1. Effect of decalcification protocols on immunohistochemistry and molecular analyses of bone samples
- Author
-
Louis-Romée Le Nail, Gonzague de Pinieux, Anne Tallet, Corinne Bouvier, Matthias Tallegas, Frédérique Larousserie, Bénédicte Brulin, Marie-Lise Jourdan, Christine Galant, Jessica Massiere, François Le Loarer, Sébastien Aubert, Anne Gomez-Brouchet, Elodie Miquelestorena-Standley, Jean-Marc Guinebretière, and Christine Collin
- Subjects
0301 basic medicine ,Pathology ,medicine.medical_specialty ,Nucleic acid quantitation ,Bone decalcification ,Formic acid ,In situ hybridization ,Gene mutation ,Molecular biology ,Pathology and Forensic Medicine ,03 medical and health sciences ,chemistry.chemical_compound ,030104 developmental biology ,0302 clinical medicine ,chemistry ,030220 oncology & carcinogenesis ,Nucleic acid ,medicine ,Immunohistochemistry ,DNA - Abstract
Diagnosis of osteocartilaginous pathologies depends on morphological examination and immunohistochemical and molecular biology analyses. Decalcification is required before tissue processing, but available protocols often lead to altered proteins and nucleic acids, and thus compromise the diagnosis. The objective of this study was to compare the effect of different methods of decalcification on histomolecular analyses required for diagnosis and to recommend an optimal protocol for processing these samples in routine practice. We prospectively submitted 35 tissue samples to different decalcification procedures with hydrochloric acid, formic acid, and EDTA, in short, overnight and long cycles for 1 to >10 cycles. Preservation of protein integrity was examined by immunohistochemistry, and quality of nucleic acids was estimated after extraction (DNA and RNA concentrations, 260/280 ratios, PCR cycle thresholds), analysis of DNA mutations (high-resolution melting) or amplifications (PCR, in situ hybridization), and detection of fusion transcripts (RT-PCR, in situ hybridization). Hydrochloric acid- and long-term formic acid-based decalcification induced false-negative results on immunohistochemistry and molecular analysis. EDTA and short-term formic acid-based decalcification (
- Published
- 2020
- Full Text
- View/download PDF