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Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae

Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae

Authors :
João Leodato Nunes Maciel
Pierre Gladieux
Timothy Stitt
Paulo Cezar Ceresini
Nicholas J. Talbot
Nicola M. Cook
Dipali Rani Gupta
Moin U. Salam
Sébastien Ravel
Pallab Bhattacharjee
Daniel Croll
M. Golam Mahboob
Vanina Lilián Castroagudín
Tofazzal Islam
Daniel Swan
Md. Mahbubur Rahman
Juliana Teodora de Assis Reges
Md. Shaid Hossain
Antonio NhaniJúnior
Ronny Kellner
Musrat Zahan Surovy
Bruce A. McDonald
Darren M. Soanes
Antoine Persoons
Vanessa Bueno Sancho
Joe Win
Elisabeth Fournier
Sophien Kamoun
Marc-Henri Lebrun
Didier Tharreau
Diane G. O. Saunders
Islam, M. Tofazzal
Bangladesh Agricultural University
Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich)
Biologie et Génétique des Interactions Plante-Parasite (UMR BGPI)
Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut National de la Recherche Agronomique (INRA)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)
Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)
University of Exeter
BBSRC Earlham Institute
Partenaires INRAE
Bandaglesh Agricultura Research Institute
Government of Western Australia
Empresa Brasileira de Pesquisa Agropecuária (Embrapa)
Ministério da Agricultura, Pecuária e Abastecimento [Brasil] (MAPA)
Governo do Brasil-Governo do Brasil
Universidade Estadual Paulista Júlio de Mesquita Filho = São Paulo State University (UNESP)
Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)
Norwich Research Park
Max Planck Institute for Plant Breeding Research (MPIPZ)
BIOlogie et GEstion des Risques en agriculture (BIOGER)
Institut National de la Recherche Agronomique (INRA)-AgroParisTech
BBSRC John Innes Centre
World Bank under HEQEP : CP 2071
BBSRC fellowship in computational biology award
Brazilian National Council for Scientific and Technological Development - CNPq : Pq-2, 307295/2015-0
Sao Paulo Research Foundation - FAPESP : 2014/25904-2
2013/10655-4
2014/25904-2
Gatsby Charitable Foundation
BBSRC
NBI Computing infrastructure for Science (CiS) group
Bangabandhu Sheikh Mujibur Rahman Agricultural University
Plant Pathology
UMR 385 Biologie et génétique des interactions plantes-pathogènes BGPI
College of Life and Environmental Sciences
Earlham Institute
Argo-Environmental Remote Sensing and Modeling Lab
Directorate of Grains Industry
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
Universidade Estadual Paulista (Unesp)
The Sainsbury Laboratory
Max Planck Institute for Plant Breeding Research
UMR 1290 Biologie et Gestion des Risques en agriculture BIOGER
John Innes Centre
Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro)
Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
Département Systèmes Biologiques (Cirad-BIOS)
M. TOFAZZAL ISLAM, BANGABANDHU SHEIKH MUJIBUR RAHMAN AGRICULTURAL UNIVERSITY, BANGLADESH
DANIEL CROLL
PIERRE GLADIEUX
DARREN M. SOANES
ANTOINE PERSOONS
PALLAB BHATTACHARJEE
SHAID HOSSAIN
DIPALI RANI GUPTA
MAHBUBUR RAHMAN
GOLAM MAHBOOB
NICOLA COOK
MOIN U. SALAM
MUSRAT ZAHAN SUROVY
VANESSA BUENO SANCHO
JOAO LEODATO NUNES MACIEL, CNPT
ANTONIO NHANI JUNIOR, CNPT
VANINA LILIÁN CASTROAGUDÍN
JULIANA T. DE ASSIS REGES
PAULO CEZAR CERESINI
SEBASTIEN RAVEL
RONNY KELLNER
ELISABETH FOURNIER
DIDIER THARREAU
MARC-HENRI LEBRUN
BRUCE A. MCDONALD
TIMOTHY STITT
DANIEL SWAN
NICHOLAS J. TALBOT
DIANE G. O. SAUNDERS
JOE WIN
SOPHIEN KAMOUN.
Source :
BMC Biology, 14, Bmc Biology (14), 1-11. (2016), BMC Biology, BMC Biology, BioMed Central, 2016, 14, pp.1-11. ⟨10.1186/s12915-016-0309-7⟩, Scopus, Repositório Institucional da UNESP, Universidade Estadual Paulista (UNESP), instacron:UNESP, Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA-Alice), Empresa Brasileira de Pesquisa Agropecuária (Embrapa), instacron:EMBRAPA
Publication Year :
2016
Publisher :
BioMed Central, 2016.

Abstract

Made available in DSpace on 2018-12-11T17:06:11Z (GMT). No. of bitstreams: 0 Previous issue date: 2016-10-03 Background: In February 2016, a new fungal disease was spotted in wheat fields across eight districts in Bangladesh. The epidemic spread to an estimated 15,000 hectares, about 16% of the cultivated wheat area in Bangladesh, with yield losses reaching up to 100%. Within weeks of the onset of the epidemic, we performed transcriptome sequencing of symptomatic leaf samples collected directly from Bangladeshi fields. Results: Reinoculation of seedlings with strains isolated from infected wheat grains showed wheat blast symptoms on leaves of wheat but not rice. Our phylogenomic and population genomic analyses revealed that the wheat blast outbreak in Bangladesh was most likely caused by a wheat-infecting South American lineage of the blast fungus Magnaporthe oryzae. Conclusion: Our findings suggest that genomic surveillance can be rapidly applied to monitor plant disease outbreaks and provide valuable information regarding the identity and origin of the infectious agent. Bangabandhu Sheikh Mujibur Rahman Agricultural University Department of Biotechnology Institute of Integrative Biology ETH Zurich Plant Pathology INRA UMR 385 Biologie et génétique des interactions plantes-pathogènes BGPI University of Exeter College of Life and Environmental Sciences Norwich Research Park Earlham Institute Bangladesh Agricultural Research Institute Argo-Environmental Remote Sensing and Modeling Lab, Joydebpur 1701 Directorate of Grains Industry Department of Agriculture and Food Western Australia (DAFWA), 3 Baron-Hay Court Brazilian Agricultural Research Enterprise - EMBRAPA Wheat/Trigo University of São Paulo State - UNESP Department of Crop Protection Rural Engineering and Soil Science, IlhaSolteira Campus CIRAD UMR 385 Biologie et génétique des interactions plantes-pathogènes BGPI Norwich Research Park The Sainsbury Laboratory Max Planck Institute for Plant Breeding Research, Carl-von-Linné-Weg 10 INRA UMR 1290 Biologie et Gestion des Risques en agriculture BIOGER Norwich Research Park John Innes Centre University of São Paulo State - UNESP Department of Crop Protection Rural Engineering and Soil Science, IlhaSolteira Campus

Subjects

Subjects :
0106 biological sciences
Veterinary medicine
Magnaporthe
0211 other engineering and technologies
Plant Science
02 engineering and technology
01 natural sciences
magnaporthe oryzae
Population genomics
education.field_of_study
Vegetal Biology
wheat blast
Doença fúngica
food and beverages
3. Good health
Épidémiologie
Fungal disease
phylogenomic analysis
Arroz
South american
General Agricultural and Biological Sciences
Lineage (genetic)
Oryza sativa
General Biochemistry, Genetics and Molecular Biology
03 medical and health sciences
Wheat blast
Surveillance épidémiologique
education
Ecology, Evolution, Behavior and Systematics
Plant Diseases
H20 - Maladies des plantes
Oryza Sativa
Outbreak
Phytopathologie et phytopharmacie
Biotechnology
[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacy
field pathogenomics
Eleusine indica
030104 developmental biology
Biologie végétale
Developmental Biology
0301 basic medicine
Phylogénie
Physiology
[SDV]Life Sciences [q-bio]
010501 environmental sciences
Rice
maladie fongique
Génétique des populations
Structural Biology
Gene Expression Regulation, Plant
Triticum
2. Zero hunger
Agricultural and Biological Sciences(all)
021107 urban & regional planning
Plant disease
Provenance
bangladesh
protection des cultures
Capim Pé de Galinha
Research Article
Distribution géographique
Phytopathology and phytopharmacy
Population
Fungus
Biology
Fungal diseases of plants
génomique
Surveillance des cultures
[SDV.BV]Life Sciences [q-bio]/Vegetal Biology
0105 earth and related environmental sciences
business.industry
Biochemistry, Genetics and Molecular Biology(all)
Transcription génique
Field pathogenomics
Cell Biology
biology.organism_classification
Phylogenomic analysis
Magnaporthe oryzae
Brusone
Enquête pathologique
business
010606 plant biology & botany

Details

Language :
English
ISSN :
17417007
Database :
OpenAIRE
Journal :
BMC Biology, 14, Bmc Biology (14), 1-11. (2016), BMC Biology, BMC Biology, BioMed Central, 2016, 14, pp.1-11. ⟨10.1186/s12915-016-0309-7⟩, Scopus, Repositório Institucional da UNESP, Universidade Estadual Paulista (UNESP), instacron:UNESP, Repositório Institucional da EMBRAPA (Repository Open Access to Scientific Information from EMBRAPA-Alice), Empresa Brasileira de Pesquisa Agropecuária (Embrapa), instacron:EMBRAPA
Accession number :
edsair.doi.dedup.....9db24b35de20fd4d79a3b304ea03fd21
Full Text :
https://doi.org/10.1186/s12915-016-0309-7⟩