showed that a representative strain of the HA-D subgroup replicated and transmitted in chickens without clinical signs. Subclinical virus shedding in chickens may contribute to its silent spread among the poultry population. Moreover, six representative viruses replicated in the lungs of mice without prior adaptation and a representative strain of the HA-C subgroup caused 40% mortality, with severe body weight loss. These findings highlight the importance of intensive surveillance of wild bird habitats, poultry farms, and the animal-human interface, along with appropriate risk assessment of isolated viruses. This article is protected by copyright. All rights reserved.
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- 2021
19. Estimation of Genetic Parameters for Feeding Pattern Traits and Its Relationship to Feed Efficiency and Production Traits in Duroc Pigs
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Yu-Na Song, Bryan Irvine Lopez, Sung Hoon Kim, Kier Gumangan Santiago, Kang-Seok Seo, Young-Gyu Cho, and Donghui Lee
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Restricted maximum likelihood ,Agriculture (General) ,Plant Science ,Heritability ,Biology ,heritability ,Loin ,Feed conversion ratio ,Genetic correlation ,genetic correlation ,Total variability ,S1-972 ,Correlation ,Animal science ,Residual feed intake ,Duroc pigs ,Agronomy and Crop Science ,feeding pattern ,Food Science - Abstract
This study was conducted to estimate the genetic parameters of different feeding pattern traits, including average daily feed intake (ADFI), average occupation time per day (AOTD), average occupation time per visit (AOTV), average daily feeding rate (ADFR), average feeding rate per feeding visit (AFRV), average feed intake per feeding visit (AFIV), and average number of visits per day (ANVD), and their genetic relationship to production traits, such as on-test average daily gain (ADG), backfat thickness (BFT), loin muscle area (LMA), lean percentage (LP), and feed efficiency traits, such as feed conversion ratio (FCR) and five measures of residual feed intake (RFI1 to RFI5), in Duroc pigs (DD). The non-heritable common spatial pen effect was also estimated in all studied traits. The feeding pattern traits used in this study were derived from filtered feeding visits of 602 DD pigs. Using three animal models and the REML method, the genetic parameters revealed low to moderate heritability for ADFI (0.19 to 0.32) and AFIV (0.18 to 0.33), moderate heritability for ANVD (0.28 to 0.35) and AOTV (0.21 to 0.31), and high heritability for AOTD (0.73), ADFR (0.62 to 0.64), and AFRV (0.59 to 0.63). The addition of a common spatial pen effect in models 2 and 3 had a substantial impact, ranging from 8% to 23%, on the total variability of most feeding pattern traits, with the exception of AOTD, which only had a percentage variance of 0.30% due to the pen effect. The genetic and phenotypic correlation revealed that ADFI had consistent moderate to high genetic and phenotypic correlation with production and feed efficiency (FE) traits. However, selection against ADFI would negatively affect on-test ADG. Interestingly, the AOTD had no genetic correlation with ADG (0.04), low to moderate positive genetic correlation with FCR (0.27) and all RFI measures (0.24 to 0.33), and moderate negative correlation with LP (−0.39), indicating that selection for DD pigs with lower AOTD would not influence on-test ADG but may increase LP and improve feed efficiency by lowering FCR and all RFI measures. However, the corresponding phenotypic correlation of AOTD with production and feed efficiency traits was mostly weak, which can be attributed to the low residual or environmental correlation between these correlated traits. At the genetic level, the feeding pattern traits showed potential in improving feed efficiency and production traits. However, further studies are needed to evaluate their impact at phenotypic level.
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- 2021
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20. The Identification and Genetic Characterization of Parechovirus Infection Among Pediatric Patients With Wide Clinical Spectrum in Chongqing, China
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Xiao-Ai Zhang, Rui-Qiu Zhao, Jin-Jin Chen, Yang Yuan, Xiang Tang, Zi-Wei Zhou, Luo Ren, Qin-Bin Lu, Yu-Na Wang, Hai-Yang Zhang, Pan-He Zhang, Li-Qun Fang, Hai-Sheng Zhou, En-Mei Liu, Hong-Mei Xu, and Wei Liu
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Microbiology (medical) ,medicine.medical_specialty ,hand foot and mouth disease ,medicine.disease_cause ,Microbiology ,respiratory infection ,Internal medicine ,Epidemiology ,Genotype ,medicine ,parechovirus ,Original Research ,biology ,business.industry ,Human parechovirus ,Respiratory infection ,acute diarrhea ,medicine.disease ,biology.organism_classification ,QR1-502 ,Parechovirus ,Coinfection ,Enterovirus ,epidemiology ,business ,Viral load - Abstract
Human parechoviruses (HPeVs) are important causes of infection in children. However, without a comprehensive and persistent surveillance, the epidemiology and clinical features of HPeV infection remain ambiguous. We performed a hospital-based surveillance study among three groups of pediatric patients with acute respiratory infection (Group 1), acute diarrhea (Group 2), and hand, foot and mouth disease (Group 3) in Chongqing, China, from 2009 to 2015. Among 10,212 tested patients, 707 (6.92%) were positive for HPeV, with the positive rates differing significantly among three groups (Group 1, 3.43%; Group 2, 14.94%; Group 3, 3.55%; P < 0.001). The co-infection with other pathogens was detected in 75.2% (531/707) of HPeV-positive patients. Significant negative interaction between HPeV and Parainfluenza virus (PIV) (P = 0.046, OR = 0.59, 95% CI = 0.34–0.98) and positive interactions between HPeV and Enterovirus (EV) (P = 0.015, OR = 2.28, 95% CI = 1.23–4.73) were identified. Among 707 HPeV-positive patients, 592 (83.73%) were successfully sequenced, and 10 genotypes were identified, with HPeV1 (n = 396), HPeV4 (n = 86), and HPeV3 (n = 46) as the most frequently seen. The proportion of genotypes differed among three groups (P < 0.001), with HPeV1 and HPeV4 overrepresented in Group 2 and HPeV6 overrepresented in Group 3. The spatial patterns of HPeV genotypes disclosed more close clustering of the currently sequenced strains than those from other countries/regions, although they were indeed mixed. Three main genotypes (HPeV1, HPeV3, and HPeV4) had shown distinct seasonal peaks, highlighting a bi-annual cycle of all HpeV and two genotypes (HPeV 1 and HPeV 4) with peaks in odd-numbered years and with peaks in even-numbered years HPeV3. Significantly higher HPeV1 viral loads were associated with severe diarrhea in Group 2 (P = 0.044), while associated with HPeV single infection than HPeV-EV coinfection among HFMD patients (P = 0.001). It’s concluded that HPeV infection was correlated with wide clinical spectrum in pediatric patients with a high variety of genotypes determined. Still no clinical significance can be confirmed, which warranted more molecular surveillance in the future.
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- 2021
21. Pathogenicity of H5N8 High Pathogenicity Avian Influenza Virus in Chickens and Ducks from South Korea in 2020–2021
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Yoon-Gi Baek, Soo-Jeong Kye, Gyeong-Beom Heo, Na-Yeong Kim, Eun Kyoung Lee, Ra Mi Cha, Yu-Na Lee, Min-Ji Park, Mingeun Sagong, Youn-Jeong Lee, and Kwang-Nyeong Lee
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Veterinary medicine ,animal structures ,animal diseases ,viruses ,chicken ,Virulence ,high pathogenicity avian influenza ,Mandarin duck ,medicine.disease_cause ,Microbiology ,Virus ,Disease Outbreaks ,Virology ,Republic of Korea ,medicine ,pathogenicity ,Animals ,Influenza A Virus, H5N8 Subtype ,Viral shedding ,Poultry Diseases ,biology ,Inoculation ,Communication ,Outbreak ,virus diseases ,biology.organism_classification ,QR1-502 ,Influenza A virus subtype H5N1 ,Specific Pathogen-Free Organisms ,Virus Shedding ,Titer ,Infectious Diseases ,Ducks ,Influenza A virus ,Influenza in Birds ,Chickens - Abstract
During the 2020–2021 winter season, an outbreak of clade 2.3.4.4b H5N8 high pathogenicity avian influenza (HPAI) virus occurred in South Korea. Here, we evaluated the pathogenicity and transmissibility of A/mandarin duck/Korea/H242/2020 (H5N8) (H242/20(H5N8)) first isolated from this outbreak in specific pathogen-free (SPF) chickens and commercial ducks in comparison with those of A/duck/Korea/HD1/2017(H5N6) (HD1/17(H5N6)) from a previous HPAI outbreak in 2017–2018. In chickens, the 50% chicken lethal dose and mean death time of H242/20(H5N8) group were 104.5 EID50 and 4.3 days, respectively, which indicate less virulent than those of HD1/17(H5N6) (103.6 EID50 and 2.2 days). Whereas, chickens inoculated with H242/20(H5N8) survived longer and had a higher titer of viral shedding than those inoculated with HD1/17(H5N6), which may increase the risk of viral contamination on farms. All ducks infected with either HPAI virus survived without clinical symptoms. In addition, they exhibited a longer virus shedding period and a higher transmission rate, indicating that ducks may play an important role as a silent carrier of both HPAI viruses. These results suggest that the pathogenic characteristics of HPAI viruses in chickens and ducks need to be considered to effectively control HPAI outbreaks in the field.
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- 2021
22. Severe fever with thrombocytopenia syndrome with re-infection in China: a case report
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Zhen-Dong Yang, Shou-Ming Lv, Xiao-Ai Zhang, Ning Cui, Wei Liu, Tong Yang, Chun Yuan, Hao Li, Yu-Na Wang, Ke Dai, Qing-Bin Lu, Zi-Niu Dai, and Lan Zhang
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0301 basic medicine ,Adult ,medicine.medical_specialty ,China ,Severe Fever with Thrombocytopenia Syndrome ,Viremia ,Case Report ,Infectious and parasitic diseases ,RC109-216 ,Tick-borne infectious disease ,Re-infection ,Bunyaviridae Infections ,03 medical and health sciences ,0302 clinical medicine ,Epidemiology ,Medicine ,Humans ,030212 general & internal medicine ,Viral shedding ,Phylogeny ,First episode ,biology ,business.industry ,Public Health, Environmental and Occupational Health ,SFTS virus ,General Medicine ,medicine.disease ,biology.organism_classification ,Virology ,Severe fever with thrombocytopenia syndrome ,030104 developmental biology ,Infectious Diseases ,Infectious disease (medical specialty) ,Reinfection ,biology.protein ,Female ,Public aspects of medicine ,RA1-1270 ,Antibody ,business - Abstract
Background Severe fever with thrombocytopenia syndrome (SFTS), an emerging tickborne infectious disease caused by a novel banyangvirus (SFTS virus, SFTSV), was endemic in several Asian countries with a high mortality up to 30%. Until recently, SFTSV-associated re-infection have not been reported and investigated. Case presentation A 42-year-old female patient was identified as a case of SFTS with re-infection, with two episodes of SFTSV infection on June 2018 and May 2020. The diagnosis of SFTS was confirmed by detection of SFTSV RNA in the blood samples using real-time reverse-transcription polymerase chain reaction and antibodies specific for SFTSV using enzyme linked immunosorbent assay. The changes of viremia and antibody response differed between the two episodes. Phylogenetic analysis showed the two viral genome sequences were in the same clade, but showing 0.6% dissimilarity of the nearly whole nucleotide sequence. Analysis of clinical data revealed that the second episode showed milder illness than that of the first episode. Conclusions Epidemiological and clinical findings, viral whole genomic sequences, and serological evidence, provided evidence for the re-infection of SFTSV rather than prolonged viral shedding or relapse of the original infection. The patients with re-infection of SFTSV may be at high odds of clinically inapparent or mildly symptomatic. More attention should be directed towards the long-term follow up of the recovered patients in the future, to explicitly acquire the decay profile of their immunity response. Graphic abstract
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- 2021
23. Pathogenicity of H9N2 low pathogenic avian influenza viruses of different lineages isolated from live bird markets tested in three animal models: SPF chickens, Korean native chickens, and ducks
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Min-Ji Park, Soo-Jeong Kye, Na-Young Kim, Yu-Na Lee, Yoon-Ki Baek, Gyeong-Beom Heo, Youn-Jeong Lee, Myoung-Heon Lee, and Jae-In Shin
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Lineage (genetic) ,animal structures ,animal diseases ,Biology ,medicine.disease_cause ,SF1-1100 ,Virus ,03 medical and health sciences ,Korean Native ,IMMUNOLOGY, HEALTH AND DISEASE ,Republic of Korea ,medicine ,Influenza A virus ,Influenza A Virus, H9N2 Subtype ,influenza A virus ,pathogenicity ,Animals ,030304 developmental biology ,0303 health sciences ,Gastrointestinal tract ,Virulence ,0402 animal and dairy science ,virus diseases ,04 agricultural and veterinary sciences ,General Medicine ,Pathogenicity ,040201 dairy & animal science ,Virology ,H9N2 ,Influenza A virus subtype H5N1 ,Animal culture ,Ducks ,Influenza in Birds ,live bird market ,Animal Science and Zoology ,Cloaca ,Chickens - Abstract
Since its first appearance in 1996, H9N2 avian influenza virus (AIV) of the Y439 lineage persisted in Korean live bird markets (LBMs) until the last documented occurrence in 2018. However, in June 2020, the avian influenza surveillance program detected a novel H9N2 AIV belonging to the Y280 lineage, which has zoonotic potential, in a Korean native chicken (KNC) from a LBM. In this study, we infected KNCs and ducks (the 2 major species held at LBMs), as well as SPF chickens, with Y280-lineage H9N2 AIV LBM261/20 and Y439-equivalent LBM294/18 to compare pathogenicity and transmissibility. In SPF chickens, LBM261/20 replicated mostly in the respiratory tract and spread rapidly among birds. By contrast, LBM294/18 replicated preferentially in the gastrointestinal tract and transmitted more slowly than LBM261/20. LBM261/20 replicated for a longer time in KNCs than in SPF chickens, and only in the respiratory tract; by contrast, LBM294/18 was detected in the oropharynx and cloaca. Ducks did not shed either virus or seroconvert. Taken together, the data suggest that the scheme used to monitor the newly introduced H9N2 AIV of the Y280 lineage needs to be modified to place emphasis on oropharyngeal sampling. Such changes will facilitate better disease control and protect public health.
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- 2021
24. Transcriptome analysis reveals the influence of anaesthetic stress on the immune system of crucian carp ( Carassius auratus ) under the process of treatment and low concentration transport by MS‐222 and Eugenol
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Yajun Wang, Kuang Siwen, Qijun Le, Yu Na, Yang Yang, Xiaojun Yan, Zhang Man, Yibo Sun, Hu Jiabao, Gu Weiwei, and Cao Xiaohuan
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Eugenol ,Transcriptome ,chemistry.chemical_compound ,Immune system ,Biochemistry ,chemistry ,Carassius auratus ,Crucian carp ,Aquatic Science ,Biology ,biology.organism_classification ,Volume concentration - Published
- 2019
25. Prognostic subclass of intrahepatic cholangiocarcinoma by integrative molecular–clinical analysis and potential targeted approach
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Yu Na Kang, Taofic Mounajjed, Tae Seok Kim, Yong Hoon Kim, Daniel R. O'Brien, Loretta K. Allotey, Keun Soo Ahn, Koo Jeong Kang, Mitesh J. Borad, Lewis R. Roberts, and Jean Pierre A. Kocher
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Male ,Antimetabolites, Antineoplastic ,medicine.medical_specialty ,Bioinformatics ,medicine.disease_cause ,Deoxycytidine ,Subclass ,Cholangiocarcinoma ,Carcinoembryonic antigen ,Internal medicine ,Republic of Korea ,Gene expression ,medicine ,Humans ,RNA, Neoplasm ,Intrahepatic Cholangiocarcinoma ,Aged ,Retrospective Studies ,Aged, 80 and over ,Hepatology ,biology ,Clinical pathology ,business.industry ,Middle Aged ,Prognosis ,medicine.disease ,Gemcitabine ,United States ,Up-Regulation ,Bile Ducts, Intrahepatic ,Bile Duct Neoplasms ,Mutation ,biology.protein ,Female ,KRAS ,Viral hepatitis ,business ,Genes, Neoplasm - Abstract
Although molecular characterization of iCCA has been studied recently, integrative analysis of molecular and clinical characterization has not been fully established. If molecular features of iCCA can be predicted based on clinical findings, we can approach to distinguish targeted treatment. We analyzed RNA sequencing data annotated with clinicopathologic data to clarify molecular-specific clinical features and to evaluate potential therapies for molecular subtypes. We performed next-generation RNA sequencing of 30 surgically resected iCCA from Korean patients and the clinicopathologic features were analyzed. The RNA sequences from 32 iCCA resected from US patients were used for validation. Patients were grouped into two subclasses on the basis of unsupervised clustering, which showed a difference in 5-year survival rates (48.5% vs 14.2%, p = 0.007) and similar survival outcome in the US samples. In subclass B (poor prognosis), both data sets were similar in higher carcinoembryonic antigen and cancer antigen 19-9 levels, underlying cholangitis, and bile duct-type pathology; in subclass A (better prognosis), there was more frequent viral hepatitis and cholangiolar-type pathology. On pathway analysis, subclass A had enriched liver-related signatures. Subclass B had enriched inflammation-related and TP53 pathways, with more frequent KRAS mutations. CCA cell lines with similar gene expression patterns of subclass A were sensitive to gemcitabine. Two molecular subtypes of iCCA with distinct clinicopathological differences were identified. Knowledge of clinical and pathologic characteristics can predict molecular subtypes, and knowledge of different subtype signaling pathways may lead to more rational, targeted approaches to treatment.
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- 2019
26. Inhibition of LOX-1 alleviates the proinflammatory effects of high-mobility group box 1 in Aspergillus fumigatus keratitis
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Jia-Qian Jiang, Cui Li, Yu-Na Ma, Guiqiu Zhao, Cong-Xian Cui, Xudong Peng, Qian Wang, Chen-Yu Li, Qiang Xu, and Guoqiang Zhu
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Chemokine ,biology ,business.industry ,lox-1 ,chemical and pharmacologic phenomena ,biology.organism_classification ,HMGB1 ,high-mobility group box 1 ,Corneal inflammation ,Microbiology ,Aspergillus fumigatus ,Proinflammatory cytokine ,03 medical and health sciences ,Ophthalmology ,0302 clinical medicine ,Immune system ,lcsh:Ophthalmology ,lcsh:RE1-994 ,030221 ophthalmology & optometry ,biology.protein ,Medicine ,Macrophage ,Tumor necrosis factor alpha ,business ,aspergillus fumigatus keratitis - Abstract
Aim To investigate the inflammatory amplification effect of high-mobility group box 1 (HMGB1) in Aspergillus fumigatus (A. fumigatus) keratitis and the relationship between lectin-like oxidized low-density lipoprotein receptor 1 (LOX-1) and HMGB1 in keratitis immune responses. Methods Phosphate buffer saline (PBS), and Boxb were injected into BALB/c mice subconjunctivally before the corneas were infected with A. fumigatus. RAW264.7 macrophages and neutrophils were pretreated with PBS and Boxb to determine the HMGB1 inflammatory amplification effects. Abdominal cavity extracted macrophages were pretreated with Boxb and Poly (I) (a LOX-1 inhibitor) before A. fumigatus hyphae stimulation to prove the the relationship between the two molecules. LOX-1, interleukin-1β (IL-1β), tumor necrosis factor-α (TNF-α), macrophage inflammatory protein-2 (MIP-2) and IL-10 were assessed by polymerase chain reaction and Western blot. Results Pretreatment with Boxb exacerbated corneal inflammation. In macrophages and neutrophils, A. fumigatus induced LOX-1, IL-1β, TNF-α and MIP-2 expression in Boxb group was higher than those in PBS group. Poly (I) treatments before infection alleviated the proinflammatory effects of Boxb in abdominal cavity extracted macrophages. Pretreatment with Boxb did not influence Dectin-1 mRNA levels in macrophages and neutrophils. Conclusion In fungal keratitis, HMGB1 is a proinflammatory factor in the first line of immune response. HMGB1 mainly stimulates neutrophils and macrophages to produce inflammatory cytokines and chemokines during the immune response. LOX-1 participates in HMGB1 induced inflammatory exacerbation in A. fumigatus keratitis.
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- 2019
27. Effects of formaldehyde on detoxification and immune responses in silver pomfret (Pampus argenteus)
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Yang Yang, Shanliang Xu, Qijun Le, Hu Jiabao, Xiaojun Yan, Zhang Man, Kuang Siwen, Yajun Wang, Gu Weiwei, Yibo Sun, Yu Na, and Cao Xiaohuan
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Fish Proteins ,0301 basic medicine ,Formaldehyde ,Aquaculture ,Ectoparasitic Infestations ,Aquatic Science ,Kidney ,Transcriptome ,03 medical and health sciences ,chemistry.chemical_compound ,Immune system ,Detoxification ,Animals ,Environmental Chemistry ,Pampus argenteus ,Gene ,chemistry.chemical_classification ,Pomfret ,biology ,Gene Expression Profiling ,Sequence Analysis, DNA ,04 agricultural and veterinary sciences ,General Medicine ,biology.organism_classification ,Perciformes ,030104 developmental biology ,Enzyme ,Liver ,Seafood ,chemistry ,Biochemistry ,Inactivation, Metabolic ,040102 fisheries ,0401 agriculture, forestry, and fisheries - Abstract
Formaldehyde can effectively control ectoparasites in silver pomfret (Pampus argenteus). However, there is limited information on the effects of formaldehyde treatment at a molecular level in fishes. In the present study, transcriptome profiling was conducted to investigate the effects of formaldehyde treatment (80 mg/L, bath for 1 h every day for three consecutive days) on the liver and kidney tissues of silver pomfret. A total of 617959982 clean reads were obtained and assembled into 265760 unigenes with an N50 length of 1507 bp, and the assembled unigenes were all annotated by alignment with public databases. A total of 2204 differentially expressed genes (DEGs) were detected in the liver and kidney tissues, and they included 7 detoxification- related genes and 9 immune-related genes, such as CYP450, GST, MHC I & II, and CCR. In addition, 1440 DEGs were mapped to terms in the GO database, and 1064 DEGs were mapped to the KEGG database. The expression of 4 detoxification-related genes and 6 immune-related genes in three days formaldehyde treatment were analyzed using RT-qPCR, and the antioxidant enzyme levels were also determined. The results indicate differential expression of detoxification- and immune-related genes during the three days formaldehyde treatment. Our data could provide a reference for the treatment of parasites to avoid high mortality and help in understanding the molecular activity in fishes after formaldehyde exposure.
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- 2019
28. 3D cell printing of islet-laden pancreatic tissue-derived extracellular matrix bioink constructs for enhancing pancreatic functions
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In Kyong Shim, Myungji Kim, Yu Na Lee, Dong-Woo Cho, Seok-Won Kim, Jaewook Kim, Jinah Jang, Dong Gyu Hwang, Song Cheol Kim, Hyeonji Kim, and Song Lee
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endocrine system diseases ,medicine.medical_treatment ,Cell ,Biomedical Engineering ,02 engineering and technology ,Biology ,010402 general chemistry ,01 natural sciences ,Extracellular matrix ,Islets of Langerhans ,Tissue engineering ,medicine ,Humans ,General Materials Science ,Induced pluripotent stem cell ,geography ,geography.geographical_feature_category ,Tissue Engineering ,Insulin ,General Chemistry ,General Medicine ,021001 nanoscience & nanotechnology ,Islet ,Extracellular Matrix ,0104 chemical sciences ,Transplantation ,medicine.anatomical_structure ,Printing, Three-Dimensional ,Cancer research ,0210 nano-technology ,Pancreas - Abstract
Type 1 diabetes mellitus (T1DM) is a form of diabetes that inhibits or halts insulin production in the pancreas. Although various therapeutic options are applied in clinical settings, not all patients are treatable with such methods due to the instability of the T1DM or the unawareness of hypoglycemia. Islet transplantation using a tissue engineering-based approach may mark a clinical significance, but finding ways to increase the function of islets in 3D constructs is a major challenge. In this study, we suggest pancreatic tissue-derived extracellular matrix as a potential candidate to recapitulate the native microenvironment in transplantable 3D pancreatic tissues. Notably, insulin secretion and the maturation of insulin-producing cells derived from human pluripotent stem cells were highly up-regulated when cultured in pdECM bioink. In addition, co-culture with human umbilical vein-derived endothelial cells decreased the central necrosis of islets under 3D culture conditions. Through the convergence of 3D cell printing technology, we validated the possibility of fabricating 3D constructs of a therapeutically applicable transplant size that can potentially be an allogeneic source of islets, such as patient-induced pluripotent stem cell-derived insulin-producing cells.
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- 2019
29. Genetic evidence for the intercontinental movement of avian influenza viruses possessing North American-origin nonstructural gene allele B into South Korea
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Sung-il Kang, Myoung-Heon Lee, Youn-Jeong Lee, Soo-Jeong Kye, Yu-Na Lee, Sun-Ha Cheon, Gyeong-Beom Heo, Kwang-Nyeong Lee, Han-Mo Son, Eun Kyoung Lee, and Jeong Won Kim
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0301 basic medicine ,Microbiology (medical) ,animal diseases ,Reassortment ,Zoology ,Animals, Wild ,Viral Nonstructural Proteins ,medicine.disease_cause ,Microbiology ,Genetic analysis ,Beringia ,Birds ,03 medical and health sciences ,Goose ,biology.animal ,Geese ,Republic of Korea ,Genetics ,medicine ,Animals ,Allele ,Molecular Biology ,Alleles ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,biology ,Genetic Variation ,virus diseases ,biology.organism_classification ,Influenza A virus subtype H5N1 ,030104 developmental biology ,Infectious Diseases ,Influenza A virus ,Influenza in Birds ,Vector (epidemiology) ,North America ,Geographic Information Systems ,Animal Migration ,Anser - Abstract
Avian influenza viruses (AIVs) are genetically separated by geographical barriers, resulting in the independent evolution of North American and Eurasian lineages. In the present study, to determine whether AIVs possessing the North American-origin nonstructural (NS) gene were previously introduced into South Korea, we performed a genetic analysis of AIVs isolated from fecal samples of migratory birds. We detected seven viruses possessing the North American-origin NS allele B among 413 AIV-positive samples obtained during AI surveillance between 2012 and 2017. We found evidence for the intercontinental transmission of at least three genetically distinct clusters of the B allele of the North American-origin NS gene into Eurasia at a low frequency. The host species of three viruses were identified as the greater white-fronted goose (Anser albifrons) using a DNA barcoding technique. Moreover, we used GPS-CDMA-based telemetry to determine the migration route of the greater white-fronted goose between the Far East of Russia and South Korea and found that this species may play an important role as an intermediate vector in the intercontinental transmission of AIVs. To improve our understanding of the role of wild birds in the ecology of AIVs, advanced AIV surveillance is required in the Far East of Russia as well as in Alaska region of Beringia accompanied by host identification and wild bird tracking.
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- 2018
30. Highly Pathogenic Avian Influenza A(H5N6) in Domestic Cats, South Korea
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Ji-Youl Jung, Hyunkyoung Lee, Yu-Na Lee, Youn-Jeong Lee, Eun Kyoung Lee, You-Chan Bae, Eun-Jin Choi, Gyeong-Beom Heo, ByungJae So, and Kyung-Hyun Lee
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Male ,0301 basic medicine ,Microbiology (medical) ,Epidemiology ,Biopsy ,Highly pathogenic ,viruses ,animal diseases ,lcsh:Medicine ,Hemagglutinin Glycoproteins, Influenza Virus ,HPAI ,Biology ,Cat Diseases ,medicine.disease_cause ,complex mixtures ,Disease Outbreaks ,lcsh:Infectious and parasitic diseases ,03 medical and health sciences ,South Korea ,Republic of Korea ,medicine ,Animals ,lcsh:RC109-216 ,highly pathogenic avian influenza ,influenza A ,Lung ,Phylogeny ,CATS ,business.industry ,cats ,lcsh:R ,Dispatch ,Outbreak ,food and beverages ,virus diseases ,Highly Pathogenic Avian Influenza A(H5N6) Virus in Domestic Cats, South Korea ,Influenza a ,Poultry farming ,Virology ,H5N6 ,Influenza A virus subtype H5N1 ,030104 developmental biology ,Infectious Diseases ,Influenza A virus ,RNA, Viral ,pathology ,influenza ,business - Abstract
In December 2016, highly pathogenic avian influenza (HPAI) infection with systemic pathologic lesions was found in cats in South Korea. Genetic analyses indicated that the feline isolates were similar to HPAI H5N6 viruses isolated in chicken farms nearby. This finding highlights the need for monitoring of domestic mammals during HPAI outbreaks.
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- 2018
31. Pathological lesions and antigen localization in chicken, ducks and Japanese quail naturally infected by novel highly pathogenic avian influenza (H5N6), Korea, 2016
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Kim Ji-Hyeon, Lee Yu-Na, Joh Seong-Joon, Song Byung-Min, Lee Eun-Kyoung, Lee Youn-Jeong, Lee Kyung-Hyun, Bae You-Chan, Park Seok-Chan, Kwon Yong-Kuk, Heo Gyeong-Beom, Lee Hee-Soo, and Kwon Hyuk-Man
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0301 basic medicine ,biology ,040301 veterinary sciences ,Highly pathogenic ,04 agricultural and veterinary sciences ,medicine.disease_cause ,Virology ,Quail ,Influenza A virus subtype H5N1 ,0403 veterinary science ,03 medical and health sciences ,030104 developmental biology ,Antigen ,biology.animal ,medicine ,Pathological - Published
- 2018
32. Association between vaginal microbiota and risk of early pregnancy miscarriage
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Yu-Na Guo, Xianjing Xie, Yi Lin, Weihong Zeng, Chunlei Shi, Xiaoli Qin, Xiaorui Liu, Cao Yunyun, and Xiao-Ying He
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040301 veterinary sciences ,030231 tropical medicine ,Immunology ,Physiology ,Early pregnancy factor ,medicine.disease_cause ,Microbiology ,Miscarriage ,0403 veterinary science ,03 medical and health sciences ,0302 clinical medicine ,Pregnancy ,Escherichia ,Lactobacillus ,RNA, Ribosomal, 16S ,medicine ,Immunology and Allergy ,Animals ,Shigella ,General Veterinary ,biology ,Microbiota ,04 agricultural and veterinary sciences ,General Medicine ,Abortion, Veterinary ,biology.organism_classification ,medicine.disease ,Infectious Diseases ,Vagina ,Etiology ,biology.protein ,Female ,Bacteroides ,Staphylococcus - Abstract
Approximately 15 % of clinically recognized pregnancies end in miscarriage. To explore the vaginal microbiota profile in women diagnosed with early pregnancy miscarriage (including missed miscarriage [M] or empty-sac miscarriage [E]), the microbial community structure in vaginal fluid was evaluated by Illumina MiSeq sequencing of the 16S rRNA gene V4 region and compared with that in women with normal pregnancy (P). Taxa identified in samples from the P, E, and M groups formed distinct clusters. The M group had the highest bacterial species richness and diversity, with lower Lactobacillus levels and higher Bacteroides, Halomonas, Miscellaneous-Crenarchaeota, Bacillus, Staphylococcus, Escherichia/Shigella, and Acetobacter levels than in the other two groups. The vaginal community-state types differed significantly among the three groups (P = 0.02) but were similar between the P and E groups (P = 0.21). Moreover, we identified an optimal marker set composed of 12 operational taxonomic units based on a random forest model that distinguished the M and P groups, with areas under the receiver-operating characteristic curve of 86.76 % and 93.33 % in the training and test groups, respectively. In conclusion, this study highlights that patients with early pregnancy miscarriage had a significantly different vaginal microbiota profile. Microbial markers analyzed by RT-qPCR may be applied for the etiological diagnosis of miscarriage. Further studies should be performed to elucidate the possible mechanism of special strains affecting miscarriage during early pregnancy.
- Published
- 2021
33. Gastrin-Releasing Peptide (GRP) Stimulates Osteoclastogenesis in Periodontitis
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Ji-Young Joo, YunJeong Choi, Hyung Joon Kim, Soon Chul Heo, Yu Na Kim, Moon-Kyoung Bae, and Jae Joon Hwang
- Subjects
Lipopolysaccharides ,0301 basic medicine ,Alveolar Bone Loss ,Mice ,0302 clinical medicine ,Osteogenesis ,Gastrin-releasing peptide ,RNA, Small Interfering ,lcsh:QH301-705.5 ,periodontitis ,Cells, Cultured ,Mice, Inbred ICR ,Gene knockdown ,biology ,Chemistry ,Cell Differentiation ,General Medicine ,Gastrin-Releasing Peptide ,GRP ,Female ,Porphyromonas gingivalis ,hormones, hormone substitutes, and hormone antagonists ,bone resorption ,Signal Transduction ,Real-Time Polymerase Chain Reaction ,Article ,Bone resorption ,03 medical and health sciences ,Paracrine signalling ,Downregulation and upregulation ,medicine ,Animals ,Humans ,Gene Silencing ,osteoclastogenesis ,Periodontitis ,Macrophages ,RANK Ligand ,Epithelial Cells ,030206 dentistry ,medicine.disease ,biology.organism_classification ,Coculture Techniques ,Receptors, Bombesin ,Disease Models, Animal ,HaCaT ,030104 developmental biology ,lcsh:Biology (General) ,Culture Media, Conditioned ,Cancer research - Abstract
Periodontitis is a chronic inflammatory disease with alveolar bone resorption and subsequent tooth loss as its ultimate outcomes. Gastrin-releasing peptide (GRP) is a neuropeptide with growth-stimulatory and tumorigenic properties, and neuropeptides have previously been suggested to play a role in the complex cascade of chemical activity associated with periodontal inflammation. In this study, GRP treatment enhanced the differentiation of bone marrow-derived macrophages (BMMs) into osteoclasts, and gastrin-releasing peptide receptor (GRPR) antagonists suppressed the pro-osteoclastogenic effect of GRP. Grpr-siRNA knockdown resulted in a significantly lower number of osteoclasts formed as compared with the control. Interestingly, gene expression analysis indicated downregulation of Grp and Grpr expressions in BMMs during osteoclastogenesis. Moreover, ligature-induced periodontitis model in mice and gingival samples from patients with periodontitis displayed increased immunostaining of GRP in the oral epithelium. Subsequently, stimulation of mouse primary epithelial cells (ECs) and HaCaT cells, human epidermal keratinocytes, with lipopolysaccharides (LPS) of Porphyromonas gingivalis or live P. gingivalis upregulated Grp and Grpr expressions. Finally, coculture of P. gingivalis-stimulated ECs and BMMs using Transwell system revealed that the differentiation of BMMs was induced when subjected to paracrine activation by LPS- as well as live-P. gingivalis stimulated ECs. Taken together, our results demonstrate that the pro-osteoclastogenic properties of BMMs may be modulated by GRP produced by ECs in the periodontal microenvironment.
- Published
- 2020
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34. Elevated Expression of Cathepsin K in Periodontal Ligament Fibroblast by Inflammatory Cytokines Accelerates Osteoclastogenesis via Paracrine Mechanism in Periodontal Disease
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YunJeong Choi, Soon Chul Heo, Jae Joon Hwang, Ji-Young Joo, Hyung Joon Kim, Yu Na Kim, and Moon-Kyoung Bae
- Subjects
0301 basic medicine ,Cathepsin K ,Interleukin-1beta ,Gingiva ,periodontal disease ,periodontal ligament fibroblast ,Osteoclasts ,lcsh:Chemistry ,0302 clinical medicine ,Osteogenesis ,lcsh:QH301-705.5 ,Spectroscopy ,Cells, Cultured ,Mice, Inbred ICR ,biology ,Chemistry ,General Medicine ,Computer Science Applications ,RANKL ,Cytokines ,Tumor necrosis factor alpha ,inflammatory cytokine ,Periodontal Ligament ,Catalysis ,Article ,Proinflammatory cytokine ,Inorganic Chemistry ,03 medical and health sciences ,Paracrine signalling ,Osteoprotegerin ,Dental pulp stem cells ,Paracrine Communication ,Periodontal fiber ,Animals ,Humans ,Physical and Theoretical Chemistry ,Molecular Biology ,Periodontal Diseases ,osteoclastogenesis ,Inflammation ,Tumor Necrosis Factor-alpha ,Macrophage Colony-Stimulating Factor ,Organic Chemistry ,RANK Ligand ,030206 dentistry ,Fibroblasts ,030104 developmental biology ,lcsh:Biology (General) ,lcsh:QD1-999 ,Cancer research ,biology.protein - Abstract
Cathepsin K (CTSK) is a cysteine protease that is mainly produced from mature osteoclasts and contributes to the destruction of connective tissues and mineralized matrix as a consequence of periodontal disease (PD). However, few studies have reported its regulatory role in osteoclastogenesis-supporting cells in inflammatory conditions. Here, we investigated the role of CTSK in osteoclastogenesis-supporting cells, focusing on the modulation of paracrine function. Microarray data showed that CTSK was upregulated in PD patients compared with healthy individuals, which was further supported by immunohistochemistry and qPCR analyses performed with human gingival tissues. The expression of CTSK in the osteoclastogenesis-supporting cells, including dental pulp stem cells, gingival fibroblasts, and periodontal ligament fibroblasts (PDLFs) was significantly elevated by treatment with inflammatory cytokines such as TNF&alpha, and IL-1&beta, Moreover, TNF&alpha, stimulation potentiated the PDLF-mediated osteoclastogenesis of bone marrow-derived macrophages. Interestingly, small interfering RNA-mediated silencing of CTSK in PDLF noticeably attenuated the TNF&alpha, triggered upregulation of receptor activator of nuclear factor kappa-B ligand (RANKL), macrophage colony-stimulating factor, and RANKL/osteoprotegerin ratio, thereby abrogating the enhanced osteoclastogenesis-supporting activity of PDLF. Collectively, these results suggest a novel role of CTSK in the paracrine function of osteoclastogenesis-supporting cells in periodontal disease.
- Published
- 2020
35. Recombinant Live Attenuated Influenza Virus Expressing Conserved G-Protein Domain in a Chimeric Hemagglutinin Molecule Induces G-Specific Antibodies and Confers Protection against Respiratory Syncytial Virus
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Yu-Jin Jung, Subbiah Jeeva, Ki-Hye Kim, Sang-Moo Kang, Bo Ryoung Park, Yu-Na Lee, and Youri Lee
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0301 basic medicine ,G protein ,recombinant LAIV. RSV G ,Immunology ,chimeric hemagglutinin ,lcsh:Medicine ,Hemagglutinin (influenza) ,Article ,Virus ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,law ,Drug Discovery ,Live attenuated influenza vaccine ,Pharmacology (medical) ,030212 general & internal medicine ,Pharmacology ,biology ,lcsh:R ,Virology ,Vaccination ,030104 developmental biology ,Infectious Diseases ,Immunization ,Recombinant DNA ,biology.protein - Abstract
Respiratory syncytial virus (RSV) is one of the most important pathogens causing significant morbidity and mortality in infants and the elderly. Live attenuated influenza vaccine (LAIV) is a licensed vaccine platform in humans and it is known to induce broader immune responses. RSV G attachment proteins mediate virus binding to the target cells and they contain a conserved central domain with neutralizing epitopes. Here, we generated recombinant LAIV based on the attenuated A/Puerto Rico/8/1934 virus backbone, expressing an RSV conserved G-domain in a chimeric hemagglutinin (HA) fusion molecule (HA-G). The attenuated phenotypes of chimeric HA-G LAIV were evident by restricted replication in the upper respiratory tract and low temperature growth characteristics. The immunization of mice with chimeric HA-G LAIV induced significant increases in G-protein specific IgG2a (T helper type 1) and IgG antibody-secreting cell responses in lung, bronchioalveolar fluid, bone marrow, and spleens after RSV challenge. Vaccine-enhanced disease that is typically caused by inactivated-RSV vaccination was not observed in chimeric HA-G LAIV as analyzed by lung histopathology. These results in this study suggest a new approach of developing an RSV vaccine candidate while using recombinant LAIV, potentially conferring protection against influenza virus and RSV.
- Published
- 2020
- Full Text
- View/download PDF
36. Direct conversion of yellow mealworm larvae into biodiesel via a non-catalytic transesterification platform
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Young-Kwon Park, Dong-Jun Lee, Yiu Fai Tsang, Sungyup Jung, Yu-Na Jang, Eilhann E. Kwon, Hana Kim, Kyu-Hyun Park, and Min-Young Kim
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Mealworm ,Biodiesel ,Moisture ,Bran ,biology ,Chemistry ,General Chemical Engineering ,Extraction (chemistry) ,General Chemistry ,Transesterification ,Biodegradable waste ,Pulp and paper industry ,biology.organism_classification ,Industrial and Manufacturing Engineering ,Yield (chemistry) ,Environmental Chemistry - Abstract
A massive quantity of organic waste is generated globally. Despite its detrimental impacts on all environmental media (soil, water, and air), a sustainable valorization platform for organic waste has not been fully developed. In an effort to reduce the technical gap, this study placed great emphasis on a new valorization route employing the conversion of food/agricultural waste to biodiesel (BD). In this study, the yellow mealworm larvae (MW) were grown on piles of wheat bran to convert carbohydrates to fat through its fast metabolism. The ultimate aim was to enhance the economic viability of BD by producing fat from food/agricultural waste. Fat from MW larvae were then converted to BD through the non-catalytic conversion (authors-invented) process. As a reference, conventional acid/base-catalyzed transesterification of fat from MW larvae was also made. The conventional conversion process revealed a BD yield of 48.55 wt%, which was attributed to the high content of moisture and impurities in the MW extract. The non-catalytic conversion process of MW extract showed a BD yield of 87.75 wt% in 1 min at 370 °C, showing an extraordinarily high tolerance against water and impurities. The non-catalytic reaction also allowed the in-situ conversion of fat in MW to BD even at 320 °C without fat extraction. The enhanced reaction kinetics could be due to the catalytic effects of the alkaline earth metals in MW.
- Published
- 2022
37. Phylogeographic analysis of H5N1 highly pathogenic avian influenza virus isolated in Cambodia from 2018 to 2019
- Author
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Seng Bunnary, Sothyra Tum, Soo-Jeong Kye, Youn-Jeong Lee, Choi-Kyu Park, Yu-Ri Park, Yu-Na Lee, Yoon-Gi Baek, Ren Theary, Young-Jae Si, Dong-Hun Lee, and Myoung-Heon Lee
- Subjects
0301 basic medicine ,Microbiology (medical) ,Genotype ,viruses ,030106 microbiology ,Biology ,medicine.disease_cause ,Microbiology ,Genome ,History, 21st Century ,03 medical and health sciences ,parasitic diseases ,Genetics ,medicine ,Animals ,Humans ,Public Health Surveillance ,Clade ,Molecular Biology ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,Poultry Diseases ,Phylogenetic tree ,Influenza A Virus, H5N1 Subtype ,virus diseases ,Outbreak ,Virology ,Influenza A virus subtype H5N1 ,Phylogeography ,030104 developmental biology ,Infectious Diseases ,Highly Pathogenic Avian Influenza Virus ,Cambodia - Abstract
Since 2004, several outbreaks of highly pathogenic avian influenza (HPAI) have been reported in Cambodia. Until 2013, all H5N1 viruses identified in Cambodia belonged to clade 1 and its subclades. H5N1 HPAI viruses belonging to clade 2.3.2.1c have been dominant since the beginning of 2014, with various genotypes (KH1-KH5) reported. Here, we isolated nine H5N1 HPAI viruses from domestic poultry farms and slaughterhouses in Cambodia during 2018–2019 and performed phylogenetic analysis of whole genome sequences. All isolates were classified as H5 clade 2.3.2.1c viruses and all harbored multi-basic amino acid sequences (PQRERRRKR/GLF) at the haemagglutinin (HA) cleavage site. Phylogenetic analysis revealed that the H5N1 isolates in this study belonged to the KH2 genotype, the dominant genotype in Cambodia in 2015. Phylogenetic analysis of the HA gene showed that the isolates were divided into two groups (A and B). The results of Bayesian discrete phylogeography analysis revealed that the viral migration pathways from Vietnam to Cambodia (Bayes factor value: 734,039.01; posterior probability: 1.00) and from Cambodia to Vietnam (Bayes factor value: 26,199.95; posterior probability: 1.00) were supported by high statistical values. These well-supported viral migrations between Vietnam and Cambodia demonstrate that viral transmission continued in both directions. Several factors may have contributed to this, including the free-grazing duck system and movement of poultry-related products. Thus, the results emphasize the need for an enhanced international surveillance program to better understand transboundary infection and evolution of H5N1 HPAI viruses, along with implementation of more stringent international trade controls on poultry and poultry products.
- Published
- 2020
38. Temporal Heterogeneity of ROS1 Fusion and Braf Fusion Conferred Resistance to First-and Third-generation EGFR Tkis: a Case Report
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Yuan Li, Wenfeng Fang, Shuyin Chen, Jing Lin, Meng Zhang, Guo-hua Yao, Bao-rong Chen, Yihua Huang, Yu-na Peng, and Liya Guan
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Egfr tki ,Fusion ,Temporal heterogeneity ,ROS1 Fusion ,Cancer research ,Biology ,Third generation - Abstract
Background: The development of EGFR-tyrosine kinase inhibitors (EGFR-TKIs) have revolutionized the treatment paradigms for non-small cell lung cancer (NSCLC) patients. However, acquired resistance inevitably develops with a median progression-free survival (PFS) less than a year. The advancements in sequencing technologies have significantly promoted the identification of potential resistant mechanisms to targeted therapies.Case presentation: A 39-year-old Chinese male was diagnosed stage IVB NSCLC with EGFR exon 19 deletion (EGFR 19del) and received icotinib but got primary EGFR-TKI resistance caused by ROS1 fusion one month later. Then he received icotinib plus crizotinib and achieved partial response with a profession free survival of 4.8 months. Then he switched to osimertinib plus crizotinib due to the emergence of EGFR T790M mutation. TRIM24-BRAF fusion was detected after osimertinib failure, which might be potential resistant mechanism to osimertinib.Conclusions: This is the first case to confirm crizotinib plus icotinib in patients harboring both EGFR 19del and ROS1 fusion. This case displays the temporal heterogeneity of different resistant mechanisms emerging during disease course, highlighting the importance of dynamic genetic monitoring for better clinical managements.
- Published
- 2020
39. Effect of Ammonia and Indole-3-acetic Acid Producing Endophytic Klebsiella pneumoniae YNA12 as a Bio-Herbicide for Weed Inhibition: Special Reference with Evening Primroses
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Chang-Wook Park, Jeong-Ran Lee, In-Jung Lee, Sang-Mo Kang, Saqib Bilal, Raheem Shahzad, Ko-Eun Lee, and Yu-Na Kim
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0106 biological sciences ,0301 basic medicine ,macronutrients ,Plant Science ,theater ,01 natural sciences ,Article ,abscisic acid ,03 medical and health sciences ,chemistry.chemical_compound ,Food science ,Hydrogen peroxide ,Abscisic acid ,Ecology, Evolution, Behavior and Systematics ,Ecology ,biology ,IAA ,bio-herbicide ,catalase ,Botany ,food and beverages ,biology.organism_classification ,Evening primrose ,030104 developmental biology ,chemistry ,Catalase ,Germination ,Seedling ,QK1-989 ,biology.protein ,theater.play ,Weed ,Indole-3-acetic acid ,endophyte ,010606 plant biology & botany - Abstract
Information on the use of endophytic bacteria as a bio-herbicide for the management of weed control in agricultural fields is limited. The current study aimed to isolate endophytic bacteria from evening primroses and to screen them for their bio-herbicidal activity. Two isolated endophytic bacteria (Pantoea dispersa YNA11 and Klebsiella pneumoniae YNA12) were initially screened for citrate utilization and for indole-3-acetic acid (IAA) and catalase production. The preliminary biochemical assessment showed YNA12 as a positive strain. Ammonia, catalase, and IAA in its culture filtrate were quantified. Gas Chromatography/Mass Spectroscopy- Selective Ion Monitoring (GC/MS-SIM) analysis revealed the production of IAA by YNA12 in a time-dependent manner. YNA12 also exhibited significant ammonia-producing potential and catalase activity against hydrogen peroxide. The YNA12 culture filtrate significantly inhibited the germination rate of evening primrose seeds, resulting in a marked reduction in seedling length and biomass compared with those of the control seeds. Moreover, the culture filtrate of YNA12 significantly accelerated the endogenous abscisic acid (ABA) production and catalase activity of evening primrose seedlings. Macronutrient regulation was adversely affected in the seedlings exposed to the culture filtrate of YNA12, leading to inhibition of seed germination. The current results suggest that endophytic YNA12 may be used as a potent bio-herbicidal agent for controlling weed growth and development.
- Published
- 2020
40. Src Inhibition Attenuates Liver Fibrosis by Preventing Hepatic Stellate Cell Activation and Decreasing Connective Tissue Growth Factor
- Author
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Ji-Ha Lee, Yu Na Kang, Byoung Kuk Jang, Jae Seok Hwang, Keun-Gyu Park, So-Hee Lee, Mi-Kyung Kim, and Hye-Young Seo
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Liver Cirrhosis ,Male ,STAT3 Transcription Factor ,autophagy ,Thioacetamide ,Article ,tgf-β ,Transforming Growth Factor beta ,Renal fibrosis ,medicine ,Hepatic Stellate Cells ,hepatocyte ,Animals ,Humans ,smad3 ,ctgf ,Benzodioxoles ,Phosphorylation ,STAT3 ,lcsh:QH301-705.5 ,Cells, Cultured ,src ,liver fibrosis ,biology ,Chemistry ,Connective Tissue Growth Factor ,General Medicine ,hsc ,pp2 ,Hepatic stellate cell activation ,Up-Regulation ,CTGF ,Mice, Inbred C57BL ,medicine.anatomical_structure ,src-Family Kinases ,lcsh:Biology (General) ,Hepatocyte ,Cancer research ,biology.protein ,Hepatic stellate cell ,Quinazolines ,saracatinib ,Tyrosine kinase ,Proto-oncogene tyrosine-protein kinase Src - Abstract
The SRC kinase family comprises non-receptor tyrosine kinases that are ubiquitously expressed in all cell types. Although Src is reportedly activated in pulmonary and renal fibrosis, little is known regarding its role in liver fibrosis. This study investigated whether the inhibition of Src protects against liver fibrosis. The expression of Src was upregulated in thioacetamide (TAA)-induced fibrotic mouse liver and cirrhosis of patients, and phospho-Src was upregulated during activation of hepatic stellate cells (HSC). In addition, Src inhibition reduced the expression of &alpha, smooth muscle actin (&alpha, SMA) in primary HSCs and suppressed transforming growth factor &beta, (TGF-&beta, )-induced expression of connective tissue growth factor (CTGF) in hepatocytes. Src inhibitor Saracatinib also attenuated TAA-induced expression of type I collagen, &alpha, SMA, and CTGF in mouse liver tissues. The antifibrotic effect of Src inhibitors was associated with the downregulation of smad3, but not of signal transducer and activator of transcription 3 (STAT3). In addition, Src inhibition increased autophagy flux and protected against liver fibrosis. These results suggest that Src plays an important role in liver fibrosis and that Src inhibitors could be treat liver fibrosis.
- Published
- 2020
41. Enhancement of Viability of Weissella cibaria CMU by Low-Temperature Encapsulation
- Author
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Hyo-Jeong Hwang, Da-Eon Lee, Yu-Na Jo, Kyoung-Sik Han, and Tae-Hwan Jung
- Subjects
chemistry.chemical_compound ,biology ,Chemistry ,Sodium Caseinate ,Food science ,Weissella cibaria ,biology.organism_classification ,Gellan gum ,Encapsulation (networking) - Published
- 2018
42. Discriminating power of rapidly mutating Y-STRs in deep rooted endogamous pedigrees from Sindhi population of Pakistan
- Author
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Allah Rakha, Atif Adnan, Hwan Young Lee, Ali Muhammad Waryah, Kyoung Jin Shin, Yu Na Oh, and Safdar Hussain
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Male ,0301 basic medicine ,Mutation rate ,Lineage differentiation ,Population ,Pedigree chart ,Biology ,Pathology and Forensic Medicine ,03 medical and health sciences ,0302 clinical medicine ,Ethnicity ,Humans ,Pakistan ,Sindhi ,030216 legal & forensic medicine ,education ,Genetics ,education.field_of_study ,Chromosomes, Human, Y ,Haplotype ,language.human_language ,Pedigree ,Issues, ethics and legal aspects ,Genetics, Population ,030104 developmental biology ,Haplotypes ,Genetic Loci ,Endogamy ,Mutation ,language - Abstract
Rapidly mutating Y-STRs (RM Y-STRs) have been paid much attention in recent years. The 13 RM Y-STRs (DYF387S1, DYF399S1, DYF403S1a/b, DYF404S1, DYS449, DYS518, DYS526I/II, DYS547, DYS570, DYS576, DYS612, DYS626, and DYS627) have been proved to have substantially higher haplotype diversity and discrimination capacity than conventionally used Y-STRs indicating the considerable power in paternal lineage differentiation in endogamous populations, separation of which is usually impossible with standard Y-STRs. In current study, we analyzed the RM Y-STRs and PowerPlex® Y23 System in 216 male relatives from 18 deep rooted endogamous Sindhi families from Pakistan. Mutations were frequently observed at DYF399S1, DYS449, DYS518DYS547 and DYF403S1b2 loci, which are known to mutate more rapidly than other RM Y-STRs. Overall differentiation rate with RM Y-STRs was as high as 32.88%, while those with PowerPlex® Y23 System and AmpFℓSTR® Yfiler™ kit were 6.85% and 3.65% respectively. The differentiation rate of RM Y-STRs was 29.22% and 26.03% higher than those of AmpFlSTR® Yfiler™ kit and PowerPlex® Y23 System, respectively.
- Published
- 2018
43. Analysis of unmapped regions associated with long deletions in Korean whole genome sequences based on short read data
- Author
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InSong Koh, Yu Na Lee, and Kiejung Park
- Subjects
Whole genome sequencing ,whole genome sequencing ,lcsh:QH426-470 ,structural variation ,Health Informatics ,Korean ,Computational biology ,Biology ,Genome ,unmapped region ,DNA sequencing ,Structural variation ,lcsh:Genetics ,Genetics ,Human genome ,Original Article ,deletion ,1000 Genomes Project ,Indel ,Ecology, Evolution, Behavior and Systematics ,Reference genome - Abstract
While studies aimed at detecting and analyzing indels or single nucleotide polymorphisms within human genomic sequences have been actively conducted, studies on detecting long insertions/deletions are not easy to orchestrate. For the last 10 years, the availability of long read data of human genomes from PacBio or Nanopore platforms has increased, which makes it easier to detect long insertions/deletions. However, because long read data have a critical disadvantage due to their relatively high cost, many next generation sequencing data are produced mainly by short read sequencing machines. Here, we constructed programs to detect so-called unmapped regions (UMRs, where no reads are mapped on the reference genome), scanned 40 Korean genomes to select UMR long deletion candidates, and compared the candidates with the long deletion break points within the genomes available from the 1000 Genomes Project (1KGP). An average of about 36,000 UMRs were found in the 40 Korean genomes tested, 284 UMRs were common across the 40 genomes, and a total of 37,943 UMRs were found. Compared with the 74,045 break points provided by the 1KGP, 30,698 UMRs overlapped. As the number of compared samples increased from 1 to 40, the number of UMRs that overlapped with the break points also increased. This eventually reached a peak of 80.9% of the total UMRs found in this study. As the total number of overlapped UMRs could probably grow to encompass 74,045 break points with the inclusion of more Korean genomes, this approach could be practically useful for studies on long deletions utilizing short read data.
- Published
- 2019
44. Jiangtang Xiaoke granule attenuates glucose metabolism disorder via regulating endoplasmic reticulum stress in the liver of type 2 diabetes mellitus mice
- Author
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Zhang Dongwei, Yu Na, Mu Qianqian, Mo Fangfang, Zhao Dandan, Ma Yue, Zuo Jiacheng, Zhang Yi, and Gao Sihua
- Subjects
0301 basic medicine ,medicine.medical_specialty ,biology ,Glucose-regulated protein ,business.industry ,Endoplasmic reticulum ,Insulin ,medicine.medical_treatment ,Type 2 Diabetes Mellitus ,General Medicine ,CHOP ,Carbohydrate metabolism ,03 medical and health sciences ,030104 developmental biology ,Endocrinology ,Glucose Metabolism Disorder ,Internal medicine ,medicine ,Unfolded protein response ,biology.protein ,business - Abstract
OBJECTIVE To observe the effect of Jiangtang Xiaoke (JTXK) granule on endoplasmic reticulum (ER) stress in high fat diet (HFD)-induced type 2 diabetes mellitus (T2DM) KK-Ay mice. METHODS KK-Ay mice were fed with HFD to induce the T2DM model, while normal control C57BL/6J mice were given standard feed. Fasting blood glucose (FBG) in all mice was measured weekly and oral glucose tolerance tests (OGTTs) were performed at 4 and 10 weeks after start of treatment to determine glucose metabolism. Serum fasting insulin (FINS) and insulin sensitivity index (ISI) were measured to determine insulin sensitivity. mRNA expressions of eukaryotic initiation factor-2 alpha (eIF2α), glucose regulated protein 78 (GRP78), activating transcription factor 4 (ATF4), and C/EBP homology protein (CHOP) were assessed by reverse transcription polymerase chain reaction and the protein expressions of p-eIF2α, GRP78, and CHOP were assessed by Western blotting. RESULTS JTXK granule significantly reduced FBG and free fatty acid levels and improved OGTT at the 120 min of the 10-week treatment in T2DM KK-Ay mice. FINS and HbAlc levels were reduced and insulin sensitivities were increased in KK-Ay diabetic mice, which were improved with the treatment of JTXK granule, especially at the 7 and 3.5 g/kg doses. JTXK granule at the 3.5 g/kg dose was most effective in reducing both gene and protein expressions of eIF2α, GRP78, and CHOP. CONCLUSION ER stress response is increased in T2DM KK-Ay mice. Treatment with JTXK granule attenuates glucose disorders, improves insulin sensitivity, and reduces serum FFA in T2DM KK-Ay mice. The mechanisms may be attributed to regulation of the signaling ER stress pathway via decreasing eIF2α phosphorylation and suppressing eIF2α-ATF4-CHOP activation.
- Published
- 2018
45. GPCR Kinase (GRK)-2 Is a Key Negative Regulator of Itch: l-Glutamine Attenuates Itch via a Rapid Induction of GRK2 in an ERK-Dependent Way
- Author
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Hern-Ku Lee, Suhn-Young Im, Yu-Dong Lee, Hae-Kyoung Kim, Yu-Na Im, Jeong-Soo Park, Hwa-Ryung Song, and Myung-Kwan Han
- Subjects
0301 basic medicine ,MAPK/ERK pathway ,Small interfering RNA ,G-Protein-Coupled Receptor Kinase 2 ,MAP Kinase Signaling System ,Glutamine ,Injections, Subcutaneous ,Dermatology ,Pharmacology ,Dermatitis, Contact ,Biochemistry ,Cell Line ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,immune system diseases ,Ganglia, Spinal ,parasitic diseases ,Dinitrochlorobenzene ,otorhinolaryngologic diseases ,Animals ,Humans ,RNA, Small Interfering ,skin and connective tissue diseases ,Protein kinase A ,Protein Kinase Inhibitors ,Molecular Biology ,biology ,Kinase ,Pruritus ,Chloroquine ,Cell Biology ,eye diseases ,Rats ,Mice, Inbred C57BL ,Disease Models, Animal ,030104 developmental biology ,chemistry ,Gene Knockdown Techniques ,Mitogen-activated protein kinase ,biology.protein ,Female ,Signal transduction ,Histamine - Abstract
Many itch mediators activate GPCR and trigger itch via activation of GPCR-mediated signaling pathways. GPCRs are desensitized by GPCR kinases (GRKs). The aim of this study is to explore the role of GRKs in itch response and the link between GRKs and glutamine, an amino acid previously shown to be an itch reliever. Itch responses were evoked by histamine, chloroquine, and dinitrochlorobenzene-induced contact dermatitis (CD). Phosphorylation and protein expression were detected by immunofluorescent staining and Western blotting. GRK2 knockdown using small interfering RNA enhanced itch responses evoked by histamine, chloroquine, and dinitrochlorobenzene-induced CD, whereas GRK2 overexpression using GRK2-expressing adenovirus reduced the itch responses. Glutamine reduced all itch evoked by histamine, chloroquine, and dinitrochlorobenzene-induced CD. Glutamine-mediated inhibition of itch was abolished by GRK2 knockdown. Glutamine application resulted in a rapid and strong expression of GRK2 in not only dinitrochlorobenzene-induced CD (within 10 minutes) but also cultured rat dorsal root ganglion cells, F11 (within 1 minute). ERK inhibitor abrogates glutamine-mediated GRK2 expression and inhibition of itch in dinitrochlorobenzene-induced CD. Our data indicate that GRK2 is a key negative regulator of itch and that glutamine attenuates itch via a rapid induction of GRK2 in an ERK-dependent way.
- Published
- 2018
46. Tumorigenic role of YAP in hepatocellular carcinogenesis is involved in SHP2 whose function is different in vitro and in vivo
- Author
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Min-Kyung Kim, Jee Young Park, and Yu Na Kang
- Subjects
Adult ,Male ,0301 basic medicine ,Small interfering RNA ,Carcinoma, Hepatocellular ,Carcinogenesis ,Protein Tyrosine Phosphatase, Non-Receptor Type 11 ,Biology ,medicine.disease_cause ,Pathology and Forensic Medicine ,03 medical and health sciences ,Cell Line, Tumor ,medicine ,Humans ,Adaptor Proteins, Signal Transducing ,Aged ,Cell Proliferation ,Hippo signaling pathway ,Gene knockdown ,Tissue microarray ,Cell growth ,Liver Neoplasms ,YAP-Signaling Proteins ,Cell Biology ,Middle Aged ,Phosphoproteins ,Cell Transformation, Neoplastic ,030104 developmental biology ,Cancer research ,Immunohistochemistry ,Female ,Neoplasm Recurrence, Local ,Transcription Factors ,Proto-oncogene tyrosine-protein kinase Src - Abstract
Yes-associated protein (YAP) is a nuclear effector of the cell-density sensing Hippo pathway and interacts with Src homology phosphotyrosine phosphatase 2 (SHP2), which controls cell proliferation and survival. The tumor promoting/suppressing activities of YAP and SHP2 during liver tumorigenesis remain controversial. This study aimed to investigate the tumorigenic roles of YAP and SHP2 in hepatocellular carcinogenesis. Cell density associated subcellular distributions of YAP and SHP2 in normal human hepatocytes (THLE-2) and hepatocellular carcinoma (HCC) cells (SK-Hep1, SNU-182) were investigated by Western blotting and cell block immunohistochemistry. The effects of YAP knockdown on proliferation, migration and invasion were studied using YAP-specific siRNAs. The prognostic significance of YAP and SHP2 expressions was investigated immunohistochemically using a tissue microarray (TMA) from 50 HCC cases. High-cell density decreased the nuclear expression of YAP and SHP2 in normal hepatocytes as compared with low-cell density. However, in HCC cells, nuclear YAP and SHP2 were observed regardless of cell density. Nuclear YAP influenced SHP2 expression and cell proliferation. In particular, YAP knockdown impacted nuclear levels of SHP2 protein in SK-Hep1 cells. In HCC tissues, nuclear YAP expression was elevated and cytoplasmic SHP2 expression was diminished as compared with adjacent non-tumor tissues. Notably, these expressions were found to be significantly associated with poor recurrence-free and overall survival rate in patients with HCC. Consequently, the tumor promoting role of YAP is involved in SHP2 which functions as a tumor promoter in vitro but as a tumor suppressor in vivo. YAP and SHP2 can be unfavorable prognostic markers in HCC.
- Published
- 2018
47. C5a receptor targeting of partial non-structural protein 3 of dengue virus promotes antigen-specific IFN-γ-producing T-cell responses in a mucosal dengue vaccine model
- Author
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Sae-Hae Kim, Ju Kim, Yu Na Kim, and Yong-Suk Jang
- Subjects
0301 basic medicine ,Antigen Targeting ,T cell ,Immunology ,Dengue Vaccines ,CD8-Positive T-Lymphocytes ,Viral Nonstructural Proteins ,Biology ,Epitope ,Mice ,03 medical and health sciences ,Immune system ,Antigen ,medicine ,Animals ,Cytotoxic T cell ,Antigens ,Antigens, Viral ,Immunity, Mucosal ,Receptor, Anaphylatoxin C5a ,Dengue vaccine ,Microfold cell ,Mice, Inbred BALB C ,Mucous Membrane ,Vaccination ,Dengue Virus ,Disease Models, Animal ,030104 developmental biology ,medicine.anatomical_structure - Abstract
Mucosal vaccination is an ideal strategy to induce protective immunity in both mucosal and parenteral areas. Successful induction of an antigen-specific immune response via mucosal administration essentially requires the effective delivery of antigen into a mucosal immune inductive site, which depends on antigen delivery into M cells. We previously reported that M cells specifically express C5aR, and antigen targeting to C5aR by using specific ligands, including Co1 peptide, promotes the antigen-specific immune response in both mucosal and systemic immune compartments. In this study, we found that application of the Co1 peptide to dengue virus antigen containing CD8 T cell epitopes effectively induced an antigen-specific IFN-γ-producing CD8+ T cell response after oral mucosal administration of antigen. Consequently, we suggest that Co1 peptide-mediated C5aR targeting of antigen into M cells can be used for the induction of an effective antigen-specific CD8+ T cell immune response in oral mucosal vaccine development.
- Published
- 2018
48. Engineered mesenchymal stem-cell-sheets patches prevents postoperative pancreatic leakage in a rat model
- Author
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Robert M. Hoffman, Ji Yoon Park, Teruo Okano, In Kyong Shim, Hye-Jin Yi, Yu Na Lee, Song Cheol Kim, and Seongryong Kim
- Subjects
0301 basic medicine ,Pathology ,medicine.medical_specialty ,Pancreatic leak ,lcsh:Medicine ,Article ,03 medical and health sciences ,Pancreatic Fistula ,0302 clinical medicine ,Postoperative Complications ,Tissue engineering ,medicine ,Animals ,lcsh:Science ,Multidisciplinary ,Abdominal Fluid ,biology ,Tissue Engineering ,Chemistry ,Mesenchymal stem cell ,lcsh:R ,Mesenchymal Stem Cells ,medicine.disease ,Immunohistochemistry ,Magnetic Resonance Imaging ,Rats ,Fibronectin ,Disease Models, Animal ,030104 developmental biology ,Treatment Outcome ,Pancreatic fistula ,030220 oncology & carcinogenesis ,Amylases ,biology.protein ,lcsh:Q ,Stem cell ,Rats, Transgenic ,Biomarkers - Abstract
Post-operative pancreatic fistula (POPF) following pancreatic resection is a life-threatening surgical complication. Cell sheets were prepared and harvested using temperature-responsive culture dishes and transplanted as patches to seal POPF. Two different mesenchymal stem cell (MSC) sheets were compared in terms of the preventative ability for pancreatic leakage in a rat model. Both rat adipose-derived stem cell (rADSC) and bone marrow-derived stem cell (rBMSC) sheets were transplanted. Those rADSC and rBMSC sheets are created without enzymes and thus maintained their cell-cell junctions and adhesion proteins with intact fibronectin on the basal side, as well as characteristics of MSCs. The rats with post-pancreatectomy rADSC- or rBMSC-sheet patches had significantly decreased abdominal fluid leakage compared with the control group, demonstrated by MR image analysis and measurement of the volume of abdominal fluid. Amylase level was significantly lower in the rats with rADSC-sheet and rBMSC-sheet patches compared with the control groups. The rADSC sheet patches had increased adhesive and immune-cytokine profiles (ICAM-1, L-selectin, TIMP-1), and the rBMSC sheets had reduced immune reactions compared to the control. This is first project looking at the feasibility of tissue engineering therapy using MSC-sheets as tissue patches preventing leakage of abdominal fluid caused by POPF.
- Published
- 2018
49. Genetic Characterization of Novel H7Nx Low Pathogenic Avian Influenza Viruses from Wild Birds in South Korea during the Winter of 2020–2021
- Author
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Youn-Jeong Lee, Dong-Hun Lee, Seo Yun Hong, Yoon-Gi Baek, Jung-Hoon Kwon, Jae-In Shin, Kwang-Nyeong Lee, Eun Kyoung Lee, Ra Mi Cha, Mingeun Sagong, Yu-Na Lee, and Gyeong-Beum Heo
- Subjects
Reassortment ,Hemagglutinin (influenza) ,Animals, Wild ,Hemagglutinin Glycoproteins, Influenza Virus ,avian influenza virus ,Influenza A Virus, H7N9 Subtype ,medicine.disease_cause ,Microbiology ,Birds ,Influenza A Virus, H7N3 Subtype ,Virology ,Republic of Korea ,medicine ,Animals ,Gene ,Phylogeny ,Whole genome sequencing ,biology ,Phylogenetic tree ,Zoonotic Infection ,Communication ,phylogenetic analysis ,QR1-502 ,Influenza A virus subtype H5N1 ,Infectious Diseases ,wild bird ,reassortant ,Influenza in Birds ,biology.protein ,H7 ,Neuraminidase - Abstract
Zoonotic infection with avian influenza viruses (AIVs) of subtype H7, such as H7N9 and H7N4, has raised concerns worldwide. During the winter of 2020–2021, five novel H7 low pathogenic AIVs (LPAIVs) containing different neuraminidase (NA) subtypes, including two H7N3, an H7N8, and two H7N9, were detected in wild bird feces in South Korea. Complete genome sequencing and phylogenetic analysis showed that the novel H7Nx AIVs were reassortants containing two gene segments (hemagglutinin (HA) and matrix) that were related to the zoonotic Jiangsu–Cambodian H7 viruses causing zoonotic infection and six gene segments originating from LPAIVs circulating in migratory birds in Eurasia. A genomic constellation analysis demonstrated that all H7 isolates contained a mix of gene segments from different viruses, indicating that multiple reassortment occurred. The well-known mammalian adaptive substitution (E627K and D701N) in PB2 was not detected in any of these isolates. The detection of multiple reassortant H7Nx AIVs in wild birds highlights the need for intensive surveillance in both wild birds and poultry in Eurasia.
- Published
- 2021
50. Identification and potential functions of tRNA-derived small RNAs (tsRNAs) in irritable bowel syndrome with diarrhea
- Author
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Yaoyao Lu, Jian-Li Qiu, Xinru Wang, Xiaojian Zhang, He Zhu, Limin Yang, Chong-Zhen Qin, Duolu Li, Cheng-ye Liu, Guangzhao Qi, Yu-Na Chai, Ying Zhang, and Jingmin Zhang
- Subjects
Adult ,Diarrhea ,Male ,Abdominal pain ,Biology ,Bioinformatics ,Cell Line ,Irritable Bowel Syndrome ,Pathogenesis ,Young Adult ,RNA, Transfer ,medicine ,Humans ,Intestinal Mucosa ,Gene ,Irritable bowel syndrome ,Pharmacology ,High-Throughput Nucleotide Sequencing ,Middle Aged ,Abdominal distension ,medicine.disease ,Biomarker (cell) ,Female ,Tumor necrosis factor alpha ,medicine.symptom ,Biomarkers - Abstract
IBS-D is a functional bowel disease without clear diagnostic markers and exact pathogenesis. Studies have proved that non-coding RNAs participate in IBS-D. However, tRNA-derived small RNAs (tsRNAs), as a new type of non-coding RNAs that are more suitable as markers, remain to be clarified in IBS-D. Hence, we focused on the identification and potential functions of tsRNAs in IBS-D. Intestinal biopsies were obtained from IBS-D patients and healthy volunteers, and twenty-eight differential tsRNAs were screened by high-throughput sequencing. The changes of tiRNA-His-GTG-001, tRF-Ser-GCT-113, and tRF-Gln-TTG-035 by q-PCR in expanded samples were consistent with the sequencing results. Meanwhile, target gene prediction and bioinformatics showed that the three differential tsRNAs may be involved in some key signal pathways, such as GABAergic synapse, tumor necrosis factor-α (TNF-α), etc. Their regulation on target genes were demonstrated through cell experiments and luciferase reporter assays. In addition, the receiver-operating characteristic (ROC) analysis showed that the three tsRNAs all could be used as candidate markers of IBS-D. The correlation analysis indicated they were related to the degree of abdominal pain, abdominal distension, and stool morphology. So, we believe that the abnormal tiRNA-His-GTG-001, tRF-Ser-GCT-113, and tRF-Gln-TTG-035 are related to the clinical symptoms of IBS-D, and can target regulate the important molecules of the brain-gut axis, even could be expected as potential biomarkers for the diagnosis and treatment of IBS-D.
- Published
- 2021
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