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Microbiome dataset from the upper respiratory tract of patients living with HIV, HIV/TB and TB from Myanmar
- Source :
- Data in Brief, Data in Brief, Vol 21, Iss, Pp 354-357 (2018)
- Publication Year :
- 2018
- Publisher :
- Elsevier BV, 2018.
-
Abstract
- This article contains microbiome data from the upper respiratory tract of patients living with HIV/TB, HIV and TB from Meiktila, a town in Myanmar where there is a high incidence of HIV and TB. Microbiomes were compared for HIV/TB infected and healthy adults from the same population. We collected nasopharyngeal and oropharyngeal swabs from a total of 33 participants (Healthy {5}, HIV/TB {8}, HIV {14}, and TB {6}). DNA was extracted from the swabs and subjected to custom single step 16s rRNA sequencing on an Illumina MiSeq platform. The sequencing data is available via http://www.ncbi.nlm.nih.gov/bioproject/ PRJNA432583.
- Subjects :
- 0301 basic medicine
Population
Sequencing data
Human immunodeficiency virus (HIV)
Single step
lcsh:Computer applications to medicine. Medical informatics
medicine.disease_cause
03 medical and health sciences
Biochemistry, Genetics and Molecular Biology
Medicine
Microbiome
lcsh:Science (General)
education
education.field_of_study
Multidisciplinary
business.industry
Incidence (epidemiology)
virus diseases
Illumina miseq
Virology
030104 developmental biology
medicine.anatomical_structure
lcsh:R858-859.7
business
lcsh:Q1-390
Respiratory tract
Subjects
Details
- ISSN :
- 23523409
- Volume :
- 21
- Database :
- OpenAIRE
- Journal :
- Data in Brief
- Accession number :
- edsair.doi.dedup.....924d1ac71e5d1e3a601d2d7f62c8ddd8