7,875 results on '"indole alkaloids"'
Search Results
2. Indole alkaloids from marine resources: Understandings from therapeutic point of view to treat cancers
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Islam, Fahadul, Dehbia, Zerrouki, Zehravi, Mehrukh, Das, Rajib, Sivakumar, M., Krishnan, Karthickeyan, Billah, Abdul Ajeed Mohathasim, Bose, Bharadhan, Ghosh, Avoy, Paul, Shyamjit, Nainu, Firzan, Ahmad, Irfan, and Emran, Talha Bin
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- 2023
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3. Chemical constituents from Melodinus axillaris W. T. Wang and their chemotaxonomic significance
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Cui, Qi-Min, Cui, Xiao-Yan, Teng, Si-Fan, He, Shu-Yue, Liu, Ya-Ping, and Cheng, Gui-Guang
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- 2022
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4. Total Synthesis of (±)‐Baphicacanthcusine A Enabled by Sequential Ring Contractions
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Sinclair, Paul P and Sarpong, Richmond
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Organic Chemistry ,Chemical Sciences ,Generic health relevance ,Stereoisomerism ,Cyclization ,Oxidation-Reduction ,Biological Products ,Molecular Structure ,Indoles ,Indole Alkaloids ,alkaloids ,oxidations ,rearrangements ,ring contractions ,total synthesis ,Chemical sciences - Abstract
Reported herein is the first total synthesis of the poly-pseudoindoxyl natural product baphicacanthcusine A. The synthesis leverages the oxidative rearrangement of indoles to pseudoindoxyls to install vicinal pseudoindoxyl heterocycles in a diastereoselective manner. Key steps include an acid-mediated cyclization/indole transposition, two diastereoselective oxidative ring contractions, and a site-selective C-H oxygenation. The synthesis of the oxidation precursors was guided by recognition of an element of hidden symmetry. This work provides a foundation for the chemical synthesis of other poly-pseudoindoxyl alkaloids.
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- 2024
5. A new indole alkaloid from Cladosporium sp. SCSIO41205.
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Tie, Qingqing, Wang, Mengqin, Huang, Xiaowen, Chen, Ying, Liu, Yonghong, Yang, Bin, and Li, Yunqiu
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INDOLE alkaloids ,INDOLE compounds ,CLADOSPORIUM ,ACETAMIDE - Abstract
A new indole compound, N-hydroxy-N-(2-(1-hydroxy-2-methoxy-1H-indol-3-yl)ethyl acetamide (1), together with four known compounds, N-(2-(1H-indol-3-yl)ethylacetamide (2), N-acetylamicoumacin C (3), N-(2-phenylethyl)acetamide (4), and (2 R,3S)-1-(4-hydroxyphenyl)butane-2,3-diol (5) were isolated from Cladosporium sp. SCSIO41205. Their structures were established by detailed analysis of the NMR and HR-ESI-MS data. [ABSTRACT FROM AUTHOR]
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- 2025
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6. Monoterpene indole alkaloids from Gelsemium elegans.
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Wei, Quan-Hao, Zhang, Jin-Ping, Lu, Zhi-Yuan, Jia, Xian-Hui, Zhao, Xiao-Dong, Wang, Zhi-Wei, and Wang, Xiao-Jing
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INDOLE alkaloids ,NUCLEAR magnetic resonance spectroscopy ,CIRCULAR dichroism ,CELL proliferation ,MONOTERPENOIDS - Abstract
Two new monoterpene indole alkaloids, Eleganine A (1) and Eleganine B (2), along with 11 known compounds (3-13) were isolated from the stems and leaves of Gelsemium elegans. Compound 1 is a gelsenicine-related monoterpenoid indole alkaloid possessing an iridoid unit. Their structures and absolute configurations of 1-2 were established by UV, IR, HR-ESI-MS, NMR spectroscopy, and electronic circular dichroism data analyses. All isolated compounds were evaluated for their anti-inflammatory and inhibiting glucose-induced mesanginal cell proliferation activities. None of them showed activity with IC
50 far beyond 50 μM. [ABSTRACT FROM AUTHOR]- Published
- 2025
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7. Experimental and Computational NMR Studies of Large Alkaloids Exemplified With Vindoline Trimer: Advantages and Limitations.
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Semenov, Valentin A., Zinchenko, Sergey V., Massiot, Georges, and Krivdin, Leonid B.
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DISTRIBUTION (Probability theory) , *INDOLE alkaloids , *CONFORMATIONAL analysis , *QUANTUM computing , *STEREOCHEMISTRY - Abstract
ABSTRACT The complete 1H and 13C NMR assignments of a trimeric vindoline together with its individual components, dimeric vindolicine and monomeric vindoline, are performed based on a thorough analysis of the ROESY, COSY, HSQC, and HMBC spectra in combination with the state‐of‐the‐art quantum‐chemical calculations. A spatial structure of vindoline trimer is determined by means of computational conformational analysis in combination with the probability distribution map of its basic conformers. On the example of monoterpene indole alkaloid, the trimer vindoline, the present study reveals the power of modern computational NMR to perform identification and stereochemical studies of large natural compounds with some limitations, which may arise in the quantum chemical computing workflow. [ABSTRACT FROM AUTHOR]
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- 2025
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8. Metabolic engineering of Escherichia coli for N-methylserotonin biosynthesis.
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Li, Qingchen, Li, Chenxi, Zhong, Jie, Wang, Yukun, Yang, Qinghua, Wang, Bingmei, He, Wenjin, Huang, Jianzhong, Lin, Shengyuan, and Qi, Feng
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INDOLE alkaloids , *CHEMICAL synthesis , *GENE knockout , *TRANSMETHYLATION , *CHEMICAL plants , *ADENOSYLMETHIONINE - Abstract
N-methylserotonin (NMS) is a valuable indole alkaloid with therapeutic potential for psychiatric and neurological disorders, and it is used in health foods, cosmetics, and weight loss supplements. However, environmental challenges and low reaction efficiencies significantly hinder cost-effective, large-scale production of NMS in plants or through chemical synthesis. Herein, we have successfully engineered Escherichia coli strains to enhance NMS production from L-tryptophan using whole-cell catalysis. We developed multiple biosynthesis pathways incorporating modules for serotonin (5-hydroxytryptamine, 5-HT), tetrahydromonapterin (MH₄), and S-adenosylmethionine (SAM) synthesis. To enhance MH₄ availability, we employed a high-activity Bacillus subtilis FolE and minimized carbon flux loss through targeted gene knockouts in competitive metabolic pathways, improving 5-HT production. Additionally, we constructed a comprehensive SAM biosynthesis module to facilitate transmethylation by a selected N-methyltransferase fused with ProS2. These engineered modules were coexpressed in two plasmids within the optimized strain NMS-19, producing 128.6 mg/L of NMS in a 5-L bioreactor using fed-batch cultivation—a 92-fold increase over the original strain. This study introduces a viable strategy for NMS production and provides insights into the biosynthesis of SAM-dependent methylated tryptamine derivatives. [Display omitted] • A combined strategy was developed for the production of N-methylserotonin. • The availability of MH 4 was enhanced to improve the production of 5-HTP and 5-HT. • A SAM module was constructed for transmethylation by the optimized HsINMT∗. • N-methyltransferase uniquely converts 5-HT to NMS, not to NDMS or NTMS. • The engineered strain NMS-19 produced 128.6 mg/L of NMS in a 5L bioreactor. [ABSTRACT FROM AUTHOR]
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- 2025
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9. Cell‐type‐aware regulatory landscapes governing monoterpene indole alkaloid biosynthesis in the medicinal plant Catharanthus roseus.
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Li, Chenxin, Colinas, Maite, Wood, Joshua C., Vaillancourt, Brieanne, Hamilton, John P., Jones, Sophia L., Caputi, Lorenzo, O'Connor, Sarah E., and Buell, C. Robin
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TRANSCRIPTION factors , *INDOLE alkaloids , *GENE expression , *CATHARANTHUS roseus , *BIOSYNTHESIS - Abstract
Summary: In plants, the biosynthetic pathways of some specialized metabolites are partitioned into specialized or rare cell types, as exemplified by the monoterpenoid indole alkaloid (MIA) pathway of Catharanthus roseus (Madagascar Periwinkle), the source of the anticancer compounds vinblastine and vincristine. In the leaf, the C. roseus MIA biosynthetic pathway is partitioned into three cell types with the final known steps of the pathway expressed in the rare cell type termed idioblast. How cell‐type specificity of MIA biosynthesis is achieved is poorly understood.We generated single‐cell multi‐omics data from C. roseus leaves. Integrating gene expression and chromatin accessibility profiles across single cells, as well as transcription factor (TF)‐binding site profiles, we constructed a cell‐type‐aware gene regulatory network for MIA biosynthesis.We showcased cell‐type‐specific TFs as well as cell‐type‐specific cis‐regulatory elements. Using motif enrichment analysis, co‐expression across cell types, and functional validation approaches, we discovered a novel idioblast‐specific TF (Idioblast MYB1, CrIDM1) that activates expression of late‐stage MIA biosynthetic genes in the idioblast.These analyses not only led to the discovery of the first documented cell‐type‐specific TF that regulates the expression of two idioblast‐specific biosynthetic genes within an idioblast metabolic regulon but also provides insights into cell‐type‐specific metabolic regulation. [ABSTRACT FROM AUTHOR]
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- 2025
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10. Role of RyR2 and SERCA2a in the Cardioprotective Effects of Vincanine and Pyrazoline Alkaloids.
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Zhumaev, Inoyat Zulfiqorovich, Boboev, Sadriddin Nurillo Ugli, Usmanov, Pulat Bekmuratovich, Rustamov, Shavkat Yusubovich, Zaripov, Abdisalim Abdikarimovich, Qurbonova, Shakhnoza Bakhtiyorovna, Mirzaeva, Yulduzkhon Takhirjanovna, Ibragimov, Eldor Bakhtiyor Ugli, Esimbetov, Adilbay Tlepovich, and Adizov, Shahobiddin Mukhammadovich
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INDOLE alkaloids , *SARCOPLASMIC reticulum , *RYANODINE receptors , *MYOCARDIUM , *PAPILLARY muscles - Abstract
In the conducted studies, the effect of vincanine and pyrazoline indole alkaloids on cardiac muscle cell sarcoplasmic reticulum (SR) Ca2+-transport systems (RyR2 and SERCA2a) was investigated under normal and hypoxic conditions. The effect of vincanine and pyrazoline on ryanodine receptor (RyR2) was evaluated in the presence of ruthenium red and it was found that the role of RyR2 in the positive inotropic effect of these alkaloids is small. Also, in the presence of cyclopiazonic acid (IC50 = 5.6 µM), an inhibitor of sarcoplasmic reticulum Ca2+-ATPase (SERCA2a), the positive inotropic effect of vincanine and pyrazoline alkaloids was reduced. In general, the positive inotropic effects and cardioprotective properties of vincanine and pyrazoline alkaloids are mediated by modulation of SERCA2a function. [ABSTRACT FROM AUTHOR]
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- 2025
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11. A new ocotillol-type ginsenoside from American ginseng berry.
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Jin, Yinping, Qu, Zhengyi, Pang, Shifeng, Li, Zheng, Wang, Yingping, and Zhang, Hao
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AMERICAN ginseng ,INDOLE alkaloids ,GINSENOSIDES ,CYTOTOXINS ,ARALIACEAE - Abstract
A new ocotillol-type ginsenoside, named pseudoginsenoside F
12 (1), was isolated from American ginseng berry, whose structure was elucidated as 6-O-[α-L-2,3-epoxy-rhamnopyranosyl-(1-2)-β-D-glucopyranosyl]-dammar-20S,24R-epoxy-3β, 6α,12β,25-tetraol. In addition, the known alkaloids β-carboline-1-carboxylic acid (2) and anoectochine (3) were isolated for the first time from the Araliaceae family. The new compound 1 was evaluated for cytotoxicity against MDA-MB-231 breast cancer cell line. [ABSTRACT FROM AUTHOR]- Published
- 2025
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12. New indole alkaloid Morucolletotricin from endophytic fungus Colletotrichum queenslandicum associated with Morus australis Poir. Leaf.
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Ningsih, Kurnia Nastira and Hakim, Euis Holisotan
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INDOLE alkaloids ,ENDOPHYTIC fungi ,ACETIC acid ,ETHYL acetate ,COLLETOTRICHUM - Abstract
Six compounds were isolated from the ethyl acetate extract of endophytic fungus Colletotrichum queenslandicum derived from Morus australis Poir. leaf. Based on NMR and MS data led to characterised of these compounds including one new indole alkaloid Morucolletotricin (1) along with two other indole alkaloids; tryptopol (2) and indole-3-acetic acid (3), phomopyronol (4), 2-(3-aminophenyl)acetic acid (5) and ergosterol (6). phomopyronol (4) and 2-(3-aminophenyl)acetic acid (5) were first reported from Colletotrichum fungi. The cytotoxic activity of compounds 1-6 was evaluated against murine leukaemia P-388 cells and showed that all compounds were moderate cytotoxic. phomopyronol (4) was the most active among the five other compounds with IC
50 = 37.17 μg/mL. [ABSTRACT FROM AUTHOR]- Published
- 2025
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13. Three-component diels-alder reaction through palladium carbene migratory insertion enabled dearomative C(sp3)-H bond activation.
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Mi, Yiman, Liu, Shuoyue, Hu, Lingfei, Wang, Yihua, Luo, Renhui, Yu, Yinghua, Zhang, Zhiyang, Yuan, Shan, Lu, Gang, and Huang, Xueliang
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MIGRATION reactions (Chemistry) ,INDOLE alkaloids ,ARYL halides ,CARBAZOLE derivatives ,DIELS-Alder reaction - Abstract
Owning to the versatile nature in participation of Diels-Alder (D-A) reactions, the development of efficient approaches to generate active ortho-quinodimethanes (o-QDMs) has gained much attention. However, a catalytic method involving coupling of two readily accessible components to construct o-QDMs is lacking. Herein, we describe a palladium carbene migratory insertion enabled dearomative C(sp
3 )-H activation to form active o-QDM species through the cross-coupling of N-tosylhydrazones with aryl halides. The in situ generated o-QDM intermediates were trapped efficiently by 3-nitroindoles and N-sulfonylaldimines to provide dihydroindolo[2,3-b]carbazole derivatives and indole alkaloids modularly. To our knowledge, this reaction represents a rare example on three-component D-A cycloaddition through in situ generation of conjugated dienes by the coupling two readily available materials. We anticipate such a reaction mode could find broad application on diversity oriented six-membered ring construction. Deuterium labeling experiments and density functional theory calculations support a pathway through reversible C(sp3 )-H activation to generate heterocyclic o-QDMs. A catalytic method involving coupling of two readily accessible components to construct ortho-quinodimethanes (o-QDMs) is lacking. Herein, the authors describe a palladium carbene migratory insertion enabled dearomative C(sp3)-H activation to form active o-QDM species through the cross-coupling of N-tosylhydrazones with aryl halides. [ABSTRACT FROM AUTHOR]- Published
- 2024
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14. Endophytic fungi: nature's solution for antimicrobial resistance and sustainable agriculture.
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Nazir, Asiya, Puthuveettil, Abdul R., Hussain, Fathima Hasnain Nadeem, Hamed, Khalid E., and Munawar, Nayla
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ENDOPHYTIC fungi ,INDOLE alkaloids ,FUMARATES ,SUSTAINABLE agriculture ,METABOLITES - Abstract
The growing threat of antimicrobial resistance (AMR) has underlined the need for a sustained supply of novel antimicrobial agents. Endophyte microorganism that reside within plant tissues as symbionts have been the source of potential antimicrobial substances. However, many novel and potent antimicrobials are yet to be discovered from these endophytes. The present study investigates the potential of endophytic fungi as a source of novel bioactive chemicals with antibacterial capabilities. These fungi synthesize secondary metabolites such as polyketides and peptides via polyketide synthase (PKS) and nonribosomal peptide synthetase (NRPS) pathways. Notable substances, like prenylated indole alkaloids and fumaric acid, have shown promising antibacterial and antifungal properties against multidrug-resistant infectious agents. This review also emphasizes the symbiotic link between endophytes and their host plants, which is critical for secondary metabolite production. The study focuses on the significance of isolation methods for endophytes and proposes their use in for sustainable agriculture, bioremediation, and medicine. Future research combining endophytic biodiversity analysis with next-generation sequencing (NGS) and nanotechnology could provide novel techniques for combating AMR and contributing to sustainability across multiple industries. [ABSTRACT FROM AUTHOR]
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- 2024
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15. Transcriptional Reprogramming Deploys a Compartmentalized ‘Timebomb’ in Catharanthus roseus to Fend Off Chewing Herbivores.
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Liu, Yongliang, Shi, Jizhe, Patra, Barunava, Singh, Sanjay Kumar, Wu, Xia, Lyu, Ruiqing, Liu, Xiaoyu, Li, Yongqing, Wang, Ying, Zhou, Xuguo, Pattanaik, Sitakanta, and Yuan, Ling
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INDOLE alkaloids , *TRANSCRIPTION factors , *CATHARANTHUS roseus , *INSECT-plant relationships , *HIERARCHICAL clustering (Cluster analysis) - Abstract
ABSTRACT The evolutionary arms race between plants and insects has led to key adaptive innovations that drive diversification. Alkaloids are well‐documented anti‐herbivory compounds in plant chemical defences, but how these specialized metabolites are allocated to cope with both biotic and abiotic stresses concomitantly is largely unknown. To examine how plants prioritize their metabolic resources responding to herbivory and cold, we integrated dietary toxicity bioassay in insects with co‐expression analysis, hierarchical clustering, promoter assay, and protein–protein interaction in plants.
Catharanthus roseus , a medicinal plant known for its insecticidal property against chewing herbivores, produces two terpenoid indole alkaloid monomers, vindoline and catharanthine. Individually, they exhibited negligible toxicity againstManduca sexta , a chewing herbivore; their condensed product, anhydrovinblastine; however, was highly toxic. Such a unique insecticidal mode of action demonstrates that terpenoid indole alkaloid ‘timebomb’ can only be activated when the two spatially isolated monomeric precursors are dimerized by herbivory. Without initial selection pressure and apparent fitness costs, this adaptive chemical defence against herbivory is innovative and sustainable. The biosynthesis of insecticidal terpenoid indole alkaloids is induced by herbivory but suppressed by cold. Here, we identified a transcription factor, herbivore‐induced vindoline‐gene Expression (HIVE), that coordinates the production of terpenoid indole alkaloids in response to herbivory and cold stress. The HIVE‐mediated transcriptional reprogramming allows this herbaceous perennial to allocate its metabolic resources for chemical defence at a normal temperature when herbivory pressure is high, but switches to cold tolerance under a cooler temperature when insect infestation is secondary. [ABSTRACT FROM AUTHOR]- Published
- 2024
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16. Oxidation of four monoterpenoid indole alkaloid classes by three cytochrome P450 monooxygenases from Tabernaemontana litoralis.
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Mai, Zhan, Kim, Kyunghee, Richardson, Matthew Bailey, Deschênes, Daniel André Ramey, Garza‐Garcia, Jorge Jonathan Oswaldo, Shahsavarani, Mohammadamin, Perley, Jacob Owen, Njoku, Destiny Ichechi, Deslongchamps, Ghislain, De Luca, Vincenzo, and Qu, Yang
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INDOLE alkaloids , *CATHARANTHUS roseus , *CYTOCHROME P-450 , *MONOTERPENOIDS , *TABERNAEMONTANA - Abstract
SUMMARY: Cytochrome P450 monooxygenases (CYPs) are well known for their ability to catalyze diverse oxidation reactions, playing a significant role in the biosynthesis of various natural products. In the realm of monoterpenoid indole alkaloids (MIAs), one of the largest groups of alkaloids in nature, CYPs are integral to reactions such as hydroxylation, epoxidation, ring opening, ring rearrangement, and aromatization, contributing to the extensive diversification of these compounds. In this study, we investigate the transcriptome, metabolome, and MIA biosynthesis in Tabernaemontana litoralis (milky way tree), a prolific producer of rare pseudoaspidosperma‐type MIAs. Alongside known pseudoaspidosperma biosynthetic genes, we identify and characterize three new CYPs that facilitate regio‐ and stereospecific oxidation of four MIA skeletons: iboga, aspidosperma, pseudoaspidosperma, and quebrachamine. Notably, the tabersonine 14,15‐β‐epoxidase catalyzes the formation of pachysiphine, the stereoisomer of 14,15‐α‐epoxytabersonine (lochnericine) found in Catharanthus roseus (Madagascar periwinkle) roots. The pseudovincadifformine 18‐hydroxylase is the first CYP identified to modify a pseudoaspidosperma skeleton. Additionally, we demonstrate that the enzyme responsible for C10‐hydroxylation of the iboga MIA coronaridine also catalyzes C10‐hydroxylation of voaphylline, which bears a quebrachamine skeleton. With the discovery of a new MIA, 11‐hydroxypseudovincadifformine, this study provides a comprehensive understanding of MIA biosynthesis and diversification in T. litoralis, highlighting its potential for further exploration. Significance Statement: New cytochrome P450 monooxygenases (CYP) from Tabernaemontana litoralis can oxidize four different monoterpenoid indole alkaloid (MIA) skeletons, including the rare pseudovincadifformine alkaloid. Our discovery highlights the remarkable versatility of CYP enzymes as catalysts in the biosynthesis of natural products. Such flexibility is a key factor driving the structural diversity of medicinal MIAs, which encompass over 3000 unique structures and hold significant potential for therapeutic development. [ABSTRACT FROM AUTHOR]
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- 2024
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17. Computation‐Guided Scope Exploration of a Conjugate Addition/Truce‐Smiles Cascade Reaction for Scaffold Diversification.
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Horst, Brendan, Gabella Carena, Leopoldo J., Doppert, Michael T., Ham, Rens, Hansen, Thomas, and Ruijter, Eelco
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INDOLE alkaloids , *MOIETIES (Chemistry) , *RING formation (Chemistry) , *SULFUR dioxide , *TEMPERATURE - Abstract
Based on the successful application of a nitroaryl transfer cascade reaction in the total synthesis of various monoterpene indole alkaloids proceeding via fused bicyclic intermediate, we investigated analogous cascade reactions involving spiro, bridged, and alternatively fused bicyclic intermediates. Unfortunately, none of these was found to afford the desired nitroaryl transfer product. DFT studies of the original cascade process revealed that the Truce‐Smiles rearrangement is the rate‐determining step. In addition, we found that the subsequent SO2 extrusion is accompanied by retro‐Mannich ring opening, resulting in a stabilized enolate that only recyclizes after activation of the cyclic imine moiety. Computation of the reaction profiles of the proposed alternative cascade reactions showed that the barrier for the Truce‐Smiles rearrangement is unreasonably high for the bridged and alternatively fused systems, but only moderately higher for the five‐membered spiro system. Reasoning that even more electron‐deficient arenesulfonamides should have a lower barrier for the Truce‐Smiles rearrangement, we synthesized the corresponding 2,4‐dinitrobenzenesulfonamide precursor and found that it indeed smoothly undergoes the nitroaryl transfer cascade at room temperature. In this case, however, the cascade reaction produces a cyclic imine product, as the intermediate 2,4‐dinitrophenyl‐substituted enolate is insufficiently nucleophilic to undergo the Mannich cyclization. [ABSTRACT FROM AUTHOR]
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- 2024
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18. Genome‐based discovery of pachysiphine synthases in Tabernaemontana elegans.
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Lezin, Enzo, Durand, Mickael, Birer Williams, Caroline, Lopez Vazquez, Ana Luisa, Perrot, Thomas, Gautron, Nicolas, Pétrignet, Julien, Cuello, Clément, Jansen, Hans J., Magot, Florent, Szwarc, Sarah, Le Pogam, Pierre, Beniddir, Mehdi A., Koudounas, Konstantinos, Oudin, Audrey, St‐Pierre, Benoit, Giglioli‐Guivarc'h, Nathalie, Sun, Chao, Papon, Nicolas, and Jensen, Michael Krogh
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INDOLE alkaloids , *BIOTECHNOLOGY , *CYTOCHROME P-450 , *HYLIDAE , *TABERNAEMONTANA - Abstract
SUMMARY: Plant‐specialized metabolism represents an inexhaustible source of active molecules, some of which have been used in human health for decades. Among these, monoterpene indole alkaloids (MIAs) include a wide range of valuable compounds with anticancer, antihypertensive, or neuroactive properties. This is particularly the case for the pachysiphine derivatives which show interesting antitumor and anti‐Alzheimer activities but accumulate at very low levels in several Tabernaemontana species. Unfortunately, genome data in Tabernaemontanaceae are lacking and knowledge on the biogenesis of pachysiphine‐related MIAs in planta remains scarce, limiting the prospects for the biotechnological supply of many pachysiphine‐derived biopharmaceuticals. Here, we report a raw version of the toad tree (Tabernaemontana elegans) genome sequence. These new genomic resources led to the identification and characterization of a couple of genes encoding cytochrome P450 with pachysiphine synthase activity. Our phylogenomic and docking analyses highlight the different evolutionary processes that have been recruited to epoxidize the pachysiphine precursor tabersonine at a specific position and in a dedicated orientation, thus enriching our understanding of the diversification and speciation of the MIA metabolism in plants. These gene discoveries also allowed us to engineer the synthesis of MIAs in yeast through the combinatorial association of metabolic enzymes resulting in the tailor‐made synthesis of non‐natural MIAs. Overall, this work represents a step forward for the future supply of pachysiphine‐derived drugs by microbial cell factories. [ABSTRACT FROM AUTHOR]
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- 2024
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19. Volatile organic metabolites to predict clinical response in patients with inflammatory bowel diseases treated with biological therapy.
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RIBALDONE, Davide G., AREZZO, Alberto, CARDENIA, Vladimiro, CAVIGLIA, Gian Paolo, ABATE, Maria L., RADICE, Elisabetta, SARACCO, Giorgio M., ASTEGIANO, Marco, and MORINO, Mario
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INFLAMMATORY bowel diseases , *CROHN'S disease , *CRESOL , *ULCERATIVE colitis , *INDOLE alkaloids - Abstract
BACKGROUND: Variations in faecal volatile organic metabolites (VOMs) are increasingly thought to be indicative of digestive disorders. There are no studies in the literature that evaluated VOMs for inflammatory bowel disease (IBD) treatment response prediction. The assessment of the VOMs' capacity to predict clinical response after a year of adalimumab or vedolizumab therapy was the main goal of our investigation. VOM and IBD clinical characteristic correlations were among the secondary outcomes. METHODS: We sequentially included IBD patients who had indications for biologic treatment as part of a prospective research. RESULTS: We collected fifty IBD patients, and we used gas chromatography/mass spectrometry (GC/MS) to study their feces. Adalimumab was used to treat 31 patients, while vedolizumab was used to treat 19 individuals. After a year of treatment, pre-biologics methyl butyrate could predict clinical response (AUC = 0.68, 95%CI = 0.53-0.81, P=0.02). Age, the length of the disease, gender, or smoking habit had no effect on VOMs. Two VOMs, octenol and, specifically, methyl indole, correlated with greater levels of inflammation markers (CRP and calprotectin, respectively) and were able to differentiate between ulcerative colitis (UC) and Crohn's disease (CD) (AUC = 0.72 and 0.85, respectively). On the other hand, methylbutanal was associated with CD and specifically with ileal location (P=0.01). With an accuracy at least comparable to calprotectin, methyl butanoate could differentiate between active clinical illness and remission (AUC = 0.69 and 0.62, respectively). CONCLUSIONS: Using VOMs to characterize the intestinal metabolome appears to be a viable way to better understand IBD. [ABSTRACT FROM AUTHOR]
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- 2024
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20. Streamlined screening platforms lead to the discovery of pachysiphine synthase from Tabernanthe iboga.
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Kamileen, Mohamed O., Nakamura, Yoko, Luck, Katrin, Heinicke, Sarah, Hong, Benke, Colinas, Maite, Lichman, Benjamin R., and O'Connor, Sarah E.
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PLANT enzymes , *INDOLE alkaloids , *CYTOCHROME P-450 , *CATHARANTHUS roseus , *PLANT products - Abstract
Summary: Plant‐specialized metabolism is largely driven by the oxidative tailoring of key chemical scaffolds catalyzed by cytochrome P450 (CYP450s) enzymes. Monoterpene indole alkaloids (MIAs) tabersonine and pseudo‐tabersonine, found in the medicinal plant Tabernanthe iboga (commonly known as iboga), are tailored with oxidations, and the enzymes involved remain unknown.Here, we developed a streamlined screening strategy to test the activity of T. iboga CYP450s in Nicotiana benthamiana. Using multigene constructs encoding the biosynthesis of tabersonine and pseudo‐tabersonine scaffolds, we aimed to uncover the CYP450s responsible for oxidative transformations in these scaffolds.Our approach identified two T. iboga cytochrome P450 enzymes: pachysiphine synthase (PS) and 16‐hydroxy‐tabersonine synthase (T16H). These enzymes catalyze an epoxidation and site‐specific hydroxylation of tabersonine to produce pachysiphine and 16‐OH‐tabersonine, respectively.This work provides new insights into the biosynthetic pathways of MIAs and underscores the utility of N. benthamiana and Catharanthus roseus as platforms for the functional characterization of plant enzymes. [ABSTRACT FROM AUTHOR]
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- 2024
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21. Kratom Alkaloids: A Blood–Brain Barrier Specific Membrane Permeability Assay-Guided Isolation and Cyclodextrin Complexation Study.
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Dohárszky, András, Vági, Erika Mária, Könczöl, Árpád, Simon, Alexandra, Várnagy, Erzsébet, Muratov, Miras, Steiger, Kristóf István, Várnai, Bianka, Béni, Szabolcs, Riethmüller, Eszter, and Fejős, Ida
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STABILITY constants , *INDOLE alkaloids , *AFFINITY electrophoresis , *CAPILLARY electrophoresis , *CENTRAL nervous system - Abstract
Mitragynine is an "atypic opioid" analgesic with an alternative mechanism of action and a favorable side-effect profile. Our aim was to optimize the alkaloid extraction procedure from kratom leaves and to determine and isolate the most relevant compounds capable of penetrating the central nervous system. The PAMPA-BBB study revealed that mitragynine and its coalkaloids, speciociliatine, speciogynine, and paynantheine, possess excellent in vitro BBB permeability. An optimized sequence of CPC, flash chromatography, and preparative HPLC methods was used to isolate the four identified BBB+ alkaloids. To improve the bioavailability of the isolated alkaloids, their cyclodextrin (CD) complexation behavior was investigated via affinity capillary electrophoresis using almost 40 CD derivatives. The apparent alkaloid–CD complex stability constants were determined and compared, and the most relevant CDs phase-solubility studies were also performed. Both the neutral and negatively charged derivatives were able to form complexes with all four kratom alkaloids. It was found that cavity size, substituent type, and degree of substitution also influenced complex formation. The negatively charged Sugammadex, Subetadex, and the sufoalkylated-beta-CD analogs were able to form the most stable complexes, exceeding 1000 M−1. These results serve as a good basis for further solubility and stability enhancement studies of kratom alkaloids. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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22. Structurally diverse indole alkaloids with cytotoxicity from Lonicera Japonica-associated endophytic fungus Penicillium ochrochloron YT2022-65.
- Author
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Liu, Xingjie, Li, Ruonan, and Zhou, Xiaofei
- Subjects
INDOLE alkaloids ,METABOLITES ,JAPANESE honeysuckle ,CYTOTOXINS ,FUNGAL metabolites ,ENDOPHYTIC fungi - Abstract
Natural products, especially fungal secondary metabolites, have been served as valuable sources of drug leads in pharmaceutical industry. Medicinal plants-associated endophytic fungi possess a well-developed secondary metabolism. In this study, chemical investigation on Penicillium ochrochloron YT2022-65, an endophytic fungus associated with Lonicera Japonica, led to the isolation of six structurally diversified indole alkaloids, including a new one, namely peniochroloid A (1), as well as five previously reported alkaloids, flavonoid B (2), brocaeloid C (3), isoroquefortine C (4), roquefortine C (5), and dihydrocarneamide A (6). Their structures, including the absolute configuration of 1, were determined by a combined analysis of HRESIMS, NMR spectroscopic data, and calculation of the optical rotation. Their cytotoxicity against A549, HepG2, MCF-7, and THP-1 cell lines were evaluated in vitro. The new compound 1 was found to possess considerable cytotoxicity against MCF-7 and THP-1 cell lines with IC
50 values of 10.2 and 11.0 μM, respectively. [ABSTRACT FROM AUTHOR]- Published
- 2024
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23. Deodeokaloid, a New Indole Alkaloid N -Glycoside and Bioactive Phenolic Compounds from the Roots of Codonopsis lanceolata.
- Author
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Cho, Yeo Rang, Hong, Joo-Hyun, Kang, Dong-Min, Ko, Yoon-Joo, Ahn, Mi-Jeong, and Kim, Ki Hyun
- Subjects
ELECTROSPRAY ionization mass spectrometry ,INDOLE alkaloids ,ANALYTICAL chemistry ,PLANT extracts ,CHEMICAL reactions ,CHLOROGENIC acid - Abstract
Codonopsis lanceolata, commonly known as the bonnet bellflower or deodeok, is primarily found in Eastern Asia. Its roots have been used traditionally across Asia to treat various ailments such as bronchitis, coughs, asthma, and inflammation. In our ongoing efforts to discover bioactive natural products, a phytochemical investigation of the n-BuOH fraction of C. lanceolata root extracts led to the isolation and identification of a new indole alkaloid N-glycoside, deodeokaloid (D-indole-3-lactic acid N-β-D-glucopyranoside) (1), alongside known compounds tangshenoside I (2), tangshenoside IV (3), and chlorogenic acid (4) through HPLC purification. The structure of the new compound 1 was elucidated using 1D and 2D NMR spectroscopy and high-resolution electrospray ionization mass spectrometry (HR-ESIMS). Its absolute configuration was determined through a combination of DP4+ probability analysis and chemical reactions. The isolated compounds 1–4 were evaluated for their anti-Helicobacter pylori and antioxidant activities. In the anti-H. pylori assay, compound 3 showed antibacterial activity similar to that of quercetin as the positive control, inhibiting the bacterial growth by 36.8%. Compound 4 exhibited the most potent antioxidant activity, with an ABTS [2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonate)] radical scavenging activity of 1624.7 mmol TE/mol and a DPPH (2,2-diphenyl-1-picrylhydrazyl) radical scavenging capacity of 707.5 mmol Trolox equivalent (TE)/mol. Compounds 2–4 displayed significant intracellular reactive oxygen species (ROS) scavenging capacity in lipopolysaccharide-stimulated RAW 264.7 macrophage cells. This study highlights C. lanceolata roots as a promising natural source of bioactive compounds with potential therapeutic applications. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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24. Haploid‐Phased Chromosomal Telomere‐to‐Telomere Genome Assembly of Medicinal Plant Uncaria rhynchophylla Dissects Genetic Controls on the Biosynthesis of Bioactive Alkaloids.
- Author
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Hu, Tao, Duan, Lei, Shangguan, Liyang, Zhao, Qingshi, Hang, Ye, Wang, Xiaohong, Li, Xue, Yang, Ningxian, Yan, Fulin, Lv, Qiuyu, Tang, Liu, Liu, Miao, Qiang, Wei, Wang, Xincun, Wang, Xuewen, and Zhang, Mingsheng
- Subjects
- *
GENE expression , *INDOLE alkaloids , *RNA interference , *SMALL interfering RNA , *RNA analysis - Abstract
ABSTRACT Natural indole alkaloids provide important medicinal resources and defences to environmental stresses. The
Uncaria genus is a recorded traditional medicinal woody plant with high alkaloids. Genomic insights into alkaloid variation remain elusive. Here, we have dissected the haploid‐resolved chromosomal T2T genome assembly ofUncaria rhynchophylla with a size of ~634 Mb and contig N50 of 27 Mb using PacBio HiFi long‐reads plus Hi‐C reads and anchored the contigs on 22 pairs of confirmed chromosomes. This genome contains 56% repeat sequences and ~29 000 protein‐encoding genes.U. rhynchophylla diverged from a common ancestor shared withCoffea around 20 million years ago and contains expanded and contracted gene families associated with secondary metabolites and defences/resistance to stresses. We constructed the pathway and mined genes for rhynchophylline alkaloid biosynthesis. Fifty‐three alkaloids in this pathway and eight differentially expressed genes are the keys to alkaloid accumulation. Elevated alkaloid levels are driven by high copy numbers of critical genesSTR s andSGR s involved in strictosidine synthesis and hydrolysis as evidenced by phylogenetic, expression and RNA interference analyses. These results advance our genetic understanding and guide further breeding improvements, stress adaptation studies and pharmaceutical development. [ABSTRACT FROM AUTHOR]- Published
- 2024
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25. Metabolic engineering of yeast for de novo production of kratom monoterpene indole alkaloids.
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Holtz, Maxence, Rago, Daniela, Nedermark, Ida, Hansson, Frederik G., Lehka, Beata J., Hansen, Lea G., Marcussen, Nils E.J., Veneman, Wouter J., Ahonen, Linda, Wungsintaweekul, Juraithip, Acevedo-Rocha, Carlos G., Dirks, Ron P., Zhang, Jie, Keasling, Jay D., and Jensen, Michael K.
- Subjects
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INDOLE alkaloids , *DRUG discovery , *KRATOM , *SYNTHETIC biology , *SACCHAROMYCES cerevisiae , *OPIOID receptors , *TREHALOSE - Abstract
Monoterpene indole alkaloids (MIAs) from Mitragyna speciosa ("kratom"), such as mitragynine and speciogynine, are promising novel scaffolds for opioid receptor ligands for treatment of pain, addiction, and depression. While kratom leaves have been used for centuries in South-East Asia as stimulant and pain management substance, the biosynthetic pathway of these psychoactives have only recently been partially elucidated. Here, we demonstrate the de novo production of mitragynine and speciogynine in Saccharomyces cerevisiae through the reconstruction of a five-step synthetic pathway from common MIA precursor strictosidine comprising fungal tryptamine 4-monooxygenase to bypass an unknown kratom hydroxylase. Upon optimizing cultivation conditions, a titer of ∼290 μg/L kratom MIAs from glucose was achieved. Untargeted metabolomics analysis of lead production strains led to the identification of numerous shunt products derived from the activity of strictosidine synthase (STR) and dihydrocorynantheine synthase (DCS), highlighting them as candidates for enzyme engineering to further improve kratom MIAs production in yeast. Finally, by feeding fluorinated tryptamine and expressing a human tailoring enzyme, we further demonstrate production of fluorinated and hydroxylated mitragynine derivatives with potential applications in drug discovery campaigns. Altogether, this study introduces a yeast cell factory platform for the biomanufacturing of complex natural and new-to-nature kratom MIAs derivatives with therapeutic potential. • De novo production of mitragynine and speciogynine in Saccharomyces cerevisiae achieved. • Five-step synthetic pathway reconstructed from strictosidine in yeast. • Optimized cultivation conditions yielded ∼290 μg/L of kratom MIAs from trehalose and glycerol. • Metabolomics analysis identified shunt products, highlighting enzyme engineering targets for further cell factory optimization. • Production of fluorinated and hydroxylated mitragynine derivatives demonstrated. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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26. Alkaloids of a Cultivar of Catharanthus roseus, their Biological Activity, and Crystal Structures of Ajmalicine and Vindolinine.
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Adizov, Sh. M., Ziyavitdinov, J. F., Tashkhodjaev, B., Aripova, S. F., Eshboev, F. B., and Azimova, Sh. S.
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- *
MOLECULAR structure , *IONS , *INDOLE alkaloids , *MOLECULAR crystals , *MASS spectrometry - Abstract
The article discusses the alkaloid composition of Catharanthus roseus cultivated in Uzbekistan, highlighting the presence of ten indole monoterpenoid alkaloids. The study also includes the crystal structures of ajmalicine and vindolinine, the major alkaloids in C. roseus. Antimicrobial activity of the alkaloids was tested against various microorganisms, with vindolinine showing activity against Candida albicans and ajmalicine exhibiting antibacterial activity against Bacillus subtilis and Staphylococcus aureus. The research provides valuable insights into the alkaloid content and biological activity of C. roseus, contributing to the understanding of its potential medicinal applications. [Extracted from the article]
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- 2024
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27. Structural diversity and chemical logic underlying the assembly of monoterpene indole alkaloids oligomers.
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Le Pogam, Pierre and Beniddir, Mehdi A.
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INDOLE alkaloids , *BINDING sites , *OLIGOMERS , *OLIGOMERIZATION , *MONOMERS - Abstract
Covering: up to 2024 This review aims to draw a parallel between all known oligomers of monoterpene indole alkaloids (MIAs) by illustrating the chemical logic underlying their assembly. For this purpose, oligomeric MIAs were first comprehensively listed and organized according to the names of the backbones of their constitutive monomers and the binding sites. From this extensive list, an oligomer network was generated and unprecedented MIA statistics were mined and shared herein. Subsequently, oligomeric MIAs were categorized according to the number of connections instigated between their monomeric components (single, double, triple, and mixed tethering), then subdivided according to the uniqueness or combination of oligomerization assembly reactions. This effort outlined oligomerization trends in a scaffold-specific manner, and established binding reactivity patterns facilitating the comprehension of the associated biosynthetic processes. At last, this review illustrates a unique initiative in crafting a comprehensive repository of machine-readable metadata for MIA oligomers that could be leveraged for chemoinformatic purposes. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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28. Evaluation of Vincamine Loaded with Silver Nanoparticles as a New Potential Therapeutic Agent Against Ehrlich's Solid Carcinoma in Mice.
- Author
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Dahran, Naief, Othman, Mohamed S., Ghoniem, Mohamed E., Samak, Mai A., Elabbasy, Mohamed T., Obeidat, Sofian T., Aleid, Ghada M., Abo Elnaga, Shimaa, Khaled, Azza M., Altaleb, Aya A., and Abdel Moneim, Ahmed E.
- Subjects
- *
INDOLE alkaloids , *SILVER nanoparticles , *BAX protein , *BODY weight , *OXIDATIVE stress - Abstract
Vincamine, a monoterpenoid indole alkaloid with vasodilatory properties, is extracted from the leaves of Vinca minor. The present study aimed to determine the potential anticancer effects of vincamine loaded in silver nanoparticles (VCN-AgNPs) in mice with Ehrlich solid carcinoma (ESC). After tumor transplantation, the mice were divided into five groups: ESC, ESC+Cisplatin (CPN; 5 mg/kg), ESC+VCN (40 mg/kg), ESC+AgNPs (6 mg/kg), and ESC+VCN-AgNPs (20 mg/kg). The administration of VCN-AgNPs to ESC-bearing mice improved their survival rate and reduced their body weight, tumor size, and tumor weight compared to the ESC group. Furthermore, VCN-AgNPs intensified oxidative stress in tumor tissues, as evidenced by elevated levels of lipid peroxidation (LPO) and nitric oxide (NO), along with a reduction in the levels of the antioxidants investigated (GSH, GPx, GR, SOD, CAT, and TAC). Furthermore, VCN-AgNPs increased the apoptotic proteins Bax and caspase-3, decreased the anti-apoptotic protein (Bcl-2), increased the inflammatory markers TNF-α and IL-1β, and inhibited angiogenesis by lowering VEGF levels in tumor tissues, all of which led to apoptosis. Furthermore, histopathological studies showed that VCN-AgNPs suppressed the progression of Ehrlich carcinoma and induced the formation of clusters of necrotic and fragmented tumor cells. VCN-AgNPs possess cytotoxic and genotoxic effects against ESC because of their pro-oxidant, pro-apoptotic, pro-inflammatory, and antiangiogenic effects. Additionally, the combination of VCN-AgNPs was more effective and safer than chemically synthesized AgNPs, as indicated by an increase in the lifespan of animals and the total tumor inhibition index. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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29. Biosynthesis of natural and halogenated plant monoterpene indole alkaloids in yeast
- Author
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Bradley, Samuel A, Lehka, Beata J, Hansson, Frederik G, Adhikari, Khem B, Rago, Daniela, Rubaszka, Paulina, Haidar, Ahmad K, Chen, Ling, Hansen, Lea G, Gudich, Olga, Giannakou, Konstantina, Lengger, Bettina, Gill, Ryan T, Nakamura, Yoko, de Bernonville, Thomas Dugé, Koudounas, Konstantinos, Romero-Suarez, David, Ding, Ling, Qiao, Yijun, Frimurer, Thomas M, Petersen, Anja A, Besseau, Sébastien, Kumar, Sandeep, Gautron, Nicolas, Melin, Celine, Marc, Jillian, Jeanneau, Remi, O’Connor, Sarah E, Courdavault, Vincent, Keasling, Jay D, Zhang, Jie, and Jensen, Michael K
- Subjects
Biological Sciences ,Industrial Biotechnology ,Complementary and Integrative Health ,Good Health and Well Being ,Saccharomyces cerevisiae ,Monoterpenes ,Indole Alkaloids ,Plants ,Pharmaceutical Preparations ,Catharanthus ,Plant Proteins ,Medicinal and Biomolecular Chemistry ,Biochemistry and Cell Biology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medicinal and biomolecular chemistry - Abstract
Monoterpenoid indole alkaloids (MIAs) represent a large class of plant natural products with marketed pharmaceutical activities against a wide range of indications, including cancer, malaria and hypertension. Halogenated MIAs have shown improved pharmaceutical properties; however, synthesis of new-to-nature halogenated MIAs remains a challenge. Here we demonstrate a platform for de novo biosynthesis of two MIAs, serpentine and alstonine, in baker's yeast Saccharomyces cerevisiae and deploy it to systematically explore the biocatalytic potential of refactored MIA pathways for the production of halogenated MIAs. From this, we demonstrate conversion of individual haloindole derivatives to a total of 19 different new-to-nature haloserpentine and haloalstonine analogs. Furthermore, by process optimization and heterologous expression of a modified halogenase in the microbial MIA platform, we document de novo halogenation and biosynthesis of chloroalstonine. Together, this study highlights a microbial platform for enzymatic exploration and production of complex natural and new-to-nature MIAs with therapeutic potential.
- Published
- 2023
30. Investigation on taxonomy, secondary metabolites and antibacterial activity of Streptomyces sediminicola sp. nov., a novel marine sediment-derived Actinobacteria.
- Author
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Zhang, Kun, Ding, Wenping, Han, Chenghui, Long, Lijuan, Yin, Hao, and Yin, Jianping
- Subjects
- *
INDOLE alkaloids , *GRAM-positive bacteria , *GENOMICS , *METABOLITES , *MARINE sediments , *POLYKETIDES - Abstract
Background: Marine actinomycetes, especially Streptomyces, are recognized as excellent producers of diverse and bioactive secondary metabolites on account of the multiplicity of marine habitations and unique ecological conditions, which are yet to be explored in terms of taxonomy, ecology, and functional activity. Isolation, culture and genome analysis of novel species of Streptomyces to explore their potential for discovering bioactive compounds is an important approach in natural product research. Results: A marine actinobacteria, designated strain SCSIO 75703 T, was isolated, and the potential for bioactive natural product discovery was evaluated based on genome mining, compound detection, and antimicrobial activity assays. The phylogenetic, phenotypic and chemotaxonomic analyses indicate that strain SCSIO 75703 T represents a novel species in genus Streptomyces, for which the name Streptomyces sediminicola sp. nov. is proposed. Genome analysis revealed the presence of 25 secondary metabolite biosynthetic gene clusters. The screening for antibacterial activity reveals the potential to produce bioactive metabolites, highlighting its value for in-depth exploration of chemical constituents. Seven compounds (1–7) were separated from the fractions guided by antibacterial activities, including three indole alkaloids (1–3), three polyketide derivatives (4–6), and 4-(dimethylamino)benzoic acid (7). These primarily antibacterial components were identified as anthracimycin (4), 2-epi-anthracimycin (5) and β-rubromycin (6), presenting strong antibacterial activities against Gram-positive bacteria with the MIC value ranged from 0.125 to 16 μg/mL. Additionally,, monaprenylindole A (1) and 3-cyanomethyl-6-prenylindole (2) displayed moderate inhibitory activities against α-glucosidase with the IC50 values of 83.27 and 86.21 μg/mL, respectively. Conclusion: Strain SCSIO 75703 T was isolated from marine sediment and identified as a novel species within the genus Streptomyces. Based on genomic analysis, compounds isolation and bioactivity studies, seven compounds were identified, with anthracimycin and β-rubromycin showing significant biological activity and promising potential for further applications. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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31. Unveiling the impact of nitrogen deficiency on alkaloid synthesis in konjac corms (Amorphophallus muelleri Blume).
- Author
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Qi, Ying, Gao, Penghua, Yang, Shaowu, Li, Lifang, Ke, Yanguo, Zhao, Yongteng, Huang, Feiyan, and Yu, Lei
- Subjects
- *
INDOLE alkaloids , *NITROGEN deficiency , *GENE expression , *ASPARTATE aminotransferase , *ALKALOIDS , *INDOLE , *ISOQUINOLINE alkaloids - Abstract
Background: Konjac corms are known for their alkaloid content, which possesses pharmacological properties. In the primary cultivation areas of konjac, nitrogen deficiency is a common problem that significantly influences alkaloid synthesis. The impact of nitrogen deficiency on the alkaloids in konjac corms remains unclear, further complicated by the transition from mother to daughter corms during their growth cycle. Results: This study examined 21 alkaloids, including eight indole alkaloids, five isoquinoline alkaloids, and eight other types of alkaloids, along with the associated gene expressions throughout the development of Amorphophallus muelleri Blume under varying nitrogen levels. Nitrogen deficiency significantly reduced corm diameter and fresh weight and delayed the transformation process. Under low nitrogen conditions, the content of indole alkaloids and the expression of genes involved in their biosynthesis, such as tryptophan synthase (TRP) and tryptophan decarboxylase (TDC), exhibited a substantial increase in daughter corms, with fold changes of 61.99 and 19.31, respectively. Conversely, in the mother corm, TDC expression was markedly reduced, showing only 0.04 times the expression level observed under 10 N treatment. The patterns of isoquinoline alkaloid accumulation in corms subjected to nitrogen deficiency were notably distinct from those observed for indole alkaloids. The accumulation of isoquinoline alkaloids was significantly higher in mother corms, with expression levels of aspartate aminotransferase (GOT), chorismate mutase (CM), tyrosine aminotransferase (TAT), and pyruvate decarboxylase (PD) being 4.30, 2.89, 921.18, and 191.40 times greater, respectively. Conversely, in daughter corms, the expression levels of GOT and CM in the 0 N treatment were markedly lower (0.01 and 0.83, respectively) compared to the 10 N treatment. Conclusions: The study suggests that under nitrogen deficiency, daughter corms preferentially convert chorismate into tryptophan to synthesize indole alkaloids, while mother corms convert it into tyrosine, boosting the production of isoquinoline alkaloids. This research provides valuable insights into the mechanisms of alkaloid biosynthesis in A. muelleri and can aid in developing nitrogen fertilization strategies and in the extraction and utilization of alkaloids. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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32. Estimating Anticancer Effects of Yohimbine in DMBA‐Induced Oral Carcinogenesis Hamster Model: Utilizing Biochemical and Immunohistochemical Techniques.
- Author
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Jabir, Nasimudeen R., Tabrez, Shams, Altwaijry, Nojood, Khan, Mohd Shahnawaz, Ramu, Arun Kumar, and Ahmed, Bakrudeen Ali
- Subjects
- *
PROLIFERATING cell nuclear antigen , *INDOLE alkaloids , *ORAL drug administration , *YOHIMBINE , *GLUTATHIONE transferase - Abstract
Yohimbine is a potent bioactive indole alkaloid, isolated from a variety of biological sources and has long been used as a natural stimulant and aphrodisiac, particularly to treat erectile dysfunction. However, some literature also points toward its anticancer effect in different experimental models. The current study aimed to address a clinical concern on the therapeutic utilization of yohimbine as a repurposed drug. We employed 7,12‐dimethylbenz[a]anthracene (DMBA)‐induced hamster buccal pouch carcinogenesis model juxtaposed with biochemical investigation of several detoxification and antioxidant markers, such as Cyt p450, Cyt b5, thiobarbituric acid reactive substance (TBARS), glutathione (GSH), glutathione reductase (GR), glutathione S transferase (GST), DT‐diaphorase, vitamin C, vitamin E, superoxide dismutase (SOD), catalase (CAT), and glutathione peroxidase (GPx). The immunohistochemical assessment of cyclooxygenase‐2 (COX‐2), interleukin‐6 (IL‐6), proliferating cell nuclear antigen (PCNA), and cyclin D1 expression were also performed to observe the effect of yohimbine on these markers. The hamsters treated with DMBA presented the growth of tumors in the buccal pouches, accompanied by significant changes in the liver and buccal mucosa levels of Phase I & II detoxification enzymes and lipid peroxidation (LPO). A significant rise in the range of 2‐ to 3.5‐fold was observed in Cyt p450, Cyt b5, and LPO in DMBA‐treated animals. However, oral administration of yohimbine significantly restored the LPO, antioxidant, and detoxifying enzyme activities. Additionally, the levels of COX‐2, IL‐6, PCNA, and cyclin D1 were also found to be downregulated by yohimbine treatment. In conclusion, yohimbine improved the biochemical and immunohistochemical markers of DMBA‐induced oral cancer and reverted to near normal values via ameliorating the underlying inflammation and oxidative stress conditions. Our study highlighted the potential of yohimbine as anticancer agent, especially against oral cancer and suggested its possible use as repurposed drug. Summary: In this study, we have used hamster model to evaluate potential of yohimbine against oral carcinogenesis.Yohimbine reinstated DMBA‐induced oral carcinogenesis and facilitated detoxification by modulating the Phase I and Phase II enzyme activities.The upregulated expression of Cox‐2, IL‐6, PCNA, and cyclin D1 was also found to be reverted to near normal by yohimbine treatment. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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33. The Effects of swnN Gene Function of Endophytic Fungus Alternaria oxytropis OW 7.8 on Its Swainsonine Biosynthesis.
- Author
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Liu, Chang, Ding, Ning, Lu, Ping, Yuan, Bo, Li, Yuling, and Jiang, Kai
- Subjects
- *
GENE knockout , *SWAINSONINE , *PHOSPHATIDIC acids , *ENDOPHYTIC fungi , *ALTERNARIA , *INDOLE alkaloids - Abstract
The swnN gene in the endophytic fungus Alternaria oxytropis OW 7.8 isolated from Oxytropis glabra was identified, and the gene knockout mutant ΔswnN was first constructed in this study. Compared with A. oxytropis OW 7.8, the ΔswnN mutant exhibited altered colony and mycelia morphology, slower growth rate, and no swainsonine (SW) in mycelia. SW was detected in the gene function complementation strain ΔswnN/swnN, indicating that the function of the swnN gene promoted SW biosynthesis. Six differentially expressed genes (DEGs) closely associated with SW synthesis were identified by transcriptomic analysis of A. oxytropis OW 7.8 and ΔswnN, with P5CR, swnR, swnK, swnH2, and swnH1 down-regulating, and sac up-regulating. The expression levels of the six genes were consistent with the transcriptomic analysis results. Five differential metabolites (DEMs) closely associated with SW synthesis were identified by metabolomic analysis, with L-glutamate, α-ketoglutaric acid, and L-proline up-regulating, and phosphatidic acid (PA) and 2-aminoadipic acid down-regulating. The SW biosynthetic pathways in A. oxytropis OW 7.8 were predicted and refined. The results lay the foundation for in-depth elucidation of molecular mechanisms and the SW synthesis pathway in fungi. They are also of importance for the prevention of locoism in livestock, the control and utilization of locoweeds, and the protection and sustainable development of grassland ecosystems. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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34. 蟾蜍毒素研究进展.
- Author
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曹振宇 and 董 颖
- Subjects
INDOLE alkaloids ,TOXICITY testing ,TOXINS ,TOADS - Abstract
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- Published
- 2024
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35. Systematic appraisals of naturally occurring alkaloids from medicinal plants.
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Oladeji, Oluwole Solomon, Odelade, Kehinde Abraham, Mahal, Ahmed, Obaidullah, Ahmad J., and Zainul, Rahadian
- Subjects
INDOLE alkaloids ,BIOACTIVE compounds ,MEDICINAL plants ,MEDICAL botany ,CYTOTOXINS - Abstract
Alkaloids are a complex class of biologically active compounds with a broad spectrum of health-related applications. Particularly the alkaloids of indole, steroidal, terpenoids, isoquinoline, and bisbenzylisoquinoline have been extensively investigated. Ultimately, substantial advancement has been highlighted in the investigation of chemical constituents and the therapeutic benefits of plant alkaloids, particularly during the last ten years. A total of 386 alkaloids have been isolated from over 40 families, including Apocynaceae, Annonaceae, Rubiaceae, Menispermaceae, Ranunculaceae, Buxaceae, Papaveraceae, Magnoliaceae, Rutaceae and Phyllanthaceae. This paper will investigate several alkaloids that have been isolated from botanical medicines as well as offer an in-depth analysis of their cytotoxic properties. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
36. Aspertaichamide B, a new anti-tumor prenylated indole alkaloid from the fungus Aspergillus japonicus TE-739D.
- Author
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Cao, Lu-Lu, Gao, Zhong-Jie, Wang, De-Xia, Nie, Yanyan, Yu, Hua, and Zhang, Peng
- Subjects
- *
INDOLE alkaloids , *INHIBITION of cellular proliferation , *LEAD compounds , *ENDOPHYTIC fungi , *STOMACH cancer - Abstract
Prenylated indole alkaloids, which are mainly produced by genera Aspergillus and Penicillium, are a class of structurally intriguing specialized metabolites with remarkable biomedical interests. In this study, chemically guided isolation of the Nicotiana tabacum-derived endophytic fungus Aspergillus japonicus TE-739D yielded eight structurally diverse prenylated indole alkaloids, including an undescribed compound, namely aspertaichamide B (ATB, 1), together with seven previously discovered derivatives (compounds 2 − 8). Their chemical structures as well as the stereochemical features were determined by integrated spectroscopic analyses, including HRESIMS, NMR, NMR calculations with DP4 + probability analysis, and a comparison of the experimental ECD data with computed DFT-based quantum chemical calculations. In vitro cytotoxic effects against the gastric cancer MFC cells revealed that the new compound ATB demonstrated considerable activity. Further studies found that ATB suppressed the viability, colony formation, and migration ability of MFC cells, and induced MFC cells apoptosis in a concentration-dependent way. Moreover, ATB stimulated ROS production in MFC cells and inhibited the tumor growth in the MFC-sourced subcutaneous tumor model while not significantly reducing the weight of mice. The pharmacological results suggested that the newly discovered ATB may be a promising anti-tumor lead compound. Key points: • Eight structurally diverse prenylated indole alkaloids including a new aspertaichamide B (ATB) were isolated from the fungus Aspergillus japonicus TE-739D. • The structure of ATB was elucidated by HRESIMS, NMR, NMR calculations with DP4 + probability analysis, and ECD calculations. • ATB inhibited cell proliferation, promoted apoptosis, and increased ROS production in gastric cancer cells, and exhibited inhibitory effects on tumor growth in vivo. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
37. Disrupting Substance Use Disorder: The Chemistry of Iboga Alkaloids.
- Author
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Hughes, Alexander J., Hamelink, Charles R., and Townsend, Steven D.
- Subjects
- *
INDOLE alkaloids , *DRUG discovery , *SUBSTANCE abuse treatment , *SUBSTANCE abuse , *NICOTINE - Abstract
The iboga alkaloids are a family of monoterpene indole alkaloids first discovered from the root of Tabernanthe iboga. The major alkaloid constituent in the root, ibogaine, has garnered interest for its anti‐addictive properties. Ibogaine has been shown to reduce opiate, amphetamine, alcohol, and nicotine self‐administration in rodents. However, ibogaine itself is less than optimal as a treatment in humans for Substance Abuse Disorder (SUD) due to its cardiotoxicity and hallucinogenic potential. Instead, ibogaine is an attractive lead for drug discovery efforts. Indeed, several notable programs have been launched to both elucidate ibogaine's mechanism of action and reduce its toxicity. While there have been over 20 total syntheses of ibogamine, ibogaine, and closely related family members, there are far fewer syntheses of recently isolated iboga alkaloids. In this targeted review, we discuss the synthetic strategies applied to the synthesis of classical and non‐classical iboga alkaloids. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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- View/download PDF
38. READRetro: natural product biosynthesis predicting with retrieval‐augmented dual‐view retrosynthesis.
- Author
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Kim, Taein, Lee, Seul, Kwak, Yejin, Choi, Min‐Soo, Park, Jeongbin, Hwang, Sung Ju, and Kim, Sang‐Gyu
- Subjects
- *
INDOLE alkaloids , *SESSILE organisms , *PLANT products , *METABOLITES , *BOTANY , *DEEP learning - Abstract
Summary: Plants, as a sessile organism, produce various secondary metabolites to interact with the environment. These chemicals have fascinated the plant science community because of their ecological significance and notable biological activity. However, predicting the complete biosynthetic pathways from target molecules to metabolic building blocks remains a challenge.Here, we propose retrieval‐augmented dual‐view retrosynthesis (READRetro) as a practical bio‐retrosynthesis tool to predict the biosynthetic pathways of plant natural products. Conventional bio‐retrosynthesis models have been limited in their ability to predict biosynthetic pathways for natural products. READRetro was optimized for the prediction of complex metabolic pathways by incorporating cutting‐edge deep learning architectures, an ensemble approach, and two retrievers.Evaluation of single‐ and multi‐step retrosynthesis showed that each component of READRetro significantly improved its ability to predict biosynthetic pathways. READRetro was also able to propose the known pathways of secondary metabolites such as monoterpene indole alkaloids and the unknown pathway of menisdaurilide, demonstrating its applicability to real‐world bio‐retrosynthesis of plant natural products.For researchers interested in the biosynthesis and production of secondary metabolites, a user‐friendly website (https://readretro.net) and the open‐source code of READRetro have been made available. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
39. The Potential of Indole Alkaloids in Bone Health and Osteoporosis Management.
- Author
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Caruso, Anna, Caira, Virginia, El-Kashef, Hussein, and Saturnino, Carmela
- Subjects
INDOLE alkaloids ,BONE health ,ANIMAL models in research ,OSTEOPOROSIS ,BIOCOMPATIBILITY - Abstract
Indole alkaloids, a class of plant-derived nitrogen-containing compounds, have emerged as promising candidates for osteoporosis treatment. Their favorable biocompatibility profile demonstrated efficacy in preclinical models, and low reported toxicity make them attractive alternatives to existing therapies. This review focuses on the therapeutic potential of specific indole alkaloids, including vindoline, rutaecarpine, harmine, and its derivatives, in promoting bone health and managing osteoporosis. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
40. Pharmacokinetics of Psilocybin, a Tryptamine Alkaloid in Magic Mushroom (<italic>Psilocybe cubensis</italic>): A Systematic Review.
- Author
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Thaoboonruang, Nilubon, Lohitnavy, Manupat, and Lohitnavy, Ornrat
- Subjects
- *
INDOLE alkaloids , *MENTAL depression , *ALKALINE phosphatase , *PHARMACOKINETICS , *ALKALOIDS , *PSILOCYBIN - Abstract
Psilocybin, a major indole alkaloid found in magic mushrooms (
Psilocybe cubensis ), has recently drawn attention as a breakthrough therapy to treat major depressive disorder. This review aimed to summarize and identify knowledge gaps concerning their pharmacokinetic characteristics of psilocybin and its active metabolite, psilocin. Original studies related to pharmacokinetics of psilocybin conductedin vitro , animals, and humans were systematically collected from PubMed, Scopus, and ScienceDirect, from their inceptions to November 2023. Twenty articles were included in this work and assessed for study quality. A comprehensive review of the pharmacokinetics of psilocybin and psilocin in both animals and humans was performed. Psilocybin is considered a prodrug that is dephosphorylated to psilocin by alkaline phosphatase. Following ingestion, the peak psilocin plasma and brain levels were rapidly achieved in a dose-dependent manner. Psilocin is metabolized primarily through both Phase I and Phase II processes with the half-life of 2–3 hours. This review also identified lack of some pharmacokinetic related information and limitations of available research that may help direct future investigations to better understand the pharmacokinetics and improve study design including dose selection and dosage optimization. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
41. Parallel evolution of methyltransferases leads to vobasine biosynthesis in Tabernaemontana elegans and Catharanthus roseus.
- Author
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Farzana, Maisha, Bailey Richardson, Matthew, Ramey Deschênes, Daniel André, Zhan Mai, Njoku, Destiny Ichechi, Deslongchamps, Ghislain, and Yang Qu
- Subjects
INDOLE alkaloids ,CATHARANTHUS roseus ,PLANT enzymes ,BINDING sites ,TABERNAEMONTANA - Abstract
Monoterpenoid indole alkaloids (MIA) are one of the largest and most complex alkaloid class in nature, boasting many clinically significant drugs such as anticancer vinblastine and antiarrhythmic ajmaline. Many MIAs undergo nitrogen N-methylation, altering their reactivity and affinity to the biological targets through a straightforward reaction. Remarkably, all known MIA N-methyltransferases (NMT) originate from the neofunctionalization of ancestral γ-tocopherol C-methyltransferases (γTMTs), a phenomenon seemingly unique to the Apocynaceae family. In this study, we unveil and characterize a new γTMT-like enzyme from the plant Tabernaemontana elegans (toad tree): perivine Nγ-methyltransferase (TePeNMT). TePeNMT and other homologs form a distinct clade in our phylogenetic study, setting them apart from other γTMTs and γTMT-like NMTs discovered to date. Enzyme kinetic experiments and enzyme homology modeling studies reveal the significant differences in enzyme active sites between TePeNMT and CrPeNMT, a previously characterized perivine Nβ-methyltransferase from Catharanthus roseus (Madagascar periwinkle). Collectively, our findings suggest that parallel evolution of ancestral γTMTs may be responsible for the occurrence of perivine N-methylation in T. elegans and C. roseus. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
42. Catalytic selectivity and evolution of cytochrome P450 enzymes involved in monoterpene indole alkaloids biosynthesis.
- Author
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Liu, Zhan, Pang, Jing, Li, Yi, Wei, Daijing, Yang, Jing, Wang, Xuefei, and Luo, Yinggang
- Subjects
- *
AMINO acid sequence , *AMINO acid residues , *SCISSION (Chemistry) , *INDOLE alkaloids , *CATHARANTHUS roseus , *DNA topoisomerase I - Abstract
Cytochrome P450 enzyme (CYP)‐catalyzed functional group transformations are pivotal in the biosynthesis of metabolic intermediates and products, as exemplified by the CYP‐catalyzed C7‐hydroxylation and the subsequent C7‐C8 bond cleavage reaction responsible for the biosynthesis of the well‐known antitumor monoterpene indole alkaloid (MIA) camptothecin. To determine the key amino acid residues responsible for the catalytic selectivity of the CYPs involved in MIA biosynthesis, we characterized the enzymes CYP72A728 and CYP72A729 as stereoselective 7‐deoxyloganic acid 7‐hydroxylases (7DLHs). We then conducted a comparative analysis of the amino acid sequences and the predicted structures of the CYP72A homologs involved in camptothecin biosynthesis, as well as those of the CYP72A homologs implicated in the pharmaceutically significant MIAs biosynthesis in Catharanthus roseus. The crucial amino acid residues for the catalytic selectivity of the CYP72A‐catalyzed reactions were identified through fragmental and individual residue replacement, catalytic activity assays, molecular docking, and molecular dynamic simulations analysis. The fragments 1 and 3 of CYP72A565 were crucial for its C7‐hydroxylation and C7‐C8 bond cleavage activities. Mutating fragments 1 and 2 of CYP72A565 transformed the bifunctional CYP72A565 into a monofunctional 7DLH. Evolutionary analysis of the CYP72A homologs suggested that the bifunctional CYP72A in MIA‐producing plants may have evolved into a monofunctional CYP72A. The gene pairs CYP72A728‐CYP72A610 and CYP72A729‐CYP72A565 may have originated from a whole genome duplication event. This study provides a molecular basis for the CYP72A‐catalyzed hydroxylation and C‐C bond cleavage activities of CYP72A565, as well as evolutionary insights of CYP72A homologs involved in MIAs biosynthesis. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
43. ScRNA‐seq reveals the spatiotemporal distribution of camptothecin pathway and transposon activity in Camptotheca acuminata shoot apexes and leaves.
- Author
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Wang, Shu, Zhang, Chuyi, Li, Ying, Li, Rucan, Du, Ke, Sun, Chao, Shen, Xiaofeng, and Guo, Baolin
- Subjects
- *
GENE expression , *SHOOT apexes , *INDOLE alkaloids , *CATHARANTHUS roseus , *CYTOCHROME P-450 - Abstract
Camptotheca acuminata Decne., a significant natural source of the anticancer drug camptothecin (CPT), synthesizes CPT through the monoterpene indole alkaloid (MIA) pathway. In this study, we used single‐cell RNA sequencing (scRNA‐seq) to generate datasets encompassing over 60,000 cells from C. acuminata shoot apexes and leaves. After cell clustering and annotation, we identified five major cell types in shoot apexes and four in leaves. Analysis of MIA pathway gene expression revealed that most of them exhibited heightened expression in proliferating cells (PCs) and vascular cells (VCs). In contrast to MIA biosynthesis in Catharanthus roseus, CPT biosynthesis in C. acuminata did not exhibit multicellular compartmentalization. Some putative genes encoding enzymes and transcription factors (TFs) related to the biosynthesis of CPT and its derivatives were identified through co‐expression analysis. These include 19 cytochrome P450 genes, 8 O‐methyltransferase (OMT) genes, and 62 TFs. Additionally, these pathway genes exhibited dynamic expression patterns during VC and EC development. Furthermore, by integrating gene and transposable element (TE) expression data, we constructed novel single‐cell transcriptome atlases for C. acuminata. This approach significantly facilitated the identification of rare cell types, including peripheral zone cells (PZs). Some TE families displayed cell type specific, tissue specific, or developmental stage‐specific expression patterns, suggesting crucial roles for these TEs in cell differentiation and development. Overall, this study not only provides novel insights into CPT biosynthesis and spatial–temporal TE expression characteristics in C. acuminata, but also serves as a valuable resource for further comprehensive investigations into the development and physiology of this species. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
44. A New Antibacterial Indole Alkaloid from Cigar Tobacco and Its Potential Application in Antiseptic Cigarette Tipping Paper.
- Author
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Kong, Guang-Hui, Liu, Jing, Yin, Pei-Pei, Wang, Lei, Yang, Wan-Long, Shen, Jun-Ru, He, Xiao-Hui, Jiao, Fang-Chang, Wu, Yu-Ping, and Dong, Gao-Feng
- Subjects
- *
INDOLE alkaloids , *CIGARS , *BACILLUS subtilis , *ANTIBACTERIAL agents , *STAPHYLOCOCCUS aureus - Abstract
A new indole alkaloid, cigarindole A (1), together with five known indole alkaloids (2–6) were isolated from cigar tobacco. Their structures were elucidated using spectroscopic methods, including extensive 1D and 2D NMR techniques. Interestingly, compound 1 exhibited high antibacterial activity with bacteriostatic diameter within the range 20.6–26.7 mm against five pathogenic strains (Staphylococcus aureus, Escherichia coli, Streptococcus pneumoniae, Bacillus subtilis, and Proteus spp). Compounds 2–6 exhibited obvious antibacterial activity with bacteriostatic diameter within the range 11.9–21.8 mm. In addition, compound 1 also the potential value for use as an antiseptic agent for cigarette tipping paper. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
45. Genome-Wide Survey of the Potential Function of CrLBDs in Catharanthus roseus MIA Biosynthesis.
- Author
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Chang, Chunhao, Yang, Bingrun, Guo, Xiaorui, Gao, Chunyan, Wang, Biying, Zhao, Xiaoju, and Tang, Zhonghua
- Subjects
- *
TRANSCRIPTION factors , *CATHARANTHUS roseus , *INDOLE alkaloids , *GENE families ,LEAF growth - Abstract
Catharanthus roseus (C. roseus) can produce over 150 types of monoterpenoid indole alkaloids (MIAs), including vinblastine and vincristine, which are currently the primary sources of these alkaloids. Exploring the complex regulatory mechanisms of C. roseus is significant for resolving MIA biosynthesis. The Lateral Organ Boundaries Domain (LBD) is a plant-specific transcription factor family that plays crucial roles in the physiological processes of plant growth, stress tolerance, and specialized metabolism. However, the LBD gene family has not been extensively characterized in C. roseus, and whether its members are involved in MIA biosynthesis is still being determined. A total of 34 C. roseus LBD (CrLBD) genes were identified. RNA-Seq data were investigated to examine the expression patterns of CrLBD genes in various tissues and methyl jasmonate (MeJA) treatments. The results revealed that the Class Ia member CrLBD4 is positively correlated with iridoid biosynthetic genes (p < 0.05, r ≥ 0.8); the Class IIb member CrLBD11 is negatively correlated with iridoid biosynthetic genes (p < 0.05, r ≤ −0.8). Further validation in leaves at different growth stages of C. roseus showed that CrLBD4 and CrLBD11 exhibited different potential expression trends with iridoid biosynthetic genes and the accumulation of vindoline and catharanthine. Yeast one-hybrid (Y1H) and subcellular localization assays demonstrated that CrLBD4 and CrLBD11 could bind to the "aattatTCCGGccgc" cis-element and localize to the nucleus. These findings suggest that CrLBD4 and CrLBD11 may be potential candidates for regulating MIA biosynthesis in C. roseus. In this study, we systematically analyzed the CrLBD gene family and provided insights into the roles of certain CrLBDs in the MIA biosynthesis of C. roseus. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
46. Gene fusion and functional diversification of P450 genes facilitate thermophilic fungal adaptation to temperature change.
- Author
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Li, Shuhong, He, Jiangbo, Wu, Qunfu, Gou, Jianghui, Wang, Donglou, and Niu, Xuemei
- Subjects
- *
IRON chelates , *INDOLE alkaloids , *GENE fusion , *FUNGAL colonies , *BODY temperature regulation - Abstract
Thermomyces dupontii harbors two P450 paralogs (P450S and P450L) in the gene cluster for the biosynthesis of prenylated indole alkaloids (PIAs) and correponding iron chelators with P450L assigned as one protein containing a CYP like domain fused with a FAD-binding domain-containing oxidoreductase. Genetic manipulation and metabolic profile analysis indicated both P450S and P450L were involved in transforming simple PIAs to their corresponding iron chelators. Moreover, P450S is responsible for bolstering simple PIAs to complex PIAs, and P450L for reinforcing conjugating unsaturated systems in complex PIAs. Chemical investigation led to isolation and characterization of novel complex PIA metabolites with more oxidations. P450L also contributed to forming the third iron-chelating core in iron chelators. A series of iron bioassays and infrastructure analysis revealed that lack of these P450 genes caused strongly elevated Fe3+ levels but attenuated Fe2+ levels, together with abnormal mitochondria in mycelia and lipid droplets and vacuoles in conidia. Phenotype analysis revealed that P450S and P450L facilitated fungal colony pigments, conidial formation and germination via bolstering conidiophores and cell walls in response to temperature reduction. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
47. Catalindoles A–C: brominated indole alkaloids from the starfish Thromidia catalai, which feeds on Theonella sponges.
- Author
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Matsuta, Ryuga, Shigeno, Satoru, Ohshiro, Taichi, Ueda, Masafumi, and Takada, Kentaro
- Subjects
- *
INDOLE alkaloids , *ANALYTICAL chemistry , *METABOLITES , *INDOLE compounds , *SPONGES (Invertebrates) - Abstract
Marine sponges harbor diverse secondary metabolites with a variety of biological activity, many of which are considered as chemical defense substances for the sponges themselves. Recently, we observed that Thromidia catalai, one of the largest species of starfish, feeds on the sponge Theonella swinhoei (chemotype Y), known to contain diverse biologically active metabolites. Here we report the isolation of three novel brominated indole alkaloids, catalindoles A–C, from the arms of T. catalai as well as the elucidation of their structures. Their structures were determined by a combination of spectroscopic data analyses and chemical methods, and they were further confirmed by chemical syntheses of the molecules. Moreover, we revealed the predator–prey relationship between T. catalai and Theonella sponges in terms of chemical components, noting that T. catalai feeds not only on T. swinhoei (chemotype Y) but also on T. swinhoei (chemotype W). [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
48. Characterization of the ZCTs, a subgroup of Cys2-His2 zinc finger transcription factors regulating alkaloid biosynthesis in Catharanthus roseus.
- Author
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Traverse, Krystyna K. F., Breselge, Samuel, Trautman, Juliet G., Dee, Amanda, Wang, Jie, Childs, Kevin L., and Lee-Parsons, Carolyn W. T.
- Subjects
- *
TRANSCRIPTION factors , *ZINC-finger proteins , *INDOLE alkaloids , *CATHARANTHUS roseus , *BIOSYNTHESIS - Abstract
Key Message: The C. roseus ZCTs are jasmonate-responsive, can be induced by CrMYC2a, and can act as significant regulators of the terpenoid indole alkaloid pathway when highly expressed. Catharanthus roseus is the sole known producer of the anti-cancer terpenoid indole alkaloids (TIAs), vinblastine and vincristine. While the enzymatic steps of the pathway have been elucidated, an understanding of its regulation is still emerging. The present study characterizes an important subgroup of Cys2-His2 zinc finger transcription factors known as Zinc finger CatharanthusTranscription factors (ZCTs). We identified three new ZCT members (named ZCT4, ZCT5, and ZCT6) that clustered with the putative repressors of the TIA pathway, ZCT1, ZCT2, and ZCT3. We characterized the role of these six ZCTs as potential redundant regulators of the TIA pathway, and their tissue-specific and jasmonate-responsive expression. These ZCTs share high sequence conservation in their two Cys2-His2 zinc finger domains but differ in the spacer length and sequence between these zinc fingers. The transient overexpression of ZCTs in seedlings significantly repressed the promoters of the terpenoid (pLAMT) and condensation branch (pSTR1) of the TIA pathway, consistent with that previously reported for ZCT1, ZCT2, and ZCT3. In addition, ZCTs significantly repressed and indirectly activated several promoters of the vindoline pathway (not previously studied). The ZCTs differed in their tissue-specific expression but similarly increased with jasmonate in a dosage-dependent manner (except for ZCT5). We showed significant activation of the pZCT1 and pZCT3 promoters by the de-repressed CrMYC2a, suggesting that the jasmonate-responsive expression of the ZCTs can be mediated by CrMYC2a. In summary, the C. roseus ZCTs are jasmonate-responsive, can be induced by CrMYC2a, and can act as significant regulators of the TIA pathway when highly expressed. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
49. Nanofiber-based delivery of evodiamine impedes malignant properties of intrahepatic cholangiocarcinoma cells by targeting HDAC4 and restoring TPM1 transcription.
- Author
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Zou, Rui, Wang, Yiyao, Cai, Yaoqing, Xing, Zhenming, Shao, Yongfu, Li, Duo, and Qi, Chunchun
- Subjects
DRUG delivery systems ,INDOLE alkaloids ,HISTONE deacetylase ,GENETIC transcription ,DRUG efficacy - Abstract
The electrospun nanofiber system is correlated with high efficacy of drug delivery. This study aims to investigate the effect of nanofiber-based delivery of evodiamine, an indole alkaloid derived from Rutaceae plants Evodia rutaecarpa (Juss.) Benth, on intrahepatic cholangiocarcinoma (ICC), as well as to explore the molecular mechanisms. An electrospun nanofiber system carrying evodiamine was generated. Compared to evodiamine treatment alone, the nano-evodiamine exhibited more pronounced effects on suppressing proliferation, colony formation, invasiveness, migration, apoptosis resistance, cell cycle progression, and in vivo tumorigenesis of two ICC cell lines (HUCC-T1 and RBE). ICC cells exhibited increased expression of histone deacetylase 4 (HDAC4) while decreased tropomyosin 1 (TPM1). HDAC4 suppressed TPM1 expression by removing H3K9ac modifications from its promoter. Nano-evodiamine reduced HDAC4 protein levels in ICC cells, thus promoting transcription and expression of TPM1. Either overexpression of HDAC4 or downregulation of TPM1 negated the tumor-suppressive effects of nano-evodiamine. Collectively, this study demonstrates that the electrospun nanofiber system enhances the efficiency of evodiamine. Additionally, evodiamine suppresses the malignant properties of ICC cells. The findings may provide fresh insights into the application of electrospun nanofiber system for drug delivery and the effects of evodiamine on tumor suppression. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
50. Asymmetric Total Synthesis of Alstrostine G Utilizing a Catalytic Asymmetric Desymmetrization Strategy.
- Author
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Zhang, Nanping, Wang, Cheng, Xu, Hailong, Zheng, Ming, Jiang, Huanfeng, Chen, Kai, and Ma, Zhiqiang
- Subjects
- *
ASYMMETRIC synthesis , *INDOLE alkaloids , *HECK reaction , *NATURAL products , *GLYCOLS - Abstract
A highly effective enantioselective monobenzoylation of 1,3‐diols has been developed for the synthesis of 1,1‐disubstituted tetrahydro‐β‐carbolines. The chemistry has been successfully applied to the asymmetric total synthesis of (+)‐alstrostine G, which also features a cascade Heck/hemiamination reaction enabling facile construction of the pivotal pentacyclic core. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
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