69 results on '"L. Ivanova"'
Search Results
2. Human Diploid Fibroblast Cell Lines — a Model System for Studying Immunodulatory Properties of Modern Immunobiological Drugs and Viruses
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S V Ozherelkov, Sanin Av, A A Ishmuhametov, A L Ivanova, O I Konyuschko, M F Vorovich, S E Sotskova, and Kozhevnikova Tn
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Time Factors ,Interleukin-1beta ,Drug Evaluation, Preclinical ,Tick-borne encephalitis vaccine ,Model system ,Vesicular stomatitis Indiana virus ,General Biochemistry, Genetics and Molecular Biology ,Cell Line ,Encephalitis Viruses, Tick-Borne ,Ticks ,Polyisoprenyl Phosphates ,medicine ,Animals ,Humans ,Immunologic Factors ,Fibroblast ,Skin ,Inflammation ,biology ,Interleukin-6 ,Muscles ,Interleukin-8 ,Interleukin-18 ,General Medicine ,Fibroblasts ,biology.organism_classification ,medicine.disease ,Diploidy ,Virology ,Interleukin-10 ,medicine.anatomical_structure ,Cell culture ,Vesicular stomatitis virus ,Phosprenyl ,Ploidy ,Encephalitis - Abstract
The immunomodulatory properties of immunobiological drugs Glutoxim and Phosprenyl we well as vesicular stomatitis virus and inactivated tick-borne encephalitis vaccine virus were studied using human diploid fibroblast cell line from the collection of M. P. Chumakov Federal Research Center for Research and Development of Immunobiological Products. All tested preparations exhibited immunomodulatory activity in human diploid fibroblast cell line. Glutoxim in doses of 0.1 and 0.25 μg/ml stimulated production of IL-6 and IL-10 during 24-48 h of culturing, but did not stimulate production of IL-1β. Phosprenyl, on the contrary, increased production of IL-1β and the levels of IL-6 and IL-10. Vesicular stomatitis virus stimulated the production of IL-1β, IL-6, and IL-10, while inactivated tick-borne encephalitis vaccine virus stimulated the production of cytokines IL-8 and IL-18. Immunomodulatory activity of inactivated tick-borne encephalitis vaccine virus was first demonstrated in the in vitro system.
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- 2020
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3. Development of Specific Features of Marsh Frog (Pelophylax ridibundus) Populations in Water Bodies of the Middle Urals
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N. L. Ivanova and D. L. Berzin
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geography ,Marsh ,geography.geographical_feature_category ,Ecology ,Pelophylax ridibundus ,biology.animal ,Ecology (disciplines) ,Biology ,Ecology, Evolution, Behavior and Systematics - Published
- 2019
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4. NK Cells Negatively Regulate CD8 T Cells to Promote Immune Exhaustion and Chronic Toxoplasma gondii Infection
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Daria L. Ivanova, Ryan Krempels, Stephen L. Denton, Kevin D. Fettel, Giandor M. Saltz, David Rach, Rida Fatima, Tiffany Mundhenke, Joshua Materi, Ildiko R. Dunay, and Jason P. Gigley
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0301 basic medicine ,Microbiology (medical) ,LAG3 ,T cell ,030106 microbiology ,Immunology ,lcsh:QR1-502 ,Toxoplasma gondii ,NK cells ,Microbiology ,lcsh:Microbiology ,03 medical and health sciences ,Immune system ,medicine ,Cytotoxic T cell ,biology ,chronic infection ,Acquired immune system ,biology.organism_classification ,Chronic infection ,030104 developmental biology ,Infectious Diseases ,medicine.anatomical_structure ,ILC ,CD8 T cell exhaustion ,CD8 - Abstract
NK cells regulate CD4+ and CD8+ T cells in acute viral infection, vaccination, and the tumor microenvironment. NK cells also become exhausted in chronic activation settings. The mechanisms causing these ILC responses and their impact on adaptive immunity are unclear. CD8+ T cell exhaustion develops during chronic Toxoplasma gondii (T. gondii) infection resulting in parasite reactivation and death. How chronic T. gondii infection impacts the NK cell compartment is not known. We demonstrate that NK cells do not exhibit hallmarks of exhaustion. Their numbers are stable and they do not express high PD1 or LAG3. NK cell depletion with anti-NK1.1 is therapeutic and rescues chronic T. gondii infected mice from CD8+ T cell exhaustion dependent death, increases survival after lethal secondary challenge and alters cyst burdens in brain. Anti-NK1.1 treatment increased polyfunctional CD8+ T cell responses in spleen and brain and reduced CD8+ T cell apoptosis in spleen. Chronic T. gondii infection promotes the development of a modified NK cell compartment, which does not exhibit normal NK cell characteristics. NK cells are Ly49 and TRAIL negative and are enriched for expression of CD94/NKG2A and KLRG1. These NK cells are found in both spleen and brain. They do not produce IFNγ, are IL-10 negative, do not increase PDL1 expression, but do increase CD107a on their surface. Based on the NK cell receptor phenotype we observed NKp46 and CD94-NKG2A cognate ligands were measured. Activating NKp46 (NCR1-ligand) ligand increased and NKG2A ligand Qa-1b expression was reduced on CD8+ T cells. Blockade of NKp46 rescued the chronically infected mice from death and reduced the number of NKG2A+ cells. Immunization with a single dose non-persistent 100% protective T. gondii vaccination did not induce this cell population in the spleen, suggesting persistent infection is essential for their development. We hypothesize chronic T. gondii infection induces an NKp46 dependent modified NK cell population that reduces functional CD8+ T cells to promote persistent parasite infection in the brain. NK cell targeted therapies could enhance immunity in people with chronic infections, chronic inflammation and cancer.
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- 2020
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5. A novel neural stem cell-derived immunocompetent mouse model of glioblastoma for preclinical studies
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Lukas Bunse, Ekaterina L Ivanova, Hai-Kun Liu, Sabrina Lohr, Michael Nc Fletcher, Andrey Korshunov, Michael Platten, Tanja Eisemann, Peter Angel, Martin Loewer, Pavle Boskovic, Stefanie Burchard, Bernhard Radlwimmer, Heike Peterziel, and Barbara Costa
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Myeloid ,Cell ,Brain tumor ,Biology ,medicine.disease ,Neural stem cell ,nervous system diseases ,Transcriptome ,medicine.anatomical_structure ,Cell culture ,Glioma ,medicine ,Cancer research ,biology.protein ,PTEN ,neoplasms - Abstract
Glioblastomas are the most lethal tumors affecting the central nervous system in adults. Simple and inexpensive syngeneicin vivomodels that closely mirror human glioblastoma, including interactions between tumor and immune cells, are urgently needed for deciphering glioma biology and developing more effective treatments. Here, we generated glioblastoma cell lines by repeatedin-vivopassaging of cells isolated from a neural stem cell-specific Pten/p53 double-knockout genetic mouse brain tumor model. Transcriptome and genome analyses of the cell lines revealed molecular heterogeneity comparable to that observed in human glioblastoma. Upon orthotopic transplantation into syngeneic hosts they formed high-grade gliomas that faithfully recapitulated the histopathological features, invasiveness and myeloid cell infiltration characteristic of human glioblastoma. These features make our cell lines unique and useful tools to study multiple aspects of glioblastoma pathomechanism and test novel treatments, especially immunotherapies in syngeneic preclinical models.
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- 2020
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6. Conditional switching of KIF2A mutation provides new insights into cortical malformation pathogeny
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Maria Osipenko, Hamid Meziane, Binnaz Yalcin, Gabrielle Rudolf, John S. Allingham, Ekaterina L. Ivanova, Maria-Victoria Hinckelmann, Loic Broix, Johan G. Gilet, Valerie Skory, Benjamin H. Kwok, Marie-Christine Birling, Jérémie Courraud, Daria Trofimova, Nathalie Drouot, Jamel Chelly, Nadia Bahi-Buisson, Paul Voulleminot, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Queen's University [Kingston, Canada], Fédération de Médecine Translationnelle de Strasbourg (FMTS), Université de Strasbourg (UNISTRA), Institut Clinique de la Souris (ICS), French National Infrastructure for Mouse Phenogenomics (PHENOMIN), Service de Neurologie [CHU Strasbourg], Hôpital de Hautepierre [Strasbourg]-Centre Hospitalier Universitaire de Strasbourg (CHU de Strasbourg ), Imagine - Institut des maladies génétiques (IHU) (Imagine - U1163), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité), Institut de Recherche en Immunologie et en Cancérologie [UdeM-Montréal] (IRIC), Université de Montréal (UdeM), Laboratoire de Diagnostic Génétique [CHU Strasbourg], Université de Strasbourg (UNISTRA)-CHU Strasbourg, EU Seventh Framework Programme FP7 under the projects GENCODYS (COLLABORATION PROJECT-2009-2.1.1-1/241995 to Ja.C.), DESIRE (grant agreement no. 602531 to Ja.C.), the French state funds through the ‘Agence Nationale de la Recherche’ under the projects ANR-15-CE16–0018-01 and the programme Investissements d’Avenir labeled (ANR-10-IDEX-0002-02, ANR-10-LABX-0030-INRT to B.Y. and Ja.C.)., ANR-10-IDEX-0002,UNISTRA,Par-delà les frontières, l'Université de Strasbourg(2010), European Project: 241995,EC:FP7:HEALTH,FP7-HEALTH-2009-two-stage,GENCODYS(2010), European Project: 602531,HEALTH,FP7-HEALTH-2013-INNOVATION-1,DESIRE(2013), YALCIN, Binnaz, Initiative d'excellence - Par-delà les frontières, l'Université de Strasbourg - - UNISTRA2010 - ANR-10-IDEX-0002 - IDEX - VALID, Genetic and Epigenetic Networks in Cognitive Dysfunction - GENCODYS - - EC:FP7:HEALTH2010-05-01 - 2015-04-30 - 241995 - VALID, Development and Epilepsy - Strategies for Innovative Research to improve diagnosis, prevention and treatment in children with difficult to treat Epilepsy - DESIRE - - HEALTH2013-01-01 - 2018-09-30 - 602531 - VALID, and Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Paris (UP)
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Male ,Microcephaly ,hippocampus ,mouse model ,[SDV.NEU.NB]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/Neurobiology ,Kinesins ,Hippocampus ,[SDV.GEN] Life Sciences [q-bio]/Genetics ,Biology ,medicine.disease_cause ,knock-in ,Mice ,03 medical and health sciences ,Epilepsy ,0302 clinical medicine ,Gene knockin ,Genetics ,medicine ,Animals ,Missense mutation ,Molecular Biology ,Genetics (clinical) ,030304 developmental biology ,Mice, Knockout ,Neurons ,0303 health sciences ,Mutation ,videomicroscopy ,neuronal migration ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,Behavior, Animal ,Transition (genetics) ,[SDV.NEU.NB] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/Neurobiology ,apoptosis ,General Medicine ,General Article Two ,malformations of cortical development ,medicine.disease ,in utero electroporation ,microtubule dynamics ,Phenotype ,Mice, Inbred C57BL ,Repressor Proteins ,cortex ,Neuroscience ,030217 neurology & neurosurgery ,KIF2A - Abstract
By using the Cre-mediated genetic switch technology, we were able to successfully generate a conditional knock-in mouse, bearing the KIF2A p.His321Asp missense point variant, identified in a subject with malformations of cortical development. These mice present with neuroanatomical anomalies and microcephaly associated with behavioral deficiencies and susceptibility to epilepsy, correlating with the described human phenotype. Using the flexibility of this model, we investigated RosaCre-, NestinCre- and NexCre-driven expression of the mutation to dissect the pathophysiological mechanisms underlying neurodevelopmental cortical abnormalities. We show that the expression of the p.His321Asp pathogenic variant increases apoptosis and causes abnormal multipolar to bipolar transition in newborn neurons, providing therefore insights to better understand cortical organization and brain growth defects that characterize KIF2A-related human disorders. We further demonstrate that the observed cellular phenotypes are likely to be linked to deficiency in the microtubule depolymerizing function of KIF2A.
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- 2020
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7. New principles and possibilities for creation of immunobiological preparations and treatment of animal diseases
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L. Ivanova and I. Polyakov
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General Engineering ,Biology - Published
- 2018
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8. Growth characteristics and rates of the mash frog Pelophylax ridibundus Pall. introduced into water bodies of the Middle Urals
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N. L. Ivanova
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0301 basic medicine ,education.field_of_study ,030102 biochemistry & molecular biology ,biology ,Life span ,Frequency of occurrence ,Ecology ,Pelophylax ridibundus ,media_common.quotation_subject ,Population ,Zoology ,04 agricultural and veterinary sciences ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Age groups ,biology.animal ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Age composition ,Metamorphosis ,General Agricultural and Biological Sciences ,education ,media_common - Abstract
The characteristics and growth rates of mash frogs introduced upon the completion of metamorphosis into the cooling ponds of heating stations have been studied. The age composition of frog populations has been determined. It has been shown that an extra year must be added to the visible adhesion lines in the tissue of long bones. It has been found that the population of mash frogs inhabiting the Verkhnii Tagil Reservoir is characterized by not only a longer life span than in the Reftinskoe Reservoir, but also by a sufficiently high frequency of occurrence in the samples of older age groups.
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- 2017
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9. NK cells negatively regulate CD8 T cells to promote immune exhaustion and chronicToxoplasma gondiiinfection
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Daria L. Ivanova, Stephen L. Denton, Rida Fatima, Giandor M. Saltz, Kevin D. Fettel, Ryan Krempels, Tiffany M. Mundhenke, Joshua Materi, Jason P. Gigley, Ildiko Rita Dunay, and David Rach
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education.field_of_study ,LAG3 ,biology ,T cell ,Population ,Toxoplasma gondii ,Acquired immune system ,biology.organism_classification ,Immune system ,medicine.anatomical_structure ,Immunology ,medicine ,Cytotoxic T cell ,education ,CD8 - Abstract
NK cells regulate CD4+ and CD8+ T cells in acute viral infection, vaccination and the tumor microenvironment. NK cells also become exhausted in chronic activation settings. The mechanisms causing these ILC responses and their impact on adaptive immunity are unclear. CD8+ T cell exhaustion develops during chronicToxoplasma gondii(T. gondii) infection resulting in parasite reactivation and death. How chronicT. gondiiinfection impacts the NK cell compartment is not known. We demonstrate that NK cells do not exhibit hallmarks of exhaustion. Their numbers are stable and they do not express high PD1 or LAG3. NK cell depletion with anti-NK1.1 is therapeutic and rescues chronicT. gondiiinfected mice from CD8+ T cell exhaustion dependent death, increases survival after lethal secondary challenge and reduces parasite reactivation. Anti-NK1.1 treatment increased polyfunctional CD8+ T cell responses in spleen and brain and reduced CD8+ T cell apoptosis. ChronicT. gondiiinfection promotes the development of a modified NK cell compartment, which does not exhibit normal NK cell behavior. This splenic CD49a-CD49b+NKp46+ NK cell population develops during the early chronic phase of infection and increases through the late chronic phase of infection. They are Ly49 and TRAIL negative and are enriched for expression of CD94/NKG2A and KLRG1. They do not produce IFNγ, are IL-10 negative, do not increase PDL1 expression, but do increase CD107a on their surface. They are also absent from brain. Based on the NK cell receptor phenotype we observed NKp46 and CD94-NKG2A cognate ligands were measured. Activating NKp46 (NCR1-ligand) ligand increased and NKG2A ligand Qa-1b expression was reduced. Blockade of NKp46 also rescued the chronically infected mice from death. Immunization with a single dose non-persistent 100% protectiveT. gondiivaccination did not induce this cell population in the spleen, suggesting persistent infection is essential for their development. We hypothesize chronicT. gondiiinfection induces an NKp46 dependent modified NK cell population that reduces functional CD8+ T cells to promote persistent parasite infection in the brain. NK cell targeted therapies could enhance immunity in people with chronic infections, chronic inflammation and cancer.
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- 2019
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10. TUBG1 missense variants underlying cortical malformations disrupt neuronal locomotion and microtubule dynamics but not neurogenesis
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Nathalie Drouot, Patrick Nusbaum, William Magnant, Binnaz Yalcin, Arnaud Duchon, Loic Broix, Jamel Chelly, Valerie Skory, Stephan C. Collins, Maria-Victoria Hinckelmann, Vadym Sulimenko, Yann Herault, Marie-Christine Birling, Juliette D. Godin, Guillaume Pavlovic, Pavel Dráber, Karen Runge, Laure Asselin, Ekaterina L. Ivanova, Gabrielle Rudolf, Peggy Tilly, Alexandre Vincent, Johan G. Gilet, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA), Institut Cochin (IC UM3 (UMR 8104 / U1016)), Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut de génétique et biologie moléculaire et cellulaire (IGBMC), Université Louis Pasteur - Strasbourg I-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Hôpital Cochin [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Institut Clinique de la Souris (ICS), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Biology of Cytoskeleton, Institute of Molecular Genetics, Centre for Integrative Biology - CBI (Inserm U964 - CNRS UMR7104 - IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institute of Molecular Genetics of the Czech Academy of Sciences (IMG / CAS), Czech Academy of Sciences [Prague] (CAS), UFR Sciences de la Vie, de la Terre et de l'Environnement (Université de Bourgogne) (UFR SVTE), Université de Bourgogne (UB), French National Infrastructure for Mouse Phenogenomics (PHENOMIN), Fédération de Médecine Translationnelle de Strasbourg (FMTS), Université de Strasbourg (UNISTRA), Les Hôpitaux Universitaires de Strasbourg (HUS), and Herault, Yann
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Male ,0301 basic medicine ,Intravital Microscopy ,TUBG1 ,General Physics and Astronomy ,[SDV.GEN] Life Sciences [q-bio]/Genetics ,02 engineering and technology ,medicine.disease_cause ,Microtubules ,Mice ,Epilepsy ,Cell Movement ,Tubulin ,Missense mutation ,Gene Knock-In Techniques ,lcsh:Science ,ComputingMilieux_MISCELLANEOUS ,Cerebral Cortex ,Neurons ,Mutation ,Microscopy, Confocal ,[SDV.MHEP] Life Sciences [q-bio]/Human health and pathology ,Multidisciplinary ,Behavior, Animal ,Electroporation ,Neurogenesis ,021001 nanoscience & nanotechnology ,Malformations of Cortical Development ,Female ,0210 nano-technology ,Science ,Transgene ,Mutation, Missense ,Mice, Transgenic ,Biology ,Article ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Developmental biology ,medicine ,Animals ,Humans ,Genetic Predisposition to Disease ,Centrosome ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,Disease model ,Development of the nervous system ,General Chemistry ,Fibroblasts ,Embryo, Mammalian ,medicine.disease ,Disease Models, Animal ,Microscopy, Electron ,030104 developmental biology ,lcsh:Q ,Neuroscience ,[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology ,HeLa Cells - Abstract
De novo heterozygous missense variants in the γ-tubulin gene TUBG1 have been linked to human malformations of cortical development associated with intellectual disability and epilepsy. Here, we investigated through in-utero electroporation and in-vivo studies, how four of these variants affect cortical development. We show that TUBG1 mutants affect neuronal positioning, disrupting the locomotion of new-born neurons but without affecting progenitors’ proliferation. We further demonstrate that pathogenic TUBG1 variants are linked to reduced microtubule dynamics but without major structural nor functional centrosome defects in subject-derived fibroblasts. Additionally, we developed a knock-in Tubg1Y92C/+ mouse model and assessed consequences of the mutation. Although centrosomal positioning in bipolar neurons is correct, they fail to initiate locomotion. Furthermore, Tubg1Y92C/+ animals show neuroanatomical and behavioral defects and increased epileptic cortical activity. We show that Tubg1Y92C/+ mice partially mimic the human phenotype and therefore represent a relevant model for further investigations of the physiopathology of cortical malformations., New mutations and genes associated with malformations of cortical development keep being identified, yet there is little known about the underlying cellular mechanisms controlling these impairments. Here, authors generate and characterize a heterozygous TUBG1 knock-in mouse model bearing one of these known mutations and show that TUBG1 mutation leads to the miss-positioning of neurons in the cortical wall due to migration, because of defective microtubules dynamics, and not proliferation defects during corticogenesis.
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- 2019
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11. The IL-12– and IL-23–Dependent NK-Cell Response is Essential for Protective Immunity Against Secondary Toxoplasma Gondii Infection
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Daria L. Ivanova, Tiffany M. Mundhenke, and Jason P. Gigley
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0303 health sciences ,Adoptive cell transfer ,T cell ,Secondary infection ,Immunology ,Cell ,Toxoplasma gondii ,Biology ,biology.organism_classification ,3. Good health ,03 medical and health sciences ,medicine.anatomical_structure ,0302 clinical medicine ,In vivo ,Immunity ,medicine ,Interleukin 12 ,Interleukin 23 ,Immunology and Allergy ,Cytotoxic T cell ,CD8 ,030304 developmental biology ,030215 immunology - Abstract
NK cells can develop cell-intrinsic memory-like characteristics. Whether they develop these characteristics during Toxoplasma gondii infection is unknown. We addressed this question and dissected the mechanisms involved in secondary NK cell responses using a vaccine-challenge mouse model of T. gondii infection. NK cells were required for control of and survival after secondary T. gondii infection. NK cells increased in number at the reinfection site and produced IFN-γ. To test if these T. gondii experienced NK cells were intrinsically different from naive NK cells, we performed NK cell adoptive transfer into RAG2/cγ-chain−/− mice, NK cell fate mapping, and RAG1−/− mice vaccine-challenge experiments. Although NK cells contributed to immunity after reinfection, they did not develop cell-intrinsic memory-like characteristics after T. gondii vaccination. The mechanisms required for generating these secondary NK cell responses were investigated. Secondary NK cell responses were CD4+ or CD8+ T cell independent. Although IL-12 alone is required for NK cell IFN-γ production during primary T. gondii infection, in the absence of IL-12 using IL-12p35−/− mice or anti–IL-12p70, secondary NK cell responses were only partially reduced after reinfection. IL-23 depletion with anti–IL-23p19 in vivo also significantly reduced the secondary NK cell response. IL-12 and IL-23 blockade with anti–IL-12p40 treatment completely eliminated secondary NK cell responses. Importantly, blockade of IL-12, IL-23, or both significantly reduced control of parasite reinfection and increased parasite burden. Our results define a previously unknown protective role for NK cells during secondary T. gondii infection that is dependent on IL-12 and IL-23.
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- 2019
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12. Innate Lymphoid Cells in Protection, Pathology, and Adaptive Immunity During Apicomplexan Infection
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Berit Bangoura, Kevin D. Fettel, Juan Muñoz Gutiérrez, Stephen L. Denton, Ildiko Rita Dunay, Jason P. Gigley, Kerry S. Sondgeroth, and Daria L. Ivanova
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lcsh:Immunologic diseases. Allergy ,0301 basic medicine ,Plasmodium ,Population ,Immunology ,Cell Plasticity ,Review ,Biology ,Adaptive Immunity ,Host-Parasite Interactions ,Immunophenotyping ,IFN-gamma ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Immunity ,Immunopathology ,Immunology and Allergy ,Animals ,Humans ,Lymphopoiesis ,innate lymphoid cells (ILC) ,education ,IL-12 family ,education.field_of_study ,Innate immune system ,Protozoan Infections ,Innate lymphoid cell ,Acquired immune system ,Immunity, Innate ,Lymphocyte Subsets ,3. Good health ,IL-17 ,030104 developmental biology ,apicomplexan parasites ,Cytokines ,Inflammation Mediators ,lcsh:RC581-607 ,Apicomplexa ,Biomarkers ,030215 immunology - Abstract
Apicomplexans are a diverse and complex group of protozoan pathogens including Toxoplasma gondii, Plasmodium spp., Cryptosporidium spp., Eimeria spp., and Babesia spp. They infect a wide variety of hosts and are a major health threat to humans and other animals. Innate immunity provides early control and also regulates the development of adaptive immune responses important for controlling these pathogens. Innate immune responses also contribute to immunopathology associated with these infections. Natural killer (NK) cells have been for a long time known to be potent first line effector cells in helping control protozoan infection. They provide control by producing IL-12 dependent IFNγ and killing infected cells and parasites via their cytotoxic response. Results from more recent studies indicate that NK cells could provide additional effector functions such as IL-10 and IL-17 and might have diverse roles in immunity to these pathogens. These early studies based their conclusions on the identification of NK cells to be CD3–, CD49b+, NK1.1+, and/or NKp46+ and the common accepted paradigm at that time that NK cells were one of the only lymphoid derived innate immune cells present. New discoveries have lead to major advances in understanding that NK cells are only one of several populations of innate immune cells of lymphoid origin. Common lymphoid progenitor derived innate immune cells are now known as innate lymphoid cells (ILC) and comprise three different groups, group 1, group 2, and group 3 ILC. They are a functionally heterogeneous and plastic cell population and are important effector cells in disease and tissue homeostasis. Very little is known about each of these different types of ILCs in parasitic infection. Therefore, we will review what is known about NK cells in innate immune responses during different protozoan infections. We will discuss what immune responses attributed to NK cells might be reconsidered as ILC1, 2, or 3 population responses. We will then discuss how different ILCs may impact immunopathology and adaptive immune responses to these parasites.
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- 2019
13. Am J Hum Genet
- Author
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Robert Smigiel, Géraldine Joly-Helas, Linyan Meng, Gregory M. Cooper, Nolwenn Jean-Marçais, Christel Thauvin-Robinet, Bruno Kieffer, Christopher T. Gordon, Laurence Faivre, Rhonda E. Schnur, Sarah L. Dugan, Seema R. Lalani, Heather C Mefford, Susan M. Hiatt, Marlène Rio, Seiamak Bahram, Jamel Chelly, Caroline Schluth-Bolard, Tatiana Tvrdik, Alison M. Muir, Eva Erdmann, Aline Kolmer, Aurore Garde, Angélique Pichot, Raphael Carapito, Mary K. Kukolich, Andrea M. Lewis, David Hunt, Clémantine Dimartino, Aurore Morlon, Anne Molitor, Ingrid M. Wentzensen, Fabien Dutreux, Nicodème Paul, Carlos A. Bacino, Nina B. Gold, Frédéric Tran Mau-Them, Olaf Bodamer, Deciphering Developmental Disorders Study, Zijie Sun, Pinar Bayrak-Toydemir, Heather P. Crawford, Victoria Harrison, Jocelyn Céraline, Jeanne Amiel, Mira Kharbanda, Christina Hung, A. Hanauer, Anne-Marie Guerrot, David Viskochil, Bertrand Isidor, Maya Chopra, Kirsty McWalter, Lydie Naegely, Meredith Phillips, Xia Wang, Rafał Płoski, Noel Mensah-Bonsu, Ekaterina L. Ivanova, Magalie S. Leduc, Immuno-Rhumatologie Moléculaire, Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM), Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Equipe GAD (LNC - U1231), Lipides - Nutrition - Cancer [Dijon - U1231] (LNC), Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Bourgogne (UB)-AgroSup Dijon - Institut National Supérieur des Sciences Agronomiques, de l'Alimentation et de l'Environnement-Institut National de la Santé et de la Recherche Médicale (INSERM), FHU TRANSLAD (CHU de Dijon), Centre Hospitalier Universitaire de Dijon - Hôpital François Mitterrand (CHU Dijon), Imagine - Institut des maladies génétiques (IMAGINE - U1163), Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université Paris Descartes - Paris 5 (UPD5), Centre de recherche en neurosciences de Lyon (CRNL), Université Claude Bernard Lyon 1 (UCBL), and Université de Lyon-Université de Lyon-Université Jean Monnet [Saint-Étienne] (UJM)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)
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0301 basic medicine ,Male ,Microcephaly ,[SDV]Life Sciences [q-bio] ,Developmental Disabilities ,Aucun ,Biology ,030226 pharmacology & pharmacy ,Transactivation ,03 medical and health sciences ,Mice ,Neurodevelopmental disorder ,0302 clinical medicine ,Report ,Intellectual Disability ,Coactivator ,medicine ,Genetics ,Animals ,Humans ,Point Mutation ,Allele ,Child ,Exome ,Genetics (clinical) ,Alleles ,030304 developmental biology ,0303 health sciences ,Point mutation ,Correction ,Infant ,Syndrome ,medicine.disease ,Androgen receptor ,030104 developmental biology ,Child, Preschool ,Female ,030217 neurology & neurosurgery ,Transcription Factors - Abstract
ZMIZ1 is a coactivator of several transcription factors, including p53, the androgen receptor, and NOTCH1. Here, we report 19 subjects with intellectual disability and developmental delay carrying variants in ZMIZ1. The associated features include growth failure, feeding difficulties, microcephaly, facial dysmorphism, and various other congenital malformations. Of these 19, 14 unrelated subjects carried de novo heterozygous single-nucleotide variants (SNVs) or single-base insertions/deletions, 3 siblings harbored a heterozygous single-base insertion, and 2 subjects had a balanced translocation disrupting ZMIZ1 or involving a regulatory region of ZMIZ1. In total, we identified 13 point mutations that affect key protein regions, including a SUMO acceptor site, a central disordered alanine-rich motif, a proline-rich domain, and a transactivation domain. All identified variants were absent from all available exome and genome databases. In vitro, ZMIZ1 showed impaired coactivation of the androgen receptor. In vivo, overexpression of ZMIZ1 mutant alleles in developing mouse brains using in utero electroporation resulted in abnormal pyramidal neuron morphology, polarization, and positioning, underscoring the importance of ZMIZ1 in neural development and supporting mutations in ZMIZ1 as the cause of a rare neurodevelopmental syndrome.
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- 2019
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14. Selection of Domestic Cell Lines for the Creation of Diagnostic and Preventive Preparations against Enterovirus 71
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V P Grachev, Sanin Av, M F Vorovich, S E Sotskova, O I Konyushko, Kozhevnikova Tn, A L Ivanova, V D Popova, and S V Ozherelkov
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0301 basic medicine ,Muscle Cells ,biology ,Cell substrate ,Epithelial Cells ,General Medicine ,Viral Load ,biology.organism_classification ,Virus Replication ,Virology ,General Biochemistry, Genetics and Molecular Biology ,Cell system ,Cell Line ,Enterovirus A, Human ,03 medical and health sciences ,Titer ,030104 developmental biology ,0302 clinical medicine ,Cell culture ,Chlorocebus aethiops ,Enterovirus 71 ,Animals ,Humans ,Permanent cell line ,030217 neurology & neurosurgery - Abstract
We studied the sensitivity of domestic proprietary human and animal cell lines from the collection of M. P. Chumakov Federal Scientific Center for Research and Development of Immuneand-Biological Products to infection with different enterovirus 71 strains. A cell system based on domestic proprietary permanent cell line 4647 was for the first time used for reproduction of four enterovirus 71 strains (BrCr, 42266, 42934, and 43374). It was shown that strain 4647 is the optimal cell substrate for enterovirus 71 reproduction. The titers of enterovirus 71 for all four strains considerably (by 2 lgTCID50/ml and more) increased during sequential passages in permanent cell line 4647. The prospects of using permanent cell line 4647 for creation of diagnostic and preventive preparations against 71 was demonstrated.
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- 2018
15. Ciliogenesis and cell cycle alterations contribute to KIF2A-related malformations of cortical development
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Peggy Tilly, Carla Gomes Da Silva, Yoann Saillour, Maria-Victoria Hinckelmann, Hélène Jagline, Jamel Chelly, Giuseppe Muraca, Alexandre Benmerah, Johan G. Gilet, Nadia Bahi-Buisson, Nicolas Lebrun, Ekaterina L. Ivanova, Nathalie Drouot, Madeline Louise Reilly, Laure Asselin, Fiona Francis, Laurent Nguyen, Loic Broix, Juliette D. Godin, Richard Belvindrah, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA), GIGA-Neurosciences [Université Liège], GIGA [Université Liège], Université de Liège-Université de Liège, Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut Cochin (IC UM3 (UMR 8104 / U1016)), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Cité (UPCité), Université de Liège, Imagine - Institut des maladies génétiques (IHU) (Imagine - U1163), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité), Institut du Fer à Moulin (IFM - Inserm U1270 - SU), Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU), Nouvel Hôpital Civil de Strasbourg, Les Hôpitaux Universitaires de Strasbourg (HUS), and Francis, Fiona
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0301 basic medicine ,Microcephaly ,Neurogenesis ,[SDV]Life Sciences [q-bio] ,[SDV.NEU.NB]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/Neurobiology ,Kinesins ,Spindle Apparatus ,Biology ,Microtubules ,Interneuron migration ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Tubulin ,Ciliogenesis ,Genetics ,medicine ,Animals ,Humans ,Cilia ,Microtubule end ,Progenitor cell ,Molecular Biology ,Genetics (clinical) ,ComputingMilieux_MISCELLANEOUS ,Pachygyria ,Cell Cycle ,Brain ,General Medicine ,Cell cycle ,medicine.disease ,Cell biology ,Malformations of Cortical Development ,Repressor Proteins ,[SDV] Life Sciences [q-bio] ,030104 developmental biology ,[SDV.GEN.GH]Life Sciences [q-bio]/Genetics/Human genetics ,030217 neurology & neurosurgery ,HeLa Cells - Abstract
International audience; Genetic findings reported by our group and others showed that de novo missense variants in the KIF2A gene underlie malformations of brain development called pachygyria and microcephaly. Though KIF2A is known as member of the Kinesin-13 family involved in the regulation of microtubule end dynamics through its ATP dependent MT-depolymerase activity, how KIF2A variants lead to brain malformations is still largely unknown. Using cellular and in utero electroporation approaches, we show here that KIF2A disease-causing variants disrupts projection neuron positioning and interneuron migration, as well as progenitors proliferation. Interestingly, further dissection of this latter process revealed that ciliogenesis regulation is also altered during progenitors cell cycle. Altogether, our data suggest that deregulation of the coupling between ciliogenesis and cell cycle might contribute to the pathogenesis of KIF2A-related brain malformations. They also raise the issue whether ciliogenesis defects are a hallmark of other brain malformations, such as those related to tubulins and MT-motor proteins variants.
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- 2018
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16. Mutations in the HECT domain of NEDD4L lead to AKT-mTOR pathway deregulation and cause periventricular nodular heterotopia
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Broix, L, Jagline, H, L Ivanova, E, Schmucker, S, Drouot, N, Clayton-Smith, J, Pagnamenta, A, Metcalfe, K, Isidor, B, Louvier, U, Poduri, A, Taylor, J, Tilly, P, Poirier, K, Saillour, Y, Lebrun, N, Stemmelen, T, Rudolf, G, Muraca, G, Saintpierre, B, Elmorjani, A, study, Deciphering Developmental Disorders, Moïse, M, Weirauch, N, Guerrini, R, Boland, A, Olaso, R, Masson, C, Tripathy, R, Keays, D, Beldjord, C, Nguyen, L, Godin, J, Kini, U, Nischké, P, Deleuze, J, Bahi-Buisson, N, Sumara, I, Hinckelmann, M, Chelly, J, Institut Cochin (IC UM3 (UMR 8104 / U1016)), Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Regional Genetic Service, St Mary's Hospital, Manchester, The Wellcome Trust Centre for Human Genetics [Oxford], University of Oxford [Oxford], Central Manchester University Hospitals NHS Foundation Trust, Service de génétique médicale - Unité de génétique clinique [Nantes], Université de Nantes (UN)-Centre hospitalier universitaire de Nantes (CHU Nantes), Institut de génétique et biologie moléculaire et cellulaire (IGBMC), Université Louis Pasteur - Strasbourg I-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Institut du Cerveau et de la Moëlle Epinière = Brain and Spine Institute (ICM), Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-CHU Pitié-Salpêtrière [APHP], Pediatric Neurology & Neurogenetics Unit and Laboratories, Children's Hospital A. Meyer-University of Florence (UNIFI), Centre National de Génotypage (CNG), Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Plate Forme Paris Descartes de Bioinformatique (BIP-D), Université Paris Descartes - Paris 5 (UPD5), Institut Cochin (UMR_S567 / UMR 8104), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5), Department of Clinical Genetics [Churchill Hospital], Churchill Hospital Oxford Centre for Haematology, Service de neurologie pédiatrique [CHU Necker], CHU Necker - Enfants Malades [AP-HP]-Assistance publique - Hôpitaux de Paris (AP-HP) (APHP), Institute of Biochemistry (IBC), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology in Zürich [Zürich] (ETH Zürich), Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Université de Strasbourg (UNISTRA), Centre National de la Recherche Scientifique (CNRS)-Université Paris Descartes - Paris 5 (UPD5)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-CHU Pitié-Salpêtrière [AP-HP], Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Università degli Studi di Firenze = University of Florence [Firenze] (UNIFI)-Children's Hospital A. Meyer, Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-CHU Necker - Enfants Malades [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), University of Oxford, Université Pierre et Marie Curie - Paris 6 (UPMC)-Institut National de la Santé et de la Recherche Médicale (INSERM)-CHU Pitié-Salpêtrière [AP-HP], Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Assistance publique - Hôpitaux de Paris (AP-HP) (AP-HP)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), and Università degli Studi di Firenze = University of Florence (UniFI)-Children's Hospital A. Meyer
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0301 basic medicine ,HECT domain ,Male ,Nedd4 Ubiquitin Protein Ligases ,Ubiquitin-Protein Ligases ,[SDV]Life Sciences [q-bio] ,Mutation, Missense ,mTORC1 ,Bioinformatics ,medicine.disease_cause ,Article ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Ubiquitin ,Periventricular Nodular Heterotopia ,Protein Domains ,hemic and lymphatic diseases ,Genetics ,medicine ,Animals ,Humans ,Protein kinase B ,PI3K/AKT/mTOR pathway ,Cells, Cultured ,ComputingMilieux_MISCELLANEOUS ,Mutation ,biology ,Endosomal Sorting Complexes Required for Transport ,TOR Serine-Threonine Kinases ,DAB1 ,Cell biology ,Ubiquitin ligase ,030104 developmental biology ,biology.protein ,Female ,Proto-Oncogene Proteins c-akt ,030217 neurology & neurosurgery ,Signal Transduction - Abstract
Neurodevelopmental disorders with periventricular nodular heterotopia (PNH) are etiologically heterogeneous, and their genetic causes remain in many cases unknown. Here we show that missense mutations in the HECT domain of the E3 ubiquitin ligase NEDD4L lead to PNH associated with toes syndactyly, cleft palate and neurodevelopmental delay. Cellular and expression data showed a sensitivity of PNH-associated mutants to proteasome degradation. Moreover, in utero electroporation approach showed that PNH-related mutants and excess of wild type (WT) NEDD4L affect neurogenesis, neuronal positioning and terminal translocation. Further investigations, including rapamycin based experiments, revealed differential deregulation of pathways involved. Excess of WT NEDD4L leads to a disruption of Dab1 and mTORC1 pathways, while PNH-related mutations are associated with a deregulation of mTORC1 and AKT activities. Altogether, these data provide insights to better understand the critical role of NEDD4L in the regulation of mTOR pathways and their contributions in cortical development.
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- 2017
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17. ANTI-ASIALO GM1 TREATMENT DURING SECONDARY TOXOPLASMA GONDII INFECTION IS LETHAL AND DEPLETES T CELLS
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Daria L. Ivanova, Jason P. Gigley, and Steve L. Denton
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0303 health sciences ,biology ,Effector ,Chemistry ,Secondary infection ,T cell ,Cell ,Immunology ,Toxoplasma gondii ,biology.organism_classification ,Molecular biology ,3. Good health ,Granzyme B ,03 medical and health sciences ,0302 clinical medicine ,medicine.anatomical_structure ,medicine ,biology.protein ,Immunology and Allergy ,Antibody ,CD8 ,030304 developmental biology ,030215 immunology - Abstract
Anti-NK1.1 and anti-Asialo GM1 (ASGM1) antibodies are used to deplete NK cells. Many antibody depletion strategies in vivo can have off-target effects. In a vaccine challenge model of T. gondii infection, we observed treatment of mice with these antibodies resulted in different survival outcomes after lethal secondary infection. Anti-ASGM1 resulted in 100% death and greater parasite burden at the site of infection than anti-NK1.1 treatment. We also found that anti-ASGM1 treatment depleted T cells. While both CD8+ and CD4+ T cells were affected, CD8+ T cells were more susceptible to the anti-ASGM1 treatment. Surface ASGM1 of the T cells was expressed on a higher percentage of CD8+ T cells than CD4+ T cells. Not all CD8+ T cells expressed ASGM1. In immunized mice ASGM1 was highly enriched on the surface of effector memory (Tem) and central memory (Tcm) CD8+ T cells, with a greater effect on Tem cells. After secondary parasite challenge, Tem, Tcm, effector (Tef) and naïve (Tn) CD8+ T cells were positive for ASGM1. Anti-ASGM1 treatment during rechallenge resulted in greater depletion of activated IFNγ+, Granzyme B+, Tem and Tef than Tcm and Tn CD8+ T cells. In addition, anti-ASGM1 depleted IFNγ+ CD4+ T cells. Recombinant IFNγ supplementation prolonged the survival of anti-ASGM1 treated mice, demonstrating that anti-ASGM1 eliminated IFNγ-producing T and NK cells important for control of the parasite. Our results thus highlight that anti-ASGM1 is not an optimal choice for targeting only NK cells and more precise approaches should be used to target them. This study also uncovers ASGM1 as a marker of activated effector T cells and the potential importance of changes in sialylation in lipid rafts for T cell activation during T. gondii infection.
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- 2019
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18. NK Cells in Mucosal Defense against Infection
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David C. Stephenson, Jason P. Gigley, Kaitlyn Weitzman, Jennyfer Ryfe, Ryan Krempels, and Daria L. Ivanova
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Lymphokine-activated killer cell ,General Immunology and Microbiology ,lcsh:R ,lcsh:Medicine ,Review Article ,General Medicine ,Biology ,Communicable Diseases ,General Biochemistry, Genetics and Molecular Biology ,Mucosal Infection ,Killer Cells, Natural ,Phenotype ,medicine.anatomical_structure ,Immune system ,Mucosal immunology ,Cell Movement ,Immunity ,Immunology ,medicine ,Interleukin 12 ,Animals ,Humans ,Bone marrow ,Immunity, Mucosal ,Homing (hematopoietic) - Abstract
Conventional natural killer cells (NK cells) provide continual surveillance for cancer and rapid responses to infection. They develop in the bone marrow, emerge as either NK precursor cells, immature, or mature cells, and disperse throughout the body. In the periphery NK cells provide critical defense against pathogens and cancer and are noted to develop features of adaptive immune responses. In the tightly regulated and dynamic mucosal tissues, they set up residency via unknown mechanisms and from sources that are yet to be defined. Once resident, they appear to have the ability to functionally mature dependent on the mucosal tissue microenvironment. Mucosal NK cells play a pivotal role in early protection through their cytolytic function and IFNγproduction against bacteria, fungi, viruses, and parasitic infections. This review presents what is known about NK cell development and phenotypes of mucosal tissue resident conventional NK cells. The question of how they come to reside in their tissues and published data on their function against pathogens during mucosal infection are discussed. Dissecting major questions highlighted in this review will be important to the further understanding of NK cell homing and functional diversity and improve rational design of NK cell based therapies against mucosal infection.
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- 2014
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19. Immunocytochemical visualization of P185HER2 receptor using antibodies fused with dibarnase and conjugate of barstar with colloidal gold
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Vladimir I. Popenko, Yu. L. Ivanova, Sergey M. Deyev, Taras Balandin, Olga G. Leonova, and E. F. Edelweiss
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Barnase ,biology ,Chemistry ,Endosome ,Biophysics ,Molecular biology ,law.invention ,Cell membrane ,medicine.anatomical_structure ,Structural Biology ,Cell culture ,Confocal microscopy ,law ,Cancer cell ,biology.protein ,medicine ,Fluorescence microscope ,Barstar - Abstract
The localization of the P185HER2 transmembrane receptor in SKOV-3 and BT-474 cancer cells was studied by fluorescence, confocal, and electron immunomicroscopy. The P185HER2 receptor is a marker of breast and ovarian tumors; it is also considered to be a target for anticancer therapy. It is extremely important to choose a universal immunicytotoxic agent applicable, firstly, to study the distribution of P185HER2 in cancer cells, secondarily, to remove P185HER2 from the cell surface and, thirdly, to eliminate target cells. In this study, for visualization P185HER2 we propose an immunocytotoxic system, which consists of monoclonal miniantibody 4D5 scFv to the extracellular P185HER2 domain fused with two molecules of barnase (cytotoxic RNAase from Bacillus amyloliquefaciens) and its specific inhibitor, barstar. Fluorescent microscopy showed that the module 4D5 scFc-dibarnase:barstar is efficient for identifying P185HER2 on the surfaces of cancer cells. It was found by confocal microscopy that interaction with 4D5 scFc-dibarnase results in the internalization of P185HER2. The localization of P185HER2 in human ovarian carcinoma cells (SKOV-3) and breast carcinoma cells (BT-474) was compared by electron microscopy using 4D5 scFv-dibarnase:barstar-Au and 4D5 scFv-dibarnase-Au complexes. P185HER2 is distributed unequally on the cell surface with preferential localization on protrusions or close to their bases and at contacts between protrusions and the cell membrane. At 37°C, P185HER2 is internalized through coated pits and vesicles and concentrates in endosomes and multivesicular bodies in the cells of both cell lines, as well as in lysosomes in BT-474 cells.
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- 2013
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20. Homozygous truncating variants in TBC1D23 cause pontocerebellar hypoplasia and alter cortical development
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H.H. Ropers, Hélène Dollfus, Arjan P.M. de Brouwer, Frédéric Tran Mau-Them, Patrick Nitchké, Karen Runge, Jamel Chelly, Sheikh Riazuddin, Hans van Bokhoven, Saima Riazuddin, Hossein Najmabadi, Elise Schaefer, Attia Razzaq, Kimia Kahrizi, Zafar Iqbal, Jean-François Deleuze, Bénédicte Gérard, Anne de Saint Martin, Marie Aude Spitz, Ekaterina L. Ivanova, Mary Laura, Maria Victoria Hinckelmann, Nathalie Drouot, Muhammad Zaman Khan Assir, Vincent Laugel, Institut de Génétique et de Biologie Moléculaire et Cellulaire (IGBMC), Université de Strasbourg (UNISTRA)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), Les Hôpitaux Universitaires de Strasbourg (HUS), University of Maryland [Baltimore], University of Social Welfare and Rehabilitation Sciences [Tehran], CHU Strasbourg, Fédération de Médecine Translationnelle de Strasbourg (FMTS), Université de Strasbourg (UNISTRA), Radboud University Medical Center [Nijmegen], Centre National de Génotypage (CNG), Commissariat à l'énergie atomique et aux énergies alternatives (CEA), Imagine - Institut des maladies génétiques (IHU) (Imagine - U1163), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPC), Max Planck Institute for Molecular Genetics (MPIMG), Max-Planck-Gesellschaft, and Institut National de la Santé et de la Recherche Médicale (INSERM)-Université Paris Cité (UPCité)
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0301 basic medicine ,Male ,Microcephaly ,Cerebellum ,GTPase-activating protein ,Developmental Disabilities ,medicine.disease_cause ,Mice ,Neuroblastoma ,0302 clinical medicine ,small normally proportioned cerebellum ,microcephaly ,Child ,Genetics (clinical) ,Cells, Cultured ,Genetics ,Neurons ,Mutation ,TBC1D23 ,GTPase-Activating Proteins ,Homozygote ,Hypoplasia ,Pedigree ,medicine.anatomical_structure ,Child, Preschool ,Female ,Protein family ,Adolescent ,Neuronal Outgrowth ,Pontocerebellar hypoplasia ,Biology ,Nervous System Malformations ,Article ,03 medical and health sciences ,Cerebellar Diseases ,Intellectual Disability ,medicine ,Animals ,Humans ,[SDV.GEN]Life Sciences [q-bio]/Genetics ,Neurodevelopmental disorders Donders Center for Medical Neuroscience [Radboudumc 7] ,pontocerebellar hypoplasia ,medicine.disease ,Embryo, Mammalian ,030104 developmental biology ,Rab ,030217 neurology & neurosurgery - Abstract
Pontocerebellar hypoplasia (PCH) is a heterogeneous group of rare recessive disorders with prenatal onset, characterized by hypoplasia of pons and cerebellum. Mutations in a small number of genes have been reported to cause PCH, and the vast majority of PCH cases are explained by mutations in TSEN54, which encodes a subunit of the tRNA splicing endonuclease complex. Here we report three families with homozygous truncating mutations in TBC1D23 who display moderate to severe intellectual disability and microcephaly. MRI data from available affected subjects revealed PCH, small normally proportioned cerebellum, and corpus callosum anomalies. Furthermore, through in utero electroporation, we show that downregulation of TBC1D23 affects cortical neuron positioning. TBC1D23 is a member of the Tre2-Bub2-Cdc16 (TBC) domain-containing RAB-specific GTPase-activating proteins (TBC/RABGAPs). Members of this protein family negatively regulate RAB proteins and modulate the signaling between RABs and other small GTPases, some of which have a crucial role in the trafficking of intracellular vesicles and are involved in neurological disorders. Here, we demonstrate that dense core vesicles and lysosomal trafficking dynamics are affected in fibroblasts harboring TBC1D23 mutation. We propose that mutations in TBC1D23 are responsible for a form of PCH with small, normally proportioned cerebellum and should be screened in individuals with syndromic pontocereballar hypoplasia.
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- 2017
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21. Study of Sedative Tea Phytocomplex within the Framework of Studies Aimed at Creation of a Rectal Dosage Form with Antihistaminic Effect
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V. F. Kulikovskii, D. I. Pisarev, L. L. Ivanova, Elena T. Zhilyakova, N. V. Prokushchenko, and O. O. Novikov
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0301 basic medicine ,Humulus lupulus ,medicine.drug_class ,Rutin ,Xanthones ,Phytochemicals ,Pharmacology ,Loratadine ,Depsides ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Caffeic Acids ,medicine ,Caffeic acid ,Humans ,Apigenin ,Medicinal plants ,Humulus ,Chromatography, High Pressure Liquid ,Flavonoids ,Propiophenones ,Traditional medicine ,biology ,Isoxanthohumol ,Ethanol ,business.industry ,Plant Extracts ,Rosmarinic acid ,Suppositories ,food and beverages ,Mentha piperita ,General Medicine ,biology.organism_classification ,030104 developmental biology ,chemistry ,Cinnamates ,Sedative ,Xanthohumol ,Histamine H1 Antagonists ,Solvents ,business ,030217 neurology & neurosurgery ,medicine.drug - Abstract
We designed a new complex drug with antiallergic effect containing, in addition to the main component loratadine, a phytocomplex for an extra therapeutic effect. A collection of plants with sedative activity is chosen and the optimal agent for extraction of bioactive compounds (40% ethanol) and optimal degree of plant fragmentation are determined. Chemical composition of the sedative tea is evaluated by reverse phase HPLC. The marker components of the species are detected: xanthohumol and isoxanthohumol - Humulus lupulus cone components, Mentha piperita rosmarinic acid, and scutellareine, Menyanthes trifolia element - quercetin-3-rutinoside, and caffeic acid. Standardization of the species by the absolute graduation method in conversion to quercetin-3-rutinoside is suggested.
- Published
- 2016
22. Comparative Analysis of Conventional Natural Killer Cell Responses to Acute Infection with Toxoplasma gondii Strains of Different Virulence
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Daria L. Ivanova, Rida Fatima, and Jason P. Gigley
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0301 basic medicine ,lcsh:Immunologic diseases. Allergy ,Receptor expression ,Population ,Immunology ,Toxoplasma gondii ,Biology ,Natural killer cell ,Microbiology ,03 medical and health sciences ,Immunity ,parasitic diseases ,medicine ,Immunology and Allergy ,Cytotoxic T cell ,education ,education.field_of_study ,natural killer cells ,Innate lymphoid cell ,biology.organism_classification ,NKG2D ,cytokines ,virulence ,030104 developmental biology ,medicine.anatomical_structure ,lcsh:RC581-607 ,toxoplasmosis - Abstract
Conventional natural killer (cNK) cells, members of group 1 innate lymphoid cells, are a diverse cell subpopulation based on surface receptor expression, maturation, and functional potential. cNK cells are critical for early immunity to Toxoplasma gondii via IFNγ production. Acute cNK cell responses to infection with different strains of T. gondii have not yet been characterized in detail. Here, we comprehensively performed this analysis with Type I virulent RH, Type II avirulent ME49, and fully attenuated Type I cps1-1 strains. In response to these three parasite strains, murine cNK cells produce IFNγ and become cytotoxic and polyfunctional (IFNγ+CD107a+) at the site of infection. In contrast to virulent RH and avirulent ME49 T. gondii strains, attenuated cps1-1 induced only local cNK cell responses. Infections with RH and ME49 parasites significantly decreased cNK cell frequency and numbers in spleen 5 days post infection compared with cps1-1 parasites. cNK cell subsets expressing activating receptors Ly49H, Ly49D, and NKG2D and inhibitory receptors Ly49I and CD94/NKG2A were similar when compared between the strains and at 5 days post infection. cNK cells were not proliferating (Ki67−) 5 days post infection with any of the strains. cNK cell maturation as measured by CD27, CD11b, and KLRG1 was affected after infection with different parasite strains. RH and ME49 infection significantly reduced mature cNK cell frequency and increased immature cNK cell populations compared with cps1-1 infection. Interestingly, KLRG1 was highly expressed on immature cNK cells after RH infection. After RH and ME49 infections, CD69+ cNK cells in spleen were present at higher frequency than after cps1-1 infection, which may correlate with loss of the mature cNK cell population. Cytokine multiplex analysis indicated cNK cell responses correlated with peritoneal exudate cell, spleen, and serum proinflammatory cytokine levels, including IL-12. qPCR analysis of parasite-specific B1 gene revealed that parasite burdens may affect cNK cell responses. This study demonstrates infection with RH and ME49 parasites impacts cNK cell maturation during acute T. gondii infection. Different cNK cell responses could impact early immunity and susceptibility to these strains.
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- 2016
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23. Mechanisms involved in alternariol-induced cell cycle arrest
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Andrew Collins, L. Ivanova, James J. Pestka, Gunnar Sundstøl Eriksen, Jørn A. Holme, Laura L. Vines, Anita Solhaug, and B. Spilsberg
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Programmed cell death ,Cell cycle checkpoint ,DNA damage ,Health, Toxicology and Mutagenesis ,Alternariol ,Cyclin B ,Cell Line ,Lactones ,Mice ,chemistry.chemical_compound ,Genetics ,Animals ,Phosphorylation ,Molecular Biology ,Cell Proliferation ,biology ,Cell growth ,Macrophages ,Nuclear Proteins ,Proteins ,Cell Cycle Checkpoints ,Mycotoxins ,Genes, p53 ,Molecular biology ,Proliferating cell nuclear antigen ,Comet assay ,Peroxidases ,chemistry ,biology.protein ,Comet Assay ,Reactive Oxygen Species ,DNA Damage ,Signal Transduction - Abstract
Alternariol (AOH), a mycotoxin produced by Alternaria sp, is often found as a contaminant in fruit and cereal products. Here we employed the murine macrophage cell line RAW 264.7 to test the hypothesis that AOH causes toxicity as a response to DNA damage. AOH at concentrations of 15-30μM almost completely blocked cell proliferation. Within 30min treatment, AOH (30μM) significantly increased the level of reactive oxygen species (ROS). Furthermore, DNA base oxidations as well as DNA strand breaks and/or alkaline labile sites were detected by the comet assay after 2h exposure of AOH. Cell death (mostly necrosis) was observed after prolonged exposure to the highest concentration of AOH (60μM for 24 and 48h) in our study. The DNA damage response involved phosphorylation (activation) of histone H2AX and check point kinase-1- and 2 (Chk-1/2). Moreover, AOH activated p53 and increased the expression of p21, Cyclin B, MDM2, and Sestrin 2; likewise the level of several miRNA was affected. AOH-induced Sestrin 2 expression was regulated by p53 and could at least partly be inhibited by antioxidants, suggesting a role of ROS in the response. Interestingly, the addition of antioxidants did not inhibit cell cycle arrest. Although the formation of ROS by itself was not directly linked cell proliferation, AOH-induced DNA damage and resulting transcriptional changes in p21, MDM2, and Cyclin B likely contribute to the reduced cell proliferation; while Sestrin 2 would contribute to the oxidant defense.
- Published
- 2012
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24. Application of fusion protein 4D5 scFv-dibarnase:barstar–gold complex for studying P185HER2 receptor distribution in human cancer cells
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Vladimir I. Popenko, E. F. Edelweiss, Julia L. Ivanova, Taras Balandin, O. G. Leonova, and Sergey M. Deyev
- Subjects
Bacillus amyloliquefaciens ,Receptor, ErbB-2 ,Endosome ,Recombinant Fusion Proteins ,media_common.quotation_subject ,Coated Vesicles ,Breast Neoplasms ,Endosomes ,Biochemistry ,Ribonucleases ,Bacterial Proteins ,Cell Line, Tumor ,Humans ,Internalization ,media_common ,Ovarian Neoplasms ,Barnase ,Staining and Labeling ,biology ,Chemistry ,Vesicle ,Multivesicular Bodies ,Temperature ,Antibodies, Monoclonal ,Coated Pits, Cell-Membrane ,General Medicine ,biology.organism_classification ,Fusion protein ,Colloidal gold ,biology.protein ,Biophysics ,Female ,Gold ,Barstar - Abstract
Overexpression of the P185(HER2) protein determines the malignancy and unfavorable prognosis of ovarian and breast tumors. In this work, the distribution of P185(HER2) in human cancer cells was studied by electron microscopy, using a novel approach. It is based on the interaction between barnase (a ribonuclease from Bacillus amyloliquefaciens) and its specific inhibitor barstar. The monoclonal antibody 4D5 scFv to extracellular P185(HER2) domain fused with two molecules of barnase was used as a recognizing agent, and the conjugate of colloidal gold with barstar, as an electron dense label for electron microscopic visualization. For labeling, we used supramolecular complexes 4D5 scFv-dibarnase:barstar-Au. The distribution of P185(HER2) in human ovarian carcinoma cells SKOV-3 and breast carcinoma cells BT-474 was studied at 4 °C and 37 °C. It was shown that at 4 °C the protein P185(HER2) occurs exclusively on the cell surface, mainly on protrusions or close to their bases. At 37 °C, the internalization of P185(HER2) caused by its interaction with 4D5 scFv-dibarnase was observed. Inside the cells, P185(HER2) was located in the coated pits and vesicles, endosomes and multivesicular bodies. The data obtained indicate that the supramolecular 4D5 scFv-dibarnase:barstar-gold complex can be used as a new immunodetection system for exploring the P185(HER2) distribution.
- Published
- 2012
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25. Relative position of nucleolar chromatin and nucleolar components in ciliate Didinium nasutum somatic nuclei
- Author
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Vladimir I. Popenko, B. P. Karadzhyan, Yu. F. Ivlev, Olga G. Leonova, and Yu. L. Ivanova
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Ciliate ,Nucleoplasm ,Macronucleus ,biology ,Structural Biology ,Nucleolus ,Biophysics ,Interphase ,Granular component ,Nucleolar chromatin ,biology.organism_classification ,Chromatin ,Cell biology - Abstract
According to our computer modeling data obtained earlier, nucleoli in interphase ciliates Didinium nasutum are complex netlike structures, in which the trabeculumor lamella-shaped fibrillar component is located on the periphery, and the granular component in the central part of the nucleolus. Chromatin bodies connected with nucleoli act as the nucleolar organizers in D. nasutum. In the present work, the arrangement of all chromatin bodies, which could correspond to nucleolar organizers by morphological criteria, is studied by means of a 3D-reconstruction. It is shown that all of these chromatin bodies are localized outside the nucleoli, on the fibrillar component’s periphery. Even those chromatin bodies which appeared to be completely surrounded by the fibrillar nucleolar component on single ultrathin sections are actually settled down in nucleolus cavities open to the nucleoplasm. This proves that the RNA processing in D. nasutum nucleoli is directed toward the center of nucleoli, where the granular component is located. The analysis of the nucleolar chromatin distribution made it possible to conclude that different parts of the complex interfase netlike nucleoli of D. nasutum have approximately the same activity.
- Published
- 2012
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26. Nanocrystalline diamond containing hydrogels and coatings for acceleration of osteogenesis
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Mihail Tarassov, Boris Shivachev, Margarita D. Apostolova, Cyril Popov, Wilhelm Kulisch, L. Ivanova, Iliyan Kolev, Johann Peter Reithmaier, and J. Karadjov
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Materials science ,biology ,Mechanical Engineering ,chemistry.chemical_element ,Nanotechnology ,Osteoblast ,General Chemistry ,Adhesion ,Calcium ,Bone tissue ,Electronic, Optical and Magnetic Materials ,Fibronectin ,medicine.anatomical_structure ,chemistry ,Tissue engineering ,Self-healing hydrogels ,Materials Chemistry ,medicine ,Biophysics ,biology.protein ,Alkaline phosphatase ,Electrical and Electronic Engineering - Abstract
In the present study, we have compared the effects of ultrananocrystalline diamond/amorphous carbon composite films (UNCD/a-C) and nanocrystalline diamond (NCD) containing hydrogels to support the osteogenesis of endothelial progenitor cells (EPCs). The course of EPCs osteogenic differentiation was followed 21 days and assayed by measuring cell-associated alkaline phosphatase activity, calcium deposition, and expression of fibronectin. We found that EPCs were capable to adhere to both surfaces in flattened and elongated morphology. The attachment and spreading on the UNCD/a-C films were faster as compared to the hydrogels containing NCDs (by day 7), and this was connected with the release and adsorption of fibronectin to the surfaces. During the process of EPCs differentiation, the release of fibronectin was favored by hydrogels + NCD (day 21). The formation of calcium nodules, characteristic of osteoblastic mineralization, was detected by Alizarin Red S staining. Differentiation-induced calcium nodules were detected in EPCs growing on both surfaces. The EPCs cultured on hydrogels containing NCD deposited more extracellular calcium in comparison with those on UNCD/a-C films on day 21. These results were consistent with the data about the alkaline phosphatase activity on the same day and verified that an active EPC transformation to osteoblast phenotype occurred on both substrates. Our results could have direct implications in the use of biomaterials in tissue engineering strategies, and this work might be useful for the improvement of the methodologies for substrate preparation (including scaffolds). Thus both surfaces studied could be used for modification of bone implants (bone-anchoring parts of joint prostheses or bone replacements) in order to improve their integration with the surrounding bone tissue, for which improved cell–substrate adhesion is also needed.
- Published
- 2011
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27. FLIGHT MONITORING OF ORIENTAL FRUIT MOTH, CYDIA MOLESTA, AND PEACH TWIG BORER, ANARSIA LINEATELLA, BY PHEROMONE TRAPS IN APRICOT ORCHARD OF NORTH-EAST BULGARIA
- Author
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V. Dzhuvinov, H. Kutinkova, and L. Ivanova
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biology ,business.industry ,Pest control ,Horticulture ,biology.organism_classification ,Pheromone trap ,Prunus armeniaca ,Twig ,Anarsia lineatella ,Orchard ,business ,Fruit tree ,Overwintering - Abstract
In the years 2004-2006, seasonal flight monitoring of oriental fruit moth (OFM), Cydia molesta, and peach twig borer (PTB), Anarsia lineatella was conducted using pheromone traps, in a commercial 3.5-ha orchard, located near Tutrakan in North-East Bulgaria. Pherocon (Trece, USA) traps with sticky changeable bottom and pheromone baits, also products of Trece, were employed. The traps were installed in the middle of April and removed at the end of October, i.e. 2-4 weeks after the last catches. Traps were checked weekly and the caught moths removed after counting. The pheromone baits were replaced every month. In the years of study, the earliest catches of the overwintering OFM generation were recorded at the beginning of May, whereas PTB moths usually appeared in the first ten days of May, few days after OFM. The mass flight of OFM in 2004 was recorded during the third ten days of May, in 2005 at the beginning of June and in 2006 in the second ten days of May. The first peak of PTB flights was noted in the 3 rd ten days of May in all three years of study. A. lineatella developed three generations per year whereas C. molesta four generations. The results of this investigation will be used for perfecting the usage of pheromone traps for these pests, thus improving prognosis of their appearance in North-East Bulgaria. This should be helpful in determining the optimal dates for application of insecticides and signalling them to growers. They may be also useful in predicting the risk of injury to shoots and fruits.
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- 2010
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28. CHONDROSTEREUM PURPUREUM (PERS. EX. FR.) POUZAR-SENSITIVITY OF SOME APRICOT VARIETIES
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L. Ivanova and M. Dimitrova
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Chondrostereum purpureum ,Horticulture ,Agronomy ,biology ,Cultivar ,Plant disease resistance ,biology.organism_classification - Published
- 2009
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29. FIRST OCCURRENCE OF APRICOT BLAST DISEASE CAUSED BY PSЕUDOMONAS SYRINGAE IN THE NORTH-EASTERN PART OF BULGARIA
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L. Ivanova
- Subjects
Horticulture ,Botany ,Pseudomonas syringae ,Biology ,Blast disease - Published
- 2009
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30. Three-dimensional structure of the ciliate Didinium nasutum nucleoli
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Yu. L. Ivanova, Olga G. Leonova, Bella P. Karajan, Vladimir I. Popenko, Sergei Skarlato, and Yu. F. Ivlev
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Ciliate ,Macronucleus ,biology ,Structural Biology ,Nucleolus ,Biophysics ,Didinium nasutum ,Interphase ,Granular component ,Anatomy ,biology.organism_classification ,Cell biology - Abstract
The nucleolar organization in ciliate Didinium nasutum somatic interphase nuclei was studied using serial ultrathin sections and compared for various physiological states of the cell, namely, fed ciliates, starved ciliates, and dormant cysts. It has been shown that the interphase nucleoli are large structures with a complex architecture: the fibrillar component forms an intricate network in the macronucleus space, while the granular component is located inside this network. The structures looking as individual nucleoli in single sections are actually parts of branched nucleolar networks. The intricate nucleolar networks do not disintegrate after a 30-h starvation; however, the granular component becomes denser and develops numerous cavities filled with fine fibrils of a nonribonucleoprotein nature. In fed D. nasutum, the fibrillar structures on the periphery of nucleoli contain numerous pores (virtually absent in starved cell nucleoli), which can potentially serve for transporting newly synthesized rRNP. Branched nucleolar networks are undetectable in cysts. Their nucleoli are individual structures consisting mainly of the fibrogranular component.
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- 2008
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31. Electron microscopic identification of RNA- and DNA-containing structures in the preparations of isolated macronuclei of ciliates Bursaria truncatella
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O Skarlato Sergei, I Popenko Vladimir, P Karajan Bella, G Leonova Olga, and L Ivanova Julia
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Macronucleus ,Immunoelectron microscopy ,RNA ,Biology ,Microbiology ,Chromatin ,Cell biology ,chemistry.chemical_compound ,chemistry ,Bursaria truncatella ,Identification (biology) ,Electron microscopic ,Ecology, Evolution, Behavior and Systematics ,DNA ,CHROMATIN,CILIATES,IMMUNOELECTRON MICROSCOPY,MACRONUCLEUS,RNP-STRUCTURES,SPREAD PREPARATIONS - Abstract
RNAand DNA-containing structures in the ciliate Bursaria truncatella were studied on ultrathin sections and spread preparations of individual macronuclei isolated at middle interphase. To label DNA-containing structures we used anti-DNA antibodies and protein A-colloidal gold complexes. To label RNP structures, complexes of gold with RNase A were used. Chromatin structures in the form of accumulations of nucleosome fibrils, partially decompacted or compact chromatin bodies were effectively labeled with anti-DNA antibodies. The accumulations of nucleosome fibrils were shown to be heterogeneous. Some of them corresponded to partially or completely decompacted inactive chromatin bodies, while others to active chromatin. The latter contained granules of various sizes (20-50 nm) labeled with RNase-gold. The data obtained also showed that homogeneous accumulations of 20-30 nm granules, which often intermingled with accumulations of nucleosome fibrils, corresponded to nucleolar granular component. Such accumulations were in close contact with nucleosome fibrils, which points out the close connection between nucleolar structures and chromatin in macronuclei of B. truncatella.
- Published
- 2016
32. Application of PRV-1 mRNA expression level and JAK2V617F mutation for the differentiating between polycytemia vera and secondary erythrocytosis and assessment of treatment by interferon or hydroxyurea
- Author
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V V Tutaeva, Semenova Ea, M. A. Sokolova, Nina Khoroshko, V. L. Ivanova, T. I. Kolosheinova, A A Levina, J. M. Rozenberg, A. V. Misurin, J. J. Michiels, and T. E. Manakova
- Subjects
Isoantigens ,medicine.medical_specialty ,Mutation, Missense ,Alpha interferon ,Receptors, Cell Surface ,Polycythemia ,GPI-Linked Proteins ,Sensitivity and Specificity ,Gastroenterology ,Diagnosis, Differential ,Polycythemia vera ,Pegylated interferon ,hemic and lymphatic diseases ,Internal medicine ,medicine ,Humans ,Hydroxyurea ,Missense mutation ,RNA, Messenger ,Polycythemia Vera ,Membrane Glycoproteins ,Janus kinase 2 ,biology ,business.industry ,Essential thrombocythemia ,Interferon-alpha ,Hematology ,Janus Kinase 2 ,medicine.disease ,medicine.anatomical_structure ,Primary Myelofibrosis ,Erythropoietin ,Immunology ,biology.protein ,Bone marrow ,business ,medicine.drug - Abstract
Increased PRV-1 mRNA expression and the presence of Jak2(V617F) mutation in peripheral blood granulocytes are specific markers for chronic myeloproliferative disorders (MPD), which facilitate the differential diagnosis between polycythemia vera (PV) and secondary erythrocytosis (SE) and may be helpful for monitoring treatment efficacy in MPD patients. We evaluated the presence of the Jak2V617F mutation and increased PRV-1 mRNA expression along with previously established markers - erythropoietin (EPO) independent colony formation (EEC) and erythropoietin level for diagnosis of PV and assessment of treatment efficiency. Increased PRV-1 expression was found in 37 out of 46 patients diagnosed with PV (80%), in 4 out of 15 patients diagnosed with essential thrombocythemia (ET) (27%) and in 4 out of 8 patients with chronic idiopathic myelofibrosis (CIMF) (50%), and increased PRV-1 expression plus EEC formation was observed in 19 of 36 examined MPD patients indicating the superiority of PVSG and WHO bone marrow criteria for the diagnosis of ET, PV and CIMF. We could confirm a very high sensitivity, specificity and utility of the Jak2(V617F) mutation for differential diagnosis between PV and SE. Spontaneous EEC, serum EPO levels, PRV-1 expression was evaluated in 22 PV patients who carried the Jak2(V617F) mutation. A concordance of increased PRV-1 expression and presence of Jak2(V617F) mutation in 19/22 (85%); of increased PRV-1/Jak2/EEC in 14/22 (63%); and of Jak2/PRV-1/EEC/low Epo level in 10/22 (45%) patients was found indicating the superiority of the presence of Jak2(V617F) mutation for the diagnosis of PV. IFN-alpha therapy in patients with PV was more effective then hydroxyurea treatment and significantly reduced increased PRV-1 expression together with higher levels of Jak2(V617F) mutation (50-100%) in PV patients treated with hydroxy urea (HU) and lower levels of Jak2(V617F) mutation (35-90%) in PV patients treated with IFN-alpha. Normal PRV-1 expression level was observed in 44% of PV patients who achieved clinical remission and only in 3% of patient who did not. These preliminary observations indicate that the Jak2(V617F) mutation in particular and PRV-1 overexpression appear to be suitable markers for monitoring treatment efficiency in prospective randomised clinical studies comparing pegylated interferon and hydroxyurea in well defined PV patients with a clear indication for cytoreductive therapy.
- Published
- 2007
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33. Nucleolar Apparatus in the Macronucleus of Didinium nasutum (Ciliata): EM and 3D Reconstruction
- Author
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Bella P. Karajan, Yuri F. Ivlev, O. G. Leonova, Vladimir I. Popenko, and Julia L. Ivanova
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Macronucleus ,biology ,Ciliata ,Nucleolus ,Anatomy ,Vacuole ,biology.organism_classification ,DNA, Ribosomal ,Microbiology ,Cell biology ,Microscopy, Electron ,Imaging, Three-Dimensional ,Nucleolus Organizer Region ,Animals ,Didinium nasutum ,Granular component ,Ciliophora ,Cell Nucleolus - Abstract
The three-dimensional (3D) organization of nucleoli in the somatic nuclei (macronuclei) of recently fed and starved Didinium nasutum was reconstructed on the basis of serial ultra-thin sections. It was shown that nucleoli, looking on the single sections like individual separate structures, appeared to be parts of the large complicated branchy nucleolar networks. A 30 h starvation did not lead to disintegration of this network, but stimulated formation of numerous vacuoles in the granular component of nucleoli, which becomes more condensed. Unlike starved D. nasutum, in fed ciliates numerous holes appeared in the fibrillar component located at the periphery of nucleoli. These holes may presumably serve as channels for transporting newly synthesized rRNA. To our knowledge, this is the first report of a 3D reconstruction of the nucleolar apparatus in ciliates.
- Published
- 2006
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34. Intracellular Localization of the HCS2 Gene Products in Identified Snail Neurons In Vivo and In Vitro
- Author
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T. A. Korshunova, A. V. Belyavsky, Vladimir I. Popenko, Aleksey Malyshev, D. V. Boguslavsky, V. N. Ierusalimsky, Pavel M. Balaban, Julia L. Ivanova, and O. G. Leonova
- Subjects
Neurons ,biology ,Neurite ,Helix, Snails ,Calcium-Binding Proteins ,Neuropeptides ,Neuropeptide ,Cell Biology ,General Medicine ,Immunogold labelling ,Helix lucorum ,biology.organism_classification ,Immunohistochemistry ,Molecular biology ,Cellular and Molecular Neuroscience ,medicine.anatomical_structure ,Interneurons ,Polyclonal antibodies ,Calcium-binding protein ,medicine ,biology.protein ,Animals ,Neuron ,Peptides ,Intracellular - Abstract
1. The HCS2 (Helix command specific 2) gene expressed in giant command neurons for withdrawal behavior of the terrestrial snail Helix lucorum encodes a unique hybrid precursor protein that contains a Ca-binding (EF-hand motif) protein and four small peptides (CNP1-CNP4) with similar Tyr-Pro-Arg-X aminoacid sequence at the C terminus. Previous studies suggest that under conditions of increased intracellular Ca(2+) concentration the HCS2 peptide precursor may be cleaved, and small physiologically active peptides transported to the release sites. In the present paper, intracellular localization of putative peptide products of the HCS2-encoded precursor was studied immunocytochemically by means of light and electron microscopy. 2. Polyclonal antibodies against the CNP3 neuropeptide and a Ca-binding domain of the precursor protein were used for gold labeling of ultrathin sections of identified isolated neurons maintained in culture for several days, and in same identified neurons freshly isolated from the central nervous system. 3. In freshly isolated neurons, the gold particles were mainly localized over the cytoplasmic secretory granules, with the density of labeling for the CNP3 neuropeptide being two-fold higher than for the calcium-binding domain. In cultured neurons, both antibodies mostly labeled clusters of secretory granules in growth cones and neurites of the neuron. The density of labeling for cultured neurons was the same for both antibodies, and was two-fold higher than for the freshly isolated from the central nervous system neurons. 4. The immunogold particles were practically absent in the bodies of cultured neurons. 5. The data obtained conform to the suggestion that the HCS2 gene products are transported from the cell body to the regions of growth or release sites.
- Published
- 2006
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35. SENSITIVITY OF SOME APRICOT VARIETIES TO THE ATTACK OF GNOMONIA ERYTHROSTOMA
- Author
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L. Ivanova
- Subjects
Horticulture ,Gnomonia ,Sensitivity (control systems) ,Biology ,biology.organism_classification - Published
- 2006
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36. STUDIES ON THE CONTROL OF APRICOT ALTERNARIA BLIGHT (ALTERNARIA TENUISSIMA)
- Author
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L. Ivanova
- Subjects
Horticulture ,biology ,Alternaria tenuissima ,Blight ,Alternaria ,biology.organism_classification - Published
- 2006
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37. Varicella Zoster Virus Infection in Pregnancy
- Author
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L. Ivanova
- Subjects
Pregnancy ,integumentary system ,biology ,business.industry ,viruses ,Congenital Varicella Syndrome ,Varicella zoster virus ,virus diseases ,Varicella-zoster virus infection ,medicine.disease_cause ,medicine.disease ,Virology ,Varicella infection ,medicine ,biology.protein ,Antibody ,business ,Biotechnology - Abstract
Varicella and herpes zoster during pregnancy has been associated with birth defects, neonatal varicella, herpes zoster in newborns and infants. The aim of the present study was to determine the consequences for the neonates, whose mothers were closely exposed to varicella zoster virus (VZV) during pregnancy. Fifty six pregnant women with uncertain histories of prior VZV infection, after a close exposure to varicella, were enrolled for examination of specific anti VZV antibodies. CFT and ELISA were performed. Eleven (20%) pregnancies were complicated with varicella and 4 (7%) with herpes zoster. Intrauterine varicella infection was identified on the basis of clinical evidences (anomalies characteristic for the congenital varicella syndrome, acute varicella at birth or herpes zoster in infancy) by history of delivery. Four infants with neonatal varicella and their mothers were examined serologically. After a close exposure to varicella, seronegative by CFT were 19 (34%) pregnant women and 9 (16%) by...
- Published
- 2006
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38. The Role of Atypical Pathogens in Community—Aguired Pneumonia
- Author
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Angel S. Galabov, K. Yankov, S. Stoyanov, L. Ivanova, and K. Bojkova
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Mycoplasma pneumoniae ,Chlamydia ,Biology ,medicine.disease_cause ,medicine.disease ,biology.organism_classification ,Legionella pneumophila ,respiratory tract diseases ,Microbiology ,Pneumonia ,Older patients ,Clinical diagnosis ,Immunology ,medicine ,Etiology ,Biotechnology ,Mixed infection - Abstract
recent microbiological advances have revealed the importance of atypical pathogens such as Mycoplasma pneumoniae, Chlamydia pneumoniae and Legionella pneumophila as a common cause of community-acquired pneumonia (CAP). These microorganisms in western countries caused a third of CAP and there were many dual infections than ex- pected. In our study 40 inpatients with clinical diagnosis CAP were investigated for de- tection of IgG and IgM specific antibodies to Mycoplasma pneumoniae, Chlamydia pneu- moniae and Legionella pneumophila, by commercial ELISA (EUROIMMUN-GERMANY). The results indicated that 62.5 % from older patients (mean 46,5 years old) had IgG anti- bodies to M. pneumoniae and 37.5 % - to C. pneumoniae. We obtained reliable serologi- cal data, that there was an etiological relationship between diseases and M. pneumoniaе - in 10% of the cases, between diseases and C. pneumoniaе - in 12.5% of cases and bet- ween diseases and L. pneumophila - in 2.5 % of the cases. In one of the cases (2,5%) the data showed mixed infection with M. pneumoniae and C. pneumoniae.
- Published
- 2005
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39. RESULTS OF STUDY ON SOME BIOLOGICAL AND ECONOMICAL TRAITS OF NEW APRICOT SELECTIONS
- Author
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L. Ivanova and A. Lyubenov
- Subjects
Horticulture ,business.industry ,Biology ,business ,Biotechnology - Published
- 2004
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40. Immunocytochemical Study of the Distribution of hcs2 Gene Products in Command Neurons of the Helix lucorum Snail
- Author
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A. V. Belyavsky, V. N. Ierusalimsky, Pavel M. Balaban, O. G. Leonova, Vladimir I. Popenko, D. V. Boguslavsky, and Julia L. Ivanova
- Subjects
biology ,Two-hybrid screening ,Immunocytochemistry ,Biophysics ,Neuropeptide ,Snail ,Helix lucorum ,biology.organism_classification ,Biochemistry ,Structural Biology ,Polyclonal antibodies ,Cytoplasm ,biology.animal ,biology.protein ,Gene - Abstract
The distribution of the putative protein products of gene hcs2 in giant command neurons of the parietal ganglia of the terrestrial snail Helix lucorum has been studied using light- and electron-microscopic immunocytochemistry. The product of the hcs2 gene is a hybrid protein belonging to the EF-hand family of Ca2+-binding proteins and is a precursor of several neuropeptides. Polyclonal antibodies to neuropeptides CNP3 and CNP4 and the C-terminal Ca2+-binding domain of the precursor protein have been used to determine their intracellular localization. The targets for all three types of antibodies have been found in cytoplasmic secretory granules. The label (colloidal gold) density in the secretory granules is two times higher in the case of neuropeptides CNP3 and CNP4 than in the case of the Ca2+-binding domain. Thus, a specific association between the putative products of the hcs2 gene and the cell secretory apparatus has been demonstrated. This agrees with the earlier hypothesis that hcs2 products may serve as neurotransmitters or neuromodulators.
- Published
- 2004
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41. [Untitled]
- Author
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Vladimir I. Popenko, Yu. L. Ivanova, O. G. Leonova, and Yu. F. Ivlev
- Subjects
medicine.anatomical_structure ,Somatic cell ,Biophysics ,medicine ,Bursaria truncatella ,General Chemistry ,General Medicine ,Biology ,Biochemistry ,Nucleus ,Chromatin ,Cell biology - Published
- 2003
- Full Text
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42. [Untitled]
- Author
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N. L. Ivanova
- Subjects
geography ,Larva ,Marsh ,geography.geographical_feature_category ,Ecology ,media_common.quotation_subject ,fungi ,Biology ,Body size ,Fecundity ,Rana ridibunda ,Age composition ,Metamorphosis ,Reproduction ,Ecology, Evolution, Behavior and Systematics ,media_common - Abstract
Environmental conditions in cooling ponds of thermal power plants are favorable for marsh frogs. Their populations inhabiting Verkhne-Tagil and Reftinskoe reservoirs differ in some traits, such as size and age composition, growth rate after metamorphosis, spawning type, fecundity, and characteristics of larval development. Differentiation in body size manifests itself at the early stages of terrestrial life and progresses at later stages. As a consequence, larger individuals may reach maturity and participate in reproduction at an earlier age.
- Published
- 2002
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43. Novel protein haponin regulates cellular response to oxidative stress
- Author
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A. V. Lipkin, D. L. Ivanova, O. V. Bogatova, Irina A. Kostanyan, E. V. Smirnova, E. E. Vorobyeva, Tatiana V. Rakitina, and Valery M. Lipkin
- Subjects
business.industry ,Novel protein ,Biophysics ,Proteins ,CHO Cells ,General Chemistry ,General Medicine ,Biology ,Transfection ,medicine.disease_cause ,Biochemistry ,Recombinant Proteins ,Cell Line ,Cell biology ,Oxidative Stress ,HEK293 Cells ,Text mining ,Cricetinae ,medicine ,Animals ,Humans ,RNA, Small Interfering ,business ,Oxidative stress ,Cell Proliferation - Published
- 2011
- Full Text
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44. EPIPHYTOTIC PROBLEMS OF ALTERNARIA BLIGHT ON APRICOT
- Author
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L. Ivanova
- Subjects
Horticulture ,biology ,Blight ,Alternaria ,biology.organism_classification - Published
- 1999
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45. PRELIMINARY OBSERVATIONS ON APRICOT DECLINE
- Author
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B. Choleva and L. Ivanova
- Subjects
Horticulture ,Biology - Published
- 1999
- Full Text
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46. INVESTIGATIONS ON APRICOT LEAF SCORCH GNOMONIA ERYTHROSTOMA /PERS. EX. FR./ AUERSW BIOECOLOGY AND CONTROL
- Author
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L. Ivanova and S. Karov
- Subjects
Horticulture ,biology ,Gnomonia ,medicine ,Leaf scorch ,biology.organism_classification ,medicine.disease - Published
- 1999
- Full Text
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47. Structures formed by the recombinant derivate of the gypsy retrovirus structural protein gag in bacterial cells
- Author
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O. G. Leonova, Yu. L. Ivanova, B. V. Syomin, Y. V. Ilyin, Vladimir I. Popenko, and N. A. Kazilo
- Subjects
Biophysics ,Structural protein ,Gene Products, gag ,General Chemistry ,General Medicine ,Group-specific antigen ,Biology ,medicine.disease_cause ,biology.organism_classification ,Biochemistry ,Virology ,Molecular biology ,Recombinant Proteins ,law.invention ,Microscopy, Electron ,Retroviridae ,Retrovirus ,law ,Escherichia coli ,medicine ,Recombinant DNA - Published
- 2007
- Full Text
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48. Ultrastructure of the macronucleus in the resting cysts of the ciliate Bursaria truncatella
- Author
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Natalya E. Cherny, Maria G. Yakovleva, Julia L. Ivanova, and Vladimir I. Popenko
- Subjects
Ciliate ,Macronucleus ,Nucleolus ,Anatomy ,Biology ,biology.organism_classification ,Microbiology ,Cell biology ,law.invention ,Chromatin ,Cytoplasm ,law ,Ultrastructure ,Truncatella (fungus) ,Electron microscope - Abstract
Summary The ultrastructure of the macronucleus and the micronucleus in the resting cysts of the ciliate Bursaria truncatella was studied by electron microscopy. The data obtained were compared with those for B. truncatella mature vegetative cells. Macronuclear chromatin in the resting cysts was shown to be organized in compact electron-dense bodies twice to three times as large as those in the vegetative B. truncatella cells completed their growth and differentiation. In the cyst macronucleus we observed clearly separated zones with chromatin bodies of different morphology. Some of these zones contained large, closely associated chromatin bodies, while smaller, more sparsely distributed ones were observed in others. During encystment the chromatin bodies increase in size at first. Then they fuse into rather extended linear or circular chromatin strands of 150 to 300 nm in diameter, resembling chromonemata that are typical for chromosomes of higher eukaryotes. Nucleoli in the early cysts underwent segregation observed mainly in the cortical regions of the macronucleus. The distribution of RNA-containing structures in cysts and the extrusion of nucleolar material into the cytoplasm were studied using RNase A-colloidal gold complexes. The extrusion of nucleolar material appeared to be coupled with the segregation of the nucleoli. The development of chromatin bodies and nucleoli might reflect the functional state of the macronucleus of encysted B. truncatella , indicating that some low transcriptional activity may be left in the cyst macronucleus.
- Published
- 1998
- Full Text
- View/download PDF
49. Quantitative analysis of nucleolar chromatin distribution in the complex convoluted nucleoli of Didinium nasutum (Ciliophora)
- Author
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Julia L Ivanova, Yuri F. Ivlev, O. G. Leonova, Bella P. Karajan, Sergei Skarlato, and Vladimir I. Popenko
- Subjects
Genetics ,Dense fibrillar component ,Macronucleus ,electron microscopy ,Nucleolus ,General Medicine ,macronucleus ,Biology ,Chromatin ,General Biochemistry, Genetics and Molecular Biology ,Cell biology ,lcsh:Biology (General) ,Microscopy, Electron, Scanning ,Nucleolus Organizer Region ,Molecular mechanism ,Didinium nasutum ,ciliates ,Granular component ,Nucleolar chromatin ,3D reconstruction ,Ciliophora ,General Agricultural and Biological Sciences ,nucleoli ,lcsh:QH301-705.5 ,Cell Nucleolus - Abstract
We have earlier shown that the typical Didinium nasutum nucleolus is a complex convoluted branched domain, comprising a dense fibrillar component located at the periphery of the nucleolus and a granular component located in the central part. Here our main interest was to study quantitatively the spatial distribution of nucleolar chromatin structures in these convoluted nucleoli. There are no "classical" fibrillar centers in D.nasutum nucleoli. The spatial distribution of nucleolar chromatin bodies, which play the role of nucleolar organizers in the macronucleus of D.nasutum, was studied using 3D reconstructions based on serial ultrathin sections. The relative number of nucleolar chromatin bodies was determined in macronuclei of recently fed, starved D.nasutum cells and in resting cysts. This parameter is shown to correlate with the activity of the nucleolus. However, the relative number of nucleolar chromatin bodies in different regions of the same convoluted nucleolus is approximately the same. This finding suggests equal activity in different parts of the nucleolar domain and indicates the existence of some molecular mechanism enabling it to synchronize this activity in D. nasutum nucleoli. Our data show that D. nasutum nucleoli display bipartite structure. All nucleolar chromatin bodies are shown to be located outside of nucleoli, at the periphery of the fibrillar component.
- Published
- 2013
50. STUDIES ON THE BIOLOGY AND THE ECOLOGICAL PECULIARITIES OF ANARSIA LINEATELLA ZELL IN THE REGION OF SILISTRA
- Author
-
L. Ivanova
- Subjects
biology ,Ecology ,Anarsia lineatella ,Zoology ,Horticulture ,biology.organism_classification - Published
- 1995
- Full Text
- View/download PDF
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