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Leifsonia flava sp. nov., a novel actinobacterium isolated from the rhizosphere of Aquilegia viridiflora
- Source :
- Journal of Microbiology. 56:549-555
- Publication Year :
- 2018
- Publisher :
- Springer Science and Business Media LLC, 2018.
-
Abstract
- SYP-B2174T is a yellow-pigmented, Gram-positive, non-motile, and rod-shaped actinobacterium isolated from the rhizospheric soil of Aquilegia viridiflora Pall. collected from the Xinjiang uygur autonomous region of China. The strain's growth temperature ranges from 1 to 35°C, with an optimal growth being observed at 28°C. Growth occurs from 0 to 5% NaCl and at pH 6-8, with optimal growth being observed in 1% NaCl at pH 7. Comparative 16S rRNA gene sequence-based phylogenetic analysis placed the strain in a clade with the species Leifsonia kafniensis JCM 17021T and Leifsonia psychrotolerans DSM 22824T with similarities of 97.8 and 97.6%, respectively. The DNA-DNA hybridization values of the strain SYP-B2174T to its closest phylogenetic neighbors were significantly lower than 35.7%. The strain was identified as a novel species of the genus Leifsonia judging by the coryneform morphology, peptidoglycans based upon 2,4-diaminobutyric acid, principal phospholipids phosphatidylglycerol and diphosphatidylglycerol, major menaquinone MK-11, predominant fatty acids of anteiso-C15:0, anteiso-C17:0, and iso-C16:0, and a DNA G + C base composition of 68.7 mol%, for which the name Leifsonia flava sp. nov. is proposed. The type strain is SYP-B2174T (= CGMCC 1.15856T = DSM 105144T = KCTC 39963T).
- Subjects :
- DNA, Bacterial
0301 basic medicine
China
Peptidoglycan
Sodium Chloride
Biology
DNA, Ribosomal
Applied Microbiology and Biotechnology
Microbiology
03 medical and health sciences
Cytosol
Cell Wall
RNA, Ribosomal, 16S
Botany
Cluster Analysis
Phospholipids
Phylogeny
Soil Microbiology
Base Composition
Rhizosphere
Phylogenetic tree
Strain (chemistry)
Aquilegia viridiflora
Aquilegia
Fatty Acids
Temperature
Nucleic Acid Hybridization
Vitamin K 2
Pigments, Biological
Sequence Analysis, DNA
General Medicine
Leifsonia psychrotolerans
Hydrogen-Ion Concentration
Leifsonia kafniensis
16S ribosomal RNA
Bacterial Typing Techniques
Actinobacteria
030104 developmental biology
Optimal growth
Subjects
Details
- ISSN :
- 19763794 and 12258873
- Volume :
- 56
- Database :
- OpenAIRE
- Journal :
- Journal of Microbiology
- Accession number :
- edsair.doi.dedup.....a783dc1a8c16ea1853dad43283f2a932
- Full Text :
- https://doi.org/10.1007/s12275-018-8061-z