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Orthoptera are infected by about 60 species of gregarines assigned to the genus Gregarina Dufour, 1828. Among these species, Gregarina garnhami Canning, 1956 from Schistocerca gregaria (Forsskål, 1775) was considered by Lipa et al. in 1996 to be synonymous with Gregarina acridiorum (Léger 1893), a parasite of several orthopteran species including Locusta migratoria (Linné, 1758). Here, a morphological study and molecular analyses of the SSU rDNA marker demonstrate that specimens of S. gregaria and specimens of L. migratoria are infected by two distinct Gregarina species, G. garnhami and G. acridiorum, respectively. Validation of the species confirms that molecular analyses provide useful taxonomical information. Phenotypic plasticity was clearly observed in the case of G. garnhami: the morphology of its trophozoites, gamonts and syzygies varied according to the geographical location of S. gregaria and the subspecies infected.La taxonomie intégrative confirme que Gregarina garnhami et G. acridiorum (Apicomplexa, Gregarinidae), parasites de Schistocerca gregaria et Locusta migratoria (Insecta, Orthoptera), sont des espèces distinctes.Les orthoptères sont parasités par environ soixante espèces de grégarines affiliées au genre Gregarina Dufour, 1828. Parmi ces espèces Gregarina garnhami Canning, 1956 décrite chez Schistocerca gregaria (Forskål, 1775), a été mise en synonymie par Lipa et al. en 1996 avec Gregarina acridiorum (Léger 1893), parasite de plusieurs espèces d’orthoptères dont Locusta migratoria (Linné, 1758). Ici, une étude morphologique et des analyses moléculaires du marqueur SSU rDNA démontrent que les spécimens de S. gregaria et ceux de L. migratoria sont infectés par 2 espèces distinctes de grégarines, Gregarina garnhami et Gregarina acridiorum, respectivement. La validation de ces espèces confirme l’importance des informations fournies par les analyses moléculaires dans les études taxonomiques. Une plasticité phénotypique a été clairement observée dans le cas de G. garnhami : la morphologie de ses trophozoïtes, gamontes et syzygies varie selon la localisation géographique et la sous-espèce de S. gregaria infectée.

International audience; Under environmental stress, previously hidden additive genetic variation can be unmasked and exposed to selection. The amount of hidden variation is expected to be higher for life history traits, which strongly correlate to individual fitness, than for morphological traits, in which fitness effects are more ambiguous. However, no consensual pattern has been recovered yet, and this idea is still debated in the literature. Here, we hypothesize that the classical categorization of traits (i.e., life history and morphology) may fail to capture their proximity to fitness. In the desert locust, Schistocerca gregaria, a model organism for the study of insect polyphenism, we quantified changes in additive genetic variation elicited by lifetime thermal stress for ten traits, in which evolutionary significance is known. Irrespective of their category, traits under strong stabilizing selection showed genetic invariance with environmental stress, while traits more loosely associated with fitness showed a marked increase in additive genetic variation in the stressful environment. Furthermore, traits involved in adaptive phenotypic plasticity (growth compensation) showed either no change in additive genetic variance or a change of moderate magnitude across thermal environments. We interpret this mitigated response of plastic traits in the context of integrated evolution to adjust the entire phenotype in heterogeneous environments (i.e., adaptiveness of initial plasticity, compromise of phenotypic compensation with stress, and shared developmental pathway). Altogether, our results indicate, in agreement with theoretical expectations, that environmental stress can increase available additive genetic variance in some desert locust traits, but those closely linked to fitness are largely unaffected. Our study also highlights the importance of assessing the proximity to fitness of a trait on a case-by-case basis and in an ecologically relevant context, as well as considering the processes of canalization and plasticity, involved in the control of phenotypic variation.

The theory of evolution predicts that the reproductive success of an organism, i.e. the number of offspring, depends on its phenotypic traits and conspecific interactions. In oviparous species where females provide most of the reproductive costs, larger females are predicted to produce larger clutches. Additionally, when females mate with more than one single male during the breeding season, conspecific interactions are predicted to be centred around females. These two predictions were tested in a female-biased sexual size dimorphic species, the European Pond Turtle Emys orbicularis, where multiple paternity has been reported but whose social interactions are unknown. We investigated individual biometry and conspecific interactions in 23 adults and genetic-inferred paternity of their offspring born between 2012 and 2020 in the conservatory facility of Petite Camargue Alsacienne, Saint-Louis, France. For the 112 collected clutches, multiple paternity occurrence frequency was 38%, with 2 (35%) to 3 (3%) fathers per clutch. Fathers’ body colour has been correlated with single paternity. However, female position in the social network could not predict individual mating (single versus multiple paternity) strategy. When reproduction and potentially population dynamics mainly depend on maternal traits, females have to be highly considered, particularly in species of conservation concern.; La théorie de l'évolution prédit que le succès reproducteur d'un organisme, c'est-à-dire le nombre de descendants, dépend de ses traits phénotypiques et des interactions conspécifiques. Chez les espèces ovipares où les femelles fournissent la plupart des coûts de reproduction, on prévoit que les femelles plus grosses produiront de plus grosses couvées. Aussi, lorsque les femelles s'accouplent avec plus d'un seul mâle pendant la saison de reproduction, les interactions conspécifiques devraient être centrées autour des femelles. Ces deux prédictions ont été testées chez une espèce dimorphique, la Cistude d’Europe Emys orbicularis, où des cas de paternité multiple ont été observés. Nous avons étudié la biométrie individuelle et les interactions conspécifiques chez 23 adultes, ainsi que la paternité (simple ou multiple) au sein de pontes collectées de 2012 et 2020 dans l’élevage conservatoire de la Petite Camargue Alsacienne, à Saint-Louis (France). Parmi les 112 couvées collectées, la paternité multiple concernait 38% des couvées, avec 2 (35%) à 3 (3%) pères par couvée. Les mâles présentant davantage de tâches jaunes sur leur corps sont plus souvent impliqués dans la paternité simple. Cependant, la position de la femelle au sein de la population n’a pas permis de prédire la stratégie de reproduction privilégiée. Puisque la reproduction et potentiellement la dynamique de la population dépendent principalement des traits maternels, les femelles doivent faire l’objet d’une attention particulière, en particulier chez les espèces dont la conservation est préoccupante.

International audience; Phenotypic plasticity: a brief introduction. Phenotypic plasticity describes the ability of a given genotype to produce different phenotypes in response to distinct environmental conditions. It has major implications in agronomy, animal husbandry and medicine and is also thought to facilitate evolution. Phenotypic plasticity is widely observed in the wild. It is only relatively recently that the mechanisms involved in phenotypic plasticity have been analysed. Thanks to laboratory experiments we understand better how environmental conditions are involved in phenotypic variations. This article introduces major concepts from the phenotypic plasticity field, presents briefly mechanisms involved in phenotypic plasticity and discusses the links between phenotypic plasticity and evolution.; La plasticité phénotypique décrit la propriété d'un génotype donné à produire des phénotypes différents en réponse à des conditions environnementales distinctes. Elle est observée fréquemment dans la nature et des expériences en laboratoire permettent de mieux en comprendre les mécanismes. Cet article introduit les concepts principaux du domaine de la plasticité phénotypique, présente brièvement les mécanismes impliqués dans la plasticité phénotypique et discute les liens entre plasticité phénotypique et évolution.

Background The root system plays a major role in plant growth and development and root system architecture is reported to be the main trait related to plant adaptation to drought. However, phenotyping root systems in situ is not suited to high-throughput methods, leading to the development of non-destructive methods for evaluations in more or less controlled root environments. This study used a root phenotyping platform with a panel of 20 japonica rice accessions in order to: (i) assess their genetic diversity for a set of structural and morphological root traits and classify the different types; (ii) analyze the plastic response of their root system to a water deficit at reproductive phase and (iii) explore the ability of the platform for high-throughput phenotyping of root structure and morphology. Results High variability for the studied root traits was found in the reduced set of accessions. Using eight selected traits under irrigated conditions, five root clusters were found that differed in root thickness, branching index and the pattern of fine and thick root distribution along the profile. When water deficit occurred at reproductive phase, some accessions significantly reduced root growth compared to the irrigated treatment, while others stimulated it. It was found that root cluster, as defined under irrigated conditions, could not predict the plastic response of roots under drought. Conclusions This study revealed the possibility of reconstructing the structure of root systems from scanned images. It was thus possible to significantly class root systems according to simple structural traits, opening up the way for using such a platform for medium to high-throughput phenotyping. The study also highlighted the uncoupling between root structures under non-limiting water conditions and their response to drought.

Le criquet pèlerin, Schistocerca gregaria Forskål, 1775, est un ravageur majeur pour l'agriculture. Affiner les connaissances sur sa distribution spatiale est essentiel pour sa gestion préventive. Dans ce but, nous avons utilisé au Tchad une technique de lissage spatial de densités sur 7014 observations du criquet pèlerin (1965-1971 et 1986-2017) afin d'élaborer des cartes saisonnières de répartition pour les périodes d'invasion et de rémission. Trois zones correspondant à des aires de reproduction et foyers de grégarisation ont été identifiées : (1) Kanem/lac Tchad, (2) Batha, (3) Ennedi. La première pourrait être un nouveau foyer de grégarisation. Ces zones se rajoutent à celle du massif du Tibesti, où les signalements sont plus rares que par le passé à cause de l'insécurité. Des prospections plus régulières devraient permettre de confirmer que la distribution du criquet pèlerin a récemment évolué. Mots clés : Schistocerca gregaria / reproduction / prévention des risques / distribution spatiale / plasticité phénotypique Abstract-Mapping of the breeding and gregarization areas of the desert locust in Chad. The desert locust, Schistocerca gregaria Forskål, 1775, is a major threat to agriculture. Refining our knowledge on its spatial distribution is a key point for its preventive management. To do so, we used in Chad a method of spatial smoothing of densities upon 7014 survey points (1965-1971 and 1986-2017) of the desert locust to develop seasonal distribution maps for invasion and remission periods. Three zones corresponding to breeding and gregarization areas have been identified: (1) Kanem/lake Chad, (2) Batha, (3) Ennedi. The first one may be a new gregarization area. These zones add to the Tibesti mountains where locust reports are less frequent than in the past, due to insecurity. More regular surveys should confirm that the distribution of the desert locust has recently changed.

Phenotypic plasticity has been repeatedly suggested to facilitate adaptation to new environmental conditions, as in invasions. Here, we investigate this possibility by focusing on the worldwide invasion of Drosophila suzukii : an invasive species that has rapidly colonized all continents over the last decade. This species is characterized by a highly developed ovipositor, allowing females to lay eggs through the skin of ripe fruits. Using a novel approach based on the combined use of scanning electron microscopy and photogrammetry, we quantified the ovipositor size and three-dimensional shape, contrasting invasive and native populations raised at three different developmental temperatures. We found a small but significant effect of temperature and geographical origin on the ovipositor shape, showing the occurrence of both geographical differentiation and plasticity to temperature. The shape reaction norms are in turn strikingly similar among populations, suggesting very little difference in shape plasticity among invasive and native populations, and therefore rejecting the hypothesis of a particular role for the plasticity of the ovipositor in the invasion success. Overall, the ovipositor shape seems to be a fairly robust trait, indicative of stabilizing selection. The large performance spectrum rather than the flexibility of the ovipositor would thus contribute to the success of D. suzukii worldwide invasion.

Background The ability of a genotype to produce different phenotypes according to its surrounding environment is known as phenotypic plasticity. Within different individuals of the same species, phenotypic plasticity can vary greatly. This contrasting response is caused by gene-by-environment interactions (GxE). Understanding GxE interactions is particularly important in agronomy, since selected breeds and varieties may have divergent phenotypes according to their growing environment. Industrial microbes such as Saccharomyces cerevisiae are also faced with a large range of fermentation conditions that affect their technological properties. Finding the molecular determinism of such variations is a critical task for better understanding the genetic bases of phenotypic plasticity and can also be helpful in order to improve breeding methods. Results In this study we implemented a QTL mapping program using two independent cross (~ 100 progeny) in order to investigate the molecular basis of yeast phenotypic response in a wine fermentation context. Thanks to whole genome sequencing approaches, both crosses were genotyped, providing saturated genetic maps of thousands of markers. Linkage analyses allowed the detection of 78 QTLs including 21 with significant interaction with the environmental conditions. Molecular dissection of a major QTL demonstrated that the sulfite pump Ssu1p has a pleiotropic effect and impacts the phenotypic plasticity of several traits. Conclusions The detection of QTLs and their interactions with environment emphasizes the complexity of yeast industrial traits. The validation of the interaction of SSU1 allelic variants with the nature of the fermented juice increases knowledge about the impact of the sulfite pump during fermentation. All together these results pave the way for exploiting and deciphering the genetic determinism of phenotypic plasticity. Electronic supplementary material The online version of this article (10.1186/s12864-018-5145-4) contains supplementary material, which is available to authorized users.

Adaptive phenotypic plasticity is a key component of the ability of organisms to cope with changing environmental conditions. Fish have been shown to exhibit a substantial level of phenotypic plasticity in response to abiotic and biotic factors. In the present study, we investigate the link between environmental sensitivity assessed globally (revealed by phenotypic variation in body weight) and more targeted physiological and behavioral indicators that are generally used to assess the sensitivity of a fish to environmental stressors. We took advantage of original biological material, the rainbow trout isogenic lines, which allowed the disentangling of the genetic and environmental parts of the phenotypic variance. Ten lines were characterized for the changes of body weight variability (weight measurements taken every month during 18 months), the plasma cortisol response to confinement stress (3 challenges) and a set of selected behavioral indicators. This study unambiguously demonstrated the existence of genetic determinism of environmental sensitivity, with some lines being particularly sensitive to environmental fluctuations and others rather insensitive. Correlations between coefficient of variation (CV) for body weight and behavioral and physiological traits were observed. This confirmed that CV for body weight could be used as an indicator of environmental sensitivity. As the relationship between indicators (CV weight, risk-taking, exploration and cortisol) was shown to be likely depending on the nature and intensity of the stressor, the joint use of several indicators should help to investigate the biological complexity of environmental sensitivity.

La régression aléatoire appliquée à l'étude de la dendroplasticité. Plasticité phénotypique, des concepts à l'analyse de données

Epigenetic marks include Histone Post-Translational Modifications and DNA methylation which are known to participate in the programming of gene expression in plants and animals. These epigenetic marks may be subjected to dynamic changes in response to endogenous and/or external stimuli and can have an impact on phenotypic plasticity. Studying how plant genomes can be epigenetically shaped under stressed conditions has become an essential issue in order to better understand the molecular mechanisms underlying plant stress responses and enabling epigenetic in addition to genetic factors to be considered when breeding crop plants. In this perspective, we discuss the contribution of epigenetic mechanisms to our understanding of plant responses to biotic and abiotic stresses. This regulation of gene expression in response to environment raises important biological questions for perennial species such as grapevine which is asexually propagated and grown worldwide in contrasting terroirs and environmental conditions. However, most species used for epigenomic studies are annual herbaceous plants, and epigenome dynamics has been poorly investigated in perennial woody plants, including grapevine. In this context, we propose grape as an essential model for epigenetic and epigenomic studies in perennial woody plants of agricultural importance.

Tree height-diameter allometry, the link between tree height and trunk diameter, reflects the evolutionary response of a particular species’ allocation patterns to above and belowground resources. As a result, it differs among and within species due to both local adaptation and phenotypic plasticity. These phenotypic variations in tree height-diameter allometry determine tree productivity, resistance and resilience to climate variation and, ultimately, the success of plant material used in restoration projects. We tested the effect of climate change and population origin on the phenotypic variation of tree allometry in four pine species at an early stage of development (ca. 11 years old) based upon data originated from multi-site provenance tests and planted along a wide climatic range in south-western Europe. For a representative sample of populations from each species, we used already-developed species-specific height-diameter allometric models to assess changes in allometry between present and future climatic conditions. We found that Pinus halepensis and Pinus pinaster were the most plastic species, while Pinus sylvestris and Pinus nigra showed negligible plastic responses. In addition, our models stressed that pine tree height-diameter allometry will change and phenotypic variation could increase, except in P. sylvestris, under future environmental conditions. For some of the species, this might allow the selection of phenotypes better suited to novel climatic conditions. These foreseeable changes in tree height-diameter allometry (among and within-species) could entail eco-evolutionary effects on the early forest plantation dynamics. Therefore, restoration and reforestation plans should consider these effects, as they may interfere with production and/or environmental goals. © 2016, Springer Science+Business Media Dordrecht.

Les populations répondent aux variations de l'environnement par une adaptation dans un premier temps plastique puis, à plus long terme, génétique. Cette faculté à évoluer est aujourd'hui confrontée à un changement climatique à la fois très rapide et de grande ampleur. étude de 15 provenances de sapin pectiné (Abies alba Mill.) réparties sur trois gradients altitudinaux (N 900 à 1600 rn) nous a permis d'évaluer par des approches de dendroécologie et de génétique quantitative leurs caractéristiques phénotypiques et génétiques ainsi que leur potentiel d'acclimatation et d'adaptation. La croissance radiale de 129 arbres adultes répartis le long des gradients a été analysée. Six traits adaptatifs liés à la croissance, la phénologie et la survie ont été mesurés sur 57 descendances maternelles issues de ces provenances et installées en transplantations réciproques dans neuf jardins communs répartis sur les gradients. Les résultats montrent que (i) la diversité phénotypique des populations est principalement due à l'environnement (i.e. plasticité phénotypique), (ii) l'ensemble des traits mesurés sur les semis sont sous contrôle génétique, (iii) les populations étudiées ne semblent pas avoir été soumises à des sélections différenciées (iv) le sapin est très sensible à la sécheresse estivale, d'autant plus si elle se répète d'une année sur l'autre. L'ensemble de ces résultats suggère que les populations étudiées présentent de bonnes capacités d'adaptation mais qu'à plus ou moins court terme, le sapin pectiné est menacé d'extinction à basse altitude ou en marge sud de son aire de répartition.

In angiosperms, many studies have described the inter-specific variability of hydraulic-related traits and little is known at the intra-specific level. This information is however mandatory to assess the adaptive capacities of tree populations in the context of increasing drought frequency and severity. Ten 20-year old European beech (Fagus sylvatica L.) provenances representing the entire distribution range throughout Europe and differing significantly in aboveground biomass increment (ABI) by a factor of up to four were investigated for branch wood anatomical, hydraulic, and foliar traits in a provenance trial located in Northern Europe. We quantified to which extend xylem hydraulic and leaf traits are under genetic control and tested whether the xylem hydraulic properties (hydraulic efficiency and safety) trades off with yield and wood anatomical and leaf traits. Our results showed that only three out of 22 investigated ecophysiological traits showed significant genetic differentiations between provenances, namely vessel density (VD), the xylem pressure causing 88% loss of hydraulic conductance and mean leaf size. Depending of the ecophysiological traits measured, genetic differentiation between populations explained 0-14% of total phenotypic variation, while intra-population variability was higher than inter-population variability. Most wood anatomical traits and some foliar traits were additionally related to the climate of provenance origin. The lumen to sapwood area ratio, vessel diameter, theoretical specific conductivity and theoretical leaf-specific conductivity as well as the C:N-ratio increased with climatic aridity at the place of origin while the carbon isotope signature (δ(13)C) decreased. Contrary to our assumption, none of the wood anatomical traits were related to embolism resistance but were strong determinants of hydraulic efficiency. Although ABI was associated with both VD and δ(13)C, both hydraulic efficiency and embolism resistance were unrelated, disproving the assumed trade-off between hydraulic efficiency and safety. European beech seems to compensate increasing water stress with growing size mainly by adjusting vessel number and not vessel diameter. In conclusion, European beech has a high potential capacity to cope with climate change due to the high degree of intra-population genetic variability. Open-Access-Publikationsfonds 2016 peerReviewed

Cette thèse visait à développer nos connaissances quant au contrôle génétique et environnemental et la structuration géographique de la variabilité phénotypique pour des caractères fonctionnels chez le peuplier noir (Populus nigra L.). Trois caractères fonctionnels ont été étudiés : la phénologie de croissance, WUE et la résistance à la cavitation. La variabilité phénotypique exprimée pour la phénologie de croissance et WUE a été évaluée au sein d’une collection européenne de peuplier noir regroupant 1085 génotypes échantillonnés dans 13 métapopulations et installés en test clonal en pépinière dans deux sites expérimentaux. Nos résultats ont révélé une importante variabilité génétique ainsi qu’une importante plasticité phénotypique des caractères phénologiques et de WUE au sein des métapopulations. Une différenciation génétique modérée à forte des métapopulations a été observée pour la phénologie de croissance et WUE. Les différences entre métapopulations se structuraient selon des patrons plus ou moins complexes, qui semblaient refléter, pour la phénologie de croissance, une adaptation locale des métapopulations aux conditions de photopériode et de température. Tenant compte des capacités de phénotypage limitées pour la résistance à la cavitation, la variabilité génétique exprimée pour ce caractère a été évaluée au sein d’une population naturelle de peuplier noir regroupant 33 génotypes et installée en test clonal en pépinière dans un site expérimental. Nous avons détecté une variation significative du niveau de résistance à la cavitation entre génotypes. De manière générale, aucune relation phénotypique significative n’a été détectée entre la phénologie de croissance, WUE et la résistance à la cavitation au niveau intra-population, suggérant le maintien d’une diversité de combinaisons fonctionnelles. Le développement d’une puce à 10 331 marqueurs SNPs distribués à l’échelle du génome de P. nigra, notamment dans des régions candidates pour la phénologie de croissance, devrait permettre, à court terme, de confirmer l’adaptation locale des populations de peuplier noir et d’explorer ses bases génétiques., This work aimed at improving our understanding of the genetic and environmental control as well as the geographic structure of phenotypic variation for functional traits in black poplar (Populus nigra L.). Three functional traits were studied: bud phenology, water-use efficiency (WUE) and xylem resistance to drought-induced cavitation. The phenotypic variation expressed for bud phenology and WUE was evaluated in a European P. nigra collection composed of 1085 cloned individuals sampled in 13 natural metapopulations and established in clonal test in nursery at two experimental sites. Substantial genetic variation and substantial phenotypic plasticity for bud phenology and WUE were observed within all metapopulations. Moderate to strong genetic differentiation of metapopulations was evidenced for phenological traits and WUE. Patterns of genetic differentiation were more or less complex depending on traits and seemed to reflect, for phenological traits, local adaptation of metapopulations to photoperiod and temperature. Taking into account the limited phenotyping capacity for xylem resistance to cavitation, genetic variation expressed for this trait was evaluated within one single natural population of black poplar composed of 33 genotypes which were established in clonal test in nursery at one experimental site. Significant variations were observed between genotypes for the degree of cavitation resistance. Overall, no significant relationship was detected between bud phenology, WUE and cavitation resistance at the within-population level, indicating the maintenance of a diversity of functional combinations. The development of an array covering 10 331 SNPs distributed across the P. nigra genome, notably in candidate regions for bud phenology, will enable in the short-term to confirm local adaptation of P. nigra populations and to identify its genetic basis.

Tradeoffs lead to antagonistic relationships between phenotypic traits and are thought to be determined both genetically and environmentally. We present here an allocation model that distinguishes between the genetic and environmental components of variation in resource allocation. In this model we introduced plasticity of resource allocation which was considered to be an adaptive response to environmental variations. The results show that resource allocation plasticity is a key parameter for the existence of environmental (i.e. inter environments and intra genotype) correlations and is therefore necessary to detect environment-induced tradeoffs. We also investigated the impact of the resource allocation plasticity and other factors on genetic (i.e. inter genotypes) correlations. Our results show that resource allocation plasticity induces a masking effect of tradeoffs when studying genetic correlations and increases the masking effect of resource variation by making apparent correlations positive when negative correlations are expected. In addition, by simulating different sources of resource acquisition variation, we demonstrated that resource variation might have different effects on correlations according to the experimental design and the studied biological material. Further development of this model may be used to investigate the theoretical implications of tradeoffs in evolutionary biology and to improve design and interpretation of experimental studies.

This work aimed (i) at characterizing the impact of planting density and pedoclimatic conditions on the physiology of poplar and willow dedicated to biomass production, (ii) at evaluating the genetic variability of productivity-related traits, water-use efficiency (WUE) and nitrogen-use efficiency (NUE) in a perspective of plant breeding, and (iii) at assessing the relationships among these traits. Four experimental plantations were established in northern France. Water-use efficiency was indirectly estimated at leaf level through bulk leaf carbon isotope discrimination (Δ13C) and NUE was calculated at plant level as the ratio between the aerial biomass and the stem nitrogen content. Our results clearly show that increasing planting density affects biomass production and WUE depending on site characteristics. At the most favorable site for growth, trees grown at higher density displayed taller stems, lower stem circumference, and higher Δ13C, than trees grown at lower density indicating that increased tree density mainly accentuated competition for light. Under less favorable conditions in terms of water availability and fertility, an increase of planting density involved higher WUE and lower stem circumference, likely because of an increased competition for water. Positive relationships between biomass production and WUE were detected for poplar and willow only under environmental conditions where competition for any resources was reduced. A large canopy is inevitably associated to potentially more important transpiration water losses. These higher water losses at plant level could be compensated at leaf level through a better stomatal regulation. The Genotype x Site interactions indicated that it is difficult to identify good genotypes for a large set of pedoclimatic conditions. The selection of genotypes has to be realized depending on the site conditions. Finally, the absence of antagonism between biomass production, WUE, and NUE suggests the possibility to select genotypes for these three traits independently.

National audience

International audience; Phenotypic plasticity is a key mechanism associated with the spread of exotic plants and previous studies have found that invasive species are generally more plastic than co-occurring species. Comparatively, the evolution of phenotypic plasticity in plant invasion has received less attention, and in particular, the genetic basis of plasticity is largely unexamined. Native from North America, Acer negundo L. is aggressively impacting the riparian forests of southern and eastern Europe thanks to higher plasticity relative to co-occurring native species. We therefore tested here whether invasive populations have evolved increased plasticity since introduction. The performance of 1152 seedlings from 8 native and 8 invasive populations was compared in response to nutrient availability. Irrespective of nutrients, invasive populations had higher growth and greater allocation to above-ground biomass relative to their native conspecifics. More importantly, invasive genotypes did not show increased plasticity in any of the 20 traits examined. This result suggests that the high magnitude of plasticity to nutrient variation of invasive seedlings might be pre-adapted in the native range. Invasiveness of A. negundo could be explained by higher mean values of traits due to genetic differentiation rather than by evolution of increased plasticity.

International audience

Understanding of the mechanisms behind the success of the invasive species is essential to manage current biological invasions and to prevent the risks of the futures ones. Using a conceptual framework integrating ecological and evolutionary processes, this work aimed to analyse the factors of the common ragweed colonization in France. First of all, the study of biotic and abiotic interactions has shown the ability of common ragweed to tolerate herbivory and water stress. Common ragweed is able to buffer defoliation through an efficient compensatory growth with no consequence on the reproduction. Herbivory tolerance has been maintained in introduced populations even if herbivory pressure is low in the introduction area. Under water stress conditions, common ragweed displayed higher root biomass than the other species present in the communities it invades. In addition, differences in mean trait values suggest different niche occupation by common ragweed compared with its companion species. Common garden experiments comparing native populations vs. invasive isolated and invasive core populations have shown that adaptation ability is mainly due to phenotypic plasticity rather than trait differentiations. Quantitative genetic studies suggest a high evolutionary potential for germination traits. Morphological, phenological and physiological traits exhibit lower standard genetic variation and lower heritability and thus a lower evolutionary potential. However, variation in reaction norms suggests a high evolutionary potential for phenotypic plasticity. Herbivory and water stress tolerance are factors that potentially increase the ability to colonize à large range of habitats. Furthermore, phenotypic plasticity and evolutionary potential may also favour an increase or a shift in species ecological niche and hence may favour the distribution range expansion, La compréhension des mécanismes déterminant le succès des espèces invasives est une étape essentielle dans la gestion des invasions biologiques actuelles et la prédiction des futurs risques d’invasion. En adoptant un cadre d’étude conceptuel intégrant les processus écologiques et évolutifs, l’objectif de ce travail était d’analyser les déterminants de la colonisation de l’ambroisie à feuilles d’armoise en France. Tout d’abord, l’étude des interactions biotiques et abiotiques a permis de montrer la capacité de tolérance de l’ambroisie à l’herbivorie et au stress hydrique. L’ambroisie est capable de tolérer la défoliation grâce à une croissance compensatoire efficace, sans que sa reproduction en soit affectée. Cette forte tolérance à l’herbivorie est maintenue chez les populations introduites, malgré la faible pression des ennemis naturels dans la zone d’introduction. En condition de stress hydrique, l’ambroisie produit une biomasse racinaire supérieure aux espèces présentes dans les communautés qu’elle envahit. De plus, les différences dans les valeurs moyennes pour les traits mesurés suggèrent une occupation différente par l’ambroisie des niches écologiques disponibles. La comparaison en jardins communs de populations de l’aire d’origine avec des populations de l’aire d’introduction isolées et issues du foyer central d’invasion a montré que l’adaptation de l’ambroisie à son environnement reposait principalement sur la plasticité phénotypique plutôt que sur la différenciation des traits. Les études de génétiques quantitatives ont mis en évidence un potentiel évolutif élevé pour les traits liés à la germination. Les traits liés à la morphologie, à la phénologie et à la physiologie de la plante montrent une variance additive et une héritabilité plus faibles et donc un potentiel évolutif moindre. En revanche, la variation dans les normes de réaction indique un potentiel évolutif important de la plasticité phénotypique. La tolérance au stress hydrique et à l’herbivorie sont des facteurs qui potentiellement augmentent la capacité de l’ambroisie à coloniser une large gamme d’habitat. De plus, la plasticité phénotypique et le potentiel évolutif important peuvent favoriser une augmentation ou un déplacement de la niche écologique de l’espèce et ainsi favoriser l’expansion de son aire de répartition

This work aimed at studying the genetic variability and the phenotypic plasticity of vulnerability to cavitation in beech (Fagus sylvatica L.). We tested the variations due to the methodology of measuring vulnerability to cavitation. Our study showed that the variations in vulnerability to cavitation over time are low. However, it’s better to avoid collecting samples during the period of initial wood formation. Furthermore it’s possible to store samples without degrading measures for during one month. Our results also show that vulnerability to cavitation can be variable both within the same tree and between populations in situ. We determined the proportion of phenotypic plasticity and the proportion of genetic variability in the variability of vulnerability to cavitation. For this we studied 17 beech populations from all Europe and growing in a common garden. Among the 17 populations 6 of them have been studied in three different common gardens (France, Spain and Slovakia). Our results indicate that for beech, vulnerability to cavitation varies considerably within populations. They also indicate that there are few genetic differentiations between populations. The results show that the phenotypic plasticity of vulnerability to cavitation is important among common garden, and the degree of this plasticity can vary between populations. To complete our study, we looked at the relationships between vulnerability to cavitation and hydraulic efficiency parameters and with the water use efficiency. Our results do not reveal evidence of relationships vulnerability to cavitation and other physiological traits., Cette thèse visait à étudier la variabilité génétique et plasticité phénotypique de la vulnérabilité à la cavitation chez le hêtre (Fagus sylvatica L.). A cette fin, nous avons tout d’abord testé les variations dues à la méthodologie de mesure de la vulnérabilité à la cavitation. Notre étude a montré que les variations de vulnérabilité à la cavitation au cours du temps sont faibles. Néanmoins, il est préférable d’éviter de récolter les échantillons durant le début de la période de formation du bois. Par ailleurs il est possible de conserver au frais les échantillons sans dégrader les mesures durant au moins un mois. Nos résultats montrent également que la vulnérabilité à la cavitation peut être variable aussi bien au sein d’un même arbre qu’entre populations in situ. Ensuite, nous avons voulu déterminer la part de plasticité phénotypique de la part de variabilité génétique dans la variabilité de la vulnérabilité à la cavitation. Pour cela nous avons étudié 17 populations de hêtre venant de toute l’Europe et poussant dans une plantation comparative. Parmi les 17 populations 6 d’entre elles ont été étudiées dans trois plantations comparatives différentes (France, Espagne et Slovaquie). Nos résultats indiquent que chez le hêtre la vulnérabilité à la cavitation varie considérablement au sein de chaque population. Ils indiquent également que l’on observe peu de différenciation génétique entre populations. Les résultats montrent également que la plasticité phénotypique de la vulnérabilité à la cavitation est importante entre les plantations, et que le degré de cette plasticité peut varier d’une population à l’autre. Pour finir, nous avons regardé s’il existait des relations entre la vulnérabilité à la cavitation et des paramètres d’efficience hydraulique ainsi qu’avec l’efficience d’utilisation de l’eau. Nos résultats ne permettent pas de mettre en évidence des preuves d’un trade-off entre l’efficience et la sureté du xylème.

Background In a context of climate change, phenotypic plasticity provides long-lived species, such as trees, with the means to adapt to environmental variations occurring within a single generation. In eucalyptus plantations, water availability is a key factor limiting productivity. However, the molecular mechanisms underlying the adaptation of eucalyptus to water shortage remain unclear. In this study, we compared the molecular responses of two commercial eucalyptus hybrids during the dry season. Both hybrids differ in productivity when grown under water deficit. Results Pyrosequencing of RNA extracted from shoot apices provided extensive transcriptome coverage - a catalog of 129,993 unigenes (49,748 contigs and 80,245 singletons) was generated from 398 million base pairs, or 1.14 million reads. The pyrosequencing data enriched considerably existing Eucalyptus EST collections, adding 36,985 unigenes not previously represented. Digital analysis of read abundance in 14,460 contigs identified 1,280 that were differentially expressed between the two genotypes, 155 contigs showing differential expression between treatments (irrigated vs. non irrigated conditions during the dry season), and 274 contigs with significant genotype-by-treatment interaction. The more productive genotype displayed a larger set of genes responding to water stress. Moreover, stress signal transduction seemed to involve different pathways in the two genotypes, suggesting that water shortage induces distinct cellular stress cascades. Similarly, the response of functional proteins also varied widely between genotypes: the most productive genotype decreased expression of genes related to photosystem, transport and secondary metabolism, whereas genes related to primary metabolism and cell organisation were over-expressed. Conclusions For the most productive genotype, the ability to express a broader set of genes in response to water availability appears to be a key characteristic in the maintenance of biomass growth during the dry season. Its strategy may involve a decrease of photosynthetic activity during the dry season associated with resources reallocation through major changes in the expression of primary metabolism associated genes. Further efforts will be needed to assess the adaptive nature of the genes highlighted in this study.

National audience

National audience; Ce projet vise à mettre en interaction un robot autonome avec des cailles pendant leur développement post-natal. Dans ce système, le robot peut occuper une fonction maternelle. On souhaite faire varier et évoluer les fonctions implémentées sur le robot (apport thermique, locomotion, vocalisations) et son comportement (interactivité, rythmicité), pour ensuite mesurer les conséquences sur l’attachement des cailles au robot et sur leur développement comportemental. Cette approche expérimentale mixte basée sur l’interaction animal-robot, ou Ethorobotique, offre la possibilité de contrôler chaque dimension du comportement d’un des partenaires de la relation (le robot), et de mesurer la réaction de l’autre partenaire (l’animal) à chaque modification d’une de ces dimensions. Cette approche a prouvé sa validité chez d’autres espèces animales. Une originalité du projet Caillebot est d’utiliser l’Ethorobotique dans un cadre ontogénétique, pour aborder des questions relatives au développement comportemental. Il a en effet été montré que chez la caille japonaise, de nombreuses caractéristiques comportementales (e.g. rythmicité, émotivité, socialité) passent de la mère aux jeunes par voie non génétique au cours de la période de maternage. Les jeunes ont une grande plasticité phénotypique, et leur comportement est dans une large mesure façonné par l’interaction qu’ils ont avec la femelle qui les materne. Pour autant, les mécanismes et stimuli impliqués dans cette transmission non-génétique restent à découvrir, notamment le rôle relatif de chaque comportement manifesté par la mère (réchauffement, déplacements, appels). Nous espérons pouvoir répondre à certaines de ces questions en modifiant pas à pas les fonctions de Caillebot, et en mesurant si cela modifie la relation que les jeunes ont avec le robot, et la manière dont leur comportement se développe. Nous présentons des résultats préliminaires sur l’effet de la locomotion et de vocalisations non-interactives, ainsi que les étapes ultérieures du projet.

Aim To assess the effect of local adaptation and phenotypic plasticity on the potential distribution of species under future climate changes. Trees may be adapted to specific climatic conditions; however, species range predictions have classically been assessed by species distribution models (SDMs) that do not account for intra-specific genetic variability and phenotypic plasticity, because SDMs rely on the assumption that species respond homogeneously to climate change across their range, i.e. a species is equally adapted throughout its range, and all species are equally plastic. These assumptions could cause SDMs to exaggerate or underestimate species at risk under future climate change.Location The Iberian Peninsula.Methods Species distributions are predicted by integrating experimental data and modelling techniques. We incorporate plasticity and local adaptation into a SDM by calibrating models of tree survivorship with adaptive traits in provenance trials. Phenotypic plasticity was incorporated by calibrating our model with a climatic index that provides a measure of the differences between sites and provenances.Results We present a new modelling approach that is easy to implement and makes use of existing tree provenance trials to predict species distribution models under global warming. Our results indicate that the incorporation of intra-population genetic diversity and phenotypic plasticity in SDMs significantly altered their outcome. In comparing species range predictions, the decrease in area occupancy under global warming conditions is smaller when considering our survival–adaptation model than that predicted by a ‘classical SDM’ calibrated with presence–absence data. These differences in survivorship are due to both local adaptation and plasticity. Differences due to the use of experimental data in the model calibration are also expressed in our results: we incorporate a null model that uses survival data from all provenances together. This model always predicts less reduction in area occupancy for both species than the SDM calibrated with presence–absence.Main conclusions We reaffirm the importance of considering adaptive traits when predicting species distributions and avoiding the use of occurrence data as a predictive variable. In light of these recommendations, we advise that existing predictions of future species distributions and their component populations must be reconsidered.

Background To identify the determinants of invasiveness, comparisons of traits of invasive and native species are commonly performed. Invasiveness is generally linked to higher values of reproductive, physiological and growth-related traits of the invasives relative to the natives in the introduced range. Phenotypic plasticity of these traits has also been cited to increase the success of invasive species but has been little studied in invasive tree species. In a greenhouse experiment, we compared ecophysiological traits between an invasive species to Europe, Acer negundo, and early- and late-successional co-occurring native species, under different light, nutrient availability and disturbance regimes. We also compared species of the same species groups in situ, in riparian forests. Results Under non-limiting resources, A. negundo seedlings showed higher growth rates than the native species. However, A. negundo displayed equivalent or lower photosynthetic capacities and nitrogen content per unit leaf area compared to the native species; these findings were observed both on the seedlings in the greenhouse experiment and on adult trees in situ. These physiological traits were mostly conservative along the different light, nutrient and disturbance environments. Overall, under non-limiting light and nutrient conditions, specific leaf area and total leaf area of A. negundo were substantially larger. The invasive species presented a higher plasticity in allocation to foliage and therefore in growth with increasing nutrient and light availability relative to the native species. Conclusions The higher level of plasticity of the invasive species in foliage allocation in response to light and nutrient availability induced a better growth in non-limiting resource environments. These results give us more elements on the invasiveness of A. negundo and suggest that such behaviour could explain the ability of A. negundo to outperform native tree species, contributes to its spread in European resource-rich riparian forests and impedes its establishment under closed-canopy hardwood forests.

Diplôme : HDR; Ce mémoire en vue de l'obtention de l'Habilitation à Diriger des Recherches entre dans le cadre du programme national de la conservation des ressources génétiques du peuplier noir (Populus nigra L., famille des Salicaceae), espèce pionnière emblématique des forêts alluviales.

The rapid climate change, which we are currently witnessing, is already modifying the physiology and distribution of species. Predictions of changes in species distributions do not take evolutionary mechanisms and biotic interactions into account. Our main objective was to assess the inherent adaptive capacities of tree populations by i) quantifying the phenotypic variations of functional traits with altitude and ii) studying the extent to which these variations are environmentally driven (phenotypic plasticity) and/or genetically fixed (adaptation). The study took place in the French Pyrenees along an altitudinal gradient range of 1500 m corresponding on average to 8°C of thermal amplitude. We focused on two broadleaved species with a wide European distribution (sessile oak and common beech). This gradient was repeated in two parallel valleys, distant from 30 km. Altitudinal trends were investigated for several morphological, physiological and phenological traits in natural conditions (in situ), in a common garden experiment and in reciprocal transplant experiments (RTEs). The phenotypic variability observed in situ showed significant altitudinal trends for all the studied traits and followed similar patterns for both species. We established that together with temperature, it was also necessary to integrate the variations of atmospheric gas partial pressure along the altitudinal gradient. In the common garden experiment, our results showed that the altitudinal gradient induced genetic differentiations for growth, leaf phenology and several morphological and physiological traits. This experiment made it possible to demonstrate, for both species, a weaker effect of genetic variations than in situ observed variations, suggesting a strong effect of the environment on leaf functional traits. A higher intrapopulation than interpopulation genetic variability was also observed for all traits. Finally, the reciprocal transplant experiments highlighted a high magnitude of phenotypic plasticity whatever the trait and the species., Le changement climatique rapide auquel nous assistons actuellement est déjà en train de modifier le cycle de vie d’un grand nombre d’organismes. Des études basées sur des modèles d’enveloppe bioclimatique apportent des réponses mais ces prédictions de nouvelles aires de répartition ne tiennent pas compte d’une part de l’adaptation rapide des espèces (plasticité phénotypique et diversité génétique non neutre), et d’autre part des interactions interspécifiques ou de la dynamique des populations. Ce travail de recherche est centré sur les mécanismes permettant la persistance des individus dans un environnement changeant.Nous avons travaillé dans les Pyrénées françaises sur deux espèces à large répartition européenne (chêne sessile et hêtre commun) sur un gradient altitudinal de 1500 m de dénivelé correspondant en moyenne à 8°C d’amplitude thermique. Ce gradient a été répété dans deux vallées parallèles, distantes de 30 km. Basée sur l’étude de traits fonctionnels, nous avons caractérisé les variations altitudinales de traits morphologiques et physiologiques de ces caractères dans des conditions naturelles. Les capacités écophysiologiques apparaissent plus élevée pour le chêne et pour les populations de haute altitude, suggérant une adaptation locale à un environnement stressant. Dans une étude préliminaire, nous avons établi qu’il était nécessaire d’intégrer les variations de pression partielle de dioxyde de carbone et non se concentration dans les mesures d’échanges gazeux. Tous les traits fonctionnels mesurés en populations naturelles varient avec l’altitude. Ainsi la taille des feuilles diminue avec l’altitude tandis que les autres traits augmentent, avec des valeurs de 1.3 à 3.9 fois supérieures entre le haut et le bas du gradient tous traits confondus. Nous avons ensuite cherché à déterminer l’origine de ces variations phénotypiques. Une expérimentation en test de provenance a ainsi permis de déterminer les traits dont la variation in situ était en partie sous contrôle génétique. Les résultats de notre étude montrent que le gradient altitudinal a induit une différenciation génétique au niveau de la croissance, de la phénologie et de traits fonctionnels foliaires pour ces espèces, malgré la proximité des populations étudiées dans leur milieu naturel. Néanmoins, les capacités photosynthétiques pour le hêtre et la surface spécifique foliaire pour le chêne ne montre aucune différentiation génétique, ainsi que la densité stomatique pour les deux espèces. D’autre part, l’expérimentation de transplantations réciproques le long du gradient, a mis en évidence une forte plasticité phénotypique pour les deux espèces, ce qui suggère que les populations peuvent dans une certaine mesure répondre immédiatement aux variations climatiques rencontrées le long de ce gradient. Cependant, tandis que la température optimale pour la longueur de saison de végétation ne semble pas encore atteinte, les populations pourraient réagir négativement à une élévation de la température en terme de croissance. En conclusion, les mécanismes adaptatifs mis en évidence le long d’un gradient climatique naturel, pourraient permettre aux populations de faire face au changement climatique actuel.

Tests were carried out to determine whether variations in the hydraulic architecture of eight Populus deltoides×Populus nigra genotypes could be related to variations in leaf function and growth performance. Measurements were performed in a coppice plantation on 1-year-old shoots under optimal irrigation. Hydraulic architecture was characterized through estimates of hydraulic efficiency (the ratio of conducting sapwood area to leaf area, AX:AL; leaf- and xylem-specific hydraulic conductance of defoliated shoots, kSL and kSS, respectively; apparent whole-plant leaf-specific hydraulic conductance, kplant) and xylem safety (water potential inducing 50% loss in hydraulic conductance). The eight genotypes spanned a significant range of kSL from 2.63 kg s−1 m−2 MPa−1 to 4.18 kg s−1 m−2 MPa−1, variations being mostly driven by kSS rather than AX:AL. There was a strong trade-off between hydraulic efficiency and xylem safety. Values of kSL correlated positively with kplant, indicating that high-pressure flowmeter (HPFM) measurements of stem hydraulic efficiency accurately reflected whole-plant water transport efficiency of field-grown plants at maximum transpiration rate. No clear relationship could be found between hydraulic efficiency and either net CO2 assimilation rates, water-use efficiency estimates (intrinsic water-use efficiency and carbon isotope discrimination against 13C), or stomatal characteristics (stomatal density and stomatal pore area index). Estimates of hydraulic efficiency were negatively associated with relative growth rate. This unusual pattern, combined with the trade-off observed between hydraulic efficiency and xylem safety, provides the rationale for the positive link already reported between relative growth rate and xylem safety among the same eight P. deltoides×P. nigra genotypes.

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Diplôme : HDR

Diplôme : Dr. d'Université; Les pucerons sont d’importants ravageurs des cultures agronomiques qui se développent par parthénogénèse au printemps et en été. Ce mode de multiplication asexué explique leur importante dynamique démographique et les dégâts causés sur les cultures. Afin de survivre aux conditions environnementales délicates pendant la période hivernale, les pucerons produisent des individus sexués à la fin de l’été, lesquels vont s’accoupler pour produire un œuf résistant au froid. Ce polyphénisme de reproduction est principalement induit par la diminution de la photopériode à la fin de l’été. L’objectif de ce travail de thèse est donc de comprendre les bases génétiques et moléculaires de ce photopériodisme saisonnier chez les pucerons. Pour ce faire, l’approche transcriptomique a été choisie, avec mise au point et utilisation de la technique des puces à ADNc pour identifier des gènes puis des programmes génétiques régulés par la diminution de la photopériode. Différentes séries d’hybridations réalisées au moyen de 2 générations de lames de verres ont permis d’identifier des fonctions cellulaires impliquées dans la régulation du polyphénisme de reproduction. La détection d’une diminution de la photopériode pourrait ainsi impliquer les systèmes visuel et de photoréception. La modification de la structure de la cuticule induite par un changement de photopériode pourrait également constituer une voie de signalisation indiquant à l’insecte la diminution de la longueur du jour. Le système neuro-endocrine assurerait ensuite la transduction du signal photopériodique du cerveau jusqu’aux organes cibles, les ovarioles.Les résultats des analyses transcriptomiques ont également suggéré que les pucerons pourraient percevoir les modifications de la photopériode dès le stade embryonnaire, ce qui a été testé puis confirmé au moyen d’expérimentations biologiques spécifiques. Enfin, la réalisation d’analyses biologiques et transcriptomiques de la réponse du puceron à une diminution de la photopériode en conditions semi-naturelles a permis de confirmer l’implication des fonctions cellulaires détectées comme impliquées dans la régulation du polyphénisme de reproduction en conditions contrôlées

Les objectifs de ce travail de thèse étaient : (i) identifier les principaux compromis et covariations d’un ensemble de traits foliaires relatifs à l’acquisition du carbone et (ii) caractériser la variabilité de ces traits en réponse à l’éclairement (plasticité phénotypique) et la diversité interspécifique de cette plasticité chez des espèces de forêt tropicale humide. Les mesures ont été réalisées sur des semis de 13 espèces d’arbres élevés en conditions contrôlées dans 3 traitements d’éclairements relatifs distincts. Une analyse coût-bénéfice des traits du bilan de carbone foliaire a été centrée sur les coûts de construction du métamère (CCmetm), le temps de retour sur investissement (PBT) et la mesure des durées de vie des feuilles (LLS). Une forte diversité interspécifique a été observée pour l’ensemble des traits étudiés. Les espèces se répartissent le long d’un axe opposant durée de vie des feuilles et LMA (masse surfacique) d’un côté, aux capacités photosynthétiques (Asat), PNUE (Asat/N), respiration (Rd) et teneurs en azote (Nm) de l’autre. Ces résultats sont en adéquation avec le schéma universel d’acquisition des ressources proposé par Wright et al. (2004). Les relations entre LLS et PBT sont faibles et l’ensemble des espèces amortissent très largement leur CCmetm. De manière générale, le classement des espèces est maintenu d’un traitement à l’autre et, à l’exception des coûts de construction, seuls de faibles effets d’interaction ont été observés entre espèces et traitements. Le calcul d’un indice de plasticité a également permis de montrer qu’en dépit d’une certaine diversité interspécifique de la plasticité phénotypique, aucune espèce n’était globalement plus « plastique » que les autres sur l’ensemble des traits considérés. Enfin, si les espèces pionnières se distinguent nettement par leurs attributs, leur degré de plasticité n’est pas différent de celui des espèces de sous-bois., The aim of this research were (i) identify the main trade-off and covariations of a group of leaf traits related to carbon assimilation, and (ii) assess the irradiance-elicited plasticity, and test whether this plasticity differs among species of tropical rain forest. Measurements were made with saplings from 13 species growing under three levels of irradiance, provided by shading nets, in an open green-house. A cost benefit analysis was undertaken to quantify carbon balance of leaves metamers. Construction costs of metamers (CCmetm), payback time of the investment of carbon into leaf and metamer structure (PBT), and leaf life span (LLS) were recorded on the saplings. A large inter-specific diversity was recorded for all the traits, the species are scattered along a principal component axis opposing on one hand LSS and leaf mass-to-area ratio (LMA), and on the other hand, photosynthetic capacity, photosynthetic nitrogen use efficiency (PNUE), respiration (Rd) and leaf nitrogen content (N). These results are in agreement with the concept of “leaf economics spectrum” suggested by Wright et al. (2004). The relationship between LLS and PBT were very loose, which shows that all species fully cover the construction costs, even under very low irradiance. Species ranking was not modified by irradiance whatever the trait, and, except for specific construction costs, only very weak interactions were found between species and irradiance. The computation of a plasticity index allowed to demonstrate that despite some inter-specific diversity of the values taken by the index for some traits, there was no consistent difference among species, and none of them appeared consistently more plastic than the others. Even if the two pioneer species analysed here differed largely from the others, from the point of view of trait values, they displayed similar levels of plasticity.

In amphibians, embryonic exposure to chemical cues resulting from a predation event on conspecific eggs can influence hatching traits. However, there is no information on the precise origin of the active substances, or on the critical period of embryonic development mediating such a process. In this context, common frog (Rana temporaria L., 1758) eggs were exposed at Gosner stage 2, 16, or 20 to chemical cues simulating predation on whole eggs, jelly envelopes, or embryos. Embryonic movement rate, hatching time, and developmental stage at hatching appeared unaffected by the nature of the treatment. In contrast, the embryonic treatments strongly affected the morphology of hatchlings, with the groups exposed to crushed whole eggs and jelly envelopes showing longer (exposures at stages 16 and 20) and deeper (exposure at stage 20) tails than their unexposed counterparts. In addition, exposure at stage 20 to crushed embryos also produced hatchlings with longer tails than the controls. Thus, morphological plasticity at hatching can result from a relatively short period of embryonic exposure to conspecific chemical cues. This critical period occurs at the completion of neurulation (stage 16), with the most marked effects resulting from an exposure at the last stage of embryonic development (stage 20).; Chez les amphibiens, l'exposition embryonnaire aux substances issues d'actes de prédation sur des œufs de même espèce peut influencer les traits d'éclosion. Toutefois, l'origine précise des substances actives et la période critique de développement embryonnaire régulant ce processus demeurent méconnues. Dans ce contexte, des œufs de grenouille rousse (Rana temporaria L., 1758) ont été exposés aux stades 2, 16 ou 20 de Gosner à des signaux chimiques simulant la prédation sur des œufs entiers, des enveloppes gélatineuses ou des embryons. La nature du traitement est demeurée sans influence sur les mouvements embryonnaires, la date d'éclosion et le stade de développement à l'éclosion. En revanche, les traitements ont affecté très significativement la morphologie des néonates, les groupes exposés aux broyats d'œufs entiers et d'enveloppes gélatineuses présentant des queues plus longues (expositions aux stades 16 et 20) et plus hautes (exposition au stade 20) que leurs congénères non exposés. De plus, l'exposition au stade 20 au broyat d'embryons a également produit des néonates avec des queues plus longues. Par conséquent, la plasticité morphologique à l'éclosion peut résulter d'une exposition embryonnaire relativement courte aux signaux chimiques intraspécifiques. Cette période critique survient après la neurulation (stade 16), les effets morphologiques les plus marqués apparaissant lorsque l'exposition a lieu au dernier stade du développement embryonnaire (stade 20).

1 annexe 44p. Diplôme : Dr. d'Universite