1. Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae
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João Leodato Nunes Maciel, Pierre Gladieux, Timothy Stitt, Paulo Cezar Ceresini, Nicholas J. Talbot, Nicola M. Cook, Dipali Rani Gupta, Moin U. Salam, Sébastien Ravel, Pallab Bhattacharjee, Daniel Croll, M. Golam Mahboob, Vanina Lilián Castroagudín, Tofazzal Islam, Daniel Swan, Md. Mahbubur Rahman, Juliana Teodora de Assis Reges, Md. Shaid Hossain, Antonio NhaniJúnior, Ronny Kellner, Musrat Zahan Surovy, Bruce A. McDonald, Darren M. Soanes, Antoine Persoons, Vanessa Bueno Sancho, Joe Win, Elisabeth Fournier, Sophien Kamoun, Marc-Henri Lebrun, Didier Tharreau, Diane G. O. Saunders, Islam, M. Tofazzal, Bangladesh Agricultural University, Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), Biologie et Génétique des Interactions Plante-Parasite (UMR BGPI), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), University of Exeter, BBSRC Earlham Institute, Partenaires INRAE, Bandaglesh Agricultura Research Institute, Government of Western Australia, Empresa Brasileira de Pesquisa Agropecuária (Embrapa), Ministério da Agricultura, Pecuária e Abastecimento [Brasil] (MAPA), Governo do Brasil-Governo do Brasil, Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University (UNESP), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Norwich Research Park, Max Planck Institute for Plant Breeding Research (MPIPZ), BIOlogie et GEstion des Risques en agriculture (BIOGER), Institut National de la Recherche Agronomique (INRA)-AgroParisTech, BBSRC John Innes Centre, World Bank under HEQEP : CP 2071, BBSRC fellowship in computational biology award, Brazilian National Council for Scientific and Technological Development - CNPq : Pq-2, 307295/2015-0, Sao Paulo Research Foundation - FAPESP : 2014/25904-2, 2013/10655-4, 2014/25904-2, Gatsby Charitable Foundation, BBSRC, NBI Computing infrastructure for Science (CiS) group, Bangabandhu Sheikh Mujibur Rahman Agricultural University, Plant Pathology, UMR 385 Biologie et génétique des interactions plantes-pathogènes BGPI, College of Life and Environmental Sciences, Earlham Institute, Argo-Environmental Remote Sensing and Modeling Lab, Directorate of Grains Industry, Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA), Universidade Estadual Paulista (Unesp), The Sainsbury Laboratory, Max Planck Institute for Plant Breeding Research, UMR 1290 Biologie et Gestion des Risques en agriculture BIOGER, John Innes Centre, Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Département Systèmes Biologiques (Cirad-BIOS), M. TOFAZZAL ISLAM, BANGABANDHU SHEIKH MUJIBUR RAHMAN AGRICULTURAL UNIVERSITY, BANGLADESH, DANIEL CROLL, PIERRE GLADIEUX, DARREN M. SOANES, ANTOINE PERSOONS, PALLAB BHATTACHARJEE, SHAID HOSSAIN, DIPALI RANI GUPTA, MAHBUBUR RAHMAN, GOLAM MAHBOOB, NICOLA COOK, MOIN U. SALAM, MUSRAT ZAHAN SUROVY, VANESSA BUENO SANCHO, JOAO LEODATO NUNES MACIEL, CNPT, ANTONIO NHANI JUNIOR, CNPT, VANINA LILIÁN CASTROAGUDÍN, JULIANA T. DE ASSIS REGES, PAULO CEZAR CERESINI, SEBASTIEN RAVEL, RONNY KELLNER, ELISABETH FOURNIER, DIDIER THARREAU, MARC-HENRI LEBRUN, BRUCE A. MCDONALD, TIMOTHY STITT, DANIEL SWAN, NICHOLAS J. TALBOT, DIANE G. O. SAUNDERS, JOE WIN, and SOPHIEN KAMOUN.
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0106 biological sciences ,Veterinary medicine ,Magnaporthe ,0211 other engineering and technologies ,Plant Science ,02 engineering and technology ,01 natural sciences ,magnaporthe oryzae ,Population genomics ,education.field_of_study ,Vegetal Biology ,wheat blast ,Doença fúngica ,food and beverages ,3. Good health ,Épidémiologie ,Fungal disease ,phylogenomic analysis ,Arroz ,South american ,General Agricultural and Biological Sciences ,Lineage (genetic) ,Oryza sativa ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Wheat blast ,Surveillance épidémiologique ,education ,Ecology, Evolution, Behavior and Systematics ,Plant Diseases ,H20 - Maladies des plantes ,Oryza Sativa ,Outbreak ,Phytopathologie et phytopharmacie ,Biotechnology ,[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy ,field pathogenomics ,Eleusine indica ,030104 developmental biology ,Biologie végétale ,Developmental Biology ,0301 basic medicine ,Phylogénie ,Physiology ,[SDV]Life Sciences [q-bio] ,010501 environmental sciences ,Rice ,maladie fongique ,Génétique des populations ,Structural Biology ,Gene Expression Regulation, Plant ,Triticum ,2. Zero hunger ,Agricultural and Biological Sciences(all) ,021107 urban & regional planning ,Plant disease ,Provenance ,bangladesh ,protection des cultures ,Capim Pé de Galinha ,Research Article ,Distribution géographique ,Phytopathology and phytopharmacy ,Population ,Fungus ,Biology ,Fungal diseases of plants ,génomique ,Surveillance des cultures ,[SDV.BV]Life Sciences [q-bio]/Vegetal Biology ,0105 earth and related environmental sciences ,business.industry ,Biochemistry, Genetics and Molecular Biology(all) ,Transcription génique ,Field pathogenomics ,Cell Biology ,biology.organism_classification ,Phylogenomic analysis ,Magnaporthe oryzae ,Brusone ,Enquête pathologique ,business ,010606 plant biology & botany - Abstract
Made available in DSpace on 2018-12-11T17:06:11Z (GMT). No. of bitstreams: 0 Previous issue date: 2016-10-03 Background: In February 2016, a new fungal disease was spotted in wheat fields across eight districts in Bangladesh. The epidemic spread to an estimated 15,000 hectares, about 16% of the cultivated wheat area in Bangladesh, with yield losses reaching up to 100%. Within weeks of the onset of the epidemic, we performed transcriptome sequencing of symptomatic leaf samples collected directly from Bangladeshi fields. Results: Reinoculation of seedlings with strains isolated from infected wheat grains showed wheat blast symptoms on leaves of wheat but not rice. Our phylogenomic and population genomic analyses revealed that the wheat blast outbreak in Bangladesh was most likely caused by a wheat-infecting South American lineage of the blast fungus Magnaporthe oryzae. Conclusion: Our findings suggest that genomic surveillance can be rapidly applied to monitor plant disease outbreaks and provide valuable information regarding the identity and origin of the infectious agent. Bangabandhu Sheikh Mujibur Rahman Agricultural University Department of Biotechnology Institute of Integrative Biology ETH Zurich Plant Pathology INRA UMR 385 Biologie et génétique des interactions plantes-pathogènes BGPI University of Exeter College of Life and Environmental Sciences Norwich Research Park Earlham Institute Bangladesh Agricultural Research Institute Argo-Environmental Remote Sensing and Modeling Lab, Joydebpur 1701 Directorate of Grains Industry Department of Agriculture and Food Western Australia (DAFWA), 3 Baron-Hay Court Brazilian Agricultural Research Enterprise - EMBRAPA Wheat/Trigo University of São Paulo State - UNESP Department of Crop Protection Rural Engineering and Soil Science, IlhaSolteira Campus CIRAD UMR 385 Biologie et génétique des interactions plantes-pathogènes BGPI Norwich Research Park The Sainsbury Laboratory Max Planck Institute for Plant Breeding Research, Carl-von-Linné-Weg 10 INRA UMR 1290 Biologie et Gestion des Risques en agriculture BIOGER Norwich Research Park John Innes Centre University of São Paulo State - UNESP Department of Crop Protection Rural Engineering and Soil Science, IlhaSolteira Campus
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- 2016