280 results on '"Guanylate Cyclase-Activating Proteins"'
Search Results
2. NMR and EPR-DEER Structure of a Dimeric Guanylate Cyclase Activator Protein‑5 from Zebrafish Photoreceptors
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Cudia, Diana, Roseman, Graham P, Assafa, Tufa E, Shahu, Manisha Kumari, Scholten, Alexander, Menke-Sell, Sarah-Karina, Yamada, Hiroaki, Koch, Karl-W, Milhauser, Glenn, and Ames, James B
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Biochemistry and Cell Biology ,Chemical Sciences ,Biological Sciences ,Rare Diseases ,Amino Acid Sequence ,Animals ,Cysteine ,Electron Spin Resonance Spectroscopy ,Guanylate Cyclase-Activating Proteins ,Magnesium ,Molecular Docking Simulation ,Mutation ,Nuclear Magnetic Resonance ,Biomolecular ,Protein Binding ,Protein Multimerization ,Protein Structure ,Quaternary ,Zebrafish ,Zebrafish Proteins ,Medicinal and Biomolecular Chemistry ,Medical Biochemistry and Metabolomics ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical biochemistry and metabolomics ,Medicinal and biomolecular chemistry - Abstract
Retinal guanylate cyclases (RetGCs) are regulated by a family of guanylate cyclase-activating proteins (called GCAP1-7). GCAPs form dimers that bind to Ca2+ and confer Ca2+ sensitive activation of RetGC during visual phototransduction. The GCAP5 homologue from zebrafish contains two nonconserved cysteine residues (Cys15 and Cys17) that bind to ferrous ion, which stabilizes GCAP5 dimerization and diminishes its ability to activate RetGC. Here, we present NMR and EPR-DEER structural analysis of a GCAP5 dimer in the Mg2+-bound, Ca2+-free, Fe2+-free activator state. The NMR-derived structure of GCAP5 is similar to the crystal structure of Ca2+-bound GCAP1 (root-mean-square deviation of 2.4 Å), except that the N-terminal helix of GCAP5 is extended by two residues, which allows the sulfhydryl groups of Cys15 and Cys17 to become more solvent exposed in GCAP5 to facilitate Fe2+ binding. Nitroxide spin-label probes were covalently attached to particular cysteine residues engineered in GCAP5: C15, C17, T26C, C28, N56C, C69, C105, N139C, E152C, and S159C. The intermolecular distance of each spin-label probe in dimeric GCAP5 (measured by EPR-DEER) defined restraints for calculating the dimer structure by molecular docking. The GCAP5 dimer possesses intermolecular hydrophobic contacts involving the side chain atoms of H18, Y21, M25, F72, V76, and W93, as well as an intermolecular salt bridge between R22 and D71. The structural model of the GCAP5 dimer was validated by mutations (H18E/Y21E, H18A/Y21A, R22D, R22A, M25E, D71R, F72E, and V76E) at the dimer interface that disrupt dimerization of GCAP5 and affect the activation of RetGC. We propose that GCAP5 dimerization may play a role in the Fe2+-dependent regulation of cyclase activity in zebrafish photoreceptors.
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- 2021
3. Structural Insights into Retinal Guanylate Cyclase Activator Proteins (GCAPs)
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Ames, James B
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Neurosciences ,Eye Disease and Disorders of Vision ,Animals ,Calcium ,Guanylate Cyclase-Activating Proteins ,Hydrophobic and Hydrophilic Interactions ,Iron ,Light Signal Transduction ,Models ,Molecular ,Protein Conformation ,Protein Multimerization ,Zebrafish ,Zebrafish Proteins ,phototransduction ,retinal guanylate cyclase ,calcium ,GCAP1 ,GCAP2 ,GCAP5 ,Other Chemical Sciences ,Genetics ,Other Biological Sciences ,Chemical Physics - Abstract
Retinal guanylate cyclases (RetGCs) promote the Ca2+-dependent synthesis of cGMP that coordinates the recovery phase of visual phototransduction in retinal rods and cones. The Ca2+-sensitive activation of RetGCs is controlled by a family of photoreceptor Ca2+ binding proteins known as guanylate cyclase activator proteins (GCAPs). The Mg2+-bound/Ca2+-free GCAPs bind to RetGCs and activate cGMP synthesis (cyclase activity) at low cytosolic Ca2+ levels in light-activated photoreceptors. By contrast, Ca2+-bound GCAPs bind to RetGCs and inactivate cyclase activity at high cytosolic Ca2+ levels found in dark-adapted photoreceptors. Mutations in both RetGCs and GCAPs that disrupt the Ca2+-dependent cyclase activity are genetically linked to various retinal diseases known as cone-rod dystrophies. In this review, I will provide an overview of the known atomic-level structures of various GCAP proteins to understand how protein dimerization and Ca2+-dependent conformational changes in GCAPs control the cyclase activity of RetGCs. This review will also summarize recent structural studies on a GCAP homolog from zebrafish (GCAP5) that binds to Fe2+ and may serve as a Fe2+ sensor in photoreceptors. The GCAP structures reveal an exposed hydrophobic surface that controls both GCAP1 dimerization and RetGC binding. This exposed site could be targeted by therapeutics designed to inhibit the GCAP1 disease mutants, which may serve to mitigate the onset of retinal cone-rod dystrophies.
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- 2021
4. Chemical shift assignments of retinal guanylyl cyclase activating protein 5 (GCAP5)
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Cudia, Diana and Ames, James B
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Biochemistry and Cell Biology ,Biological Sciences ,Eye Disease and Disorders of Vision ,Neurosciences ,Biotechnology ,Underpinning research ,1.1 Normal biological development and functioning ,Eye ,Amino Acid Sequence ,Animals ,Guanylate Cyclase-Activating Proteins ,Nuclear Magnetic Resonance ,Biomolecular ,Protein Structure ,Secondary ,Retina ,Zebrafish ,Zebrafish Proteins ,Retinal guanylyl cyclase ,RetGC ,GCAP5 ,EF-hand ,Phototransduction ,Biophysics ,Biochemistry and cell biology - Abstract
Retinal membrane guanylyl cyclase (RetGC) in photoreceptor rod and cone cells is regulated by a family of guanylyl cyclase activating proteins (GCAP1-7). GCAP5 is expressed in zebrafish photoreceptors and promotes Ca2+-dependent regulation of RetGC enzymatic activity that regulates visual phototransduction. We report NMR chemical shift assignments of the Ca2+-free activator form of GCAP5 (BMRB No. 27705).
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- 2019
5. Investigating the Ca2+-dependent and Ca2+-independent mechanisms for mammalian cone light adaptation.
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Vinberg, Frans and Kefalov, Vladimir
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Adaptation ,Ocular ,Animals ,Calcium ,Cyclic GMP ,Guanylate Cyclase-Activating Proteins ,Ions ,Kinetics ,Light ,Mice ,Mice ,Knockout ,Recoverin ,Retinal Cone Photoreceptor Cells ,Retinal Rod Photoreceptor Cells ,Up-Regulation - Abstract
Vision is mediated by two types of photoreceptors: rods, enabling vision in dim light; and cones, which function in bright light. Despite many similarities in the components of their respective phototransduction cascades, rods and cones have distinct sensitivity, response kinetics, and adaptation capacity. Cones are less sensitive and have faster responses than rods. In addition, cones can function over a wide range of light conditions whereas rods saturate in moderately bright light. Calcium plays an important role in regulating phototransduction and light adaptation of rods and cones. Notably, the two dominant Ca2+-feedbacks in rods and cones are driven by the identical calcium-binding proteins: guanylyl cyclase activating proteins 1 and 2 (GCAPs), which upregulate the production of cGMP; and recoverin, which regulates the inactivation of visual pigment. Thus, the mechanisms producing the difference in adaptation capacity between rods and cones have remained poorly understood. Using GCAPs/recoverin-deficient mice, we show that mammalian cones possess another Ca2+-dependent mechanism promoting light adaptation. Surprisingly, we also find that, unlike in mouse rods, a unique Ca2+-independent mechanism contributes to cone light adaptation. Our findings point to two novel adaptation mechanisms in mouse cones that likely contribute to the great adaptation capacity of cones over rods.
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- 2018
6. Guanylate cyclase-activating protein 2 contributes to phototransduction and light adaptation in mouse cone photoreceptors.
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Vinberg, Frans, Peshenko, Igor, Chen, Jeannie, Dizhoor, Alexander, and Kefalov, Vladimir
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calcium ,color vision ,cone photoreceptor ,guanylate cyclase (guanylyl cyclase) ,guanylate cyclase activating proteins ,light activation ,light adaptation ,photoreceptor ,photoresponse ,phototransduction ,retina ,vision ,Adaptation ,Ocular ,Animals ,Calcium ,Cyclic GMP ,Guanylate Cyclase-Activating Proteins ,Light Signal Transduction ,Mice ,Inbred C57BL ,Mice ,Knockout ,Retinal Cone Photoreceptor Cells ,Sodium-Calcium Exchanger - Abstract
Light adaptation of photoreceptor cells is mediated by Ca2+-dependent mechanisms. In darkness, Ca2+ influx through cGMP-gated channels into the outer segment of photoreceptors is balanced by Ca2+ extrusion via Na+/Ca2+, K+ exchangers (NCKXs). Light activates a G protein signaling cascade, which closes cGMP-gated channels and decreases Ca2+ levels in photoreceptor outer segment because of continuing Ca2+ extrusion by NCKXs. Guanylate cyclase-activating proteins (GCAPs) then up-regulate cGMP synthesis by activating retinal membrane guanylate cyclases (RetGCs) in low Ca2+ This activation of RetGC accelerates photoresponse recovery and critically contributes to light adaptation of the nighttime rod and daytime cone photoreceptors. In mouse rod photoreceptors, GCAP1 and GCAP2 both contribute to the Ca2+-feedback mechanism. In contrast, only GCAP1 appears to modulate RetGC activity in mouse cones because evidence of GCAP2 expression in cones is lacking. Surprisingly, we found that GCAP2 is expressed in cones and can regulate light sensitivity and response kinetics as well as light adaptation of GCAP1-deficient mouse cones. Furthermore, we show that GCAP2 promotes cGMP synthesis and cGMP-gated channel opening in mouse cones exposed to low Ca2+ Our biochemical model and experiments indicate that GCAP2 significantly contributes to the activation of RetGC1 at low Ca2+ when GCAP1 is not present. Of note, in WT mouse cones, GCAP1 dominates the regulation of cGMP synthesis. We conclude that, under normal physiological conditions, GCAP1 dominates the regulation of cGMP synthesis in mouse cones, but if its function becomes compromised, GCAP2 contributes to the regulation of phototransduction and light adaptation of cones.
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- 2018
7. GUCY2D Cone–Rod Dystrophy-6 Is a “Phototransduction Disease” Triggered by Abnormal Calcium Feedback on Retinal Membrane Guanylyl Cyclase 1
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Sato, Shinya, Peshenko, Igor V, Olshevskaya, Elena V, Kefalov, Vladimir J, and Dizhoor, Alexander M
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Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Eye Disease and Disorders of Vision ,Neurodegenerative ,Rare Diseases ,Neurosciences ,Animals ,Calcium ,Guanylate Cyclase ,Guanylate Cyclase-Activating Proteins ,Humans ,Mice ,Mice ,Transgenic ,Receptors ,Cell Surface ,Retina ,Retinal Degeneration ,Retinal Rod Photoreceptor Cells ,Retinitis Pigmentosa ,Vision ,Ocular ,calcium ,cGMP ,guanylyl cyclase ,photoreceptors ,phototransduction ,retinal degeneration ,Medical and Health Sciences ,Psychology and Cognitive Sciences ,Neurology & Neurosurgery - Abstract
The Arg838Ser mutation in retinal membrane guanylyl cyclase 1 (RetGC1) has been linked to autosomal dominant cone-rod dystrophy type 6 (CORD6). It is believed that photoreceptor degeneration is caused by the altered sensitivity of RetGC1 to calcium regulation via guanylyl cyclase activating proteins (GCAPs). To determine the mechanism by which this mutation leads to degeneration, we investigated the structure and function of rod photoreceptors in two transgenic mouse lines, 362 and 379, expressing R838S RetGC1. In both lines, rod outer segments became shorter than in their nontransgenic siblings by 3-4 weeks of age, before the eventual photoreceptor degeneration. Despite the shortening of their outer segments, the dark current of transgenic rods was 1.5-2.2-fold higher than in nontransgenic controls. Similarly, the dim flash response amplitude in R838S+ rods was larger, time to peak was delayed, and flash sensitivity was increased, all suggesting elevated dark-adapted free cGMP in transgenic rods. In rods expressing R838S RetGC1, dark-current noise increased and the exchange current, detected after a saturating flash, became more pronounced. These results suggest disrupted Ca2+ phototransduction feedback and abnormally high free-Ca2+ concentration in the outer segments. Notably, photoreceptor degeneration, which typically occurred after 3 months of age in R838S RetGC1 transgenic mice in GCAP1,2+/+ or GCAP1,2+/- backgrounds, was prevented in GCAP1,2-/- mice lacking Ca2+ feedback to guanylyl cyclase. In summary, the dysregulation of guanylyl cyclase in RetGC1-linked CORD6 is a "phototransduction disease," which means it is associated with increased free-cGMP and Ca2+ levels in photoreceptors.SIGNIFICANCE STATEMENT In a mouse model expressing human membrane guanylyl cyclase 1 (RetGC1, GUCY2D), a mutation associated with early progressing congenital blindness, cone-rod dystrophy type 6 (CORD6), deregulates calcium-sensitive feedback of phototransduction to the cyclase mediated by guanylyl cyclase activating proteins (GCAPs), which are calcium-sensor proteins. The abnormal calcium sensitivity of the cyclase increases cGMP-gated dark current in the rod outer segments, reshapes rod photoresponses, and triggers photoreceptor death. This work is the first to demonstrate a direct physiological effect of GUCY2D CORD6-linked mutation on photoreceptor physiology in vivo It also identifies the abnormal regulation of the cyclase by calcium-sensor proteins as the main trigger for the photoreceptor death.
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- 2018
8. Retinal guanylyl cyclase activating protein 1 forms a functional dimer.
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Lim, Sunghyuk, Roseman, Graham, Peshenko, Igor, Manchala, Grace, Cudia, Diana, Dizhoor, Alexander M, Millhauser, Glenn, and Ames, James B
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Animals ,Cattle ,Spin Labels ,Recombinant Proteins ,Electron Spin Resonance Spectroscopy ,Mutagenesis ,Site-Directed ,Allosteric Regulation ,Amino Acid Sequence ,Amino Acid Motifs ,Protein Conformation ,Dimerization ,Catalysis ,Models ,Molecular ,Guanylate Cyclase-Activating Proteins ,Molecular Docking Simulation ,Models ,Molecular ,Mutagenesis ,Site-Directed ,General Science & Technology - Abstract
Retinal guanylyl cyclases (RetGCs) in vertebrate photoreceptors are regulated by the guanylyl cyclase activator proteins (GCAP1 and GCAP2). Here, we report EPR double electron-electron resonance (DEER) studies on the most ubiquitous GCAP isoform, GCAP1 and site-directed mutagenesis analysis to determine an atomic resolution structural model of a GCAP1 dimer. Nitroxide spin-label probes were introduced at individual GCAP1 residues: T29C, E57C, E133C, and E154C. The intermolecular distance of each spin-label probe (measured by DEER) defined restraints for calculating the GCAP1 dimeric structure by molecular docking. The DEER-derived structural model of the GCAP1 dimer was similar within the experimental error for both the Mg2+-bound activator and Ca2+-bound inhibitor states (RMSD < 2.0 Å). The GCAP1 dimer possesses intermolecular hydrophobic contacts involving the side chain atoms of H19, Y22, F73 and V77. The structural model of the dimer was validated by GCAP1 mutations (H19R, Y22D, F73E, and V77E) at the dimer interface that each abolished protein dimerization. Previous studies have shown that each of these mutants either diminished or completely suppressed the ability of GCAP1 to activate the cyclase. These results suggest that GCAP1 dimerization may affect compartmentalization of GCAP1 in the photoreceptors and/or affect regulation of the cyclase activity.
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- 2018
9. Structural Characterization of Ferrous Ion Binding to Retinal Guanylate Cyclase Activator Protein 5 from Zebrafish Photoreceptors
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Lim, Sunghyuk, Scholten, Alexander, Manchala, Grace, Cudia, Diana, Zlomke-Sell, Sarah-Karina, Koch, Karl-W, and Ames, James B
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Amino Acid Sequence ,Animals ,Binding Sites ,Ferrous Compounds ,Guanylate Cyclase ,Guanylate Cyclase-Activating Proteins ,Light ,Mutation ,Nuclear Magnetic Resonance ,Biomolecular ,Photoreceptor Cells ,Vertebrate ,Protein Binding ,Protein Multimerization ,Retina ,Sequence Homology ,Amino Acid ,Zebrafish Proteins ,Medicinal and Biomolecular Chemistry ,Biochemistry and Cell Biology ,Medical Biochemistry and Metabolomics ,Biochemistry & Molecular Biology - Abstract
Sensory guanylate cyclases (zGCs) in zebrafish photoreceptors are regulated by a family of guanylate cyclase activator proteins (called GCAP1-7). GCAP5 contains two nonconserved cysteine residues (Cys15 and Cys17) that could in principle bind to biologically active transition state metal ions (Zn2+ and Fe2+). Here, we present nuclear magnetic resonance (NMR) and isothermal titration calorimetry (ITC) binding analyses that demonstrate the binding of one Fe2+ ion to two GCAP5 molecules (in a 1:2 complex) with a dissociation constant in the nanomolar range. At least one other Fe2+ binds to GCAP5 with micromolar affinity that likely represents electrostatic Fe2+ binding to the EF-hand loops. The GCAP5 double mutant (C15A/C17A) lacks nanomolar binding to Fe2+, suggesting that Fe2+ at this site is ligated directly by thiolate groups of Cys15 and Cys17. Size exclusion chromatography analysis indicates that GCAP5 forms a dimer in the Fe2+-free and Fe2+-bound states. NMR structural analysis and molecular docking studies suggest that a single Fe2+ ion is chelated by thiol side chains from Cys15 and Cys17 in the GCAP5 dimer, forming an [Fe(SCys)4] complex like that observed previously in two-iron superoxide reductases. Binding of Fe2+ to GCAP5 weakens its ability to activate photoreceptor human GC-E by decreasing GC activity >10-fold. Our results indicate a strong Fe2+-induced inhibition of GC by GCAP5 and suggest that GCAP5 may serve as a redox sensor in visual phototransduction.
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- 2017
10. Structure of Guanylyl Cyclase Activator Protein 1 (GCAP1) Mutant V77E in a Ca2+-free/Mg2+-bound Activator State*
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Lim, Sunghyuk, Peshenko, Igor V, Olshevskaya, Elena V, Dizhoor, Alexander M, and Ames, James B
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Biochemistry and Cell Biology ,Biological Sciences ,Amino Acid Sequence ,Amino Acid Substitution ,Animals ,Binding Sites ,Calcium ,Cattle ,Eye Proteins ,Guanylate Cyclase ,Guanylate Cyclase-Activating Proteins ,HEK293 Cells ,Humans ,Lipoylation ,Magnesium ,Models ,Molecular ,Molecular Sequence Data ,Mutation ,Myristic Acid ,Protein Conformation ,Protein Processing ,Post-Translational ,Protein Unfolding ,Receptors ,Cell Surface ,Recombinant Proteins ,Sequence Alignment ,calcium ,calcium-binding protein ,calorimetry ,guanylate cyclase ,nuclear magnetic resonance ,phototransduction ,vision ,Chemical Sciences ,Medical and Health Sciences ,Biochemistry & Molecular Biology ,Biological sciences ,Biomedical and clinical sciences ,Chemical sciences - Abstract
GCAP1, a member of the neuronal calcium sensor subclass of the calmodulin superfamily, confers Ca(2+)-sensitive activation of retinal guanylyl cyclase 1 (RetGC1). We present NMR resonance assignments, residual dipolar coupling data, functional analysis, and a structural model of GCAP1 mutant (GCAP1(V77E)) in the Ca(2+)-free/Mg(2+)-bound state. NMR chemical shifts and residual dipolar coupling data reveal Ca(2+)-dependent differences for residues 170-174. An NMR-derived model of GCAP1(V77E) contains Mg(2+) bound at EF2 and looks similar to Ca(2+) saturated GCAP1 (root mean square deviations = 2.0 Å). Ca(2+)-dependent structural differences occur in the fourth EF-hand (EF4) and adjacent helical region (residues 164-174 called the Ca(2+) switch helix). Ca(2+)-induced shortening of the Ca(2+) switch helix changes solvent accessibility of Thr-171 and Leu-174 that affects the domain interface. Although the Ca(2+) switch helix is not part of the RetGC1 binding site, insertion of an extra Gly residue between Ser-173 and Leu-174 as well as deletion of Arg-172, Ser-173, or Leu-174 all caused a decrease in Ca(2+) binding affinity and abolished RetGC1 activation. We conclude that Ca(2+)-dependent conformational changes in the Ca(2+) switch helix are important for activating RetGC1 and provide further support for a Ca(2+)-myristoyl tug mechanism.
- Published
- 2016
11. Identification of Target Binding Site in Photoreceptor Guanylyl Cyclase-activating Protein 1 (GCAP1)*
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Peshenko, Igor V, Olshevskaya, Elena V, Lim, Sunghyuk, Ames, James B, and Dizhoor, Alexander M
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Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Biological Sciences ,Eye Disease and Disorders of Vision ,Genetics ,Rare Diseases ,Amino Acid Substitution ,Animals ,Binding Sites ,Cattle ,Guanylate Cyclase ,Guanylate Cyclase-Activating Proteins ,HEK293 Cells ,Humans ,Multiprotein Complexes ,Mutation ,Missense ,Protein Structure ,Secondary ,Receptors ,Cell Surface ,Calcium-binding Proteins ,Cyclic GMP ,Eye ,Neurobiology ,Phototransduction ,Chemical Sciences ,Medical and Health Sciences ,Biochemistry & Molecular Biology ,Biological sciences ,Biomedical and clinical sciences ,Chemical sciences - Abstract
Retinal guanylyl cyclase (RetGC)-activating proteins (GCAPs) regulate visual photoresponse and trigger congenital retinal diseases in humans, but GCAP interaction with its target enzyme remains obscure. We mapped GCAP1 residues comprising the RetGC1 binding site by mutagenizing the entire surface of GCAP1 and testing the ability of each mutant to bind RetGC1 in a cell-based assay and to activate it in vitro. Mutations that most strongly affected the activation of RetGC1 localized to a distinct patch formed by the surface of non-metal-binding EF-hand 1, the loop and the exiting helix of EF-hand 2, and the entering helix of EF-hand 3. Mutations in the binding patch completely blocked activation of the cyclase without affecting Ca(2+) binding stoichiometry of GCAP1 or its tertiary fold. Exposed residues in the C-terminal portion of GCAP1, including EF-hand 4 and the helix connecting it with the N-terminal lobe of GCAP1, are not critical for activation of the cyclase. GCAP1 mutants that failed to activate RetGC1 in vitro were GFP-tagged and co-expressed in HEK293 cells with mOrange-tagged RetGC1 to test their direct binding in cyto. Most of the GCAP1 mutations introduced into the "binding patch" prevented co-localization with RetGC1, except for Met-26, Lys-85, and Trp-94. With these residues mutated, GCAP1 completely failed to stimulate cyclase activity but still bound RetGC1 and competed with the wild type GCAP1. Thus, RetGC1 activation by GCAP1 involves establishing a tight complex through the binding patch with an additional activation step involving Met-26, Lys-85, and Trp-94.
- Published
- 2014
12. Structural insights for activation of retinal guanylate cyclase by GCAP1.
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Lim, Sunghyuk, Peshenko, Igor V, Dizhoor, Alexander M, and Ames, James B
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Retina ,Animals ,Cattle ,Calcium ,Guanylate Cyclase ,Nuclear Magnetic Resonance ,Biomolecular ,Sequence Alignment ,Enzyme Activation ,Amino Acid Sequence ,Protein Conformation ,Protein Binding ,Models ,Molecular ,Molecular Sequence Data ,Guanylate Cyclase-Activating Proteins ,Protein Interaction Domains and Motifs ,Protein Multimerization ,Models ,Molecular ,Nuclear Magnetic Resonance ,Biomolecular ,General Science & Technology - Abstract
Guanylyl cyclase activating protein 1 (GCAP1), a member of the neuronal calcium sensor (NCS) subclass of the calmodulin superfamily, confers Ca(2+)-sensitive activation of retinal guanylyl cyclase 1 (RetGC1) upon light activation of photoreceptor cells. Here we present NMR assignments and functional analysis to probe Ca(2+)-dependent structural changes in GCAP1 that control activation of RetGC. NMR assignments were obtained for both the Ca(2+)-saturated inhibitory state of GCAP1 versus a GCAP1 mutant (D144N/D148G, called EF4mut), which lacks Ca(2+) binding in EF-hand 4 and models the Ca(2+)-free/Mg(2+)-bound activator state of GCAP1. NMR chemical shifts of backbone resonances for Ca(2+)-saturated wild type GCAP1 are overall similar to those of EF4mut, suggesting a similar main chain structure for assigned residues in both the Ca(2+)-free activator and Ca(2+)-bound inhibitor states. This contrasts with large Ca(2+)-induced chemical shift differences and hence dramatic structural changes seen for other NCS proteins including recoverin and NCS-1. The largest chemical shift differences between GCAP1 and EF4mut are seen for residues in EF4 (S141, K142, V145, N146, G147, G149, E150, L153, E154, M157, E158, Q161, L166), but mutagenesis of EF4 residues (F140A, K142D, L153R, L166R) had little effect on RetGC1 activation. A few GCAP1 residues in EF-hand 1 (K23, T27, G32) also show large chemical shift differences, and two of the mutations (K23D and G32N) each decrease the activation of RetGC, consistent with a functional conformational change in EF1. GCAP1 residues at the domain interface (V77, A78, L82) have NMR resonances that are exchange broadened, suggesting these residues may be conformationally dynamic, consistent with previous studies showing these residues are in a region essential for activating RetGC1.
- Published
- 2013
13. Speed, sensitivity, and stability of the light response in rod and cone photoreceptors: Facts and models
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Korenbrot, Juan I
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Biomedical and Clinical Sciences ,Ophthalmology and Optometry ,Neurosciences ,Eye Disease and Disorders of Vision ,Underpinning research ,1.1 Normal biological development and functioning ,Generic health relevance ,Adaptation ,Ocular ,Animals ,Calcium ,Guanylate Cyclase-Activating Proteins ,Humans ,Ion Channels ,Models ,Animal ,Models ,Biological ,Retinal Cone Photoreceptor Cells ,Retinal Rod Photoreceptor Cells ,Rod Cell Outer Segment ,Signal Transduction ,Photoreceptors ,Ion channels ,cGMP ,Transduction ,Retina ,Rod ,Cone ,Mathematical models ,Opthalmology and Optometry ,Ophthalmology & Optometry ,Ophthalmology and optometry - Abstract
The light responses of rod and cone photoreceptors in the vertebrate retina are quantitatively different, yet extremely stable and reproducible because of the extraordinary regulation of the cascade of enzymatic reactions that link photon absorption and visual pigment excitation to the gating of cGMP-gated ion channels in the outer segment plasma membrane. While the molecular scheme of the phototransduction pathway is essentially the same in rods and cones, the enzymes and protein regulators that constitute the pathway are distinct. These enzymes and regulators can differ in the quantitative features of their functions or in concentration if their functions are similar or both can be true. The molecular identity and distinct function of the molecules of the transduction cascade in rods and cones are summarized. The functional significance of these molecular differences is examined with a mathematical model of the signal-transducing enzymatic cascade. Constrained by available electrophysiological, biochemical and biophysical data, the model simulates photocurrents that match well the electrical photoresponses measured in both rods and cones. Using simulation computed with the mathematical model, the time course of light-dependent changes in enzymatic activities and second messenger concentrations in non-mammalian rods and cones are compared side by side.
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- 2012
14. A hybrid stochastic/deterministic model of single photon response and light adaptation in mouse rods
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Sabrina Asteriti, Karl-Wilhelm Koch, Charlotte Johanna Beelen, Daniele Dell'Orco, and Lorenzo Cangiano
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ADP ,guanosine-5′-triphosphate ,completely substituted mutant of rhodopsin ,SPR ,Rn, activated rhodopsin that has been phosphorylated n times ,Biochemistry ,effector of the phototransduction cascade ,G protein/transducin ,FFT ,GPCR ,Gt ,photons ,GC ,arrestin ,cyclic nucleotide-gated (channel) ,time to peak ,TTP, time to peak ,activated PDE ,ROS ,Stochastic simulation ,Rhodopsin kinase ,HSDM, hybrid stochastic/deterministic model ,RGS ,Cascade ,Transducin ,Gβγ ,standard deviation ,background illumination ,Visual phototransduction ,ΔJ, photocurrent ,TTP ,RGS, regulator of G protein signaling ,Biophysics ,RK ,regulator of G protein signaling ,BG ,PDE ,photocurrent ,ΔU ,Light adaptation ,CSM ,Gα ,Genetics ,G protein-coupled receptor ,GPCR, G protein-coupled receptor ,β- and γ-subunit of the G protein ,SD ,Ph ,cyclic guanosine monophosphate ,rhodopsin kinase ,Dynamic modeling ,Phototransduction ,Systems biology ,CSM, completely substituted mutant of rhodopsin ,coefficient of variation ,multiple photon response ,Ph, photons ,rhodopsin ,cGMP, cyclic guanosine monophosphate ,ΔJ ,GTP ,TP248.13-248.65 ,Arr, arrestin ,Rec, recoverin ,Photon ,MPR ,genetic structures ,PDE, phosphodiesterase 6 ,recoverin ,ΔU, photovoltage ,Gβγ, β- and γ-subunit of the G protein ,phosphodiesterase 6 ,GDP ,Structural Biology ,photovoltage ,DM ,hybrid stochastic/deterministic model ,R, rhodopsin ,Physics ,Rn ,biology ,adenosine-5′-triphosphate ,adenosine diphosphate ,GCAPs ,GCAPs, guanylate cyclase-activating proteins ,HSDM ,Computer Science Applications ,FFT, fast Fourier-transform ,guanylate cyclase ,α-subunit of the G protein ,Gα, α-subunit of the G protein ,BG, background illumination ,fast Fourier-transform ,Rhodopsin ,CNG, cyclic nucleotide-gated (channel) ,SPR, single photon response ,CNG ,guanylate cyclase-activating proteins ,CV ,Arr ,E, effector of the phototransduction cascade, activated PDE ,GC, guanylate cyclase ,Research Article ,Biotechnology ,Adaptation (eye) ,guanosine-5′-diphosphate ,activated rhodopsin that has been phosphorylated n times ,deterministic model ,RK, rhodopsin kinase ,Patch clamp ,ROS, rod outer segment ,ComputingMethodologies_COMPUTERGRAPHICS ,GTP, guanosine-5′-triphosphate ,Gt, G protein/transducin ,Rec ,CV, coefficient of variation ,GDP, guanosine-5′-diphosphate ,ATP, adenosine-5′-triphosphate ,MPR, multiple photon response ,rod outer segment ,ADP, adenosine diphosphate ,ATP ,cGMP ,biology.protein ,single photon response ,sense organs ,DM, deterministic model ,SD, standard deviation - Abstract
Graphical abstract, Highlights • A hybrid stochastic/deterministic model of mouse rod phototransduction is presented. • Rod photocurrent to photovoltage conversion in darkness is accurately characterized. • Photoresponses to dim and bright stimuli and in various mutants are well reproduced. • Recently debated molecular mechanisms of the phototransduction cascade are examined., The phototransduction cascade is paradigmatic for signaling pathways initiated by G protein-coupled receptors and is characterized by a fine regulation of photoreceptor sensitivity and electrical response to a broad range of light stimuli. Here, we present a biochemically comprehensive model of phototransduction in mouse rods based on a hybrid stochastic and deterministic mathematical framework, and a quantitatively accurate description of the rod impedance in the dark. The latter, combined with novel patch clamp recordings from rod outer segments, enables the interconversion of dim flash responses between photovoltage and photocurrent and thus direct comparison with the simulations. The model reproduces the salient features of the experimental photoresponses at very dim and bright stimuli, for both normal photoreceptors and those with genetically modified cascade components. Our modelling approach recapitulates a number of recent findings in vertebrate phototransduction. First, our results are in line with the recently established requirement of dimeric activation of PDE6 by transducin and further show that such conditions can be fulfilled at the expense of a significant excess of G protein activated by rhodopsin. Secondly, simulations suggest a crucial role of the recoverin-mediated Ca2+-feedback on rhodopsin kinase in accelerating the shutoff, when light flashes are delivered in the presence of a light background. Finally, stochastic simulations suggest that transient complexes between dark rhodopsin and transducin formed prior to light stimulation increase the reproducibility of single photon responses. Current limitations of the model are likely associated with the yet unknown mechanisms governing the shutoff of the cascade.
- Published
- 2021
15. Prediction and validation of GUCA2B as the hub-gene in colorectal cancer based on co-expression network analysis: In-silico and in-vivo study
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Samira Nomiri, Reyhane Hoshyar, Elham Chamani, Zohreh Rezaei, Fatemeh Salmani, Pegah Larki, Tahmine Tavakoli, Faranak gholipour, Neda Jalili Tabrizi, Afshin Derakhshani, Mariacarmela Santarpia, Tindara Franchina, Oronzo Brunetti, Nicola Silvestris, and Hossein Safarpour
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Pharmacology ,Neoplastic ,Tumor ,WGCNA ,Colorectal cancer ,GUCA2B ,Molecular pathogenicity ,Transcriptome analysis ,Apoptosis ,Biomarkers, Tumor ,Colorectal Neoplasms ,Gene Expression Regulation, Neoplastic ,Gene Regulatory Networks ,Guanylate Cyclase-Activating Proteins ,Humans ,Intestinal Mucosa ,MicroRNAs ,Natriuretic Peptides ,Transcriptome ,General Medicine ,RM1-950 ,Gene Expression Regulation ,Therapeutics. Pharmacology ,Biomarkers - Abstract
Background: Several serious attempts to treat colorectal cancer have been made in recent decades. However, no effective treatment has yet been discovered due to the complexities of its etiology. Methods: we used Weighted Gene Co-expression Network Analysis (WGCNA) to identify key modules, hub-genes, and mRNA-miRNA regulatory networks associated with CRC. Next, enrichment analysis of modules has been performed using Cluepedia. Next, quantitative real-time PCR (RT-qPCR) was used to validate the expression of selected hub-genes in CRC tissues. Results: Based on the WGCNA results, the brown module had a significant positive correlation (r = 0.98, p-value=9e-07) with CRC. Using the survival and DEGs analyses, 22 genes were identified as hub-genes. Next, three candidate hub-genes were selected for RT-qPCR validation, and 22 pairs of cancerous and non-cancerous tissues were collected from CRC patients referred to the Gastroenterology and Liver Clinic. The RT-qPCR results revealed that the expression of GUCA2B was significantly reduced in CRC tissues, which is consistent with the results of differential expression analysis. Finally, top miRNAs correlated with GUCA2B were identified, and ROC analyses revealed that GUCA2B has a high diagnostic performance for CRC. Conclusions: The current study discovered key modules and GUCA2B as a hub-gene associated with CRC, providing references to understand the pathogenesis and be considered a novel candidate to CRC target therapy.
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- 2022
16. Two clusters of surface-exposed amino acid residues enable high-affinity binding of retinal degeneration-3 (RD3) protein to retinal guanylyl cyclase
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Alexander M. Dizhoor and Igor V. Peshenko
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0301 basic medicine ,Retinal degeneration ,retina ,Mutation, Missense ,Receptors, Cell Surface ,phototransduction ,Biochemistry ,Cyclase ,03 medical and health sciences ,chemistry.chemical_compound ,RetGC ,Calcium-binding protein ,calcium-binding protein ,medicine ,Animals ,Humans ,guanylate cyclase (guanylyl cyclase) ,Binding site ,Eye Proteins ,Molecular Biology ,030102 biochemistry & molecular biology ,Chemistry ,HEK 293 cells ,GCAP ,Retinal ,Cell Biology ,medicine.disease ,photoreceptor ,Guanylate Cyclase-Activating Proteins ,Cell biology ,HEK293 Cells ,030104 developmental biology ,Amino Acid Substitution ,Guanylate Cyclase ,retinal degeneration ,Cattle ,Signal transduction ,RD3 ,cyclic GMP (cGMP) ,Signal Transduction ,Protein Binding ,Visual phototransduction - Abstract
Retinal degeneration-3 (RD3) protein protects photoreceptors from degeneration by preventing retinal guanylyl cyclase (RetGC) activation via calcium-sensing guanylyl cyclase–activating proteins (GCAP), and RD3 truncation causes severe congenital blindness in humans and other animals. The three-dimensional structure of RD3 has recently been established, but the molecular mechanisms of its inhibitory binding to RetGC remain unclear. Here, we report the results of probing 133 surface-exposed residues in RD3 by single substitutions and deletions to identify side chains that are critical for the inhibitory binding of RD3 to RetGC. We tested the effects of these substitutions and deletions in vitro by reconstituting purified RD3 variants with GCAP1-activated human RetGC1. Although the vast majority of the surface-exposed residues tolerated substitutions without loss of RD3's inhibitory activity, substitutions in two distinct narrow clusters located on the opposite sides of the molecule effectively suppressed RD3 binding to the cyclase. The first surface-exposed cluster included residues adjacent to Leu63 in the loop connecting helices 1 and 2. The second cluster surrounded Arg101 on a surface of helix 3. Single substitutions in those two clusters drastically, i.e. up to 245-fold, reduced the IC50 for the cyclase inhibition. Inactivation of the two binding sites completely disabled binding of RD3 to RetGC1 in living HEK293 cells. In contrast, deletion of 49 C-terminal residues did not affect the apparent affinity of RD3 for RetGC. Our findings identify the functional interface on RD3 required for its inhibitory binding to RetGC, a process essential for protecting photoreceptors from degeneration.
- Published
- 2020
17. The Transition of Photoreceptor Guanylate Cyclase Type 1 to the Active State
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Manisha Kumari, Shahu, Fabian, Schuhmann, Alexander, Scholten, Ilia A, Solov'yov, and Karl-Wilhelm, Koch
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Alanine ,Guanylate Cyclase ,Retinal Cone Photoreceptor Cells ,Humans ,Guanylate Cyclase-Activating Proteins ,Hormones - Abstract
Membrane-bound guanylate cyclases (GCs), which synthesize the second messenger guanosine-3', 5'-cyclic monophosphate, differ in their activation modes to reach the active state. Hormone peptides bind to the extracellular domain in hormone-receptor-type GCs and trigger a conformational change in the intracellular, cytoplasmic part of the enzyme. Sensory GCs that are present in rod and cone photoreceptor cells have intracellular binding sites for regulatory Ca
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- 2022
18. Molecular Properties of Human Guanylate Cyclase-Activating Protein 3 (GCAP3) and Its Possible Association with Retinitis Pigmentosa
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Anna Avesani, Laura Bielefeld, Nicole Weisschuh, Valerio Marino, Pascale Mazzola, Katarina Stingl, Tobias B. Haack, Karl-Wilhelm Koch, and Daniele Dell’Orco
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retina ,vision ,phototransduction ,guanylate cyclase (guanylyl cyclase) ,cyclic GMP ,calcium-binding proteins ,retinitis pigmentosa ,neurodegenerative disease ,GUCA1C ,GCAP ,Catalysis ,Inorganic Chemistry ,Animals ,Humans ,Physical and Theoretical Chemistry ,Molecular Biology ,Spectroscopy ,Organic Chemistry ,Calcium-Binding Proteins ,General Medicine ,Guanylate Cyclase-Activating Proteins ,Computer Science Applications ,Guanylate Cyclase ,Retinal Cone Photoreceptor Cells ,Calcium ,Cattle ,Retinitis Pigmentosa - Abstract
The cone-specific guanylate cyclase-activating protein 3 (GCAP3), encoded by the GUCA1C gene, has been shown to regulate the enzymatic activity of membrane-bound guanylate cyclases (GCs) in bovine and teleost fish photoreceptors, to an extent comparable to that of the paralog protein GCAP1. To date, the molecular mechanisms underlying GCAP3 function remain largely unexplored. In this work, we report a thorough characterization of the biochemical and biophysical properties of human GCAP3, moreover, we identified an isolated case of retinitis pigmentosa, in which a patient carried the c.301G>C mutation in GUCA1C, resulting in the substitution of a highly conserved aspartate residue by a histidine (p.(D101H)). We found that myristoylated GCAP3 can activate GC1 with a similar Ca2+-dependent profile, but significantly less efficiently than GCAP1. The non-myristoylated form did not induce appreciable regulation of GC1, nor did the p.D101H variant. GCAP3 forms dimers under physiological conditions, but at odds with its paralogs, it tends to form temperature-dependent aggregates driven by hydrophobic interactions. The peculiar properties of GCAP3 were confirmed by 2 ms molecular dynamics simulations, which for the p.D101H variant highlighted a very high structural flexibility and a clear tendency to lose the binding of a Ca2+ ion to EF3. Overall, our data show that GCAP3 has unusual biochemical properties, which make the protein significantly different from GCAP1 and GCAP2. Moreover, the newly identified point mutation resulting in a substantially unfunctional protein could trigger retinitis pigmentosa through a currently unknown mechanism.
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- 2022
19. Normal GCAPs partly compensate for altered cGMP signaling in retinal dystrophies associated with mutations in GUCA1A
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Giuditta Dal Cortivo and Daniele Dell'Orco
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0301 basic medicine ,Light Signal Transduction ,genetic structures ,In silico ,lcsh:Medicine ,Receptors, Cell Surface ,medicine.disease_cause ,Biochemistry ,Article ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,Retinal Dystrophies ,medicine ,Animals ,Humans ,Receptor ,lcsh:Science ,Cyclic GMP ,Mutation ,Multidisciplinary ,030102 biochemistry & molecular biology ,lcsh:R ,Retinal ,Neurochemistry ,Models, Theoretical ,Guanylate Cyclase-Activating Proteins ,Cell biology ,030104 developmental biology ,chemistry ,Guanylate Cyclase ,Calcium ,lcsh:Q ,Signal transduction ,Visual system ,Algorithms ,Intracellular ,Signal Transduction ,Visual phototransduction - Abstract
Missense mutations in the GUCA1A gene encoding guanylate cyclase-activating protein 1 (GCAP1) are associated with autosomal dominant cone/cone-rod (CORD) dystrophies. The nature of the inheritance pattern implies that a pool of normal GCAP proteins is present in photoreceptors together with the mutated variant. To assess whether human GCAP1 and GCAP2 may similarly regulate the activity of the retinal membrane guanylate cyclase GC-1 (GC-E) in the presence of the recently discovered E111V-GCAP1 CORD-variant, we combined biochemical and in silico assays. Surprisingly, human GCAP2 does not activate GC1 over the physiological range of Ca2+ whereas wild-type GCAP1 significantly attenuates the dysregulation of GC1 induced by E111V-GCAP1. Simulation of the phototransduction cascade in a well-characterized murine system, where GCAP2 is able to activate the GC1, suggests that both GCAPs can act in a synergic manner to mitigate the effects of the CORD-mutation. We propose the existence of a species-dependent compensatory mechanism. In murine photoreceptors, slight increases of wild-type GCAPs levels may significantly attenuate the increase in intracellular Ca2+ and cGMP induced by E111V-GCAP1 in heterozygous conditions. In humans, however, the excess of wild-type GCAP1 may only partly attenuate the mutant-induced dysregulation of cGMP signaling due to the lack of GC1-regulation by GCAP2.
- Published
- 2019
20. A Novel
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Amedeo, Biasi, Valerio, Marino, Giuditta, Dal Cortivo, Paolo Enrico, Maltese, Antonio Mattia, Modarelli, Matteo, Bertelli, Leonardo, Colombo, and Daniele, Dell'Orco
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Male ,Light Signal Transduction ,Adolescent ,GUCA1A ,phototransduction ,Retina ,Article ,calcium binding proteins ,Retinal Rod Photoreceptor Cells ,neuronal calcium sensor ,Humans ,Cone Dystrophy ,Child ,Cyclic GMP ,cone dystrophy ,guanylyl cyclase ,photoreceptors ,Middle Aged ,Guanylate Cyclase-Activating Proteins ,Pedigree ,Guanylate Cyclase ,Mutation ,retinal degeneration ,Calcium ,Female ,Signal Transduction - Abstract
Guanylate cyclase-activating protein 1 (GCAP1), encoded by the GUCA1A gene, is a neuronal calcium sensor protein involved in shaping the photoresponse kinetics in cones and rods. GCAP1 accelerates or slows the cGMP synthesis operated by retinal guanylate cyclase (GC) based on the light-dependent levels of intracellular Ca2+, thereby ensuring a timely regulation of the phototransduction cascade. We found a novel variant of GUCA1A in a patient affected by autosomal dominant cone dystrophy (adCOD), leading to the Asn104His (N104H) amino acid substitution at the protein level. While biochemical analysis of the recombinant protein showed impaired Ca2+ sensitivity of the variant, structural properties investigated by circular dichroism and limited proteolysis excluded major structural rearrangements induced by the mutation. Analytical gel filtration profiles and dynamic light scattering were compatible with a dimeric protein both in the presence of Mg2+ alone and Mg2+ and Ca2+. Enzymatic assays showed that N104H-GCAP1 strongly interacts with the GC, with an affinity that doubles that of the WT. The doubled IC50 value of the novel variant (520 nM for N104H vs. 260 nM for the WT) is compatible with a constitutive activity of GC at physiological levels of Ca2+. The structural region at the interface with the GC may acquire enhanced flexibility under high Ca2+ conditions, as suggested by 2 μs molecular dynamics simulations. The altered interaction with GC would cause hyper-activity of the enzyme at both low and high Ca2+ levels, which would ultimately lead to toxic accumulation of cGMP and Ca2+ in the photoreceptor outer segment, thus triggering cell death.
- Published
- 2021
21. Retinal degeneration-3 protein attenuates photoreceptor degeneration in transgenic mice expressing dominant mutation of human retinal guanylyl cyclase
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Elena V. Olshevskaya, Alexander M. Dizhoor, and Igor V. Peshenko
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Retinal degeneration ,genetic structures ,CORD6, cone–rod dystrophy 6 ,ONL, outer nuclear layer ,Biochemistry ,chemistry.chemical_compound ,Mice ,GCAP, guanylyl cyclase–activating protein ,RD3, retinal degeneration-3 protein ,Mice, Knockout ,medicine.diagnostic_test ,OCT, optical coherence tomography ,CNG, cyclic nucleotide–gated channel ,Nuclear Proteins ,Photoreceptor outer segment ,eye ,Cell biology ,Isoenzymes ,medicine.anatomical_structure ,calcium-binding proteins ,GUCY2D ,TTBS, Tris-buffered saline containing 0.5% Tween-20 ,RD3 ,Retinitis Pigmentosa ,Research Article ,Photoreceptor Cells, Vertebrate ,Receptors, Cell Surface ,HEK293, human embryonic kidney cells 293 ,LCA12, Leber's congenital amaurosis type 12 ,cyclic GMP ,RetGC ,medicine ,RetGC, the retinal membrane guanylyl cyclase ,Animals ,Humans ,ROS, rod outer segment ,guanylate cyclase (guanylyl cyclase) ,Outer nuclear layer ,Molecular Biology ,Retina ,ERG, electroretinography ,GCAP ,Dystrophy ,Retinal ,Cell Biology ,medicine.disease ,photoreceptor ,Guanylate Cyclase-Activating Proteins ,HEK293 Cells ,chemistry ,Guanylate Cyclase ,Mutation ,retinal degeneration ,sense organs ,Electroretinography - Abstract
Different forms of photoreceptor degeneration cause blindness. Retinal degeneration-3 protein (RD3) deficiency in photoreceptors leads to recessive congenital blindness. We proposed that aberrant activation of the retinal membrane guanylyl cyclase (RetGC) by its calcium-sensor proteins (guanylyl cyclase–activating protein [GCAP]) causes this retinal degeneration and that RD3 protects photoreceptors by preventing such activation. We here present in vivo evidence that RD3 protects photoreceptors by suppressing activation of both RetGC1 and RetGC2 isozymes. We further suggested that insufficient inhibition of RetGC by RD3 could contribute to some dominant forms of retinal degeneration. The R838S substitution in RetGC1 that causes autosomal-dominant cone–rod dystrophy 6, not only impedes deceleration of RetGC1 activity by Ca2+GCAPs but also elevates this isozyme's resistance to inhibition by RD3. We found that RD3 prolongs the survival of photoreceptors in transgenic mice harboring human R838S RetGC1 (R838S+). Overexpression of GFP-tagged human RD3 did not improve the calcium sensitivity of cGMP production in R838S+ retinas but slowed the progression of retinal blindness and photoreceptor degeneration. Fluorescence of the GFP-tagged RD3 in the retina only partially overlapped with immunofluorescence of RetGC1 or GCAP1, indicating that RD3 separates from the enzyme before the RetGC1:GCAP1 complex is formed in the photoreceptor outer segment. Most importantly, our in vivo results indicate that, in addition to the abnormal Ca2+ sensitivity of R838S RetGC1 in the outer segment, the mutated RetGC1 becomes resistant to inhibition by RD3 in a different cellular compartment(s) and suggest that RD3 overexpression could be utilized to reduce the severity of cone–rod dystrophy 6 pathology.
- Published
- 2021
22. Caracterização farmacológica do ativador da guanilato ciclase solúvel, BAY 60-2770, em artéria pulmonar isolada de coelho
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Faria, Wagner Mendes, 1972, Mónica, Fabíola Zakia, 1980, Moreno Junior, Heitor, Delbin, Maria Andréia, Universidade Estadual de Campinas. Faculdade de Ciências Médicas, Programa de Pós-Graduação em Farmacologia, and UNIVERSIDADE ESTADUAL DE CAMPINAS
- Subjects
Pulmonary artery ,Guanylate cyclase-activating proteins ,Hipertensão pulmonar ,Hypertension, Pulmonary ,Artéria pulmonar ,Proteínas ativadoras de guanilato ciclase ,Guanylate ciclase, Pharmacology ,Guanilato ciclase - Farmacologia ,BAY 60-2770 - Abstract
Orientador: Fabíola Taufic Monica Iglesias Dissertação (mestrado) - Universidade Estadual de Campinas, Faculdade de Ciências Médicas Resumo: Duas classes de medicamentos denominadas estimuladores e ativadores da guanilato ciclase solúvel (GCs) foram desenvolvidas para uso terapêutico em situações patológicas onde há menor formação ou biodisponibilidade NO ou tolerância farmacológica. A GCs é uma enzima heterodímera, composta pelas subunidades alfa (?) e beta (?), nas quais há a presença do grupo prostético heme e que catalisa a conversão da guanosina trifosfato (GTP) em guanosina monofosfato cíclico (GMPc) pela ação do NO. Em situações patológicas o átomo de ferro pode encontrar-se na sua forma oxidada (Fe3+), diminuindo assim a resposta máxima do óxido nítrico (NO). A principal diferença entre os moduladores da GCs é que os ativadores (BAY 58-2667, HMR 1766, BAY 60-2770) atuam de maneira mais eficaz mesmo quando a enzima encontra-se no estado oxidado. O objetivo do presente trabalho foi caracterizar funcionalmente o relaxamento induzido pelo BAY 60-2770 em artéria pulmonar isolada de coelho. O BAY 60-2770 (0,0001-100 ?M) relaxou de maneira potente (10,1 ± 0.04) e eficaz (105 ± 0,9 %) a artéria pulmonar, sendo este efeito significativamente potencializado na presença dos inibidores da GCs (ODQ, 10 ?M, 4,9 vezes), da fosfodiesterase tipo 5 (tadalafil, 100 ?M, 5,6 vezes) ou da sintase de óxido nítrico (LNAME, 100 ?M, 3,0 vezes). A presença do sequestrador de NO, do doador de NO, da indometacina, do bloqueador do canal de potássio ou a remoção endotelial não interferiram no relaxamento induzido pelo BAY 60-2770. A fenilefrina (0,00001-3 mM) e a estimulação elétrica (4-16 Hz) produziram contração dependente da concentração e frequência, respectivamente. Na presença de tetrodotoxina (TTX, 1 ?M) e fentolamina (1 ?M) houve abolição da resposta contrátil a estimulação elétrica, mostrando a liberação neurogênica de catecolamina. Na presença de BAY 60-2770 co-incubado com ODQ uma redução significativa na contração induzida pela estimulação elétrica foi observada. Apesar desta mesma redução ter sido observada na presença do L-NAME, a mesma não foi estatisticamente significante em comparação aos anéis incubados somente com BAY 60-2770 (1 ?M). Nossos resultados mostraram que a oxidação do grupamento heme, a inibição da fosfodiesterase e a ausência do NO favoreceram a resposta relaxante do BAY 60-2770 Abstract: Soluble guanylate cyclase (sGC) stimulators and activators have been developed for use in pathophysiological condition when NO formation or bioavailability are impaired or when NO tolerance gas developed. Soluble guanylate cyclase is a heterodimer enzyme composed by alpha (?) and beta (?) subunits and a prostetic heme group. Soluble guanylate cyclase converts guanosine triphosphate (GTP) into cyclic guanosine monophosphate (GMPc) after nitric oxide (NO) activaton. Under pathophysiological conditions heme can be oxidized (Fe3+), thus reduzing NO efficacy. The main difference between stimulators and activators (BAY 58-2667, BAY 60-2770 and HMR 1766) is that the latter class of drugs is more efficacious when heme is oxidized. The aim of the present study is to characterize the relaxation induced by BAY 60-2770 in isolated pulmonary artery from rabbit. BAY 60-2770 (0.0001-100 ?M) produced concentration dependent relaxation with potency and maxima response values of 10,1 ± 0.04 and 105 ± 0.9%, respectively. The inhibition of sGC (ODQ, 10 ?M) or phosphodiesterase type 5 (tadalafil, 100 ?M) or the nitric oxide synthase (L-NAME, 100 ?M) produced significantly leftward shifts by, approximately, 4.9, 5.4 and 3.0, respectively. The NO-scavenger, the NO-donor, the cyclooxygenase inhibition, the potassium channel blocker or endothelial removal did not interfere on the pharmacological parameters of BAY 60-2770. Phenylephrine (PE, 0.0001- 3 mM) and electrical field stimulation (EFS, 4-16 Hz) induced concentration and frequency dependent-contraction, respectively. Phentolamine (1 ?M) and tetrodotoxin (TTX, 1 ??) practically abolished EFS-induced contraction, showing the neurogenic source of catecholamines. Co-treatment with BAY 60-2770 with ODQ reduced significantly the EFS-induced contraction in comparison with BAY 60- 2770 (1 ?M) alone. Although we have observed a tendency of reduction in the amplitude of contraction when BAY 60-2770 was co-incubated with L-NAME, it was not statistically significant. Therefore, our results showed that the oxidation of heme group, the inhibition of phosphodiesterase and lower levels of NO favoured the relaxing response of BAY 60- 2770 in isolated rabbit pulmonary artery Mestrado Farmacologia Mestre em Farmacologia
- Published
- 2021
23. Structural Insights into Retinal Guanylate Cyclase Activator Proteins (GCAPs)
- Author
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James B. Ames
- Subjects
Models, Molecular ,genetic structures ,Protein Conformation ,Review ,retinal guanylate cyclase ,chemistry.chemical_compound ,Models ,GCAP5 ,Biology (General) ,Protein Dimerization ,Zebrafish ,Spectroscopy ,biology ,Chemistry ,General Medicine ,Computer Science Applications ,Cell biology ,Hydrophobic and Hydrophilic Interactions ,Visual phototransduction ,Light Signal Transduction ,QH301-705.5 ,Iron ,phototransduction ,DNA-binding protein ,Catalysis ,Inorganic Chemistry ,Genetics ,Animals ,Physical and Theoretical Chemistry ,Molecular Biology ,QD1-999 ,Eye Disease and Disorders of Vision ,calcium ,Chemical Physics ,Activator (genetics) ,Organic Chemistry ,Neurosciences ,Molecular ,GCAP2 ,Retinal ,Zebrafish Proteins ,GCAP1 ,biology.organism_classification ,Guanylate Cyclase-Activating Proteins ,Cytosol ,sense organs ,Protein Multimerization ,Other Biological Sciences ,Other Chemical Sciences ,Cyclase activity - Abstract
Retinal guanylate cyclases (RetGCs) promote the Ca2+-dependent synthesis of cGMP that coordinates the recovery phase of visual phototransduction in retinal rods and cones. The Ca2+-sensitive activation of RetGCs is controlled by a family of photoreceptor Ca2+ binding proteins known as guanylate cyclase activator proteins (GCAPs). The Mg2+-bound/Ca2+-free GCAPs bind to RetGCs and activate cGMP synthesis (cyclase activity) at low cytosolic Ca2+ levels in light-activated photoreceptors. By contrast, Ca2+-bound GCAPs bind to RetGCs and inactivate cyclase activity at high cytosolic Ca2+ levels found in dark-adapted photoreceptors. Mutations in both RetGCs and GCAPs that disrupt the Ca2+-dependent cyclase activity are genetically linked to various retinal diseases known as cone-rod dystrophies. In this review, I will provide an overview of the known atomic-level structures of various GCAP proteins to understand how protein dimerization and Ca2+-dependent conformational changes in GCAPs control the cyclase activity of RetGCs. This review will also summarize recent structural studies on a GCAP homolog from zebrafish (GCAP5) that binds to Fe2+ and may serve as a Fe2+ sensor in photoreceptors. The GCAP structures reveal an exposed hydrophobic surface that controls both GCAP1 dimerization and RetGC binding. This exposed site could be targeted by therapeutics designed to inhibit the GCAP1 disease mutants, which may serve to mitigate the onset of retinal cone-rod dystrophies.
- Published
- 2021
24. Impaired Ca2+ Sensitivity of a Novel GCAP1 Variant Causes Cone Dystrophy and Leads to Abnormal Synaptic Transmission Between Photoreceptors and Bipolar Cells
- Author
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Paolo Enrico Maltese, Benedetto Falsini, Valerio Marino, Elisa De Siena, Giuditta Dal Cortivo, Giorgio Placidi, Matteo Bertelli, and Daniele Dell'Orco
- Subjects
0301 basic medicine ,Retinal degeneration ,Abnormal electroretinogram ,Abnormal synaptic transmission ,Retinal Pigment Epithelium ,calcium binding proteins ,lcsh:Chemistry ,0302 clinical medicine ,Cone dystrophy ,Retinal Rod Photoreceptor Cells ,lcsh:QH301-705.5 ,Spectroscopy ,Protein Stability ,Chemistry ,Settore MED/30 - MALATTIE APPARATO VISIVO ,photoreceptors ,General Medicine ,Middle Aged ,Photoreceptor outer segment ,Computer Science Applications ,Cell biology ,guanylate cyclase ,Phenotype ,Second messenger system ,Disease Progression ,Female ,Hydrophobic and Hydrophilic Interactions ,Tomography, Optical Coherence ,Visual phototransduction ,bipolar cells ,Heterozygote ,Retinal Bipolar Cells ,Fundus Oculi ,GUCA1A ,phototransduction ,Molecular Dynamics Simulation ,Neurotransmission ,Article ,Catalysis ,Inorganic Chemistry ,Protein Aggregates ,03 medical and health sciences ,Cations ,Electroretinography ,medicine ,neuronal calcium sensor ,Humans ,synaptic transmission ,Physical and Theoretical Chemistry ,Protein Structure, Quaternary ,Molecular Biology ,cone dystrophy ,Organic Chemistry ,medicine.disease ,Guanylate Cyclase-Activating Proteins ,030104 developmental biology ,lcsh:Biology (General) ,lcsh:QD1-999 ,Mutation ,Hydrodynamics ,030221 ophthalmology & optometry ,retinal degeneration ,Calcium ,Atrophy - Abstract
Guanylate cyclase-activating protein 1 (GCAP1) is involved in the shutdown of the phototransduction cascade by regulating the enzymatic activity of retinal guanylate cyclase via a Ca2+/cGMP negative feedback. While the phototransduction-associated role of GCAP1 in the photoreceptor outer segment is widely established, its implication in synaptic transmission to downstream neurons remains to be clarified. Here, we present clinical and biochemical data on a novel isolate GCAP1 variant leading to a double amino acid substitution (p.N104K and p.G105R) and associated with cone dystrophy (COD) with an unusual phenotype. Severe alterations of the electroretinogram were observed under both scotopic and photopic conditions, with a negative pattern and abnormally attenuated b-wave component. The biochemical and biophysical analysis of the heterologously expressed N104K-G105R variant corroborated by molecular dynamics simulations highlighted a severely compromised Ca2+-sensitivity, accompanied by minor structural and stability alterations. Such differences reflected on the dysregulation of both guanylate cyclase isoforms (RetGC1 and RetGC2), resulting in the constitutive activation of both enzymes at physiological levels of Ca2+. As observed with other GCAP1-associated COD, perturbation of the homeostasis of Ca2+ and cGMP may lead to the toxic accumulation of second messengers, ultimately triggering cell death. However, the abnormal electroretinogram recorded in this patient also suggested that the dysregulation of the GCAP1–cyclase complex further propagates to the synaptic terminal, thereby altering the ON-pathway related to the b-wave generation. In conclusion, the pathological phenotype may rise from a combination of second messengers’ accumulation and dysfunctional synaptic communication with bipolar cells, whose molecular mechanisms remain to be clarified.
- Published
- 2021
25. Functional modulation of phosphodiesterase-6 by calcium in mouse rod photoreceptors
- Author
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Teemu Turunen, Ari Koskelainen, Department of Neuroscience and Biomedical Engineering, Aalto-yliopisto, and Aalto University
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Male ,Mice, Knockout ,Cyclic Nucleotide Phosphodiesterases, Type 6 ,genetic structures ,Science ,Molecular neuroscience ,Guanylate Cyclase-Activating Proteins ,Article ,Cellular neuroscience ,Retina ,Mice ,Retinal Rod Photoreceptor Cells ,Medicine ,Animals ,Calcium ,Female ,sense organs ,Calcium Signaling ,Cyclic GMP - Abstract
Copyright: This record is sourced from MEDLINE/PubMed, a database of the U.S. National Library of Medicine Phosphodiesterase-6 (PDE6) is a key protein in the G-protein cascade converting photon information to bioelectrical signals in vertebrate photoreceptor cells. Here, we demonstrate that PDE6 is regulated by calcium, contrary to the common view that PDE1 is the unique PDE class whose activity is modulated by intracellular Ca2+. To broaden the operating range of photoreceptors, mammalian rod photoresponse recovery is accelerated mainly by two calcium sensor proteins: recoverin, modulating the lifetime of activated rhodopsin, and guanylate cyclase-activating proteins (GCAPs), regulating the cGMP synthesis. We found that decreasing rod intracellular Ca2+ concentration accelerates the flash response recovery and increases the basal PDE6 activity (βdark) maximally by ~ 30% when recording local electroretinography across the rod outer segment layer from GCAPs-/- recoverin-/- mice. Our modeling shows that a similar elevation in βdark can fully explain the observed acceleration of flash response recovery in low Ca2+. Additionally, a reduction of the free Ca2+ in GCAPs-/- recoverin-/- rods shifted the inhibition constants of competitive PDE inhibitor 3-isobutyl-1-methylxanthine (IBMX) against the thermally activated and light-activated forms of PDE6 to opposite directions, indicating a complex interaction between IBMX, PDE6, and calcium. The discovered regulation of PDE6 is a previously unknown mechanism in the Ca2+-mediated modulation of rod light sensitivity.
- Published
- 2021
26. Retinal degeneration-3 protein promotes photoreceptor survival by suppressing activation of guanylyl cyclase rather than accelerating GMP recycling
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Elena V. Olshevskaya, Igor V. Peshenko, and Alexander M. Dizhoor
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0301 basic medicine ,Retinal degeneration ,Male ,PEI, polyethylenimine ,GTP' ,genetic structures ,Guanosine Monophosphate ,Biochemistry ,chemistry.chemical_compound ,Mice ,Retinal Rod Photoreceptor Cells ,Mice, Knockout ,medicine.diagnostic_test ,GMP ,Retinal Degeneration ,Phosphodiesterase ,Nuclear Proteins ,GCAP, guanylyl cyclase activating protein ,Cell biology ,medicine.anatomical_structure ,calcium-binding proteins ,Phosphorylation ,Female ,Signal transduction ,RD3 ,congenital blindness ,signal transduction ,Photoreceptor Cells, Vertebrate ,Protein Binding ,Research Article ,vision ,RD3, retinal degeneration 3 protein ,Mutation, Missense ,Mice, Transgenic ,LCA12, Leber’s congenital amaurosis-12 ,Retina ,03 medical and health sciences ,cyclic GMP ,RetGC ,medicine ,Animals ,Humans ,guanylate cyclase (guanylyl cyclase) ,Molecular Biology ,PDE6, cGMP phosphodiesterase 6 ,ERG, electroretinography ,030102 biochemistry & molecular biology ,GCAP ,Retinal ,Cell Biology ,medicine.disease ,photoreceptor ,eye diseases ,Guanylate Cyclase-Activating Proteins ,Mice, Inbred C57BL ,030104 developmental biology ,chemistry ,Amino Acid Substitution ,Guanylate Cyclase ,RetGC, retinal membrane guanylyl cyclase ,Calcium ,sense organs ,Electroretinography - Abstract
Retinal degeneration-3 protein (RD3) deficiency causes photoreceptor dysfunction and rapid degeneration in the rd3 mouse strain and in human Leber's congenital amaurosis, a congenital retinal dystrophy that results in early vision loss. However, the mechanisms responsible for photoreceptor death remain unclear. Here, we tested two hypothesized biochemical events that may underlie photoreceptor death: (i) the failure to prevent aberrant activation of retinal guanylyl cyclase (RetGC) by calcium-sensor proteins (GCAPs) versus (ii) the reduction of GMP phosphorylation rate, preventing its recycling to GDP/GTP. We found that GMP converts to GDP/GTP in the photoreceptor fraction of the retina ∼24-fold faster in WT mice and ∼400-fold faster in rd3 mice than GTP conversion to cGMP by RetGC. Adding purified RD3 to the retinal extracts inhibited RetGC 4-fold but did not affect GMP phosphorylation in wildtype or rd3 retinas. RD3-deficient photoreceptors rapidly degenerated in rd3 mice that were reared in constant darkness to prevent light-activated GTP consumption via RetGC and phosphodiesterase 6. In contrast, rd3 degeneration was alleviated by deletion of GCAPs. After 2.5 months, only ∼40% of photoreceptors remained in rd3/rd3 retinas. Deletion of GCAP1 or GCAP2 alone preserved 68% and 57% of photoreceptors, respectively, whereas deletion of GCAP1 and GCAP2 together preserved 86%. Taken together, our in vitro and in vivo results support the hypothesis that RD3 prevents photoreceptor death primarily by suppressing activation of RetGC by both GCAP1 and GCAP2 but do not support the hypothesis that RD3 plays a significant role in GMP recycling.
- Published
- 2020
27. Missense mutations affecting Ca
- Author
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Giuditta, Dal Cortivo, Valerio, Marino, Francesco, Bonì, Mario, Milani, and Daniele, Dell'Orco
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Protein Stability ,Mutation, Missense ,Temperature ,Molecular Dynamics Simulation ,Dynamic Light Scattering ,Guanylate Cyclase-Activating Proteins ,Kinetics ,Protein Aggregates ,X-Ray Diffraction ,Scattering, Small Angle ,Humans ,Point Mutation ,Calcium ,Mutant Proteins ,Protein Multimerization ,Hydrophobic and Hydrophilic Interactions ,Cone-Rod Dystrophies - Abstract
Guanylate cyclase activating protein 1 (GCAP1) is a neuronal calcium sensor (NCS) involved in the early biochemical steps underlying the phototransduction cascade. By switching from a Ca
- Published
- 2020
28. Role of GUCA1C in Primary Congenital Glaucoma and in the Retina: Functional Evaluation in Zebrafish
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Juan-Manuel Bonet-Fernández, Raquel Atienzar-Aroca, Julian Garcia-Feijoo, Susana Alexandre-Moreno, Carmen-Dora Méndez, Julio Escribano, Samuel Morales-Cámara, Jesús-José Ferre-Fernández, Miguel Coca-Prados, Laura Morales, José-María Martínez-de-la-Casa, José-Daniel Aroca-Aguilar, Laura Fernández-Sánchez, Nicolás Cuenca, Universidad de Alicante. Departamento de Óptica, Farmacología y Anatomía, Universidad de Alicante. Departamento de Fisiología, Genética y Microbiología, and Neurobiología del Sistema Visual y Terapia de Enfermedades Neurodegenerativas (NEUROVIS)
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0301 basic medicine ,Male ,Exome sequencing ,Candidate gene ,genetic structures ,Apoptosis ,Gene Knockout Techniques ,0302 clinical medicine ,genetics ,Gliosis ,Zebrafish ,Genetics (clinical) ,Gene Editing ,Glial fibrillary acidic protein ,biology ,Reverse Transcriptase Polymerase Chain Reaction ,High-Throughput Nucleotide Sequencing ,Middle Aged ,Cell biology ,Pedigree ,medicine.anatomical_structure ,Retinal ganglion cell ,030220 oncology & carcinogenesis ,Oftalmología ,Female ,primary congenital glaucoma ,medicine.symptom ,Visual phototransduction ,Adult ,lcsh:QH426-470 ,Protein family ,Farmacología ,macromolecular substances ,GUCA1C ,Biología Celular ,Article ,Retina ,03 medical and health sciences ,Genetics ,medicine ,Animals ,Humans ,Amino Acid Sequence ,CRISPR/Cas9 ,Base Sequence ,Sequence Homology, Amino Acid ,Comment ,Glaucoma ,GCAP3 ,Zebrafish Proteins ,biology.organism_classification ,Anatomía ocular ,Guanylate Cyclase-Activating Proteins ,eye diseases ,Genética médica ,lcsh:Genetics ,030104 developmental biology ,biology.protein ,sense organs ,CRISPR-Cas Systems ,Primary congenital glaucoma ,exome sequencing ,Sequence Alignment - Abstract
Primary congenital glaucoma (PCG) is a heterogeneous, inherited, and severe optical neuropathy caused by apoptotic degeneration of the retinal ganglion cell layer. Whole-exome sequencing analysis of one PCG family identified two affected siblings who carried a low-frequency homozygous nonsense GUCA1C variant (c.52G >, T/p.Glu18Ter/rs143174402). This gene encodes GCAP3, a member of the guanylate cyclase activating protein family, involved in phototransduction and with a potential role in intraocular pressure regulation. Segregation analysis supported the notion that the variant was coinherited with the disease in an autosomal recessive fashion. GCAP3 was detected immunohistochemically in the adult human ocular ciliary epithelium and retina. To evaluate the ocular effect of GUCA1C loss-of-function, a guca1c knockout zebrafish line was generated by CRISPR/Cas9 genome editing. Immunohistochemistry demonstrated the presence of GCAP3 in the non-pigmented ciliary epithelium and retina of adult wild-type fishes. Knockout animals presented up-regulation of the glial fibrillary acidic protein in Mü, ller cells and evidence of retinal ganglion cell apoptosis, indicating the existence of gliosis and glaucoma-like retinal damage. In summary, our data provide evidence for the role of GUCA1C as a candidate gene in PCG and offer new insights into the function of this gene in the ocular anterior segment and the retina.
- Published
- 2020
29. GCAP neuronal calcium sensor proteins mediate photoreceptor cell death in the rd3 mouse model of LCA12 congenital blindness by involving endoplasmic reticulum stress
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Pedro de la Villa, Jordi Andilla, Josep Maria Estanyol, María José Fidalgo, Anna Plana-Bonamaisó, Ana Mendez, Santiago López-Begines, and Pablo Loza-Alvarez
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Retinal degeneration ,Cancer Research ,Time Factors ,Cell death in the nervous system ,Leber Congenital Amaurosis ,Photoreceptor cell ,Mice ,chemistry.chemical_compound ,Phosphorylation ,0303 health sciences ,Cell Death ,lcsh:Cytology ,Neurodegenerative diseases ,Retinal Degeneration ,030302 biochemistry & molecular biology ,Guanylate cyclase activity ,Nuclear Proteins ,Endoplasmic Reticulum Stress ,Retinal diseases ,Mitochondria ,Cell biology ,medicine.anatomical_structure ,Malalties de la retina ,Physiological optics ,Photoreceptor Cells, Vertebrate ,Protein Binding ,Subcellular Fractions ,Rhodopsin ,Programmed cell death ,Immunology ,Biology ,Models, Biological ,Article ,Retina ,03 medical and health sciences ,Cellular and Molecular Neuroscience ,medicine ,Animals ,lcsh:QH573-671 ,030304 developmental biology ,Activator (genetics) ,Endoplasmic reticulum ,Retinal ,Cell Biology ,medicine.disease ,Guanylate Cyclase-Activating Proteins ,Disease Models, Animal ,Òptica fisiològica ,14-3-3 Proteins ,chemistry ,Unfolded protein response ,Calcium ,sense organs ,Mitochondrial Swelling - Abstract
Loss-of-function mutations in the retinal degeneration 3 (RD3) gene cause inherited retinopathy with impaired rod and cone function and fast retinal degeneration in patients and in the natural strain of rd3 mice. The underlying physiopathology mechanisms are not well understood. We previously proposed that guanylate cyclase-activating proteins (GCAPs) might be key Ca2+-sensors mediating the physiopathology of this disorder, based on the demonstrated toxicity of GCAP2 when blocked in its Ca2+-free form at photoreceptor inner segments. We here show that the retinal degeneration in rd3 mice is substantially delayed by GCAPs ablation. While the number of retinal photoreceptor cells is halved in 6 weeks in rd3 mice, it takes 8 months to halve in rd3/rd3 GCAPs−/− mice. Although this substantial morphological rescue does not correlate with recovery of visual function due to very diminished guanylate cyclase activity in rd3 mice, it is very informative of the mechanisms underlying photoreceptor cell death. By showing that GCAP2 is mostly in its Ca2+-free-phosphorylated state in rd3 mice, we infer that the [Ca2+]i at rod inner segments is permanently low. GCAPs are therefore retained at the inner segment in their Ca2+-free, guanylate cyclase activator state. We show that in this conformational state GCAPs induce endoplasmic reticulum (ER) stress, mitochondrial swelling, and cell death. ER stress and mitochondrial swelling are early hallmarks of rd3 retinas preceding photoreceptor cell death, that are substantially rescued by GCAPs ablation. By revealing the involvement of GCAPs-induced ER stress in the physiopathology of Leber’s congenital amaurosis 12 (LCA12), this work will aid to guide novel therapies to preserve retinal integrity in LCA12 patients to expand the window for gene therapy intervention to restore vision.
- Published
- 2020
30. Constitutive Activation of Guanylate Cyclase by the G86R GCAP1 Variant Is Due to 'Locking' Cation-π Interactions that Impair the Activator-to-Inhibitor Structural Transition
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Daniele Dell'Orco, Karl-Wilhelm Koch, Seher Abbas, Valerio Marino, and Laura Bielefeld
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0301 basic medicine ,Conformational change ,Protein Conformation ,Mutant ,retinal guanylate cyclase ,lcsh:Chemistry ,chemistry.chemical_compound ,0302 clinical medicine ,Cone dystrophy ,Missense mutation ,Cone Dystrophy ,lcsh:QH301-705.5 ,Spectroscopy ,Circular Dichroism ,General Medicine ,Recombinant Proteins ,Computer Science Applications ,Thermodynamics ,Protein Binding ,Mutation, Missense ,Molecular Dynamics Simulation ,Catalysis ,Article ,cone dystrophy ,guanylate cyclase-activating protein 1 ,neuronal calcium sensor ,Inorganic Chemistry ,03 medical and health sciences ,Amino Acids, Aromatic ,Cations ,medicine ,Humans ,Physical and Theoretical Chemistry ,Molecular Biology ,Gene ,Activator (genetics) ,Organic Chemistry ,Dystrophy ,Retinal ,medicine.disease ,Dynamic Light Scattering ,Guanylate Cyclase-Activating Proteins ,030104 developmental biology ,HEK293 Cells ,lcsh:Biology (General) ,lcsh:QD1-999 ,chemistry ,Guanylate Cyclase ,Biophysics ,Calcium ,030217 neurology & neurosurgery - Abstract
Guanylate Cyclase activating protein 1 (GCAP1) mediates the Ca2+-dependent regulation of the retinal Guanylate Cyclase (GC) in photoreceptors, acting as a target inhibitor at high [Ca2+] and as an activator at low [Ca2+]. Recently, a novel missense mutation (G86R) was found in GUCA1A, the gene encoding for GCAP1, in patients diagnosed with cone-rod dystrophy. The G86R substitution was found to affect the flexibility of the hinge region connecting the N- and C-domains of GCAP1, resulting in decreased Ca2+-sensitivity and abnormally enhanced affinity for GC. Based on a structural model of GCAP1, here, we tested the hypothesis of a cation-&pi, interaction between the positively charged R86 and the aromatic W94 as the main mechanism underlying the impaired activator-to-inhibitor conformational change. W94 was mutated to F or L, thus, resulting in the double mutants G86R+W94L/F. The double mutants showed minor structural and stability changes with respect to the single G86R mutant, as well as lower affinity for both Mg2+ and Ca2+, moreover, substitutions of W94 abolished &ldquo, phase II&rdquo, in Ca2+-titrations followed by intrinsic fluorescence. Interestingly, the presence of an aromatic residue in position 94 significantly increased the aggregation propensity of Ca2+-loaded GCAP1 variants. Finally, atomistic simulations of all GCAP1 variants in the presence of Ca2+ supported the presence of two cation-&pi, interactions involving R86, which was found to act as a bridge between W94 and W21, thus, locking the hinge region in an activator-like conformation and resulting in the constitutive activation of the target under physiological conditions.
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- 2019
31. Guanylate cyclase–activating protein 2 contributes to phototransduction and light adaptation in mouse cone photoreceptors
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Vladimir J. Kefalov, Jeannie Chen, Frans Vinberg, Alexander M. Dizhoor, and Igor V. Peshenko
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0301 basic medicine ,Light Signal Transduction ,genetic structures ,G protein ,Adaptation (eye) ,Biochemistry ,Sodium-Calcium Exchanger ,03 medical and health sciences ,chemistry.chemical_compound ,Neurobiology ,Activating protein 2 ,medicine ,Animals ,Cyclic GMP ,Molecular Biology ,Mice, Knockout ,Retina ,Adaptation, Ocular ,Chemistry ,Retinal ,Cell Biology ,Photoreceptor outer segment ,Guanylate Cyclase-Activating Proteins ,Cell biology ,Mice, Inbred C57BL ,030104 developmental biology ,medicine.anatomical_structure ,Darkness ,Retinal Cone Photoreceptor Cells ,Calcium ,sense organs ,Visual phototransduction - Abstract
Light adaptation of photoreceptor cells is mediated by Ca(2+)-dependent mechanisms. In darkness, Ca(2+) influx through cGMP-gated channels into the outer segment of photoreceptors is balanced by Ca(2+) extrusion via Na(+)/Ca(2+), K(+) exchangers (NCKXs). Light activates a G protein signaling cascade, which closes cGMP-gated channels and decreases Ca(2+) levels in photoreceptor outer segment because of continuing Ca(2+) extrusion by NCKXs. Guanylate cyclase–activating proteins (GCAPs) then up-regulate cGMP synthesis by activating retinal membrane guanylate cyclases (RetGCs) in low Ca(2+). This activation of RetGC accelerates photoresponse recovery and critically contributes to light adaptation of the nighttime rod and daytime cone photoreceptors. In mouse rod photoreceptors, GCAP1 and GCAP2 both contribute to the Ca(2+)-feedback mechanism. In contrast, only GCAP1 appears to modulate RetGC activity in mouse cones because evidence of GCAP2 expression in cones is lacking. Surprisingly, we found that GCAP2 is expressed in cones and can regulate light sensitivity and response kinetics as well as light adaptation of GCAP1-deficient mouse cones. Furthermore, we show that GCAP2 promotes cGMP synthesis and cGMP-gated channel opening in mouse cones exposed to low Ca(2+). Our biochemical model and experiments indicate that GCAP2 significantly contributes to the activation of RetGC1 at low Ca(2+) when GCAP1 is not present. Of note, in WT mouse cones, GCAP1 dominates the regulation of cGMP synthesis. We conclude that, under normal physiological conditions, GCAP1 dominates the regulation of cGMP synthesis in mouse cones, but if its function becomes compromised, GCAP2 contributes to the regulation of phototransduction and light adaptation of cones.
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- 2018
32. GUCY2D Cone–Rod Dystrophy-6 Is a 'Phototransduction Disease' Triggered by Abnormal Calcium Feedback on Retinal Membrane Guanylyl Cyclase 1
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Shinya Sato, Elena V. Olshevskaya, Alexander M. Dizhoor, Vladimir J. Kefalov, and Igor V. Peshenko
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0301 basic medicine ,Retinal degeneration ,genetic structures ,Mice, Transgenic ,Receptors, Cell Surface ,Cyclase ,Retina ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,Retinal Rod Photoreceptor Cells ,Retinitis pigmentosa ,medicine ,Animals ,Humans ,Vision, Ocular ,Research Articles ,General Neuroscience ,Retinal Degeneration ,Dystrophy ,Retinal ,medicine.disease ,Guanylate Cyclase-Activating Proteins ,Cell biology ,030104 developmental biology ,chemistry ,Guanylate Cyclase ,GUCY2D ,Calcium ,sense organs ,Retinitis Pigmentosa ,Visual phototransduction - Abstract
The Arg838Ser mutation in retinal membrane guanylyl cyclase 1 (RetGC1) has been linked to autosomal dominant cone–rod dystrophy type 6 (CORD6). It is believed that photoreceptor degeneration is caused by the altered sensitivity of RetGC1 to calcium regulation via guanylyl cyclase activating proteins (GCAPs). To determine the mechanism by which this mutation leads to degeneration, we investigated the structure and function of rod photoreceptors in two transgenic mouse lines, 362 and 379, expressing R838S RetGC1. In both lines, rod outer segments became shorter than in their nontransgenic siblings by 3–4 weeks of age, before the eventual photoreceptor degeneration. Despite the shortening of their outer segments, the dark current of transgenic rods was 1.5–2.2-fold higher than in nontransgenic controls. Similarly, the dim flash response amplitude inR838S+rods was larger, time to peak was delayed, and flash sensitivity was increased, all suggesting elevated dark-adapted free cGMP in transgenic rods. In rods expressing R838S RetGC1, dark-current noise increased and the exchange current, detected after a saturating flash, became more pronounced. These results suggest disrupted Ca2+phototransduction feedback and abnormally high free-Ca2+concentration in the outer segments. Notably, photoreceptor degeneration, which typically occurred after 3 months of age in R838S RetGC1 transgenic mice inGCAP1,2+/+orGCAP1,2+/−backgrounds, was prevented inGCAP1,2−/−mice lacking Ca2+feedback to guanylyl cyclase. In summary, the dysregulation of guanylyl cyclase in RetGC1-linked CORD6 is a “phototransduction disease,” which means it is associated with increased free-cGMP and Ca2+levels in photoreceptors.SIGNIFICANCE STATEMENTIn a mouse model expressing human membrane guanylyl cyclase 1 (RetGC1,GUCY2D), a mutation associated with early progressing congenital blindness, cone–rod dystrophy type 6 (CORD6), deregulates calcium-sensitive feedback of phototransduction to the cyclase mediated by guanylyl cyclase activating proteins (GCAPs), which are calcium-sensor proteins. The abnormal calcium sensitivity of the cyclase increases cGMP-gated dark current in the rod outer segments, reshapes rod photoresponses, and triggers photoreceptor death. This work is the first to demonstrate a direct physiological effect ofGUCY2DCORD6-linked mutation on photoreceptor physiologyin vivo. It also identifies the abnormal regulation of the cyclase by calcium-sensor proteins as the main trigger for the photoreceptor death.
- Published
- 2018
33. CO2/bicarbonate modulates cone photoreceptor ROS-GC1 and restores its CORD6-linked catalytic activity
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Teresa Duda, Rameshwar K. Sharma, and Alexander Pertzev
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0301 basic medicine ,genetic structures ,Carbonic anhydrase II ,Bicarbonate ,Clinical Biochemistry ,Receptors, Cell Surface ,Carbonic Anhydrase II ,Retinal Cone Photoreceptor Cells ,Article ,Catalysis ,03 medical and health sciences ,chemistry.chemical_compound ,Retinal Rod Photoreceptor Cells ,Carbonic anhydrase ,Chlorocebus aethiops ,Animals ,Cyclic GMP ,Molecular Biology ,COS cells ,030102 biochemistry & molecular biology ,biology ,Chemistry ,Cell Biology ,General Medicine ,Carbon Dioxide ,Guanylate Cyclase-Activating Proteins ,Guanylate Cyclase ,COS Cells ,Second messenger system ,biology.protein ,Biophysics ,Cattle ,sense organs ,Cone-Rod Dystrophies ,Visual phototransduction - Abstract
This study with recombinant reconstituted system mimicking the cellular conditions of the native cones, documents that photoreceptor ROS-GC1 is modulated by gaseous CO(2). Mechanistically, CO(2) is sensed by carbonic anhydrase (CAII), generates bicarbonate that, in turn, directly targets the core catalytic domain of ROS-GC1 and activates it to increased synthesis of cyclic GMP. This, then, functions as a second messenger for the cone phototransduction. The study demonstrates that, in contrast to the Ca(2+)−modulated phototransduction, the CO(2) pathway is Ca(2+)−independent, yet is linked with it and synergizes it. It, through R(787)C mutation in the third heptad of the signal helix domain of ROS-GC1, affects cone rod dystrophy, CORD6. CORD6 is caused firstly by lowered basal and GCAP1-dependent ROS-GC1 activity and secondly, by a shift in Ca(2+) sensitivity of the ROS-GC1/GCAP1 complex that remains active in darkness. Remarkably, the first but not the second defect disappears with bicarbonate thus explaining the basis for CORD6 pathological severity. Because cones, but not rods, express CAII, the excessive synthesis of cyclic GMP would be most acute in cones.
- Published
- 2018
34. Cone dystrophy or macular dystrophy associated with novel autosomal dominant GUCA1A mutations
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Manes, Gaël, Mamouni, Sonia, Hérald, Emilie, Richard, Anne-Claire, Sénéchal, Audrey, Aouad, Karim, Bocquet, Béatrice, Meunier, Isabelle, and Hamel, Christian P.
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Adult ,Male ,genetic structures ,DNA Mutational Analysis ,Mutation, Missense ,Visual Acuity ,Macular Degeneration ,Young Adult ,Electroretinography ,Humans ,Child ,Genes, Dominant ,Sequence Deletion ,Optical Imaging ,Retinal Degeneration ,Middle Aged ,eye diseases ,Guanylate Cyclase-Activating Proteins ,Pedigree ,Retinal Cone Photoreceptor Cells ,Female ,sense organs ,Visual Fields ,Cone-Rod Dystrophies ,Tomography, Optical Coherence ,Research Article - Abstract
Purpose Sixteen different mutations in the guanylate cyclase activator 1A gene (GUCA1A), have been previously identified to cause autosomal dominant cone dystrophy (adCOD), cone–rod dystrophy (adCORD), macular dystrophy (adMD), and in an isolated patient, retinitis pigmentosa (RP). The purpose of this study is to report on two novel mutations and the patients’ clinical features. Methods Clinical investigations included visual acuity and visual field testing, fundus examination, high-resolution spectral-domain optical coherence tomography (OCT), fundus autofluorescence imaging, and full-field and multifocal electroretinogram (ERG) recordings. GUCA1A was screened by Sanger sequencing in a cohort of 12 French families with adCOD, adCORD, and adMD. Results We found two novel GUCA1A mutations—one amino acid deletion, c.302_304delTAG (p.Val101del), and one missense mutation, c.444T>A (p.Asp148Glu)—each of which was found in one family. The p.Asp148Glu mutation affected one of the Ca2+-binding amino acids of the EF4 hand, while the p.Val101del mutation resulted in the in-frame deletion of Valine-101, localized between two Ca2+-binding aspartic acid residues at positions 100 and 102 of the EF3 hand. Both families complained of visual acuity loss worsening with age. However, the p.Asp148Glu mutation was present in one family with adCOD involving abnormal cone function and an absence of macular atrophy, whereas p.Val101del mutation was encountered in another family with adMD without a generalized cone defect. Conclusions The two novel mutations described in this study are associated with distinct phenotypes, MD for p.Val101del and COD for p.Asp148Glu, with no intrafamilial phenotypic heterogeneity.
- Published
- 2017
35. GUCA1A mutation causes maculopathy in a five-generation family with a wide spectrum of severity
- Author
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Xue Chen, Xinyuan Pan, Chen Zhao, Xiantao Sun, Xunlun Sheng, Qingshun Zhao, Wen-Juan Zhuang, Guohua Liu, Yingjie Li, Yan Mei, Guofu Huang, Xun Shi, Biao Yan, Zili Li, and Yani Liu
- Subjects
0301 basic medicine ,Adult ,Male ,medical genetics ,Genetic Linkage ,GUCA1A ,030105 genetics & heredity ,medicine.disease_cause ,maculopathy ,03 medical and health sciences ,chemistry.chemical_compound ,Cone dystrophy ,Genetic linkage ,Exome Sequencing ,medicine ,Animals ,Humans ,Original Research Article ,Zebrafish ,Genetics (clinical) ,Exome sequencing ,Genetics ,Family Health ,Mutation ,Retinal pigment epithelium ,biology ,Retinal Degeneration ,Retinal ,pathogenic mechanism ,biology.organism_classification ,medicine.disease ,Guanylate Cyclase-Activating Proteins ,Pedigree ,ophthalmology ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,Maculopathy ,Female ,sense organs - Abstract
Purpose: The aim of this study was to investigate the genetic basis and pathogenic mechanism of variable maculopathies, ranging from mild photoreceptor degeneration to central areolar choroidal dystrophy, in a five-generation family. Methods: Clinical characterizations, whole-exome sequencing, and genome-wide linkage analysis were carried out on the family. Zebrafish models were used to investigate the pathogenesis of GUCA1A mutations. Results: A novel mutation, GUCA1A p.R120L, was identified in the family and predicted to alter the tertiary structure of guanylyl cyclase-activating protein 1, a photoreceptor-expressed protein encoded by the GUCA1A gene. The mutation was shown in zebrafish to cause significant disruptions in photoreceptors and retinal pigment epithelium, together with atrophies of retinal vessels and choriocapillaris. Those phenotypes could not be fully rescued by exogenous wild-type GUCA1A, suggesting a likely gain-of-function mechanism for p.R120L. GUCA1A p.D100E, another mutation previously implicated in cone dystrophy, also impaired the retinal pigment epithelium and photoreceptors in zebrafish, but probably via a dominant negative effect. Conclusion: We conclude that GUCA1A mutations could cause significant variability in maculopathies, including central areolar choroidal dystrophy, which represents a severe pattern of maculopathy. The diverse pathogenic modes of GUCA1A mutations may explain the phenotypic diversities. Genet Med advance online publication 26 January 2017
- Published
- 2017
36. Diversity of Guanylate Cyclase-Activating Proteins (GCAPs) in Teleost Fish: Characterization of Three Novel GCAPs (GCAP4, GCAP5, GCAP7) from Zebrafish (Danio rerio) and Prediction of Eight GCAPs (GCAP1-8) in Pufferfish (Fugu rubripes).
- Author
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Imanishi, Yoshikazu, Yang, Lili, Sokal, Izabela, Filipek, Slawomir, Palczewski, Krzysztof, and Baehr, Wolfgang
- Subjects
- *
GUANYLATE cyclase , *CALMODULIN , *CARRIER proteins , *PROTEIN binding , *GENE expression , *ZEBRA danio , *FISHES , *HUMAN genome - Abstract
The guanylate cyclase-activating proteins (GCAPs) are Ca2+-binding proteins of the calmodulin (CaM) gene superfamily that function in the regulation of photoreceptor guanylate cyclases (GCs). In the mammalian retina, two GCAPs (GCAP 1-2) and two transmembrane GCs have been identified as part of a complex regulatory system responsive to fluctuating levels of free Ca2+. A third GCAP, GCAP3, is expressed in human and zebrafish (Danio rerio) retinas, and a guanylate cyclase-inhibitory protein (GCIP) has been shown to be present in frog cones. To explore the diversity of GCAPs in more detail, we searched the pufferfish (Fugu rubripes) and zebrafish (Danio rerio) genomes for GCAP-related gene sequences (fuGCAPs and zGCAPs, respectively) and found that at least five additional GCAPs (GCAP4-8) are predicted to be present in these species. We identified genomic contigs encoding fuGCAPl-8, fuGCIP, zGCAPl-5, zGCAP7 and zGCIP. We describe cloning, expression and localization of three novel GCAPs present in the zebrafish retina (zGCAP4, zGCAP5, and zGCAP7). The results show that recombinant zGCAP4 stimulated bovine rod outer segment GC in a Ca2+-dependent manner. RT-PCR with zGCAP specific primers showed specific expression of zGCAPs and zGCIP in the retina, while zGCAPl mRNA is also present in the brain.In situhybridization with anti-sense zGCAP4, zGCAP5 and zGCAP7 RNA showed exclusive expression in zebrafish cone photoreceptors. The presence of at least eight GCAP genes suggests an unexpected diversity within this subfamily of Ca2+-binding proteins in the teleost retina, and suggests additional functions for GCAPs apart from stimulation of GC. Based on genome searches and EST analyses, the mouse and human genomes do not harbor GCAP4-8 or GCIP genes. [ABSTRACT FROM AUTHOR]
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- 2004
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37. Characterization of GUCA1A-associated dominant cone/cone-rod dystrophy: low prevalence among Japanese patients with inherited retinal dystrophies
- Author
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Tomokazu Matsuura, Hiroko Terasaki, Kazutoshi Yoshitake, Shigeki Machida, Kaoru Fujinami, Kazushige Tsunoda, Kei Shinoda, Kei Mizobuchi, Shinji Ueno, Mineo Kondo, Tadashi Nakano, Takeshi Iwata, Kazuki Kuniyoshi, Satoshi Katagiri, Takaaki Hayashi, and Lizhu Yang
- Subjects
0301 basic medicine ,Male ,Pathology ,DNA Mutational Analysis ,Inheritance Patterns ,lcsh:Medicine ,Gene Expression ,chemistry.chemical_compound ,0302 clinical medicine ,Cone dystrophy ,Japan ,Prevalence ,Cone Dystrophy ,Age of Onset ,Fluorescein Angiography ,lcsh:Science ,Exome sequencing ,Genes, Dominant ,Progressive retinal atrophy ,Multidisciplinary ,medicine.diagnostic_test ,Middle Aged ,Pedigree ,Female ,Retinal Dystrophies ,Adult ,medicine.medical_specialty ,Cord ,Adolescent ,Retina ,Article ,03 medical and health sciences ,medicine ,Electroretinography ,Humans ,Amino Acid Sequence ,Aged ,Gene amplification ,Polymorphism, Genetic ,business.industry ,lcsh:R ,Dystrophy ,Retinal ,Hereditary eye disease ,medicine.disease ,Guanylate Cyclase-Activating Proteins ,030104 developmental biology ,chemistry ,030221 ophthalmology & optometry ,lcsh:Q ,business ,Sequence Alignment ,Cone-Rod Dystrophies - Abstract
GUCA1A gene variants are associated with autosomal dominant (AD) cone dystrophy (COD) and cone-rod dystrophy (CORD). GUCA1A-associated AD-COD/CORD has never been reported in the Japanese population. The purpose of this study was to investigate clinical and genetic features of GUCA1A-associated AD-COD/CORD from a large Japanese cohort. We identified 8 variants [c.C50_80del (p.E17VfsX22), c.T124A (p.F42I), c.C204G (p.D68E), c.C238A (p.L80I), c.T295A (p.Y99N), c.A296C (p.Y99S), c.C451T (p.L151F), and c.A551G (p.Q184R)] in 14 families from our whole exome sequencing database composed of 1385 patients with inherited retinal diseases (IRDs) from 1192 families. Three variants (p.Y99N, p.Y99S, and p.L151F), which are located on/around EF-hand domains 3 and 4, were confirmed as “pathogenic”, whereas the other five variants, which did not co-segregate with IRDs, were considered “non-pathogenic”. Ophthalmic findings of 9 patients from 3 families with the pathogenic variants showed central visual impairment from early to middle-age onset and progressive macular atrophy. Electroretinography revealed severely decreased or non-recordable cone responses, whereas rod responses were highly variable, ranging from nearly normal to non-recordable. Our results indicate that the three pathogenic variants, two of which were novel, underlie AD-COD/CORD with progressive retinal atrophy, and the prevalence (0.25%, 3/1192 families) of GUCA1A-associated IRDs may be low among Japanese patients.
- Published
- 2019
38. Retinal guanylyl cyclase activation by calcium sensor proteins mediates photoreceptor degeneration in an
- Author
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Alexander M, Dizhoor, Elena V, Olshevskaya, and Igor V, Peshenko
- Subjects
Male ,genetic structures ,Mutation, Missense ,Mice, Transgenic ,Receptors, Cell Surface ,Blindness ,Retina ,Mice ,Neurobiology ,Retinal Rod Photoreceptor Cells ,Animals ,Humans ,Eye Abnormalities ,Retinal Degeneration ,Nuclear Proteins ,Guanylate Cyclase-Activating Proteins ,Mice, Inbred C57BL ,Disease Models, Animal ,Amino Acid Substitution ,Guanylate Cyclase ,Calcium ,Female ,sense organs ,Receptors, Calcium-Sensing ,Photoreceptor Cells, Vertebrate ,Protein Binding - Abstract
Deficiency of RD3 (retinal degeneration 3) protein causes recessive blindness and photoreceptor degeneration in humans and in the rd3 mouse strain, but the disease mechanism is unclear. Here, we present evidence that RD3 protects photoreceptors from degeneration by competing with guanylyl cyclase-activating proteins (GCAPs), which are calcium sensor proteins for retinal membrane guanylyl cyclase (RetGC). RetGC activity in rd3/rd3 retinas was drastically reduced but stimulated by the endogenous GCAPs at low Ca(2+) concentrations. RetGC activity completely failed to accelerate in rd3/rd3GCAPs(−/−) hybrid photoreceptors, whose photoresponses remained drastically suppressed compared with the WT. However, ∼70% of the hybrid rd3/rd3GCAPs(−/−) photoreceptors survived past 6 months, in stark contrast to
- Published
- 2019
39. Chemical shift assignments of retinal guanylyl cyclase activating protein 5 (GCAP5)
- Author
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Diana Cudia and James B. Ames
- Subjects
Protein Structure ,Secondary ,genetic structures ,Nuclear Magnetic Resonance ,1.1 Normal biological development and functioning ,030303 biophysics ,Biophysics ,EF-hand ,Eye ,Biochemistry ,Protein Structure, Secondary ,Article ,Retina ,03 medical and health sciences ,chemistry.chemical_compound ,Structural Biology ,Underpinning research ,RetGC ,GCAP5 ,Animals ,Guanylyl Cyclase Activating Proteins ,Amino Acid Sequence ,Nuclear Magnetic Resonance, Biomolecular ,Zebrafish ,Eye Disease and Disorders of Vision ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,Retinal guanylyl cyclase ,biology ,Activator (genetics) ,EF hand ,Neurosciences ,Retinal ,Zebrafish Proteins ,biology.organism_classification ,Guanylate Cyclase-Activating Proteins ,Cell biology ,Enzyme ,chemistry ,Phototransduction ,sense organs ,Biochemistry and Cell Biology ,Guanylate cyclase ,Visual phototransduction ,Biomolecular ,Biotechnology - Abstract
Retinal membrane guanylyl cyclase (RetGC) in photoreceptor rod and cone cells is regulated by a family of guanylyl cyclase activating proteins (GCAP1-7). GCAP5 is expressed in zebrafish photoreceptors and promotes Ca(2+)-dependent regulation of RetGC enzymatic activity that regulates visual phototransduction. We report NMR chemical shift assignments of the Ca(2+)-free activator form of GCAP5 (BMRB no. 27705).
- Published
- 2019
40. A G86R mutation in the calcium-sensor protein GCAP1 alters regulation of retinal guanylyl cyclase and causes dominant cone-rod degeneration
- Author
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Samuel G. Jacobson, Seher Abbas, Alexander M. Dizhoor, Elena V. Olshevskaya, Artur V. Cideciyan, Alexander Scholten, Alexander Sumaroka, Igor V. Peshenko, and Karl-Wilhelm Koch
- Subjects
0301 basic medicine ,Retinal degeneration ,Models, Molecular ,Protein Conformation, alpha-Helical ,chemistry.chemical_element ,Calcium ,Biochemistry ,Cyclase ,Retina ,03 medical and health sciences ,chemistry.chemical_compound ,Retinal Rod Photoreceptor Cells ,Calcium-binding protein ,medicine ,Humans ,Molecular Biology ,030102 biochemistry & molecular biology ,Cell Death ,Retinal ,Isothermal titration calorimetry ,Cell Biology ,medicine.disease ,Guanylate Cyclase-Activating Proteins ,030104 developmental biology ,chemistry ,Guanylate Cyclase ,Mutation ,Biophysics ,Retinal Cone Photoreceptor Cells ,Intracellular ,Cone-Rod Dystrophies ,Visual phototransduction ,Signal Transduction - Abstract
The guanylyl cyclase-activating protein, GCAP1, activates photoreceptor membrane guanylyl cyclase (RetGC) in the light, when free Ca(2+) concentrations decline, and decelerates the cyclase in the dark, when Ca(2+) concentrations rise. Here, we report a novel mutation, G86R, in the GCAP1 (GUCA1A) gene in a family with a dominant retinopathy. The G86R substitution in a “hinge” region connecting EF-hand domains 2 and 3 in GCAP1 strongly interfered with its Ca(2+)-dependent activator-to-inhibitor conformational transition. The G86R-GCAP1 variant activated RetGC at low Ca(2+) concentrations with higher affinity than did the WT GCAP1, but failed to decelerate the cyclase at the Ca(2+) concentrations characteristic of dark-adapted photoreceptors. Ca(2+)-dependent increase in Trp(94) fluorescence, indicative of the GCAP1 transition to its RetGC inhibiting state, was suppressed and shifted to a higher Ca(2+) range. Conformational changes in G86R GCAP1 detectable by isothermal titration calorimetry (ITC) also became less sensitive to Ca(2+), and the dose dependence of the G86R GCAP1–RetGC1 complex inhibition by retinal degeneration 3 (RD3) protein was shifted toward higher than normal concentrations. Our results indicate that the flexibility of the hinge region between EF-hands 2 and 3 is required for placing GCAP1-regulated Ca(2+) sensitivity of the cyclase within the physiological range of intracellular Ca(2+) at the expense of reducing GCAP1 affinity for the target enzyme. The disease-linked mutation of the hinge Gly(86), leading to abnormally high affinity for the target enzyme and reduced Ca(2+) sensitivity of GCAP1, is predicted to abnormally elevate cGMP production and Ca(2+) influx in photoreceptors in the dark.
- Published
- 2019
41. Molecular properties of human guanylate cyclase–activating protein 2 (GCAP2) and its retinal dystrophy–associated variant G157R
- Author
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Valerio Marino, Karl-Wilhelm Koch, Serena Zanzoni, Anna Avesani, and Daniele Dell'Orco
- Subjects
0301 basic medicine ,Retinal degeneration ,retina ,Cation binding ,MM, molecular mass ,PDE, phosphodiesterase 6 ,Protein Conformation ,Biochemistry ,chemistry.chemical_compound ,neurodegenerative disease ,Calcium-binding protein ,Activating protein 2 ,Magnesium ,DLS, dynamic light scattering ,ITC, isothermal titration calorimetry ,Cell biology ,NCS, neuronal calcium sensor ,calcium-binding proteins ,cyclic GMP (cGMP) ,GCAP2, guanylate cyclase–activating protein 2 ,GC, guanylate cyclase ,MCR, mean count rate ,Research Article ,Visual phototransduction ,vision ,mGCAP2, myristoylated GCAP2 ,SEC, size-exclusion chromatography ,CNG, cyclic nucleotide–gated channels ,phototransduction ,GUCA1B ,Cyclase ,03 medical and health sciences ,Retinal Dystrophies ,medicine ,Humans ,guanylate cyclase (guanylyl cyclase) ,Molecular Biology ,GCAP1, guanylate cyclase–activating protein 1 ,Myristoylation ,IRD, inherited retinal degeneration ,nmGCAP2, nonmyristoylated GCAP2 ,030102 biochemistry & molecular biology ,GCAP ,ANS, anilinonaphthalene-1-sulfonic acid ,Retinal ,Cell Biology ,medicine.disease ,Guanylate Cyclase-Activating Proteins ,cGMP ,030104 developmental biology ,GCAP, guanylate cyclase–activating protein ,chemistry ,Mutation ,retinal degeneration ,Calcium ,Protein Multimerization - Abstract
In murine and bovine photoreceptors, guanylate cyclase–activating protein 2 (GCAP2) activates retinal guanylate cyclases (GCs) at low Ca2+ levels, thus contributing to the Ca2+/cGMP negative feedback on the cyclase together with its paralog guanylate cyclase–activating protein 1, which has the same function but different Ca2+ sensitivity. In humans, a GCAP2 missense mutation (G157R) has been associated with inherited retinal degeneration (IRD) via an unknown molecular mechanism. Here, we characterized the biochemical properties of human GCAP2 and the G157R variant, focusing on its dimerization and the Ca2+/Mg2+-binding processes in the presence or absence of N-terminal myristoylation. We found that human GCAP2 and its bovine/murine orthologs significantly differ in terms of oligomeric properties, cation binding, and GC regulation. Myristoylated GCAP2 endothermically binds up to 3 Mg2+ with high affinity and forms a compact dimer that may reversibly dissociate in the presence of Ca2+. Conversely, nonmyristoylated GCAP2 does not bind Mg2+ over the physiological range and remains as a monomer in the absence of Ca2+. Both myristoylated and nonmyristoylated GCAP2 bind Ca2+ with high affinity. At odds with guanylate cyclase–activating protein 1 and independently of myristoylation, human GCAP2 does not significantly activate retinal GC1 in a Ca2+-dependent fashion. The IRD-associated G157R variant is characterized by a partly misfolded, molten globule-like conformation with reduced affinity for cations and prone to form aggregates, likely mediated by hydrophobic interactions. Our findings suggest that GCAP2 might be mostly implicated in processes other than phototransduction in human photoreceptors and suggest a possible molecular mechanism for G157R-associated IRD.
- Published
- 2021
42. Modulation of guanylate cyclase activating protein 1 (GCAP1) dimeric assembly by Ca2+ or Mg2+: Hints to understand protein activity
- Author
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Valerio Marino, Alberto Barbiroli, Carlo Bidoia, Eloise Mastrangelo, Francesco Bonì, Daniele Dell'Orco, and Mario Milani
- Subjects
0301 basic medicine ,Cation binding ,multi-angle light scattering ,lcsh:QR1-502 ,Plasma protein binding ,Molecular Dynamics Simulation ,030105 genetics & heredity ,EF-hand ,Biochemistry ,lcsh:Microbiology ,Article ,Protein–protein interaction ,protein-protein interaction ,03 medical and health sciences ,Calcium-binding protein ,Humans ,Magnesium ,Molecular Biology ,quaternary assembly ,protein modeling ,EF hand ,Chemistry ,Point mutation ,size exclusion chromatography ,molecular dynamics simulations ,Guanylate Cyclase-Activating Proteins ,Dissociation constant ,030104 developmental biology ,calcium-binding proteins ,Docking (molecular) ,small-angle X-ray scattering ,protein dynamics ,Biophysics ,Calcium ,Protein Multimerization - Abstract
The guanylyl cyclase-activating protein 1, GCAP1, activates or inhibits retinal guanylyl cyclase (retGC) depending on cellular Ca2+ concentrations. Several point mutations of GCAP1 have been associated with impaired calcium sensitivity that eventually triggers progressive retinal degeneration. In this work, we demonstrate that the recombinant human protein presents a highly dynamic monomer-dimer equilibrium, whose dissociation constant is influenced by salt concentration and, more importantly, by protein binding to Ca2+ or Mg2+. Based on small-angle X-ray scattering data, protein-protein docking, and molecular dynamics simulations we propose two novel three-dimensional models of Ca2+-bound GCAP1 dimer. The different propensity of human GCAP1 to dimerize suggests structural differences induced by cation binding potentially involved in the regulation of retGC activity.
- Published
- 2020
43. A novel p.(Glu111Val) missense mutation in GUCA1A associated with cone-rod dystrophy leads to impaired calcium sensing and perturbed second messenger homeostasis in photoreceptors
- Author
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Elena Manara, Paolo Enrico Maltese, Daniele Dell'Orco, Giuditta Dal Cortivo, Matteo Bertelli, Adriano Magli, Lucia Ziccardi, Elisa Oppici, Benedetto Falsini, Valerio Marino, and Fabiana D'Esposito
- Subjects
0301 basic medicine ,Cation binding ,novel missense mutation ,Mutant ,Mutation, Missense ,GUCA1A ,Molecular Dynamics Simulation ,Biology ,Protein aggregation ,Settore MED/03 - GENETICA MEDICA ,Protein Aggregation, Pathological ,Biophysical Phenomena ,03 medical and health sciences ,chemistry.chemical_compound ,photoreceptor Guanylate Cyclases (GC) ,Molecular Biology ,Genetics ,Genetics (clinical) ,Humans ,Missense mutation ,Magnesium ,Cyclic GMP ,Cyclic guanosine monophosphate ,Settore MED/30 - MALATTIE APPARATO VISIVO ,Retinal Degeneration ,Wild type ,General Medicine ,Molecular biology ,Guanylate Cyclase-Activating Proteins ,Pedigree ,E111V GCAP1 ,030104 developmental biology ,Gene Expression Regulation ,chemistry ,Ca2+ sensing ,Second messenger system ,Retinal Cone Photoreceptor Cells ,Calcium ,Heterologous expression ,Cone-Rod Dystrophies ,Protein Binding - Abstract
Guanylate Cyclase-Activating Protein 1 (GCAP1) regulates the enzymatic activity of the photoreceptor guanylate cyclases (GC), leading to inhibition or activation of the cyclic guanosine monophosphate (cGMP) synthesis depending on its Ca2+- or Mg2+-loaded state. By genetically screening a family of patients diagnosed with cone-rod dystrophy, we identified a novel missense mutation with autosomal dominant inheritance pattern (c.332A>T; p.(Glu111Val); E111V from now on) in the GUCA1A gene coding for GCAP1. We performed a thorough biochemical and biophysical investigation of wild type (WT) and E111V human GCAP1 by heterologous expression and purification of the recombinant proteins. The E111V substitution disrupts the coordination of the Ca2+ ion in the high-affinity site (EF-hand 3, EF3), thus significantly decreasing the ability of GCAP1 to sense Ca2+ (∼80-fold higher Kdapp compared to WT). Both WT and E111V GCAP1 form dimers independently on the presence of cations, but the E111V Mg2+-bound form is prone to severe aggregation over time. Molecular dynamics simulations suggest a significantly increased flexibility of both the EF3 and EF4 cation binding loops for the Ca2+-bound form of E111V GCAP1, in line with the decreased affinity for Ca2+. In contrast, a more rigid backbone conformation is observed in the Mg2+-bound state compared to the WT, which results in higher thermal stability. Functional assays confirm that E111V GCAP1 interacts with the target GC with a similar apparent affinity (EC50); however, the mutant shifts the GC inhibition out of the physiological [Ca2+] (IC50E111V ∼10 μM), thereby leading to the aberrant constitutive synthesis of cGMP under conditions of dark-adapted photoreceptors.
- Published
- 2018
44. Functional characterization of a novel GUCA1A missense mutation (D144G) in autosomal dominant cone dystrophy: A novel pathogenic GUCA1A variant in COD
- Author
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Tang, Suzhen, Xia, Yujun, Dai, Yunhai, Liu, Yaning, Li, Jingshuo, Pan, Xiaojing, and Chen, Peng
- Subjects
Adult ,Aged, 80 and over ,Male ,Base Sequence ,Mutation, Missense ,Middle Aged ,Guanylate Cyclase-Activating Proteins ,Pedigree ,HEK293 Cells ,Phenotype ,Humans ,Female ,Amino Acid Sequence ,Cone Dystrophy ,Child ,Research Article ,Aged ,Genes, Dominant - Abstract
Purpose To elucidate the clinical phenotypes and pathogenesis of a novel missense mutation in guanylate cyclase activator A1A (GUCA1A) associated with autosomal dominant cone dystrophy (adCOD). Methods The members of a family with adCOD were clinically evaluated. Relevant genes were captured before being sequenced with targeted next-generation sequencing and confirmed with Sanger sequencing. Sequence analysis was made of the conservativeness of mutant residues. An enzyme-linked immunosorbent assay (ELISA) was implemented to detect the cyclic guanosine monophosphate (cGMP) concentration. Then limited protein hydrolysis and an electrophoresis shift were used to assess possible changes in the structure. Coimmunoprecipitation was employed to analyze the interaction between GCAP1 and retGC1. Immunofluorescence staining was performed to observe the colocalization of GCAP1 and retGC1 in human embryonic kidney (HEK)-293 cells. Results A pathogenic mutation in GUCA1A (c.431A>G, p.D144G, exon 5) was revealed in four generations of a family with adCOD. GUCA1A encodes guanylate cyclase activating protein 1 (GCAP1). D144, located in the EF4 loop involving calcium binding, was highly conserved in the species. GCAP1-D144G was more susceptible to hydrolysis, and the mobility of the D144G band became slower in the presence of Ca2+. At high Ca2+ concentrations, GCAP1-D144G stimulated retGC1 in the HEK-293 membrane to significantly increase intracellular cGMP protein concentrations. Compared with wild-type (WT) GCAP1, GCAP1-D144G had an increased interaction with retGC1, as detected in the coimmunoprecipitation assay. Conclusions The newly discovered missense mutation in GUCA1A (p.D144G) might lead to an imbalance of Ca2+ and cGMP homeostasis and eventually, cause a significant variation in adCOD.
- Published
- 2019
45. GCY-35/GCY-36—TAX-2/TAX-4 Signalling in O2 Sensory Neurons Mediates Acute Functional Ethanol Tolerance in Caenorhabditis elegans
- Author
-
Zheng-Xing Wu, Chang Li Ge, Ming Hai Ge, Hong Wang, Yu Zhang, Yuan Hua Chen, Qing Qin He, and Wei Tian
- Subjects
0301 basic medicine ,Sensory Receptor Cells ,lcsh:Medicine ,Sensory system ,Article ,Ion Channels ,03 medical and health sciences ,chemistry.chemical_compound ,medicine ,Animals ,Ethanol metabolism ,Receptor ,lcsh:Science ,Caenorhabditis elegans ,Caenorhabditis elegans Proteins ,Cyclic GMP ,Sensitization ,Multidisciplinary ,Ethanol ,biology ,lcsh:R ,Drug Tolerance ,biology.organism_classification ,Hedgehog signaling pathway ,Guanylate Cyclase-Activating Proteins ,Receptors, Neuropeptide Y ,Oxygen ,030104 developmental biology ,medicine.anatomical_structure ,Signalling ,chemistry ,Guanylate Cyclase ,lcsh:Q ,Neuroscience ,Signal Transduction - Abstract
Ethanol is a widely used beverage and abused drug. Alcoholism causes severe damage to human health and creates serious social problems. Understanding the mechanisms underlying ethanol actions is important for the development of effective therapies. Alcohol has a wide spectrum of effects on physiological activities and behaviours, from sensitization to sedation and even intoxication with increasing concentrations. Animals develop tolerance to ethanol. However, the underlying mechanisms are not well understood. In Caenorhabditis elegans, NPR-1 negatively regulates the development of acute tolerance to ethanol. Here, using in vivo Ca2+ imaging, behavioural tests and chemogenetic manipulation, we show that the soluble guanylate cyclase complex GCY-35/GCY-36—TAX-2/TAX-4 signalling pathway in O2 sensory neurons positively regulates acute functional tolerance in npr-1 worms.
- Published
- 2018
46. Structural Characterization of Ferrous Ion Binding to Retinal Guanylate Cyclase Activator Protein 5 from Zebrafish Photoreceptors
- Author
-
Sunghyuk Lim, Karl-W. Koch, Diana Cudia, Sarah-Karina Zlomke-Sell, Alexander Scholten, Grace Manchala, and James B. Ames
- Subjects
0301 basic medicine ,inorganic chemicals ,Biochemistry & Molecular Biology ,Light ,Metal ions in aqueous solution ,Dimer ,Nuclear Magnetic Resonance ,Size-exclusion chromatography ,Sequence Homology ,Medical Biochemistry and Metabolomics ,Biochemistry ,Article ,Retina ,03 medical and health sciences ,chemistry.chemical_compound ,Medicinal and Biomolecular Chemistry ,Ion binding ,Animals ,Photoreceptor Cells ,Ferrous Compounds ,Amino Acid Sequence ,Nuclear Magnetic Resonance, Biomolecular ,Binding Sites ,Sequence Homology, Amino Acid ,Chemistry ,Activator (genetics) ,Vertebrate ,fungi ,Isothermal titration calorimetry ,Zebrafish Proteins ,Guanylate Cyclase-Activating Proteins ,Dissociation constant ,Amino Acid ,030104 developmental biology ,Guanylate Cyclase ,Mutation ,Biophysics ,Biochemistry and Cell Biology ,Protein Multimerization ,Cysteine ,Photoreceptor Cells, Vertebrate ,Biomolecular ,Protein Binding - Abstract
Sensory guanylate cyclases (zGCs) in zebrafish photoreceptors are regulated by a family of guanylate cyclase activator proteins (called GCAP1-7). GCAP5 contains two non-conserved cysteine residues (Cys15 and Cys17) that could in principle bind to biologically active transition state metal ions (Zn2+ and Fe2+). Here, we present nuclear magnetic resonance (NMR) and isothermal titration calorimetry (ITC) binding analysis that demonstrate the binding of one Fe2+ ion to two GCAP5 molecules (in a 1:2 complex) with a dissociation constant in the nanomolar range. At least one other Fe2+ binds to GCAP5 with micromolar affinity that likely represents electrostatic Fe2+ binding to the EF-hand loops. The GCAP5 double mutant (C15A/C17A) lacks nanomolar binding to Fe2+, suggesting that Fe2+ at this site is ligated directly by thiolate groups of Cys15 and Cys17. Size exclusion chromatography analysis indicates that GCAP5 forms a dimer in both the Fe2+-free and Fe2+-bound states. NMR structural analysis and molecular docking studies suggest that a single Fe2+ ion is chelated by thiol side chains from Cys15 and Cys17 in the GCAP5 dimer, forming a [Fe(SCys)4] complex like that observed previously in two-iron superoxide reductases. Fe2+ binding to GCAP5 decreases its ability to activate photoreceptor human GC-E by decreasing GC-activity more than 10-fold. Our results indicate a strong Fe2+-induced inhibition of GC by GCAP5 and suggest that GCAP5 may serve as a redox sensor in visual phototransduction.
- Published
- 2017
47. Two retinal dystrophy-associated missense mutations inGUCA1Awith distinct molecular properties result in a similar aberrant regulation of the retinal guanylate cyclase
- Author
-
Daniele Dell'Orco, Karl-Wilhelm Koch, Alexander Scholten, and Valerio Marino
- Subjects
phototransduction, retinal dystrophy, cone-rod dystrophy, GCAP1, GUCA1a ,Retinal degeneration ,Hot Temperature ,Cations, Divalent ,Protein Conformation ,Allosteric regulation ,Mutant ,Mutation, Missense ,phototransduction ,Plasma protein binding ,Molecular Dynamics Simulation ,Biology ,Protein structure ,Retinal Dystrophies ,Genetics ,medicine ,Animals ,cone-rod dystrophy ,Magnesium ,retinal dystrophy ,Binding site ,Molecular Biology ,Genetics (clinical) ,Myristoylation ,Protein Stability ,GUCA1a ,General Medicine ,GCAP1 ,medicine.disease ,Molecular biology ,Guanylate Cyclase-Activating Proteins ,Protein tertiary structure ,Cell biology ,Gene Expression Regulation ,Guanylate Cyclase ,Calcium ,Protein Binding - Abstract
Two recently identified missense mutations (p. L84F and p. I107T) in GUCA1A, the gene coding for guanylate cyclase (GC)-activating protein 1 (GCAP1), lead to a phenotype ascribable to cone, cone-rod and macular dystrophies. Here, we present a thorough biochemical and biophysical characterization of the mutant proteins and their distinct molecular features. I107T-GCAP1 has nearly wild-type-like protein secondary and tertiary structures, and binds Ca(2+) with a >10-fold lower affinity than the wild-type. On the contrary, L84F-GCAP1 displays altered tertiary structure in both GC-activating and inhibiting states, and a wild type-like apparent affinity for Ca(2+). The latter mutant also shows a significantly high affinity for Mg(2+), which might be important for stabilizing the GC-activating state and inducing a cooperative mechanism for the binding of Ca(2+), so far not been observed in other GCAP1 variants. Moreover, the thermal stability of L84F-GCAP1 is particularly high in the Ca(2+)-bound, GC-inhibiting state. Molecular dynamics simulations suggest that such enhanced stability arises from a deeper burial of the myristoyl moiety within the EF1-EF2 domain. The simulations also support an allosteric mechanism connecting the myristoyl moiety to the highest-affinity Ca(2+) binding site EF3. In spite of their remarkably distinct molecular features, both mutants cause constitutive activation of the target GC at physiological Ca(2+). We conclude that the similar aberrant regulation of the target enzyme results from a similar perturbation of the GCAP1-GC interaction, which may eventually cause dysregulation of both Ca(2+) and cyclic GMP homeostasis and result in retinal degeneration.
- Published
- 2015
48. Dimerization Domain of Retinal Membrane Guanylyl Cyclase 1 (RetGC1) Is an Essential Part of Guanylyl Cyclase-activating Protein (GCAP) Binding Interface
- Author
-
Elena V. Olshevskaya, Alexander M. Dizhoor, and Igor V. Peshenko
- Subjects
inorganic chemicals ,Models, Molecular ,genetic structures ,Recombinant Fusion Proteins ,Molecular Sequence Data ,Receptors, Cell Surface ,Plasma protein binding ,Arginine ,Biochemistry ,Cyclase ,Protein Structure, Secondary ,Methionine ,Neurobiology ,Genes, Reporter ,Calcium-binding protein ,Humans ,heterocyclic compounds ,Protein Interaction Domains and Motifs ,Amino Acid Sequence ,Binding site ,Eye Proteins ,Molecular Biology ,Peptide sequence ,Coiled coil ,Binding Sites ,Chemistry ,Cell Biology ,Guanylate Cyclase-Activating Proteins ,Cell biology ,Luminescent Proteins ,HEK293 Cells ,Amino Acid Substitution ,Gene Expression Regulation ,Guanylate Cyclase ,Mutation ,cardiovascular system ,sense organs ,Protein Multimerization ,Signal transduction ,Receptors, Atrial Natriuretic Factor ,Sequence Alignment ,Protein Binding ,Signal Transduction ,Visual phototransduction - Abstract
The photoreceptor-specific proteins guanylyl cyclase-activating proteins (GCAPs) bind and regulate retinal membrane guanylyl cyclase 1 (RetGC1) but not natriuretic peptide receptor A (NPRA). Study of RetGC1 regulation in vitro and its association with fluorescently tagged GCAP in transfected cells showed that R822P substitution in the cyclase dimerization domain causing congenital early onset blindness disrupted RetGC1 ability to bind GCAP but did not eliminate its affinity for another photoreceptor-specific protein, retinal degeneration 3 (RD3). Likewise, the presence of the NPRA dimerization domain in RetGC1/NPRA chimera specifically disabled binding of GCAPs but not of RD3. In subsequent mapping using hybrid dimerization domains in RetGC1/NPRA chimera, multiple RetGC1-specific residues contributed to GCAP binding by the cyclase, but the region around Met(823) was the most crucial. Either positively or negatively charged residues in that position completely blocked GCAP1 and GCAP2 but not RD3 binding similarly to the disease-causing mutation in the neighboring Arg(822). The specificity of GCAP binding imparted by RetGC1 dimerization domain was not directly related to promoting dimerization of the cyclase. The probability of coiled coil dimer formation computed for RetGC1/NPRA chimeras, even those incapable of binding GCAP, remained high, and functional complementation tests showed that the RetGC1 active site, which requires dimerization of the cyclase, was formed even when Met(823) or Arg(822) was mutated. These results directly demonstrate that the interface for GCAP binding on RetGC1 requires not only the kinase homology region but also directly involves the dimerization domain and especially its portion containing Arg(822) and Met(823).
- Published
- 2015
49. Impaired Association of Retinal Degeneration-3 with Guanylate Cyclase-1 and Guanylate Cyclase-activating Protein-1 Leads to Leber Congenital Amaurosis-1
- Author
-
Robert S. Molday, Seifollah Azadi, Raju V. S. Rajala, Muna I. Naash, and Rahel Zulliger
- Subjects
Retinal degeneration ,congenital, hereditary, and neonatal diseases and abnormalities ,endocrine system ,genetic structures ,Retinal Photoreceptor Cell Outer Segment ,Leber Congenital Amaurosis ,Receptors, Cell Surface ,Biology ,Endoplasmic Reticulum ,medicine.disease_cause ,Biochemistry ,Mice ,Neurobiology ,Chlorocebus aethiops ,Protein targeting ,medicine ,Animals ,Humans ,Nuclear protein ,Eye Proteins ,Molecular Biology ,Endoplasmic reticulum ,Cell Membrane ,Nuclear Proteins ,Cell Biology ,medicine.disease ,eye diseases ,Guanylate Cyclase-Activating Proteins ,Transport protein ,Cell biology ,Protein Transport ,Guanylate Cyclase ,COS Cells ,GUCY2D ,sense organs ,Protein Binding ,Visual phototransduction - Abstract
One-fifth of all cases of Leber congenital amaurosis are type 1 (LCA1). LCA1 is a severe form of retinal dystrophy caused by loss-of-function mutations in guanylate cyclase 1 (GC1), a key member of the phototransduction cascade involved in modulating the photocurrents. Although GC1 has been studied for some time, the mechanisms responsible for its regulation and membrane targeting are not fully understood. We reported earlier that retinal degeneration 3 (RD3) protein interacts with GC1 and promotes its targeting to the photoreceptor outer segments (POS). Here, we extend our studies to show a direct association between RD3 and guanylate cyclase activating protein 1 (GCAP1). Furthermore, we demonstrate that this functional interaction is important for GC1 targeting to POS. We also show that most LCA1-causing mutations in GC1 result in lost GC1 interaction with RD3 or GC1 being targeted to the plasma membrane. Our data suggest that GC1, GCAP1, and RD3 form a complex in the endoplasmic reticulum that targets GC1 to POS. Interruption of this assembly is likely the underlying mechanism for a subset of LCA1. This study offers insights for the development of therapeutic strategies to treat this severe form of blindness. Background: Defects in the function of guanylate cyclase 1 (GC1) cause Leber congenital amaurosis (LCA) type 1. Results: GC1, GCAP1, and RD3 form a complex in the endoplasmic reticulum that targets GC1 to outer segments. Conclusion: A subset of LCA1 is caused by impaired formation of the RD3-GC1-GCAP1 complex. Significance: Understanding the molecular interaction of RD3 with GC1 and GCAP1 has potential therapeutic benefits for LCA1.
- Published
- 2015
50. Investigating the Ca
- Author
-
Frans, Vinberg and Vladimir J, Kefalov
- Subjects
Ions ,Mice, Knockout ,genetic structures ,Light ,Adaptation, Ocular ,Guanylate Cyclase-Activating Proteins ,Article ,Up-Regulation ,Kinetics ,Mice ,Retinal Rod Photoreceptor Cells ,Recoverin ,Retinal Cone Photoreceptor Cells ,Animals ,Calcium ,sense organs ,Cyclic GMP - Abstract
Vision is mediated by two types of photoreceptors: rods, enabling vision in dim light; and cones, which function in bright light. Despite many similarities in the components of their respective phototransduction cascades, rods and cones have distinct sensitivity, response kinetics, and adaptation capacity. Cones are less sensitive and have faster responses than rods. In addition, cones can function over a wide range of light conditions whereas rods saturate in moderately bright light. Calcium plays an important role in regulating phototransduction and light adaptation of rods and cones. Notably, the two dominant Ca2+-feedbacks in rods and cones are driven by the identical calcium-binding proteins: guanylyl cyclase activating proteins 1 and 2 (GCAPs), which upregulate the production of cGMP; and recoverin, which regulates the inactivation of visual pigment. Thus, the mechanisms producing the difference in adaptation capacity between rods and cones have remained poorly understood. Using GCAPs/recoverin-deficient mice, we show that mammalian cones possess another Ca2+-dependent mechanism promoting light adaptation. Surprisingly, we also find that, unlike in mouse rods, a unique Ca2+-independent mechanism contributes to cone light adaptation. Our findings point to two novel adaptation mechanisms in mouse cones that likely contribute to the great adaptation capacity of cones over rods.
- Published
- 2017
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