1. Microbiome dataset from the upper respiratory tract of patients living with HIV, HIV/TB and TB from Myanmar
- Author
-
Bruce Russell, Peter J. Lockhart, Tin Maung Hlaing, Aye Aye Kyaw, Gregory M. Cook, Khine Zaw Oo, Kyaw Soe Htun, Si Thu Aung, Yang Fong, Thein Zaw, and Htin Lin Aung
- Subjects
0301 basic medicine ,Population ,Sequencing data ,Human immunodeficiency virus (HIV) ,Single step ,lcsh:Computer applications to medicine. Medical informatics ,medicine.disease_cause ,03 medical and health sciences ,Biochemistry, Genetics and Molecular Biology ,Medicine ,Microbiome ,lcsh:Science (General) ,education ,education.field_of_study ,Multidisciplinary ,business.industry ,Incidence (epidemiology) ,virus diseases ,Illumina miseq ,Virology ,030104 developmental biology ,medicine.anatomical_structure ,lcsh:R858-859.7 ,business ,lcsh:Q1-390 ,Respiratory tract - Abstract
This article contains microbiome data from the upper respiratory tract of patients living with HIV/TB, HIV and TB from Meiktila, a town in Myanmar where there is a high incidence of HIV and TB. Microbiomes were compared for HIV/TB infected and healthy adults from the same population. We collected nasopharyngeal and oropharyngeal swabs from a total of 33 participants (Healthy {5}, HIV/TB {8}, HIV {14}, and TB {6}). DNA was extracted from the swabs and subjected to custom single step 16s rRNA sequencing on an Illumina MiSeq platform. The sequencing data is available via http://www.ncbi.nlm.nih.gov/bioproject/ PRJNA432583.
- Published
- 2018