1. Alpha-satellite RNA transcripts are repressed by centromere-nucleolus associations.
- Author
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Bury, Leah, Moodie, Brittania, Ly, Jimmy, McKay, Liliana S., Miga, Karen H. H., and Cheeseman, Iain M.
- Subjects
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CENTROMERE , *LINCRNA , *RNA , *CELL cycle , *RNA polymerases , *CELL anatomy , *CELL division - Abstract
Although originally thought to be silent chromosomal regions, centromeres are instead actively transcribed. However, the behavior and contributions of centromere-derived RNAs have remained unclear. Here, we used single-molecule fluorescence in-situ hybridization (smFISH) to detect alpha-satellite RNA transcripts in intact human cells. We find that alpha-satellite RNA- smFISH foci levels vary across cell lines and over the cell cycle, but do not remain associated with centromeres, displaying localization consistent with other long non-coding RNAs. Alpha-satellite expression occurs through RNA polymerase II-dependent transcription, but does not require established centromere or cell division components. Instead, our work implicates centromere-nucleolar interactions as repressing alpha-satellite expression. The fraction of nucleolar-localized centromeres inversely correlates with alpha-satellite transcripts levels across cell lines and transcript levels increase substantially when the nucleolus is disrupted. The control of alpha-satellite transcripts by centromere-nucleolar contacts provides a mechanism to modulate centromere transcription and chromatin dynamics across diverse cell states and conditions. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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