1. Leifsonia flava sp. nov., a novel actinobacterium isolated from the rhizosphere of Aquilegia viridiflora
- Author
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Yi-Xuan Zhang, Wen-Zhen Tao, Juan Cheng, Ying Cai, Meng-Yue Zhang, and Yu-Jun Ma
- Subjects
DNA, Bacterial ,0301 basic medicine ,China ,Peptidoglycan ,Sodium Chloride ,Biology ,DNA, Ribosomal ,Applied Microbiology and Biotechnology ,Microbiology ,03 medical and health sciences ,Cytosol ,Cell Wall ,RNA, Ribosomal, 16S ,Botany ,Cluster Analysis ,Phospholipids ,Phylogeny ,Soil Microbiology ,Base Composition ,Rhizosphere ,Phylogenetic tree ,Strain (chemistry) ,Aquilegia viridiflora ,Aquilegia ,Fatty Acids ,Temperature ,Nucleic Acid Hybridization ,Vitamin K 2 ,Pigments, Biological ,Sequence Analysis, DNA ,General Medicine ,Leifsonia psychrotolerans ,Hydrogen-Ion Concentration ,Leifsonia kafniensis ,16S ribosomal RNA ,Bacterial Typing Techniques ,Actinobacteria ,030104 developmental biology ,Optimal growth - Abstract
SYP-B2174T is a yellow-pigmented, Gram-positive, non-motile, and rod-shaped actinobacterium isolated from the rhizospheric soil of Aquilegia viridiflora Pall. collected from the Xinjiang uygur autonomous region of China. The strain's growth temperature ranges from 1 to 35°C, with an optimal growth being observed at 28°C. Growth occurs from 0 to 5% NaCl and at pH 6-8, with optimal growth being observed in 1% NaCl at pH 7. Comparative 16S rRNA gene sequence-based phylogenetic analysis placed the strain in a clade with the species Leifsonia kafniensis JCM 17021T and Leifsonia psychrotolerans DSM 22824T with similarities of 97.8 and 97.6%, respectively. The DNA-DNA hybridization values of the strain SYP-B2174T to its closest phylogenetic neighbors were significantly lower than 35.7%. The strain was identified as a novel species of the genus Leifsonia judging by the coryneform morphology, peptidoglycans based upon 2,4-diaminobutyric acid, principal phospholipids phosphatidylglycerol and diphosphatidylglycerol, major menaquinone MK-11, predominant fatty acids of anteiso-C15:0, anteiso-C17:0, and iso-C16:0, and a DNA G + C base composition of 68.7 mol%, for which the name Leifsonia flava sp. nov. is proposed. The type strain is SYP-B2174T (= CGMCC 1.15856T = DSM 105144T = KCTC 39963T).
- Published
- 2018
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