30 results on '"Na, Byoung-Kuk"'
Search Results
2. Prevalence of glucose-6-phosphate dehydrogenase (G6PD) deficiency in Gia Lai Province, Vietnam
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Võ, Tuấn Cường, Lê, Hương Giang, Kang, Jung-Mi, Nguyễn, Đặng Thùy Dương, Nguyễn, Thu Hằng, Yoo, Won Gi, Goo, Youn-Kyoung, Thi Minh Trinh, Nguyen, Van Khanh, Chau, Hong Quang, Huynh, and Na, Byoung-Kuk
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- 2024
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3. Molecular surveillance of malaria in the Central Highlands, Vietnam
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Võ, Tuấn Cường, Lê, Hương Giang, Kang, Jung-Mi, Naw, Haung, Fan, Chia-Kwung, Trinh, Nguyen Thi Minh, Quang, Huynh Hong, and Na, Byoung-Kuk
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- 2021
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4. Cyclic constrained immunoreactive peptides from crucial P. falciparum proteins: potential implications in malaria diagnostics.
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Vashisht, Kapil, Srivastava, Sukrit, Vandana, Vandana, Das, Ram, Sharma, Supriya, Bhardwaj, Nitin, Anvikar, Anupkumar R, Singh, Susheel Kumar, Kim, Tong-Soo, Na, Byoung-Kuk, Shin, Ho-Joon, and Pandey, Kailash C.
- Abstract
Malaria is still a global challenge with significant morbidity and mortality, especially in the African, South-East Asian, and Latin American regions. Malaria diagnosis is a crucial pillar in the control and elimination efforts, often accomplished by the administration of mass-scale Rapid diagnostic tests (RDTs). The inherent limitations of RDTs- insensitivity in scenarios of low transmission settings and deletion of one of the target proteins- Histidine rich protein 2/3 (HRP-2/3) are evident from multiple reports, thus necessitating the need to explore novel diagnostic tools/targets. The present study used peptide microarray to screen potential epitopes from 13 antigenic proteins (CSP, EXP1, LSA1, TRAP, AARP, AMA1, GLURP, MSP1, MSP2, MSP3, MSP4, P48/45, HAP2) of P. falciparum. Three cyclic constrained immunoreactive peptides- C6 (EXP1), A8 (MSP2), B7 (GLURP) were identified from 5458 cyclic constrained peptides (in duplicate) against P. falciparum-infected sera. Peptides (C6, A8, B7- cyclic constrained) and (G11, DSQ, NQN- corresponding linear peptides) were fairly immunoreactive towards P. falciparum-infected sera in dot-blot assay. Using direct ELISA, cyclic constrained peptides (C6 and B7) were found to be specific to P. falciparum-infected sera. A substantial number of samples were tested and the peptides successfully differentiated the P. falciparum positive and negative samples with high confidence. In conclusion, the study identified 3 cyclic constrained immunoreactive peptides (C6, B7, and A8) from P. falciparum secretory/surface proteins and further validated for diagnostic potential of 2 peptides (C6 and B7) with field-collected P. falciparum-infected sera samples. [ABSTRACT FROM AUTHOR]
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- 2022
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5. Genetic polymorphism of vir genes of Plasmodium vivax in Myanmar
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Na, Byoung-Kuk, Kim, Tong-Soo, Lin, Khin, Baek, Moon-Chang, Chung, Dong-Il, Hong, Yeonchul, and Goo, Youn-Kyoung
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- 2021
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6. (‒)-Epicatechin reveals amoebicidal activity against Acanthamoeba castellanii by activating the programmed cell death pathway.
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Lê, Hương Giang, Kang, Jung-Mi, Võ, Tuấn Cường, Yoo, Won Gi, Hong, Yeonchul, and Na, Byoung-Kuk
- Abstract
• (‒)-Epicatechin revealed amoebicidal activity against Acanthamoeba trophozoites without cytotoxicity to mammalian cells • (‒)-Epicatechin induced death of Acanthamoeba castellanii via apoptosis-like programmed cell death and autophagic cell death pathways • (‒)-Epicatechin could be a candidate drug or supplemental compound for treating Acanthamoeba infections Acanthamoeba is an opportunistic pathogen that can cause human infections such as granulomatous amebic encephalitis and acanthamoeba keratitis. However, no specific drug to treat the diseases has been developed. Therefore, the discovery or development of novel drugs for treating Acanthamoeba infections is urgently needed. The anti-protozoan activity of (‒)-epicatechin (EC) has been reported, suggesting it is an attractive anti-protozoal drug candidate. In this study, the amoebicidal activity of EC against A. castellanii was assessed and its mechanism of action was unveiled. The amoebicidal activity of EC against A. castellanii trophozoites and the cytotoxicity of EC in HCE-2 and C6 cells were determined with cell viability assay. The underlying amoebicidal mechanism of EC against A. castellanii was analyzed by the apoptosis/necrosis assay, TUNEL assay, mitochondrial dysfunction assay, caspase-3 assay, and quantitative reverse transcription polymerase chain reaction. The cysticidal activity of EC was also investigated. EC revealed amoebicidal activity against A. castellanii trophozoites with an IC 50 of 37.01 ± 3.96 µM, but was not cytotoxic to HCE-2 or C6 cells. EC induced apoptotic events such as increases in DNA fragmentation and intracellular reactive oxygen species production in A. castellanii. EC also caused mitochondrial dysfunction in the amoebae, as evidenced by the loss of mitochondrial membrane potential and reductions in ATP production. Caspase-3 activity, autophagosome formation, and the expression levels of autophagy-related genes were also increased in EC-treated amoebae. EC led to the partial death of cysts and the inhibition of excystation. EC revealed promising amoebicidal activity against A. castellanii trophozoites via programmed cell death events. EC could be a candidate drug or supplemental compound for treating Acanthamoeba infections. [Display omitted] [ABSTRACT FROM AUTHOR]
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- 2024
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7. Kaempferol induces programmed cell death in Naegleria fowleri.
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Lê, Hương Giang, Kang, Jung-Mi, Võ, Tuấn Cường, and Na, Byoung-Kuk
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Naegleria fowleri is a brain-eating amoeba causing a fatal brain infection called primary amoebic meningoencephalitis (PAM). Despite its high mortality over 95%, effective therapeutic drug for PAM has not been developed yet. Therefore, development of an effective and safe therapeutic drug for PAM is urgently needed. In this study, we investigated anti-amoebic effect of kaempferol (KPF) against N. fowleri and its underlying anti-amoebic molecular mechanisms. Anti-amoebic activity of KPF against N. fowleri trophozoites, as well as cytotoxicity of KPF in C6 glial cells and CHO-K1 cells were investigated. The programmed cell death mechanisms in KPF-treated N. fowleri were also analyzed by apoptosis-necrosis assay, mitochondrial dysfunction assay, TUNEL assay, RT-qPCR, and CYTO-ID assay. KPF showed anti-amoebic activity against N. fowleri trophozoites with an IC 50 of 29.28 ± 0.63 μM. However, it showed no significant cytotoxicity to mammalian cells. KPF induced significant morphological alterations of the amoebae, resulting in death. Signals associated with apoptosis were detected in the amoebae upon treatment with KPF. KPF induced an increase of intracellular reactive oxygen species level, loss of mitochondrial membrane potential, increases of expression levels of genes associated with mitochondria dysfunction, and reduction of ATP levels in the amoebae. Autophagic vacuole accumulations with increased expression levels of autophagy-related genes were also detected in KPF-treated amoebae. KPF induces programmed cell death in N. fowleri trophozoites via apoptosis-like pathway and autophagy pathway. KPF could be used as a candidate of anti-amoebic drug or supplement compound in the process of developing or optimizing therapeutic drug for PAM. [ABSTRACT FROM AUTHOR]
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- 2023
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8. Expression characteristics and specific antibody reactivity of diverse cathepsin F members of Paragonimus westermani.
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Ahn, Chun-Seob, Na, Byoung-Kuk, Chung, Dong-ll, Kim, Jeong-Geun, Kim, Jin-Taek, and Kong, Yoon
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CATHEPSINS , *ANTIBODY formation , *PARAGONIMUS , *CYSTEINE proteinases , *PARAGONIMIASIS - Abstract
Paragonimiasis, caused by the lung fluke Paragonimus , is a major food-borne helminthic disease. Differential diagnosis of paragonimiasis from tuberculosis and other infectious granulomas in the lung is a prerequisite to proper management of patients. Cysteine proteases of Paragonimus westermani (PwCPs) invoke specific antibody responses against patient sera, while antibody capturing activity of different PwCPs has not been comparatively analyzed. In this study, we observed the expressional regulation of 11 species of different PwCPs (PwCP1-11). We expressed recombinant PwCPs and assessed diagnostic reliability employing sera from patients with P. westermani ( n = 138), other trematodiases ( n = 80), cestodiases ( n = 60) and pulmonary tuberculosis ( n = 20), and those of normal controls ( n = 20). PwCPs formed a monophyletic clade into cathepsin F and showed differential expression patterns along with developmental stages of worm. Bacterially expressed recombinant PwCPs (rPwCPs) exhibited variable sensitivity of 38.4–84.5% and specificity of 87.2–100% in diagnosing homologous infection. rPwCPs recognized specific antibodies of experimental cat sera as early as 3 or 6 weeks after infection. Patient sera of fascioliasis, Schistosomiasis japonicum and clonorchiasis demonstrated weak cross-reactions. Our results demonstrate that diverse PwCPs of the cathepsin F family participate in inducing specific antibody responses. Most P. westermani cathepsin F, except for PwCP2 (AAF21461), which showed negligible antibody responses, might be applicable for paragonimiasis serodiagnosis. [ABSTRACT FROM AUTHOR]
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- 2015
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9. Genetic polymorphism and effect of natural selection at domain I of apical membrane antigen-1 (AMA-1) in Plasmodium vivax isolates from Myanmar
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Moon, Sung-Ung, Na, Byoung-Kuk, Kang, Jung-Mi, Kim, Jung-Yeon, Cho, Shin-Hyeong, Park, Yun-Kyu, Sohn, Woon-Mok, Lin, Khin, and Kim, Tong-Soo
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GENETIC polymorphisms , *NATURAL selection , *PLASMODIUM vivax , *PARASITE antigens , *MALARIA vaccines , *MALARIA , *MEDICAL genetics - Abstract
Abstract: Malaria is endemic or hypoendemic in Myanmar and the country still contributes to the high level of malaria deaths in South-East Asia. Although information on the nature and extent of population diversity within malaria parasites in the country is essential not only for understanding the epidemic situation but also to establish a proper control strategy, very little data is currently available on the extent of genetic polymorphisms of the malaria parasites in Myanmar. In this study, we analyzed the genetic polymorphism and natural selection at domain I of the apical membrane antigen-1 (AMA-1) among Plasmodium vivax Myanmar isolates. A total of 34 distinguishable haplotypes were identified among the 76 isolates sequenced. Comparison with the previously available PvAMA-1 sequences in the GenBank database revealed that 21 of them were new haplotypes that have never been reported till date. The difference between the rate of nonsynonymous (dN) and synonymous (dS) mutations was positive (dN−dS, 0.013±0.005), suggesting the domain I is under positive natural selection. The Tajima''s D statistics was found to be −0.74652, suggesting that the gene has evolved under population size expansion and/or positive selection. The minimum recombination events were also high, indicating that recombination may occur within the domain I resulting in allelic diversity of PvAMA-1. Our results collectively suggest that PvAMA-1 displays high genetic polymorphism among Myanmar P. vivax isolates with highly diversifying selection at domain I. These results have significant implications in understanding the nature of P. vivax population circulating in Myanmar as well as providing useful information for malaria vaccine development based on this antigen. [Copyright &y& Elsevier]
- Published
- 2010
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10. CsCF-6, a novel cathepsin F-like cysteine protease for nutrient uptake of Clonorchis sinensis
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Na, Byoung-Kuk, Kang, Jung-Mi, and Sohn, Woon-Mok
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CYSTEINE proteinases , *BILIARY tract , *PHYLOGENY , *IMMUNOGLOBULIN G - Abstract
Abstract: Clonorchis sinensis, the Chinese liver fluke, is a trematode parasite that causes clonorchiasis in humans. In this study, we identified a novel gene encoding a cathepsin F-like cysteine protease of C. sinensis (CsCF-6) and characterised its role in nutrient uptake by the parasite. Sequence and phylogeny analyses showed that CsCF-6 was clearly different from all presently known C. sinensis cysteine proteases and was classified into the cathepsin F-like subgroup. The optimum pH for recombinant CsCF-6 was pH 4.5 and the enzyme was relatively stable in acidic conditions. Recombinant CsCF-6 readily hydrolysed several human proteins including collagen, fibronectin, haemoglobin, immunoglobulin G and albumin at acidic pH, but low levels of hydrolysis were observed at neutral pH. CsCF-6 expression was detected throughout various developmental stages, metacercariae, juvenile and adult worms, and the transcription level increased gradually in accordance with the maturation of the parasite. A large quantity of CsCF-6 was identified in excretory and secretory products and a series of processing intermediates were found in soluble and insoluble fractions of the parasite. Immunolocalization analysis showed that CsCF-6 was mainly localised in the intestine and intestinal contents of the parasite. These results collectively suggested that CsCF-6, which is synthesised in the intestinal epithelium and secreted into the intestinal lumen of the parasite, digests various host proteins and therefore might play an important role in nutrient uptake by C. sinensis. [Copyright &y& Elsevier]
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- 2008
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11. Sequence analysis of hemagglutinin and nucleoprotein genes of measles viruses isolated in Korea during the 2000 epidemic
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Na, Byoung-Kuk, Lee, Jin-Soo, Shin, Gu-Choul, Mi Shin, Ju, Lee, Joo-Yeon, Chung, Jae-Keun, Ha, Dong-Ryong, Lee, Jong-Koo, Ma, Sang-Hyuk, Cho, Hae-Wol, Kang, Chun, and Kim, Woo-Joo
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- 2001
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12. Clonorchis sinensis and clonorchiasis.
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Na, Byoung-Kuk, Pak, Jhang Ho, and Hong, Sung-Jong
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CLONORCHIS sinensis , *BILE ducts , *FRESHWATER snails , *OBSTRUCTIVE jaundice , *FRESHWATER fishes , *CIRRHOSIS of the liver , *INTRAHEPATIC bile ducts - Abstract
Clonorchis sinensis is a fish-borne trematode that inhabits the bile duct of mammals including humans. Clonorchiasis is prevalent in China, Korea, and Vietnam, and 15–20 million people are estimated to be infected by this fluke. Freshwater snails act as the first intermediate host for the proliferation of C. sinensis larvae and shed the cercariae into water. The cercariae penetrate the skin of freshwater fish and transform to metacercariae. Humans are infected by eating raw or undercooked freshwater fish as dishes of filet, "sashimi," or congee, which contain C. sinensis metacercariae. In humans, the C. sinensis metacercariae excyst in the duodenum, and juvenile flukes migrate up via bile chemotaxis into bile ducts. Once there, C. sinensis provokes hyperplasia of the bile duct epithelium, obstructive jaundice, ascites, liver enlargement and cirrhosis, and infrequent cholangiocarcinoma (CCA). Although the association between C. sinensis infection and CCA has been firmly established in past decades, the underlying mechanisms are not elucidated in detail. In the context of chronic clonorchiasis-associated hepatobiliary aberrations, the constitutive disruption of redox homeostasis and dysregulation of physiological signaling pathways may promote the malignant transformation of cholangiocytes, thus leading to substantial acquisition of a more aggressive phenotype by these cells: CCA. With advances of genomic and molecular biological approaches, diverse C. sinensis proteins that are essential for parasite physiology and pathogenicity have been identified and characterized. Some of the proteins have been considered as attractive targets for development of vaccines and chemotherapeutics. Candidate antigens for reliable serodiagnosis of clonorchiasis have been studied. [ABSTRACT FROM AUTHOR]
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- 2020
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13. Dynamic changes of Plasmodium vivax population structure in South Korea.
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Kang, Jung-Mi, Lee, Jinyoung, Cho, Pyo-Yun, Kim, Tae Im, Sohn, Woon-Mok, Park, Jae-Won, Kim, Tong-Soo, and Na, Byoung-Kuk
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PLASMODIUM vivax , *MALARIA , *MEROZOITES , *PARASITES , *GENETICS - Abstract
The vivax malaria epidemic has persisted in South Korea since its reemergence in 1993. Although there has been a significant decrease in the number of malaria cases in recent years, vivax malaria is still a major public health concern. To gain in-depth insight into the genetic makeup of Korean Plasmodium vivax , we analyzed polymorphic patterns of two major antigens, merozoite surface protein-1 (MSP-1) and MSP-3α, in 255 Korean P. vivax isolates collected over an extended period from 1998 to 2013. Combinational genetic analysis of polymorphic patterns of MSP-1 and MSP-3α in the isolates suggests that the P. vivax population in South Korea has been diversifying rapidly, with the appearance of parasites with new genotypes, despite the recent reduction of disease incidence. These results highlight the importance of molecular epidemiological investigations to supervise the genetic variation of the parasite in South Korea. [ABSTRACT FROM AUTHOR]
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- 2016
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14. Peroxiredoxin 6 expression is inversely correlated with nuclear factor-κB activation during Clonorchis sinensis infestation.
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Pak, Jhang Ho, Son, Woo Chan, Seo, Sang-Beom, Hong, Sung-Jong, Sohn, Woon-Mok, Na, Byoung-Kuk, and Kim, Tong-Soo
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LIVER flukes , *CLONORCHIS sinensis , *PEROXIREDOXINS , *GENE expression , *NF-kappa B , *CARCINOGENESIS , *OXIDATIVE stress - Abstract
Clonorchis sinensis is a carcinogenic human liver fluke. Its infection promotes persistent oxidative stress and chronic inflammation environments in the bile duct and surrounding liver tissues owing to direct contact with worms and their excretory–secretory products (ESPs), provoking epithelial hyperplasia, periductal fibrosis, and cholangiocarcinogenesis. We examined the reciprocal regulation of two ESP-induced redox-active proteins, NF-κB and peroxiredoxin 6 (Prdx6), during C. sinensis infection. Prdx6 overexpression suppressed intracellular free-radical generation by inhibiting NADPH oxidase2 and inducible nitric oxide synthase activation in the ESP-treated cholangiocarcinoma cells, substantially attenuating NF-κB-mediated inflammation. NF-κB overexpression decreased Prdx6 transcription levels by binding to two κB sites within the promoter. This transcriptional repression was compensated for by other ESP-induced redox-active transcription factors, including erythroid 2-related factor 2 (Nrf2), hypoxia inducible factor 1α (HIF1α), and CCAAT/enhancer-binding protein β (C/EBPβ). Distribution of immunoreactive Prdx6 and NF-κB was distinct in the early stages of infection in mouse livers but shared concomitant localization in the later stages. The intensity and extent of their immunoreactive staining in infected mouse livers are proportional to lesion severity and infection duration. The constitutive elevations of Prdx6 and NF-κB during C. sinensis infection may be associated with more severe persistent hepatobiliary abnormalities mediated by clonorchiasis. [ABSTRACT FROM AUTHOR]
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- 2016
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15. Oxidative stress-mediated mouse liver lesions caused by Clonorchis sinensis infection.
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Maeng, Sejung, Lee, Hye Won, Bashir, Qudsia, Kim, Tae Im, Hong, Sung-Jong, Lee, Tae Jin, Sohn, Woon-Mok, Na, Byoung-Kuk, Kim, Tong-Soo, and Pak, Jhang Ho
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OXIDATIVE stress , *LIVER diseases , *CLONORCHIS sinensis , *HYPERPLASIA , *DNA adducts , *LIPID peroxidation (Biology) - Abstract
Clonorchis sinensis is a high-risk pathogenic helminth that strongly provokes inflammation, epithelial hyperplasia, periductal fibrosis, and even cholangiocarcinoma in chronically infected individuals. Chronic inflammation is associated with an increased risk of various cancers due to the disruption of redox homeostasis. Accordingly, the present study was conducted to examine the time course relationship between histopathological changes and the appearance of oxidative stress markers, including lipid peroxidation, enzymes involved in lipid peroxidation, and mutagenic DNA adducts in the livers of mice infected with C. sinensis , as well as proinflammatory cytokines in infected mouse sera. Histopathological phenotypes such as bile duct epithelial hyperplasia, periductal fibrosis, edema and inflammatory infiltration increased in infected livers in a time-dependent manner. Intense immunoreactivity of lipid peroxidation products (4-hydroxy-2-nonenal; malondialdehyde), cyclooxygenase-2, 5-lipoxygenase and 8-oxo-7,8-dihydro-2′-deoxyguanosine were concomitantly observed in these injured regions. We also found elevated expressions of cyclooxygenase-2 and 5-lipoxygenase in C. sinensis excretory-secretory product-treated cholangiocarcinoma cells. Moreover, the levels of proinflammatory cytokines such as TNF-α, ILβ-1 and IL-6 were differentially upregulated in infected sera. With regard to oxidative stress-mediated carcinogenesis, our findings suggest that C. sinensis infestation may disrupt host redox homeostasis, creating a damaging environment that favors the development of advanced hepatobiliary diseases such as clonorchiasis-associated cholangiocarcinoma. [ABSTRACT FROM AUTHOR]
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- 2016
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16. Mapping of the putative epitope domain of Clonorchis sinensis paramyosin (CsPmy) recognized by CsPmy-specific immunoglobulin G in sera of human clonorchiasis.
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Kang, Jung-Mi, Ju, Hye-Lim, Lee, Jinyoung, Kim, Tae Im, Cho, Shin-Hyeong, Kim, Tong-Soo, Sohn, Woon-Mok, and Na, Byoung-Kuk
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GENE mapping , *EPITOPES , *CLONORCHIS sinensis , *MYOSIN , *IMMUNOGLOBULIN G , *CLONORCHIASIS - Abstract
Paramyosin of Clonorchis sinensis (CsPmy) is a myofibrillar protein localized in subtegumental muscle, tegument, and the muscle layer surrounding the intestine of the parasite. Previously, we have identified that CsPmy reacted with sera of human clonorchiasis and this protein had a potential as a candidate antigen for serodiagnosis of clonorchiasis. However, we also found that CsPmy is able to bind to human immunoglobulin G (IgG) in non-specific manners, which can affect the diagnostic value of the protein. Here, we mapped CsPmy-specific IgG binding site on CsPmy to analyze the putative epitopes recognized by CsPmy-specific IgG in sera of human clonorchiasis. The fragmental expression of CsPmy followed by immunoblot analyses with sera from patients with clonorchiasis and non-specific human IgG revealed that the middle portion of CsPmy (CsPmyC: 301–600 amino acid residues) had epitopes responsible for CsPmy-specific IgG recognition. The precise CsPmy-specific IgG binding site was further narrowed down to a fragment (CsPmyC-2), which harbors 151 amino acid residues (375–525) of CsPmy. Specific antibodies for CsPmyC-2 were produced in rats after two-weeks of post-experimental infection. The CsPmyC-2 showed low levels of cross reactivity against the sera from patients with other helminth parasites. Our results suggested that CsPmyC-2 has real epitopes recognized by CsPmy-specific IgG in sera of human clonorchiasis and the fragment can be useful as a reliable serodiagnostic antigen to develop a serodiagnostic method for clonorchiasis. [ABSTRACT FROM AUTHOR]
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- 2015
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17. Characterization of a novel otubain-like cysteine protease of Cryptosporidium parvum.
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Ju, Hye-Lim, Kang, Jung-Mi, Noh, Hae Sook, Kim, Deok Ryong, Hong, Yeonchul, Sohn, Woon-Mok, and Na, Byoung-Kuk
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CYSTEINE proteinases , *CRYPTOSPORIDIUM parvum , *UBIQUITIN , *BIOCHEMISTRY , *GENETIC code , *ASPARTIC acid - Abstract
Abstract: Otubains are a recently discovered family of cysteine proteases that participate in the ubiquitin pathway. Here, we partially characterized the biochemical properties of a cysteine protease of Cryptosporidium parvum, which is closely related to otubains. The gene encoding otubain-like cysteine protease of C. parvum (CpOTU) contained the aspartate, cysteine and histidine residues that form the catalytic triad of otubains. The modified ubiquitin-associated domain and LxxL motif were identified in CpOTU. The recombinant CpOTU showed the isopeptidase activity at neutral pH values and its activity was effectively inhibited by ubiquitin aldehyde, N-ethylmaleimide and iodoacetic acid. Interestingly, CpOTU had an unusual C-terminal extension of 217 amino acids compared to mammalian otubains, and the C-terminal extension is essential for the activity of the enzyme. Expression of CpOTU peaked in the oocyst stage of the parasite, which suggested its potential physiological role for the oocyst stage. [Copyright &y& Elsevier]
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- 2014
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18. Defining the regulatory and inhibitory elements within the prodomain of CsCF-6, a cathepsin F cysteine protease of Clonorchis sinensis.
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Kang, Jung-Mi, Ju, Hye-Lim, Sohn, Woon-Mok, and Na, Byoung-Kuk
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CATHEPSINS , *CYSTEINE proteinase inhibitors , *CLONORCHIS sinensis , *PROTEIN folding , *ENZYME inhibitors - Abstract
Highlights: [•] The prodomain of CsCF-6 plays bi-functional roles of folding and inhibition of CsCF-6. [•] The prodomain of showed broad inhibitory activity against several cysteine proteases. [•] The bi-functional roles of the prodomain relied on ERFNAQ and GTFD motifs. [ABSTRACT FROM AUTHOR]
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- 2013
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19. Genetic diversity and natural selection of Duffy binding protein of Plasmodium vivax Korean isolates
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Ju, Hye-Lim, Kang, Jung-Mi, Moon, Sung-Ung, Bahk, Young-Yil, Cho, Pyo-Yun, Sohn, Woon-Mok, Park, Yun-Kyu, Park, Jae-Won, Kim, Tong-Soo, and Na, Byoung-Kuk
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PLASMODIUM vivax , *NATURAL selection , *PROTEIN binding , *ERYTHROCYTES , *MEROZOITES , *GENETIC polymorphisms , *EPITOPES - Abstract
Abstract: Plasmodium vivax Duffy binding protein (PvDBP) is a micronemal type I membrane protein that plays an essential role in erythrocyte invasion of merozoites. PvDBP is a prime blood stage vaccine candidate antigen against P. vivax, but its polymorphic nature represents a major obstacle to the successful design of a protective vaccine against vivax malaria. In this study, we analyzed the genetic polymorphism and natural selection at the N-terminal cysteine-rich region of PvDBP (PvDBPII) among 70 P. vivax isolates collected from Korean patients during 2005–2010. Seventeen single nucleotide polymorphisms (SNP), which resulted in 14 non-synonymous and 3 synonymous mutations, were found in PvDBPII among the Korean P. vivax isolates. Sequence analyses revealed that 13 different PvDBPII haplotypes, which were clustered into 3 distinct clades, were identified in Korean P. vivax isolates. The difference between the rates of nonsynomyous and synonymous mutations suggested that the region has evolved under natural selection. High selective pressure preferentially acted on regions identified or predicted to be B- and T-cell epitopes and MHC binding regions of PvDBPII. Recombination may also contribute to genetic diversity of PvDBPII. Our results suggest that PvDBPII of Korean P. vivax isolates display a limited genetic polymorphism and are under selective pressure. These results have significant implications for understanding the nature of the P. vivax population circulating in Korea and provide useful information for development of malaria vaccines based on this antigen. [Copyright &y& Elsevier]
- Published
- 2013
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20. Characterization of the biochemical properties of two methionine aminopeptidases of Cryptosporidium parvum
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Kang, Jung-Mi, Ju, Hye-Lim, Sohn, Woon-Mook, and Na, Byoung-Kuk
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METHIONINE aminopeptidase , *CRYPTOSPORIDIUM parvum , *AMINO acids , *BINDING sites , *GENE expression , *PHENANTHROLINE , *ENZYME inhibitors - Abstract
Abstract: We identified two methionine aminopeptidases of Cryptosporidium parvum (CpMetAP1 and CpMetAP2) and characterized the biochemical properties of the recombinant enzymes. CpMetAP1 and CpMetAP2 belong to the type I and type II MetAP subfamilies, respectively. Both CpMetAPs have typical amino acid residues essential for metal binding and substrate binding sites, which are conserved in the MetAP family. Bacterially expressed recombinant CpMetAP1 and CpMetAP2 showed similar biochemical properties including a broad optimal pH range (pH 7.5–8.5) with maximum activity at pH 8.0. The two enzymes were stable under neutral and alkaline pHs but were relatively unstable under acidic conditions. The activities of CpMetAP1 and CpMetAP2 increased highly in the presence of Mn2+ and Co2+. CpMetAP1 and CpMetAP2 were effectively inhibited by the metal chelators, EDTA and 1,10-phenanthroline, and were partially inhibited by the aminopeptidase inhibitors, amastatin and bestatin. Fumagillin also showed an inhibitory effect on both CpMetAPs. [Copyright &y& Elsevier]
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- 2012
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21. Comparative biochemical and functional properties of two leucine aminopeptidases of Clonorchis sinensis
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Kang, Jung-Mi, Ju, Hye-Lim, Ju, Jung-Won, Sohn, Woon-Mok, Kim, Tong-Soo, Bahk, Young-Yil, Hong, Sung-Jong, and Na, Byoung-Kuk
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LEUCINE aminopeptidase , *POLYPEPTIDES , *AMINO acid sequence , *GENETIC code , *METAL ions , *EPITHELIAL cells , *BESTATIN , *COMPARATIVE studies - Abstract
Abstract: Leucine aminopeptidases (LAP; EC 3.4.11.1) are a group of metalloexopeptidases, which catalyze the sequential removal of leucine amino acids from the N-termini of the polypeptides or proteins. In this study, we identified two novel genes that encode LAPs of Clonorchis sinensis (CsLAP1 and CsLAP2) and characterized their biochemical and functional properties. Multiple sequence alignment of the deduced amino acid sequences of CsLAP1 and CsLAP2 with those of other organisms revealed that typical metal-binding coordinating and active site residues for LAPs were well conserved in CsLAP1 and CsLAP2. Recombinant CsLAP1 and CsLAP2 showed similar biochemical properties such as pH optima at pH 8.0 and stability at neutral pHs. Both enzymes were specifically inhibited by bestatin and showed preferential substrate specificity for Leu-MCA. However, the enzymes differed in that they required different metal ions for maximum activity. Expressions of CsLAP1 and CsLAP2 were detected throughout the various developmental stages of C. sinensis, and their transcription levels increased gradually in accordance with the maturation of the parasite. Both enzymes were identified in soluble worm extract of C. sinensis, but not in excretory and secretory products. Immunolocalization studies showed that both enzymes were co-localized to the intestinal epithelial cells and gastrodermis of the parasite. These results collectively suggest that CsLAP1 and CsLAP2 are synthesized in the intestinal epithelial and gastrodermal cells of C. sinensis and may be involved in the final digestion of peptides that hydrolyzed within intestinal lumen followed by absorbed into gastrodermal cells of the parasite. [Copyright &y& Elsevier]
- Published
- 2012
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22. Identification and functional characterization of CsStefin-1, a cysteine protease inhibitor of Clonorchis sinensis
- Author
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Kang, Jung-Mi, Lee, Kon-Ho, Sohn, Woon-Mok, and Na, Byoung-Kuk
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CYSTEINE proteinase inhibitors , *LIVER flukes , *HOST-parasite relationships , *RECOMBINANT proteins , *EPITHELIUM , *SIGNAL peptidases , *CYSTATINS , *PHYLOGENY - Abstract
Abstract: Cathepsin Fs of Clonorchis sinensis (CsCFs) are major secreted proteins that are expressed in the intestine of the parasite and play pivotal roles in parasite nutrition and host–parasite interactions. However, strict regulation of their activities is also essential to minimize inadequate superfluous damage to the parasite and host. In this study, we identified and characterized a novel cysteine protease inhibitor of C. sinensis, CsStefin-1, as a modulator of CsCFs. CsStefin-1 was shown to be a typical cysteine protease inhibitor of family 1 cystatins that lacks the N-terminal signal peptide and C-terminal cysteine residues required for disulfide bond formation. Phylogenetic and structural analyses also showed that CsStefin-1 is a family 1 intracellular cystatin. Bacterially expressed CsStefin-1 effectively inhibited various cysteine proteases, including human cathepsin B, human cathepsin L, papain, and CsCFs. CsStefin-1 was active over a wide pH range and was highly stable under physiological conditions. CsStefin-1 also inhibited the processing of CsCFs. CsStefin-1 was expressed throughout various developmental stages of the parasite from metacercaria to adult worm and the protein was detected in worm extract, but not in the excretory and secretory products of adult worm. Immunolocalization analysis showed that CsStefin-1 was mainly localized to the intestinal epithelium, where CsCFs are actively synthesized. Our results collectively suggest the regulatory functions of CsStefin-1, modulation of CsCFs activity and processing, to protect the parasite from superfluous damage by the endogenous cysteine proteases. [Copyright &y& Elsevier]
- Published
- 2011
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23. Identification and characterization of a serine protease inhibitor of Clonorchis sinensis
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Kang, Jung-Mi, Sohn, Woon-Mok, Ju, Jung-Won, Kim, Tong-Soo, and Na, Byoung-Kuk
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SERINE proteinase inhibitors , *RECOMBINANT proteins , *SERPINS , *LIVER flukes , *PHYLOGENY , *GENE expression - Abstract
Abstract: A gene encoding a serine protease inhibitor of Clonorchis sinensis (CsSERPIN) was identified and characterized. CsSERPIN contained an open reading frame of 1158bp that encoded 385 amino acid residues. Sequence analysis of the primary structure of CsSERPIN revealed that it had essential structural motifs including a reactive central loop (RCL), which well conserved in the serine protease inhibitor (serpin) superfamily. CsSERPIN was classified as a member of the ovalbumin-type serpin family on the basis of phylogenetic analysis and the absence of a classical N-terminal signal peptide. Recombinant CsSERPIN showed an inhibitory effect on chymotrypsin in a dose-dependent manner, but did not effectively inhibit trypsin, thrombin, elastases or cathepsin G. Optimal pH values of CsSERPIN were between 7.0 and 9.0, as evidenced by the rapid loss of inhibitory activity under acidic conditions. CsSERPIN was expressed at various developmental stages of the parasite, from eggs to adult worms, but its expression level was higher in eggs and adult worms than in metacercariae and juvenile worms. CsSERPIN was identified in the soluble extract of the parasite, but not in the excretory and secretory products (ESP) or insoluble extract of the parasite. Immunolocalization analysis of CsSERPIN showed that it mainly localized to the eggs and vitelline glands of the adult worm. These results suggest that intracellular CsSERPIN may be possibly involved in maintaining the physiology of eggs as well as in egg production of C. sinensis by regulating endogenous serine proteases. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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24. A family of cathepsin F cysteine proteases of Clonorchis sinensis is the major secreted proteins that are expressed in the intestine of the parasite
- Author
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Kang, Jung-Mi, Bahk, Young-Yil, Cho, Pyo-Yun, Hong, Sung-Jong, Kim, Tong-Soo, Sohn, Woon-Mok, and Na, Byoung-Kuk
- Subjects
- *
PROTEOLYTIC enzymes , *LIVER flukes , *HELMINTHS , *PROTEOMICS , *EPITHELIAL cells , *MOLECULAR genetics , *MOLECULAR cloning , *PROTEOLYSIS , *INTESTINES , *HOST-parasite relationships ,PARASITE physiology - Abstract
Abstract: Cysteine proteases of helminth parasites play essential roles in parasite physiology as well as in a variety of important pathobiological processes. In this study, we identified a multigene family of cathepsin F cysteine proteases in Clonorchis sinensis (CsCFs). We identified a total of 12 CsCF genes through cDNA cloning using degenerate PCR primers followed by RACE. Sequence and phylogenetic analysis of the genes suggested they belonged to the cathepsin F-like enzyme family and further clustered into three different subfamilies. Enzymatic and proteomic analysis of C. sinensis excretory and secretory products (ESP) revealed that multiple isoforms of CsCF were the major proteins present in the ESP and the proteolytic activity of the ESP is mainly attributable to the enzymes. Comparative analysis of representative enzymes for each subfamily, CsCF-4, CsCF-6, and CsCF-11, showed that they share similar biochemical properties typical for cathepsin F-like enzymes, but significant differences were also identified. The enzymes were expressed throughout various developmental stages of the parasite and the transcripts increased gradually in accordance with the maturation of the parasite. Immunolocalization analysis of CsCFs showed that they were mainly localized in the intestine and intestinal contents of the parasite. These results collectively suggested that CsCFs, which are apparently synthesized in the epithelial cells lining the parasite intestine and secreted into the intestinal lumen of the parasite, might have a cooperative role for nutrient uptake in the parasite. Furthermore, they were eventually secreted into outside of the parasite and may perform additional functions for host–parasite interactions. [Copyright &y& Elsevier]
- Published
- 2010
- Full Text
- View/download PDF
25. High frequency of genetic diversity of Plasmodium vivax field isolates in Myanmar
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Moon, Sung-Ung, Lee, Hyeong-Woo, Kim, Jung-Yeon, Na, Byoung-Kuk, Cho, Shin-Hyeong, Lin, Khin, Sohn, Woon-Mok, and Kim, Tong-Soo
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MALARIA , *PROTOZOAN diseases , *BIOMARKERS , *PLASMODIUM falciparum - Abstract
Abstract: Malaria is one of the most serious problems threatening human health in Myanmar. Although the morbidity and mortality rates due to malaria have been gradually declining, Myanmar still contributes to a large proportion of malarial death in the South-East Asia region. However, little is known about the nature and extent of genetic diversity of the malarial parasites circulating in Myanmar. In this study, we investigated the overall infection status of Plasmodium and the population diversity of Plasmodium vivax by analyzing three genetic markers, circumsporozoite protein (CSP), merozoite surface protein-1 (MSP-1), and merozoite surface protein-3 (MSP-3α), of P. vivax field isolates collected from infected individuals. In 349 blood samples collected from the individuals who exhibited clinical symptoms associated with malaria, 63.0% showed a positive result for malaria (220/349). P. vivax was detected in 58.2% (128/220) and Plasmodium falciparum was detected in 29.1% (64/220). Mixed infections with both parasites were detected in 12.7% (28/220). The 116 blood samples in which single infection of P. vivax was confirmed were selected and subjected to further genetic analysis. Genotyping of the CSP gene of P. vivax showed that VK210 type (98.3%, 114/116) is predominant in Myanmar, but a significant level of mixed infections of VK210 and VK247 types (24.1%, 28/116) was also identified. Sequence analyses of MSP-1 and MSP-3α genes revealed a large number of distinguishable alleles: 12 for MSP-1 and 25 for MSP-3α. These results collectively suggest that the P. vivax population in Myanmar is highly diverse and multiple clonal infections are prevalent in the country. [Copyright &y& Elsevier]
- Published
- 2009
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26. Functional identification of a protein inhibitor of neuronal nitric oxide synthase of Taenia solium metacestode
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Kim, Seon-Hee, Chung, Joon-Yong, Bae, Young-An, Cai, Guo-Bin, Na, Byoung-Kuk, Kim, Nam-Joo, Kwack, Han-Shik, Kim, Tong-Soo, and Kong, Yoon
- Subjects
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NITRIC oxide , *PROTEIN analysis , *TAENIA , *MOLECULAR parasitology - Abstract
Abstract: The protein inhibitor of neuronal nitric oxide synthase (PIN) performs critical functions in several biological processes including inhibition of neuronal nitric oxide synthase (nNOS) activity, intracellular trafficking of proteins and cellular maturation. In this study, we isolated a gene that putatively encoded a PIN homologue in the Taenia solium metacestode (TsM), a causative agent for neurocysticercosis (NC). A full-length cDNA of 452-bp in length, designated TsMPIN, was found to encode an open reading frame (ORF) of 103 amino acids with a predicted molecular weight of 11.3kDa. This single copy gene possessed an intervening short intron (74bp-long) within its ORF region. The deduced amino acid sequence revealed a substantial degree of sequence identity with the PINs and the dynein light-chains isolated from other organisms (63–81%). TsMPIN ectopically expressed in neuroblastoma N1E115 cells effectively inhibited dimerization of nNOS upon stimulation. The recombinant TsMPIN also negatively regulated the dimerization of recombinant nNOS, which was attenuated significantly by the TsMPIN-specific antibody. TsMPIN was primarily localized in the lining cells of the trabecules and the muscles surrounding the scolex, and was sparsely within the cytosol of the bladder wall. We also identified TsM nNOS-immunoreactive protein by both NADPH-diaphorase histochemical staining, and immunohistochemical localization and immunoprecipitation with antibodies specific to nNOS N-terminus. These two functionally related proteins showed a co-localized expression pattern. Our results strongly suggest that the production of NO in the TsM might be tightly regulated through the nNOS-TsMPIN feedback system to maintain physiological homeostasis in the parasite. [Copyright &y& Elsevier]
- Published
- 2007
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27. Identification and characterization of a cathepsin L-like cysteine protease from Taenia solium metacestode
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Li, Ai Hua, Moon, Sung-Ung, Park, Yun-Kyu, Na, Byoung-Kuk, Hwang, Myung-Gi, Oh, Chang-Mi, Cho, Shin-Hyeong, Kong, Yoon, Kim, Tong-Soo, and Chung, Pyung-Rim
- Subjects
- *
AMINO acids , *RECOMBINANT proteins , *BLOOD plasma , *NERVOUS system - Abstract
Abstract: Taenia solium metacestode, a larval pork tapeworm, is a causative agent of neurocysticercosis, one of the most common parasitic diseases in the human central nervous system. In this study, we identified a cDNA encoding for a cathepsin L-like cysteine protease from the T. solium metacestode (TsCL-1) and characterized the biochemical properties of the recombinant enzyme. The cloned cDNA of 1216bp encoded 339 amino acids with an approximate molecular weight of 37.6kDa which containing a typical signal peptide sequence (17 amino acids), a pro-domain (106 amino acids), and a mature domain (216 amino acids). Sequence alignments of TsCL-1 showed low sequence similarity of 27.3–44.6 to cathepsin L-like cysteine proteases from other helminth parasites, but the similarity was increased to 35.9–55.0 when compared to mature domains. The bacterially expressed recombinant protein (rTsCL-1) did not show enzyme activity; however, the rTsCL-1 expressed in Pichia pastoris showed typical biochemical characteristics of cysteine proteases. It degraded human immunoglobulin G (IgG) and bovine serum albumin (BSA), but not collagen. Western blot analysis of the rTsCL-1 showed antigenicity against the sera from patients with cysticercosis, sparganosis or fascioliasis, but weak or no antigenicity against the sera from patients with paragonimiasis or clonorchiasis. [Copyright &y& Elsevier]
- Published
- 2006
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28. A membrane-associated metalloprotease of Taenia solium metacestode structurally related to the FACE-1/Ste24p protease family
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Cai, Guo-Bin, Bae, Young-An, Kim, Seon-Hee, Na, Byoung-Kuk, Kim, Tong-Soo, Jiang, Ming-Sen, and Kong, Yoon
- Subjects
- *
TAENIA , *PROTEOLYTIC enzymes , *HYDROLASES , *GENETIC translation - Abstract
Abstract: The CaaX proteases are intimately involved in the post-translational modification of prenylated proteins and play a critical role in the activation/stabilization of membrane-bound or secreted molecules constituting the CAAX protein family. In this study, we have isolated a full-length cDNA putatively encoding a type I CaaX protease of the Taenia solium metacestode (TsM), which an agent causative of human neurocysticercosis. The cDNA, designated TsSte24p, comprised 1,505bp and coded for an open reading frame of 472 amino acids with predicted M r 54.5kDa. This monoexonic TsSte24p gene existed as a single copy within the TsM genome and constantly expressed in the parasite from metacestode to adult stages. The TsSte24p exhibited the typical CaaX protease topology, including seven transmembrane domains and a metalloprotease segment with a zinc-binding motif. It shared a significant degree of sequence identity with the type I CaaX proteases such as Saccharomyces cerevisiae Ste24p and Caenorhabditis elegans CeFACE-1. A comparative phylogenetic analysis demonstrated that this protein family is tightly conserved across taxa, from bacteria to mammals. The bacterially expressed recombinant TsSte24p showed proteolytic activity, with an optimal pH of 7.5. The enzyme activity was significantly inhibited by EDTA. Its activity was increased in the presence of low concentrations of the Zn2+(0.001–0.01mM); but was reversibly down-regulated at high doses (over 0.1mM). The native TsSte24p appeared to function as a homodimer, the subunits of which were linked to each other via covalent disulfide bond. The protein was localized in the bladder wall and scolex with differential patterns of distribution. Our results indicated that TsSte24p is a zinc-dependent metalloprotease, which belongs to the FACE-1/Ste24p protease family. [Copyright &y& Elsevier]
- Published
- 2006
- Full Text
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29. Molecular characterization of two genotypes of mumps virus circulated in Korea during 1998–2001
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Lee, Joo-Yeon, Kim, Yoon-Young, Shin, Gu-Choul, Na, Byoung-Kuk, Lee, Jin-Soo, Lee, Ho-Dong, Kim, Jee-Hee, Kim, Woo-Joo, Kim, Joon, Kang, Chun, and Cho, Hae-Wol
- Subjects
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NEURAMINIDASE , *GENES , *MUMPS , *NUCLEOTIDES - Abstract
Sequence analyses of the entire small hydrophobic (SH) and hemagglutinin-neuraminidase (HN) genes of mumps viruses circulated in Korea from 1998 to 2001 showed that these isolates were grouped into two genotypes, H and I. While genotype I was predominant throughout the country during this period, genotype H was found in the restricted region, 1999. The nucleotide and deduced amino acid sequences of Korean isolates showed the type-specific changes including the signature motif at positions 28–30 in the SH gene and the neutralizing epitopes in the HN gene. Particularly, Asian strains including Korean isolates and European strains differed from 2.3 to 3.8% at the nucleotide sequence level in the SH gene although they belonged to the same genotype H. Furthermore, none of Korean isolates were genetically related to the vaccine strains used in Korea. The results provide important information to understand the epidemiology of mumps infection and to facilitate the development of more efficient vaccine program in Korea. [Copyright &y& Elsevier]
- Published
- 2003
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30. Genetic diversity and natural selection of transmission-blocking vaccine candidate antigens Pvs25 and Pvs28 in Plasmodium vivax Myanmar isolates.
- Author
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Lê, Hương Giang, Kang, Jung-Mi, Jun, Hojong, Lee, Jinyoung, Moe, Mya, Thái, Thị Lam, Lin, Khin, Myint, Moe Kyaw, Yoo, Won Gi, Sohn, Woon-Mok, Kim, Tong-Soo, and Na, Byoung-Kuk
- Subjects
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PLASMODIUM vivax , *ANTIGENS , *GENETIC polymorphisms , *VACCINES , *AMINO acids , *NATURAL selection , *MALARIA - Abstract
• Limited genetic polymorphisms were identified in Myanmar Pvs25 and Pvs28, but novel amino acid substitutions were identified. • Global Pvs25 and Pvs28 were under natural selection. • Substantial geographical difference was found between the Asian and American/African Pvs25 and Pvs28. Transmission-blocking vaccines (TBVs) target the sexual stages of malarial parasites to interrupt or reduce the transmission cycle have been one of approaches to control malaria. Pvs25 and Pvs28 are the leading candidate antigens of TBVs against vivax malaria. In this study, genetic diversity and natural selection of the two TBV candidate genes in Plasmodium vivax Myanmar isolates were analyzed. The 62 Myanmar P. vivax isolates showed 9 and 19 different haplotypes for Pvs25 and Pvs28, respectively. The nucleotide diversity of Pvs28 was slightly higher than Pvs25, but not significant. Most amino acid substitutions observed in Myanmar Pvs25 and Pvs28 were concentrated at the EGF-2 and EGF-3 like domains. Major amino acid changes found in Myanmar Pvs25 and Pvs28 were similar to those reported in the global population, but novel amino acid substitutions were also identified. Negative selection was predicted in Myanmar Pvs25, whereas Pvs28 was under positive selection. Comparative analysis of global Pvs25 and Pvs28 suggests a substantial geographical difference between the Asian and American/African Pvs25 and Pvs28. The geographical genetic differentiation and the evidence for natural selection in global Pvs25 and Pvs28 suggest that the functional consequences of the observed polymorphism need to be considered for the development of effective TBVs based on the antigens. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
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