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Efforts to concurrently test for enemy release of both above- and belowground enemies for invasive plants in non-native range are limited. Moreover, direct evidence for the causal link between enemy release and performance is rare for invasive plants. Thus, we sought to investigate if above- and/or belowground enemies are involved in the enemy release mechanisms at various life stages of a temperate invader and their consequences on plant community properties. We conducted field surveys of enemy damage and plant performance, and plant-soil feedback experiments in the glasshouses using Ambrosia trifida in both its non-native and native ranges across the seed, seedling, and adult life stages. Field surveys showed that seeds of A. trifida were more severely damaged by aboveground enemies in the native relative to the non-native range, while the difference in leaf damage between ranges was small. Plant-soil feedback experiments showed that release from belowground enemies was also important, as seed germination and plant growth were significantly reduced in soils from the native range compared with soils from the non-native range. Consistent with the above results, A. trifida was larger, produced more seeds, had higher density, and exerted stronger impacts on co-occurring native plants in the non-native relative to the native range. Our results demonstrated that release from both above- and belowground enemies at various life stages contributed to the invasion success of A. trifida in its non-native range and highlighted the importance of considering both above- and belowground enemy release when studying plant invasions.

It is believed that eukaryotes arise from prokaryotes, which means that organelles can form de novo in prokaryotes. Such events, however, had not been observed previously. Here, we report the biogenesis of organelles in the endosymbiotic cyanobacterium TDX16 (prokaryote) that was released from its senescent/necrotic host cell of green alga Haematococcus pluvialis (eukaryote). Microscopic observations showed that organelle biogenesis in TDX16 initiated with cytoplasm compartmentalization, followed by de-compartmentalization, DNA allocation, and re-compartmentalization, as such two composite organelles-the primitive chloroplast and primitive nucleus sequestering minor and major fractions of cellular DNA respectively were formed. Thereafter, the eukaryotic cytoplasmic matrix was built up from the matrix extruded from the primitive nucleus; mitochondria were assembled in and segregated from the primitive chloroplast, whereby the primitive nucleus and primitive chloroplast matured into the nucleus and chloroplast respectively. While mitochondria subsequently turned into double-membraned vacuoles after matrix degradation. Results of pigment analyses, 16S rRNA and genome sequencing revealed that TDX16 is a phycocyanin-containing cyanobacterium resembling Chroococcidiopsis thermalis, which had acquired 9,017,401 bp DNAs with 10,301 genes from its host. Accordingly, we conclude that organelle biogenesis in TDX16 is achieved by hybridizing the acquired eukaryotic DNAs with its own one and expressing the hybrid genome. The formation of organelles in cyanobacterium TDX16 is the first case of organelle biogenesis in prokaryotes observed so far, which sheds an unprecedented light on eukaryotes and their connections with prokaryotes, and thus has broad implications on biology.

Pancreatic adenocarcinoma (PAAD), the most common subtype of pancreatic cancer, is a highly lethal disease. In this study, we integrated the expression profiles of splicing factors (SFs) of PAAD from RNA-sequencing data to provide a comprehensive view of the clinical significance of SFs. A prognostic index (PI) based on SFs was developed using the least absolute shrinkage and selection operator (LASSO) COX analysis. The PI exhibited excellent performance in predicting the status of overall survival of PAAD patients. We also used the percent spliced in (PSI) value obtained from SpliceSeq software to quantify different types of alternative splicing (AS). The prognostic value of AS events was explored using univariate COX and LASSO COX analyses; AS-based PIs were also proposed. The integration of prognosis-associated SFs and AS events suggested the potential regulatory mechanisms of splicing processes in PAAD. This study defined the markedly clinical significance of SFs and provided novel insight into their potential regulatory mechanisms.

It is generally accepted that eukaryotic cell arises from prokaryotic cell, which means that organelle can be formed in prokaryotic cell. However, no such an instance has been detected till now. Here, we report organelle biogenesis in the endosymbiotic cyanobacterium TDX16 released from the green alga Haematococcus pluvialis, which occurred through six steps. (1) An inner intracytoplasmic membrane (IIM), an outer intracytoplasmic membrane (OIM) and an intervening peptidoglycan-like layer (PL) were synthesized by merging cytoplasmic membrane (CM)-derived thick margin vesicles, which partitioned the thylakoid-less cytoplasm into three compartments: an inner cytoplasm (ICP), an outer cytoplasm (OCP) and a sandwiched intracytoplasmic space (IS). (2) Osmiophilic granules that blistered from CM, OIM and IIM developed into primary thylakoids (PT) in ICP; while OCP disappeared and thus OIM and CM combined into a double-membraned cytoplasmic envelope (CE). (3) ICP decondensed; IIM and PT disassembled into tiny vesicles (TV) and double-membraned vesicles (DMV) respectively. Such that DNA fibers (DF) aggregated and migrated to PL. (4) TV fused into a double-membraned intracytoplasmic envelope (ICE), which re-compartmentalized the coalesced IS and ICP into a new intracytoplasmic space (NS) sequestering most DF and a new inner cytoplasm (NIC) with only few DF. Then ribosomes were formed in both NS and NIC, while DMV opened and extended into secondary thylakoids (ST) only in NIC. (5) NIC developed into the primitive chloroplast (PC) surrounded by ICE, in which ST disassembled, while ST-derived plastoglobuli developed into primitive eukaryotic thylakoids (PMT). After PL dismantled, the matrix of NS was concentrated and encased with the membranes synthesized from ICE-derived dotted vesicles into the primitive nucleus (PN). So, NS vanished, CE wrapped PC and PN. Outside CE, eukaryotic cell wall was formed by assembling sheath at the outer membrane of original cell wall and modifying the peptidoglycan layer. (6) Eukaryotic cytoplasm was built up from the matrix extruded from PN. Mitochondria were assembled in and segregated from PC by encapsulating a portion of stroma with the membranes synthesized from PMT-derived dense-margined vesicles. Then, most mitochondria turned into double-membraned vacuoles after matrix degradation, which mediated unconventional exocytosis and endocytosis. When this process finished, PN got matured into a nucleus enclosed by two sets of envelopes; PC matured into a chloroplast with its PMT maturing into thylakoids. Consequently, the prokaryotic TDX16 cell developed into a eukaryotic cell (TDX16-DE). Results of pigment analyses and 16S rRNA sequencing revealed that TDX16-DE chloroplast contained chlorophyll b and lutein showing 99% similarity to that of Chlorella vulgaris, TDX16 was a phycocyanin-containing cyanobacterium resembling Chroococcidiopsis thermalis (98% identity). Whereas, TDX16 genome size (15,333,193 bp) and gene number (13,415) were 2.43 and 2.40 times those of C. thermalis (6,315,792 bp; 5593 genes) respectively, indicating that TDX16 acquired at least 7822 genes from its host H. pluvialis. Therefore, the mechanism underlying organelle biogenesis in TDX16 was the integration and expression of the obtained genes.

The fungal community composition, size and several physico-chemical properties were individually investigated in ten macrophyte rhizospheric substrates using nested PCR-denaturing gradient gel electrophoresis and soil chemical methods. Results indicated that both Dothideomycetes and Sordariomycetes were dominant fungi in macrophyte rhizospheric substrates, and denitrifying fungi (Fusarium graminearum) was found in nine of ten macrophyte rhizospheres. Fungal Shannon-Wiener diversity index (H) and richness (S) in Thalia dealbata, Typha latifolia, Iris hexagona and Hemerocallis aurantiaca rhizospheres were higher than those in other six rhizospheres. Fungal number and biomass were 1.91 × 103 CFUs g−1 dw and 1.53 μg ergosterol g−1 dw in Iris pseudacor rhizosphere, and were greater than in other nine rhizospheres. The correlation analysis showed that fungal number and biomass significantly and positively correlated to total soil phosphorus, while fungal H and S were significantly and negatively correlated to total organic carbon. The principal components analysis (PCA) showed that the fungal community significantly divided ten macrophyte rhizospheres into four groups, showing the significant difference of fungal communities among ten rhizospheric substrates. The current study revealed for the first time the importance of rhizospheric fungal community in distinguishing macrophyte rhizospheres, thus will undoubtedly widen our insight into fungal communities in aquatic rhizospheres.

Fascin, an actin-cross-linking protein, is up-regulated in breast cancer and correlates with a more aggressive disease. This study was conducted to elucidate the effects of manipulating fascin in breast cancer cells on the metastasis-associated events, including proliferation, adhesion, invasion, epithelial–mesenchymal transition (EMT) and enrichment of a CD44+/CD24− subpopulation that show some stem/progenitor cell properties. Western blot analysis of a panel of breast cancer cell lines revealed high expression of fascin in MDA-MB-435 and MDA-MB-231 cells but revealed no or low expression in MDA-MB-453, Her-18 and T47D. Gain-of-function and loss-of-function studies in breast cancer cells demonstrated that forced expression of fascin promoted cell proliferation assessed by the MTT assay, decreased cellular adhesion to fibronectin and potentiated the invasive capacity in the Transwell chamber invasion assay. Conversely, down-regulation of fascin via small interfering RNA increased cell adhesion and facilitated cell proliferation and invasion. In addition, fascin participated in the EMT and modulated the proportion of the CD44+/CD24− subpopulation in breast cancer cells. In conclusion, our data highlight an important role for fascin in breast cancer progression in vitro through orchestrating a variety of cellular events associated with metastasis, and thus, targeting this gene might have therapeutic implications. Copyright © 2011 John Wiley & Sons, Ltd.

Inflammatory myofibroblastic tumors (IMTs) are uncommon, mesenchymal lesions, and malignant transformation is extremely rare. The current study presents the case of a 56-year-old female with a rapidly growing mass in the right breast, which was diagnosed as IMT. Immunohistochemically, the mass was positive for smooth muscle actin (SMA) and Ki-67 (positive staining in 30% of the cells), and negative for S-100, cluster of differentiation (CD)34, p63 and cytokeratin. Malignant transformation to metaplastic carcinoma of the spindle-cell type was observed following surgical resection. This metaplastic carcinoma demonstrated positive immunoreactivity for cytokeratin, vimentin, CD34, p63 and Ki-67 (>30%), and was negative for cytokeratin 7, SMA, desmin and S-100. The patient underwent total mastectomy of the right breast, followed by palliative chemotherapy with capecitabine; however, the patient succumbed to the disease after 12 weeks. The unusual case presented in the current study emphasizes the importance of pre-operative examinations to determine the benign or malignant nature of IMTs, which aids in the choice of appropriate surgical procedures.