1. Identification of an activation site in Bak and mitochondrial Bax triggered by antibodies
- Author
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David C.S. Huang, Amber E. Alsop, Wai Shan Yuen, Grant Dewson, Khatira Anwari, Ruth M. Kluck, Nicholas A. Smith, John L. Carroll, Brian J. Smith, and Sweta Iyer
- Subjects
0301 basic medicine ,Protein Conformation, alpha-Helical ,Science ,General Physics and Astronomy ,Apoptosis ,Plasma protein binding ,Mitochondrion ,Molecular Dynamics Simulation ,Mitochondrial apoptosis-induced channel ,General Biochemistry, Genetics and Molecular Biology ,Epitope ,Article ,03 medical and health sciences ,Epitopes ,Gene Knockout Techniques ,Mice ,Bcl-2-associated X protein ,Protein structure ,Cytosol ,Animals ,Humans ,Cells, Cultured ,bcl-2-Associated X Protein ,Uncategorized ,Multidisciplinary ,biology ,Antibodies, Monoclonal ,Cytochromes c ,General Chemistry ,Fibroblasts ,3. Good health ,Cell biology ,Mitochondria ,Mice, Inbred C57BL ,Molecular Docking Simulation ,030104 developmental biology ,Epitope mapping ,bcl-2 Homologous Antagonist-Killer Protein ,biology.protein ,Mutagenesis, Site-Directed ,Oocytes ,Female ,Protein Multimerization ,biological phenomena, cell phenomena, and immunity ,Bcl-2 Homologous Antagonist-Killer Protein ,Epitope Mapping ,Protein Binding - Abstract
During apoptosis, Bak and Bax are activated by BH3-only proteins binding to the α2–α5 hydrophobic groove; Bax is also activated via a rear pocket. Here we report that antibodies can directly activate Bak and mitochondrial Bax by binding to the α1–α2 loop. A monoclonal antibody (clone 7D10) binds close to α1 in non-activated Bak to induce conformational change, oligomerization, and cytochrome c release. Anti-FLAG antibodies also activate Bak containing a FLAG epitope close to α1. An antibody (clone 3C10) to the Bax α1–α2 loop activates mitochondrial Bax, but blocks translocation of cytosolic Bax. Tethers within Bak show that 7D10 binding directly extricates α1; a structural model of the 7D10 Fab bound to Bak reveals the formation of a cavity under α1. Our identification of the α1–α2 loop as an activation site in Bak paves the way to develop intrabodies or small molecules that directly and selectively regulate these proteins., During apoptosis, Bak and Bax are activated by BH3-only proteins binding to a specific hydrophobic groove. Here, the authors show that antibodies can also activate Bak and mitochondrial Bax by binding to the α1-α2 loop, thus identifying a potential clinical target.
- Published
- 2023
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