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183 results on '"Tinoco I Jr"'

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1. RNA Folding

3. A two-state kinetic model for the unfolding of single molecules by mechanical force

4. DNA dynamics in aqueous solution: opening the double helix

11. Co-temporal Force and Fluorescence Measurements Reveal a Ribosomal Gear Shift Mechanism of Translation Regulation by Structured mRNAs.

12. Full molecular trajectories of RNA polymerase at single base-pair resolution.

13. EF-G catalyzed translocation dynamics in the presence of ribosomal frameshifting stimulatory signals.

14. The ethical scientist: An old-fashioned view.

15. Ribosome. Mechanical force releases nascent chain-mediated ribosome arrest in vitro and in vivo.

16. Ribosome excursions during mRNA translocation mediate broad branching of frameshift pathways.

17. A frameshifting stimulatory stem loop destabilizes the hybrid state and impedes ribosomal translocation.

18. Probing the mechanisms of translation with force.

19. Fun and games in Berkeley: the early years (1956-2013).

20. Frameshifting dynamics.

21. Ribosomal protein S1 unwinds double-stranded RNA in multiple steps.

22. The ribosome modulates nascent protein folding.

23. Single-base pair unwinding and asynchronous RNA release by the hepatitis C virus NS3 helicase.

24. The ribosome uses two active mechanisms to unwind messenger RNA during translation.

25. Biological mechanisms, one molecule at a time.

26. Triplex structures in an RNA pseudoknot enhance mechanical stability and increase efficiency of -1 ribosomal frameshifting.

27. Simulation and analysis of single-ribosome translation.

28. Mechanical unfolding of two DIS RNA kissing complexes from HIV-1.

29. Characterization of the mechanical unfolding of RNA pseudoknots.

30. How RNA unfolds and refolds.

31. Measurement of the effect of monovalent cations on RNA hairpin stability.

32. Single-molecule mechanical unfolding and folding of a pseudoknot in human telomerase RNA.

33. NS3 helicase actively separates RNA strands and senses sequence barriers ahead of the opening fork.

34. Force unfolding kinetics of RNA using optical tweezers. I. Effects of experimental variables on measured results.

35. Real-time control of the energy landscape by force directs the folding of RNA molecules.

36. Determination of thermodynamics and kinetics of RNA reactions by force.

37. Unusual mechanical stability of a minimal RNA kissing complex.

38. RNA translocation and unwinding mechanism of HCV NS3 helicase and its coordination by ATP.

39. Probing the mechanical folding kinetics of TAR RNA by hopping, force-jump, and force-ramp methods.

40. Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies.

41. Temperature control methods in a laser tweezers system.

42. The effect of force on thermodynamics and kinetics: unfolding single RNA molecules.

43. RNA folding and unfolding.

44. Force as a useful variable in reactions: unfolding RNA.

45. Identifying kinetic barriers to mechanical unfolding of the T. thermophila ribozyme.

46. The effect of force on thermodynamics and kinetics of single molecule reactions.

47. Equilibrium information from nonequilibrium measurements in an experimental test of Jarzynski's equality.

48. Physical chemistry of nucleic acids.

49. Biophysical analysis of nucleic acids.

50. Reversible unfolding of single RNA molecules by mechanical force.

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