106 results on '"Teh, I"'
Search Results
2. SPATIO-TEMPORAL ANALYSIS AND MODELLING OF DENGUE INCIDENCES IN QUEZON CITY USING ORDINARY LEAST SQUARES AND SPATIAL REGRESSION
- Author
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Blanco, A. C., Harder, B. J. J., and Teh, I. A. R.
- Abstract
This research examined monthly dengue incidences per barangay (village) in Quezon City, Philippines over a period of six years (2010–2015) to determine the relative significance of environmental variables on dengue prevalence. The data were subjected to correlation analysis, spatial autocorrelation assessment, multiple factor analysis, ordinary least squares (OLS) and spatial regression. Local Indicators of Spatial Autocorrelation (LISA) Moran’s I cluster maps indicate significant (p=0.05, 0.01) High-High clustering and Low-Low clustering in the northern and southern parts of the city, respectively. Monthly total cases indicated increasing trend staring from May/June, peaking at around August/September, and declining afterwards to lower levels in November/December. This corresponds to the typical temporal rainfall pattern. Dengue cases were found to be positively correlated (α=0.05) with Population (R=0.84), Informal_Settlements (IS) (R=0.716), Very_Low_Density_Residential (VLDR) (R=0.512), Open_Spaces (OS) (R=0.339), Mean_Rainfall (RFM) (R=0.637), and Mean Elevation (EM) (R=0.498). Dengue incidence (DI) was negatively correlated with Mean Air Temperature (ATM) (R=−0.3 to 0.5). Based on factor analysis, the dengue incidences were closely related to these variables, though factors F1 and F2 accounted for only 28% of the data variability. Ordinary Least Square (OLS) regression analysis of DI with general land use (LU) classes (e.g., no subclasses in residential areas) identified only IS and OS, explaining 43% of the variability of DI, with IS having twice as much influence on DI compared to OS. When residential subclasses are considered, VLDR was added to the model, slightly increasing R-squared to 0.452. Considering, in addition, EM, RFM, and ATM, the R-squared improved to 0.589, with RFM and EM considered more influential on dengue compared to IS and OS. ATM was however removed due to multicollinearity. The use of Spatial Error regression (SER) and Spatial Lag regression (SLR) produced improved models relative to the OLS model with R-squared of 0.676 and 0.667, respectively. This indicates the importance of spatial dependence. This can be explained by the fact that mosquitos fly over considerably long distances, traversing across the different barangays. The SER model (AIC=1359.89; SE=26.9584) is slightly better than the SLR model (AIC=1366.05; SE= 27.3399).
- Published
- 2023
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3. PO-1731 Evaluation of materials suitable for anthropomorphic multimodality (CT/MRI) phantoms for RT purposes
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Alzahrani, M., primary, Broadbent, D., additional, Teh, I., additional, Al-Qaisieh, B., additional, Walker, A., additional, Lamb, R., additional, and Speight, R., additional
- Published
- 2023
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4. 1 Microstructural & microvascular phenotype of hypertrophic cardiomyopathy – from mutation to hypertrophy; a multicentre collaborative study of 192-subjects
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Joy, G, primary, Kelly, CI, additional, Webber, M, additional, Pierce, I, additional, Teh, I, additional, Schneider, JE, additional, Nguyen, C, additional, Kellman, P, additional, Hughes, RK, additional, Velazques, P, additional, Das, A, additional, Tomé, M, additional, Captur, G, additional, Dall’Armellina, E, additional, Moon, JC, additional, and Lopes, LR, additional
- Published
- 2023
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5. Advanced microstructural substrate detection in pre-hypertrophic HCM and its relationship to arrhythmogenesis; a hybrid CMR-ECG-Imaging study
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Joy, G, primary, Webber, M, additional, Kelly, C I, additional, Pierce, I, additional, Teh, I, additional, Schneider, J, additional, Nguyen, C, additional, Kellman, P, additional, Orini, M, additional, Lambiase, P, additional, Rudy, Y, additional, Captur, G, additional, Dall'armellina, E, additional, Moon, J C, additional, and Lopes, L R, additional
- Published
- 2022
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6. P15.04.B Serial18F-fluciclovine PET-CT and multiparametric MRI during chemoradiation for glioblastoma - an exploratory clinical study with pre-clinical correlation
- Author
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Fatania, K, primary, Fernandez, S, additional, Shaw, G C, additional, Salvatore, D, additional, Teh, I, additional, Schneider, J E, additional, Murray, L, additional, Scarsbrook, A F, additional, Short, S C, additional, and Currie, S, additional
- Published
- 2022
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7. Phenotyping hypertrophic cardiomyopathy using cardiac diffusion magnetic resonance imaging: the relationship between microvascular dysfunction and microstructural changes
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Das, A, Kelly, C, Teh, I, Nguyen, C, Brown, LAE, Chowdhary, A, Jex, N, Thirunavukarasu, S, Sharrack, N, Gorecka, M, Swoboda, PP, Greenwood, JP, Kellman, P, Moon, JC, Davies, RH, Lopes, LR, Joy, G, Plein, S, Schneider, JE, and Dall’Armellina, E
- Subjects
cardiovascular diseases - Abstract
Aims Microvascular dysfunction in hypertrophic cardiomyopathy (HCM) is predictive of clinical decline, however underlying mechanisms remain unclear. Cardiac diffusion tensor imaging (cDTI) allows in vivo characterization of myocardial microstructure by quantifying mean diffusivity (MD), fractional anisotropy (FA) of diffusion, and secondary eigenvector angle (E2A). In this cardiac magnetic resonance (CMR) study, we examine associations between perfusion and cDTI parameters to understand the sequence of pathophysiology and the interrelation between vascular function and underlying microstructure. Methods and results Twenty HCM patients underwent 3.0T CMR which included: spin-echo cDTI, adenosine stress and rest perfusion mapping, cine-imaging, and late gadolinium enhancement (LGE). Ten controls underwent cDTI. Myocardial perfusion reserve (MPR), MD, FA, E2A, and wall thickness were calculated per segment and further divided into subendocardial (inner 50%) and subepicardial (outer 50%) regions. Segments with wall thickness ≤11 mm, MPR ≥2.2, and no visual LGE were classified as ‘normal’. Compared to controls, ‘normal’ HCM segments had increased MD (1.61 ± 0.09 vs. 1.46 ± 0.07 × 10−3 mm2/s, P = 0.02), increased E2A (60 ± 9° vs. 38 ± 12°, P < 0.001), and decreased FA (0.29 ± 0.04 vs. 0.35 ± 0.02, P = 0.002). Across all HCM segments, subendocardial regions had higher MD and lower MPR than subepicardial (MDendo 1.61 ± 0.08 × 10−3 mm2/s vs. MDepi 1.56 ± 0.18 × 10−3 mm2/s, P = 0.003, MPRendo 1.85 ± 0.83, MPRepi 2.28 ± 0.87, P < 0.0001). Conclusion In HCM patients, even in segments with normal wall thickness, normal perfusion, and no scar, diffusion is more isotropic than in controls, suggesting the presence of underlying cardiomyocyte disarray. Increased E2A suggests the myocardial sheetlets adopt hypercontracted angulation in systole. Increased MD, most notably in the subendocardium, is suggestive of regional remodelling which may explain the reduced subendocardial blood flow.
- Published
- 2021
8. SPATIO-TEMPORAL ANALYSIS AND MODELLING OF DENGUE INCIDENCES IN QUEZON CITY USING ORDINARY LEAST SQUARES AND SPATIAL REGRESSION.
- Author
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Blanco, A. C., Harder, B. J. J., and Teh, I. A. R.
- Subjects
DENGUE ,FACTOR analysis ,POPULATION density ,REGRESSION analysis ,LEAST squares ,MULTICOLLINEARITY ,INSECTICIDE resistance ,MOSQUITO control - Abstract
This research examined monthly dengue incidences per barangay (village) in Quezon City, Philippines over a period of six years (2010–2015) to determine the relative significance of environmental variables on dengue prevalence. The data were subjected to correlation analysis, spatial autocorrelation assessment, multiple factor analysis, ordinary least squares (OLS) and spatial regression. Local Indicators of Spatial Autocorrelation (LISA) Moran's I cluster maps indicate significant (p=0.05, 0.01) High-High clustering and Low-Low clustering in the northern and southern parts of the city, respectively. Monthly total cases indicated increasing trend staring from May/June, peaking at around August/September, and declining afterwards to lower levels in November/December. This corresponds to the typical temporal rainfall pattern. Dengue cases were found to be positively correlated (α=0.05) with Population (R=0.84), Informal_Settlements (IS) (R=0.716), Very_Low_Density_Residential (VLDR) (R=0.512), Open_Spaces (OS) (R=0.339), Mean_Rainfall (RFM) (R=0.637), and Mean Elevation (EM) (R=0.498). Dengue incidence (DI) was negatively correlated with Mean Air Temperature (ATM) (R=−0.3 to 0.5). Based on factor analysis, the dengue incidences were closely related to these variables, though factors F1 and F2 accounted for only 28% of the data variability. Ordinary Least Square (OLS) regression analysis of DI with general land use (LU) classes (e.g., no subclasses in residential areas) identified only IS and OS, explaining 43% of the variability of DI, with IS having twice as much influence on DI compared to OS. When residential subclasses are considered, VLDR was added to the model, slightly increasing R-squared to 0.452. Considering, in addition, EM, RFM, and ATM, the R-squared improved to 0.589, with RFM and EM considered more influential on dengue compared to IS and OS. ATM was however removed due to multicollinearity. The use of Spatial Error regression (SER) and Spatial Lag regression (SLR) produced improved models relative to the OLS model with R-squared of 0.676 and 0.667, respectively. This indicates the importance of spatial dependence. This can be explained by the fact that mosquitos fly over considerably long distances, traversing across the different barangays. The SER model (AIC=1359.89; SE=26.9584) is slightly better than the SLR model (AIC=1366.05; SE= 27.3399). [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
9. Incidental findings associated with magnetic resonance imaging of the brachial plexus
- Author
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Perumal, AR, Anyamele, UA, Bhogal, RK, McCauley, G, Teh, I, Bourke, G, Rankine, JJ, and Wade, RG
- Abstract
OBJECTIVE: The identification and management of incidental findings is becoming increasingly problematic, particularly in relation to brachial plexus imaging because the prevalence is unknown. Therefore, we aimed to estimate the prevalence of incidental findings in symptomatic patients undergoing MRI of the brachial plexus. METHODS: This retrospective cohort study included all children and adults who underwent MRI over a 12-year period, in a tertiary care centre in the UK. An incidental finding was any abnormality which was not a direct injury to or disease-process of the brachial plexus. An “incidentaloma” was defined by the need for further investigation or treatment. Multivariable logistic regression was used to estimate the odds ratio (OR) of an “incidentaloma”. To estimate which factors were associated with the incident rate ratio (IRR) of incidental findings, multivariable Poisson regression was used. RESULTS: Overall, 502 scans (72%) reported incidental anomalies. Although the number of MRIs performed per annum increased by 23%, the prevalence of “incidentalomas” remained static (p = 0.766). Musculoskeletal incidental findings were the most prevalent (63%) and when identified, there were a median of 3 incidental anomalies per patient. Overall, 125 (18%) anomalies were “incidentalomas” which required further investigation or treatment. The odds of having further investigation or treatment was strongly related to the frequency of incidental findings [adjusted OR 1.16 (95% CI 1.08, 1.24)] and when a tumour was identified [adjusted OR 2.86 (95% CI 1.81, 4.53)]. The number of incidental findings recorded per scan increased when trainees co-reported with consultants [adjusted IRR 0.36 (95% CI 0.05, 0.67)] and in the presence of a tumour [adjusted IRR 0.39 (95% CI 0.28, 0.49)] CONCLUSIONS: The prevalence of clinically important incidental findings on brachial plexus MRI is lower than organ-specific imaging, but still 18% of scans identified an ‘incidentaloma’ which required further investigation or treatment. ADVANCES IN KNOWLEDGE: This cohort study shows that approximately 1 in 5 symptomatic patients undergoing a brachial plexus MRI had a clinically important incidental findings, which required further investigation or treatment. This information can be used to inform patients consenting to clinical or research imaging.
- Published
- 2021
10. Accelerated fast spin echo diffusion spectrum imaging in the mouse heart ex-vivo
- Author
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Teh I, Lohezic M, Aksentijevic D, and Schneider JE
- Subjects
Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Published
- 2013
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11. The relationship between myocardial microstructure and strain in chronic infarcts, assessed using diffusion tensor imaging and feature tracking
- Author
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Sharrack, N, primary, Das, A, additional, Kelly, C, additional, Aldred, M, additional, Teh, I, additional, Stoeck, CT, additional, Kozerke, S, additional, Chowdhury, A, additional, Jex, N, additional, Ben-Arzi, H, additional, Swoboda, PP, additional, Greenwood, JP, additional, Plein, S, additional, Schneider, JE, additional, and Dall"armellina, E, additional
- Published
- 2021
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12. Microstructural characteristics of chronic infarct segments assessed using diffusion tensor imaging
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Das, A, primary, Kelly, C, additional, Teh, I, additional, Stoeck, C, additional, Kozerke, S, additional, Chowdhary, A, additional, Jex, N, additional, Thiranavukarasu, S, additional, Sharrack, N, additional, Ben-Arzi, H, additional, Aldred, M, additional, Greenwood, JP, additional, Plein, S, additional, Schneider, JE, additional, and Dallarmellina, E, additional
- Published
- 2021
- Full Text
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13. The Geometry of the roots of the Brachial Plexus
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Wade, RG, Bligh, ER, Nar, K, Stone, RS, Roberts, DJ, Teh, I, and Bourke, G
- Abstract
Diffusion tensor magnetic resonance imaging (DTI) can be used to reconstruct the brachial plexus in 3D via tracts connecting contiguous diffusion tensors with similar primary eigenvector orientations. When creating DTI tractograms, the turning angle of connecting lines (step angle) must be prescribed by the user; however, the literature is lacking detailed geometry of brachial plexus to inform such decisions. Therefore, the spinal cord and brachial plexus of 10 embalmed adult cadavers were exposed bilaterally by posterior dissection. Photographs were taken under standardised conditions and spatially calibrated in MATLAB. The roots of the brachial plexus were traced from the dorsal root entry zone for 5 cm laterally using a 2.5-mm2 Cartesian grid overlay. The trace was composed of points connected by lines, and the turning angle between line segments (the step angle) was resolved. Our data show that the geometry of the roots increased in tortuosity from C5 to T1, with no significant differences between sides. The 1st thoracic root had the most tortuous course, turning through a maximum angle of 56° per 2.5 mm (99% CI 44° to 70°). Significantly higher step angles and greater variability were observed in the medial 2 cm of the roots of the brachial plexus, where the dorsal and ventral rootlets coalesce to form the spinal root. Throughout the brachial plexus, the majority of step angles (>50%) were smaller than 20° and
- Published
- 2020
14. Improved compressed sensing and super-resolution of cardiac diffusion MRI with structure-guided total variation
- Author
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Teh, I, McClymont, D, Carruth, E, Omens, J, McCulloch, A, and Schneider, JE
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diffusion kurtosis ,Image Processing ,super-resolution ,diffusion tensor imaging ,Magnetic Resonance Imaging ,Rats ,Diffusion Magnetic Resonance Imaging ,Computer-Assisted ,directional total variation ,cardiac MRI ,Animals ,Algorithms ,compressed sensing ,Retrospective Studies - Abstract
Purpose\ud \ud Structure-guided total variation is a recently introduced prior that allows reconstruction of images using knowledge of the location and orientation of edges in a reference image. In this work, we demonstrate the advantages of a variant of structure-guided total variation known as directional total variation (DTV), over traditional total variation (TV), in the context of compressed-sensing reconstruction and super-resolution.\ud \ud \ud \ud Methods\ud \ud We compared TV and DTV in retrospectively undersampled ex vivo diffusion tensor imaging and diffusion spectrum imaging data from healthy, sham, and hypertrophic rat hearts.\ud \ud \ud \ud Results\ud \ud In compressed sensing at an undersampling factor of 8, the RMS error of mean diffusivity and fractional anisotropy relative to the fully sampled ground truth were 44% and 20% lower in DTV compared with TV. In super-resolution, these values were 29% and 14%, respectively. Similarly, we observed improvements in helix angle, transverse angle, sheetlet elevation, and sheetlet azimuth. The RMS error of the diffusion kurtosis in the undersampled data relative to the ground truth was uniformly lower (22% on average) with DTV compared to TV.\ud \ud \ud \ud Conclusion\ud \ud Acquiring one fully sampled non-diffusion-weighted image and 10 diffusion-weighted images at 8× undersampling would result in an 80% net reduction in data needed. We demonstrate efficacy of the DTV algorithm over TV in reducing data sampling requirements, which can be translated into higher apparent resolution and potentially shorter scan times. This method would be equally applicable in diffusion MRI applications outside the heart.
- Published
- 2020
15. Using Transcranial Direct Current Stimulation to Augment the Effect of Motor Imagery-Assisted Brain-Computer Interface Training in Chronic Stroke Patients—Cortical Reorganization Considerations
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Chew, E, Teo, Wei-Peng, Tang, N, Ang, KK, Ng, YS, Zhou, JH, Teh, I, Phua, KS, Zhao, L, Guan, C, Chew, E, Teo, Wei-Peng, Tang, N, Ang, KK, Ng, YS, Zhou, JH, Teh, I, Phua, KS, Zhao, L, and Guan, C
- Abstract
Introduction: Transcranial direct current stimulation (tDCS) has been shown to modulate cortical plasticity, enhance motor learning and post-stroke upper extremity motor recovery. It has also been demonstrated to facilitate activation of brain-computer interface (BCI) in stroke patients. We had previously demonstrated that BCI-assisted motor imagery (MI-BCI) can improve upper extremity impairment in chronic stroke participants. This study was carried out to investigate the effects of priming with tDCS prior to MI-BCI training in chronic stroke patients with moderate to severe upper extremity paresis and to investigate the cortical activity changes associated with training. Methods: This is a double-blinded randomized clinical trial. Participants were randomized to receive 10 sessions of 20-min 1 mA tDCS or sham-tDCS before MI-BCI, with the anode applied to the ipsilesional, and the cathode to the contralesional primary motor cortex (M1). Upper extremity sub-scale of the Fugl-Meyer Assessment (UE-FM) and corticospinal excitability measured by transcranial magnetic stimulation (TMS) were assessed before, after and 4 weeks after intervention. Results: Ten participants received real tDCS and nine received sham tDCS. UE-FM improved significantly in both groups after intervention. Of those with unrecordable motor evoked potential (MEP-) to the ipsilesional M1, significant improvement in UE-FM was found in the real-tDCS group, but not in the sham group. Resting motor threshold (RMT) of ipsilesional M1 decreased significantly after intervention in the real-tDCS group. Short intra-cortical inhibition (SICI) in the contralesional M1 was reduced significantly following intervention in the sham group. Correlation was found between baseline UE-FM score and changes in the contralesional SICI for all, as well as between changes in UE-FM and changes in contralesional RMT in the MEP- group. Conclusion: MI-BCI improved the motor function of the stroke-affected arm in chronic stroke p
- Published
- 2020
16. The effect of microvascular obstruction on the myocardial microstructure: a diffusion tensor imaging study
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Das, A, primary, Kelly, K, additional, Aldred, M, additional, Teh, I, additional, Stoeck, CK, additional, Kozerke, S, additional, Chowdhary, A, additional, Craven, T, additional, Jex, N, additional, Ben-Arzi, H, additional, Thirunavukarasu, S, additional, Greenwood, JP, additional, Plein, S, additional, Schneider, JE, additional, and Dallarmellina, E, additional
- Published
- 2021
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17. Investigation of the Role of Myocyte Orientations in Cardiac Arrhythmia Using Image-Based Models
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Whittaker, DG, Benson, AP, Teh, I, Schneider, JE, and Colman, MA
- Abstract
Cardiac electrical excitation-propagation is influenced by myocyte orientations (cellular organization). Quantitatively understanding this relationship presents a significant research challenge, especially during arrhythmias in which excitation patterns become complex. Tissue-scale simulations of cardiac electrophysiology, incorporating both dynamic action potential behavior and image-based myocardial architecture, provide an approach to investigate three-dimensional (3D) propagation of excitation waves in the heart. In this study, we aimed to assess the importance of natural variation in myocyte orientations on cardiac arrhythmogenesis using 3D tissue electrophysiology simulations. Three anatomical models (i.e., describing myocyte orientations) of healthy rat ventricles—obtained using diffusion tensor imaging at 100 μm resolution—were registered to a single biventricular geometry (i.e., a single cardiac shape), in which the myocyte orientations could be represented by each of the diffusion tensor imaging data sets or by an idealized rule-based description. The Fenton-Karma cellular excitation model was modified to reproduce rat ventricular action potential duration restitution to create reaction-diffusion cardiac electrophysiology models. Over 250 3D simulations were performed to investigate the effects of myocyte orientations on the following: 1) ventricular activation, 2) location-dependent arrhythmia induction via rapid pacing, and 3) dynamics of re-entry averaged over multiple episodes. It was shown that 1) myocyte orientation differences manifested themselves in local activation times, but the influence on total activation time was small; 2) differences in myocyte orientations could critically affect the inducibility and persistence of arrhythmias for specific stimulus-location/cycle-length combinations; and 3) myocyte orientations alone could be an important determinant of scroll wave break, although no significant differences were observed in averaged arrhythmia dynamics between the four myocyte orientation scenarios considered. Our results show that myocyte orientations are an important determinant of arrhythmia inducibility, persistence, and scroll wave break. These findings suggest that where specificity is desired (for example, when predicting location-dependent, patient-specific arrhythmia inducibility), subject-specific myocyte orientations may be important.
- Published
- 2019
18. Prospective acceleration of diffusion tensor imaging with compressed sensing using adaptive dictionaries
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McClymont D, Teh I, Hj, Whittington, Vicente Grau, and Je, Schneider
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Preclinical and Clinical Imaging – Full Papers ,prospective undersampling ,Full Paper ,Phantoms, Imaging ,adaptive dictionaries ,Reproducibility of Results ,Heart ,Signal Processing, Computer-Assisted ,Data Compression ,Image Enhancement ,diffusion tensor imaging ,Sensitivity and Specificity ,Pattern Recognition, Automated ,Rats ,Rats, Sprague-Dawley ,diffusion MRI ,heart structure ,Diffusion Magnetic Resonance Imaging ,Subtraction Technique ,Image Interpretation, Computer-Assisted ,Animals ,Algorithms ,compressed sensing - Abstract
Purpose: Diffusion MRI requires acquisition of multiple diffusion‐weighted images, resulting in long scan times. Here, we investigate combining compressed sensing and a fast imaging sequence to dramatically reduce acquisition times in cardiac diffusion MRI. Methods: Fully sampled and prospectively undersampled diffusion tensor imaging data were acquired in five rat hearts at acceleration factors of between two and six using a fast spin echo (FSE) sequence. Images were reconstructed using a compressed sensing framework, enforcing sparsity by means of decomposition by adaptive dictionaries. A tensor was fit to the reconstructed images and fiber tractography was performed. Results: Acceleration factors of up to six were achieved, with a modest increase in root mean square error of mean apparent diffusion coefficient (ADC), fractional anisotropy (FA), and helix angle. At an acceleration factor of six, mean values of ADC and FA were within 2.5% and 5% of the ground truth, respectively. Marginal differences were observed in the fiber tracts. Conclusion: We developed a new k‐space sampling strategy for acquiring prospectively undersampled diffusion‐weighted data, and validated a novel compressed sensing reconstruction algorithm based on adaptive dictionaries. The k‐space undersampling and FSE acquisition each reduced acquisition times by up to 6× and 8×, respectively, as compared to fully sampled spin echo imaging. Magn Reson Med 76:248–258, 2016.
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- 2019
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19. Longitudinal changes in diffusion tensor imaging parameters following acute ST-elevation myocardial infarction
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Das, A, Kelly, C, Teh, I, Stoeck, CT, Kozerke, S, Brown, L, Saunderson, CED, Craven, T, Swoboda, PP, Levelt, E, Greenwood, JP, Plein, S, Schneider, JE, and Dall'Armellina, E
- Published
- 2019
20. P11.13 Radiotherapy combined with a multimodal imaging approach in a glioblastoma preclinical model
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Salvatore, D, primary, Shaw, G, additional, Wright, J, additional, Teh, I, additional, Koch-Paszkowski, J, additional, Murray, L, additional, Scarsbrook, A, additional, Schneider, J, additional, Ottobrini, L, additional, and Short, S, additional
- Published
- 2019
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21. 542Longitudinal changes in diffusion tensor imaging parameters following acute ST-elevation myocardial infarction
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Das, A, primary, Kelly, C, additional, Teh, I, additional, Stoeck, C T, additional, Kozerke, S, additional, Brown, L A E, additional, Saunderson, C E D, additional, Craven, T, additional, Swoboda, P P, additional, Levelt, E, additional, Greenwood, J P, additional, Plein, S, additional, Schneider, J E, additional, and Dallarmellina, E, additional
- Published
- 2019
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22. Prognostic prediction across a gradient of total tumor volume in patients with hepatocellular carcinoma undergoing locoregional therapy
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Lin Han C, Su Chien W, Huang Yi H, Hsu Chia Y, Huo Teh I, Lee Rheun C, Chiou Yi Y, Chiang Jen H, Lee Pui C, and Lee Shou D
- Subjects
Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background The size and number of tumors are important prognostic indicators for hepatocellular carcinoma (HCC). However, it is difficult to assess the prognosis for patients with a variable number and size of tumors. By combining these two factors, we investigated the role and prognostic accuracy of total tumor volume (TTV) for HCC. Methods A total of 786 patients undergoing locoregional therapy (transarterial chemoembolization, percutaneous radiofrequency ablation and acetic acid or ethanol injection) for HCC were prospectively evaluated. Results The mean and median TTV was 177 cm3 (range, 0.1-3,591 cm3) and 21 cm3, respectively. Of all, 38%, 29%, 15%, 7% and 11% of patients had TTV of 3, 10-50 cm3, 50-200 cm3, 200-500 cm3 and >500 cm3, respectively. TTV was significantly larger in patients with higher serum α-fetoprotein (AFP) levels or with vascular invasion. The Child-Turcotte-Pugh score, performance status, vascular invasion, AFP level and TTV were significant independent prognostic predictors in the Cox proportional hazards model. After adjustment, patients with TTV 50-200 cm3 (relative risk [RR]: 1.74, p = 0.009), 200-500 cm3 (RR: 2.15, p = 0.006) and >500 cm3 (RR: 3.92, p < 0.001) had a significantly increased mortality risk in comparison to patients with TTV 3. Conclusions TTV is a feasible prognostic predictor across a wide gradient and can be used to predict the mortality risk of HCC. Selecting appropriate cutoffs of TTV may help refine the design of cancer staging system and treatment planning. Future clinical trials of HCC may include this parameter for mortality risk stratification.
- Published
- 2010
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23. Monte Carlo Simulations of Diffusion Weighted MRI in Myocardium: Validation and Sensitivity Analysis
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Bates, J, McClymont, D, Teh, I, Kohl, P, Schneider, J, Grau, V, Biotechnology and Biological Sciences Research Cou, Commission of the European Communities, and British Heart Foundation
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Technology ,RAT-HEART ,Quantitative Biology::Tissues and Organs ,Physics::Medical Physics ,heart ,REGIONAL DIFFERENCES ,09 Engineering ,Engineering ,LEFT-VENTRICULAR HYPERTROPHY ,diffusion weighted imaging ,tissue modelling ,Imaging Science & Photographic Technology ,Engineering, Biomedical ,ANISOTROPY ,08 Information And Computing Sciences ,Science & Technology ,HYPERTENSION ,Radiology, Nuclear Medicine & Medical Imaging ,Engineering, Electrical & Electronic ,WATER DIFFUSION ,TENSOR MRI ,Nuclear Medicine & Medical Imaging ,MYOCYTE SIZE ,SELF-DIFFUSION ,Computer Science ,Computer Science, Interdisciplinary Applications ,Life Sciences & Biomedicine ,CARDIAC FIBER STRUCTURE ,MRI - Abstract
A model of cardiac microstructure and diffusion MRI is presented, and compared with experimental data from ex vivo rat hearts. The model includes a simplified representation of individual cells, with physiologically correct cell size and orientation, as well as intra- to extracellular volume ratio. Diffusion MRI is simulated using a Monte Carlo model and realistic MRI sequences. The results show good correspondence between the simulated and experimental MRI signals. Similar patterns are observed in the eigenvalues of the diffusion tensor, the mean diffusivity (MD), and the fractional anisotropy (FA). A sensitivity analysis shows that the diffusivity is the dominant influence on all three eigenvalues of the diffusion tensor, the MD, and the FA. The area and aspect ratio of the cell cross-section affect the secondary and tertiary eigenvalues, and hence the FA. Within biological norms, the cell length, volume fraction of cells, and rate of change of helix angle play a relatively small role in influencing tissue diffusion. Results suggest that the model could be used to improve understanding of the relationship between cardiac microstructure and diffusion MRI measurements, as well as in testing and refinement of cardiac diffusion MRI protocols.
- Published
- 2017
24. Evaluation of noise removal algorithms for imaging and reconstruction of vascular networks using micro-CT
- Author
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Davidoiu, V, Hadjilucas, L, Teh, I, Smith, N, Lee, J, and Schneider, J
- Subjects
Computer Science::Computer Vision and Pattern Recognition - Abstract
Micro-computed tomography systems are widely used for high-resolution, non-destructive analysis of internal microvascular networks. When the scale of the targeted vessel approaches the imaging resolution limit, the level of noise becomes a limiting factor for accurate reconstruction. Denoising algorithms provided by vendors are often suboptimal for enhancing SNR of fine (vessel) features. Furthermore, the performance of existing methods has not been systematically analyzed in the context of final network reconstruction and graph model extraction. This work evaluates several standard and state-of-the-art noise reduction techniques using both in silico and physical phantoms, and ex vivo rat coronary data for their ability to improve vascular network analysis. We compared five noise reduction approaches, including vendor-supplied (Gaussian smoothing), conventional (median filter) and advanced (i.e. wavelet filter with soft thresholding, block-matching collaborative filtering (BM3D), and isotropic and anisotropic total variation denoising) techniques. The latter two methods were chosen for their reported ability to preserve fine details, a prerequisite for a successful microvascular extraction. The full evaluation pipeline included the reconstruction from projection images, denoising, vascular segmentation and graph model extraction to be performed on all simulated and real image data sets. SNR, CNR and 3D NPS were quantified from denoised images, and where the ground truth was known, Sørensen–Dice coefficients, Jaccard index metrics were calculated as measures of segmentation error. The performance of the image denoising algorithms where the ground-truth was available has been assessed by computing the correlation coefficients between the residual images (obtained between the noise-free data and the denoised data) and the first derivative of the noise-free data were computed. Overall, simpler denoising techniques including the median and wavelet filters and the vendor-supplied implementations have been found to perform inadequately for segmentation of fine vessel features, particularly on real images. BM3D technique performed well in most of our tests, however isotropic total variation (ITV) was the optimal choice for noise reduction and feature preservation in real data as shown by the extracted network models. Globally, ITV increased the SNR from 10.2 to 31.7 dB in a Shepp Logan phantom, doubled SNR and CNR values in a scanned physical phantom compared with BM3D, enabled the smallest vessels to be fully recovered in an in silicon phantom and achieved a near-ideal outcome in the rat coronary data.
- Published
- 2016
25. Robust and high resolution hyperpolarized metabolic imaging of the rat heart at 7 t with 3d spectral-spatial EPI
- Author
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Miller, JJ, Lau, AZ, Teh, I, Schneider, JE, Kinchesh, P, Smart, S, Ball, V, Sibson, NR, and Tyler, DJ
- Subjects
Male ,Carbon Isotopes ,hyperpolarized 13C ,metabolic imaging ,Full Paper ,Echo-Planar Imaging ,pulse sequences ,pyruvate ,Heart ,Signal-To-Noise Ratio ,cardiac imaging ,Rats ,cardiac metabolism ,Imaging, Three-Dimensional ,Animals ,Rats, Wistar ,Imaging Methodology – Full Papers ,hyperpolarized C ,Algorithms - Abstract
Purpose Hyperpolarized metabolic imaging has the potential to revolutionize the diagnosis and management of diseases where metabolism is dysregulated, such as heart disease. We investigated the feasibility of imaging rodent myocardial metabolism at high resolution at 7 T. Methods We present here a fly‐back spectral‐spatial radiofrequency pulse that sidestepped maximum gradient strength requirements and enabled high resolution metabolic imaging of the rodent myocardium. A 3D echo‐planar imaging readout followed, with centric ordered z‐phase encoding. The cardiac gated sequence was used to image metabolism in rodents whose metabolic state had been manipulated by being fasted, fed, or fed and given the pyruvate dehydrogenase kinase inhibitor dichloroacetate. Results We imaged hyperpolarized metabolites with a spatial resolution of 2×2×3.8 mm3 and a temporal resolution of 1.8 s in the rat heart at 7 T. Significant differences in myocardial pyruvate dehydrogenase flux were observed between the three groups of animals, concomitant with the known biochemistry. Conclusion The proposed sequence was able to image in vivo metabolism with excellent spatial resolution in the rat heart. The field of view enabled the simultaneous multi‐organ acquisition of metabolic information from the rat, which is of great utility for preclinical research in cardiovascular disease. Magn Reson Med 000:000–000, 2015. © 2015 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. Magn Reson Med 75:1515–1524, 2016. © 2015 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance.
- Published
- 2016
- Full Text
- View/download PDF
26. Resolving fine cardiac structures in rats with high-resolution diffusion tensor imaging
- Author
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Teh, I, McClymont, D, Burton, R, Maguire, M, Whittington, H, Lygate, C, Kohl, P, Schneider, J, Biotechnology and Biological Sciences Research Cou, Commission of the European Communities, and British Heart Foundation
- Abstract
Cardiac architecture is fundamental to cardiac function and can be assessed non-invasively with diffusion tensor imaging (DTI). Here, we aimed to overcome technical challenges in ex vivo DTI in order to extract fine anatomical details and to provide novel insights in the 3D structure of the heart. An integrated set of methods was implemented in ex vivo rat hearts, including dynamic receiver gain adjustment, gradient system scaling calibration, prospective adjustment of diffusion gradients, and interleaving of diffusion-weighted and non-diffusion-weighted scans. Together, these methods enhanced SNR and spatial resolution, minimised orientation bias in diffusion-weighting, and reduced temperature variation, enabling detection of tissue structures such as cell alignment in atria, valves and vessels at an unprecedented level of detail. Improved confidence in eigenvector reproducibility enabled tracking of myolaminar structures as a basis for segmentation of functional groups of cardiomyocytes. Ex vivo DTI facilitates acquisition of high quality structural data that complements readily available in vivo cardiac functional and anatomical MRI. The improvements presented here will facilitate next generation virtual models integrating micro-structural and electro-mechanical properties of the heart.
- Published
- 2016
27. Anomalous diffusion in cardiac tissue as an index of myocardial microstructure
- Author
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Bueno Orovio, A, Teh, I, Schneider, J, Burrage, K, and Grau, V
- Abstract
Diffusion in biological tissues is known to be hindered by the structural complexity of the underlying medium. In the heart, improved characterisation on how this complexity influences acquired diffusion weighted signals is key to advancing our interpretation of diffusion magnetic resonance imaging, as well as to propose novel biomarkers to further characterise myocardial microstructure. In this work, we propose stretched Mittag–Leffler signal decay models for the quantification of the anomalous decay observed in acquired diffusion weighted signals. Our results, analysed in ex vivo healthy, fixed rat ventricles, indicate that such a representation suffices to capture the anomalous signal decay observed in the myocardial syncytium. The subdiffusive order of signal decay is shown to encode independent information to that encapsulated by standard diffusion tensor metrics, and thus may provide additional information on tissue microstructure. Moreover, subdiffusion gradients are shown to be indicative of the total structural heterogeneity spanning the left ventricular wall, which includes progressive myolaminae branching and spatially varying densities of perimysial collagen, microvasculature and adipose tissue. The proposed approach may therefore have important implications for the characterisation of tissue microstructure, both in cardiac and other tissue types.
- Published
- 2016
28. Salmonella Infantis im Geflügelfleisch auf dem Markt in Kroatien
- Author
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Brigita Hengl, Mr. sc. Jasenka Petrić, dipl.ing.preh.teh, Andrea Gross – Bošković preh. teh. i bioteh., Ana Marija Crnić, dipl.ing.preh.teh., Kristina Vuljanić, dipl.ing.preh.teh., and Ružica Vazdar, dipl.ing.preh.teh.
- Subjects
Salmonella Infantis ,carne di pollo ,prevalenza ,Hähnchenfleisch ,Prävalenz ,carne de pollo ,prevalencia ,pileće meso ,prevalencija ,chicken meat ,prevalence - Abstract
Salmonella Infantis patogena je bakterija čija je prevalencija u porastu u primarnoj proizvodnji, u mesu peradi, ali i u humanim izolatima u više europskih zemalja. Veća pojavnost ove bakterije uočena je u centralnim i istočnim zemljama članicama Europske unije (Rumunjska, Italija, Slovenija, Austrija), a prema izvještaju Europskog centra za sprječavanje i kontrolu bolesti (ECDC) za 2014. god., S. Infantis bila je četvrti najčešći serovar salmonele kod ljudi, dok je najčešći serovar izoliran u jatima brojlera u zemljama EU. Prevalencija S. Infanits u jatima pilića u porastu je od 2011. godine, dok izostaju podaci o prevalenciji u mesu pilića na tržištu Hrvatske. U ovom radu prikazana je pojavnost S. Infantis u uzorcima svježeg i zamrznutog pilećeg mesa na tržištu Republike Hrvatske koji su prikupljeni tijekom 2015. godine. Uzorkovanje je provedeno u okviru nadzora od strane sanitarne inspekcije Ministarstva zdravlja, a uzorci su na anali¬zu slani u županijske zavode za javno zdravstvo. Od ukupno 474 uzoraka pilećeg mesa obuhvaćenih nadzorom, 51 uzorak bio je pozitivan na Salmonella spp., a S. Infantis je bila najčešće izolirani serovar (88,2 %)., Salmonella Infantis are pathogenic bacteria whose prevalence in primary production of poultry meat and human isolates from several European countries is on the rise. According to the report of the European Centre for Disease Prevention and Control (ECDC) published in 2014, a higher incidence of these bacte¬ria was also observed in Central and Eastern European EU Member States (Romania, Italy, Slovenia, Austria). S. Infantis was the fourth most common serovar of Salmonella in humans. The most common serovar in broiler flocks was isolated in the EU. The prevalence of S. Infanits in flocks of chickens was on the rise since 2011. However, the data on its prevalence in chicken meat on the Croatian market is not available. This paper looks at the incidence of S. Infantis in samples of fresh and frozen chicken meat collected on the Croatian market during 2015. The sampling was performed within the framework of Ministry of Health sanitary inspection monitoring, and collected samples were analysed in due county public health institutes. From the total of 474 chicken meat sam¬ples included in monitoring, 51 samples were culture positive for Salmonella spp, while S. Infantis represented the most frequently isolated serovar (88.2 %)., Bei der Salmonella Infantis handelt es sich um eine pathogene Bakterie, deren Prävalenz in der Primärindustrie, im Geflügelfleisch, aber auch in den humanen Isolaten, in mehreren europäischen Ländern eine steigende Tendenz aufweist. Eine größere Prävalenz dieser Bakterie wurde laut Bericht des Europäischen Zentrums für die Prävention und Kontrolle von Krankheiten (ECDC) für 2014 in den zentral- und osteuropäischen EU-Mitgliedsstaaten beobachtet (Rumänien, Italien, Slowenien, Österreich). Die S. Infantis war der vierte häufigste Salmonellen-Serotyp bei Men¬schen, und der am häufigsten in den Broilerstämmen der EU-Länder isolierte Serotyp. Die Prävalenz der S. Infanits in den Hähnchenscharen weist seit 2011 eine steigende Tendenz auf; Angaben über die Prävalenz im Hähnchenfleisch auf dem kroatischen Markt sind ausgeblieben. In dieser Arbeit wurde die Prävalenz der S. Infantis in frischen und gefrorenen in 2015 gesammelten Hähnchenfleischproben auf dem Markt der Repu¬blik Kroatien dargestellt. Die Proben wurden im Rahmen eines Monitorings der Sanitärinspektion des Ministeriums für Gesundheit entnommen und zur Auswertung an regionale Institute für öffentliche Gesundheit geschickt. Von den insgesamt 474 Proben des vom Monitoring erfassten Hähnchenfleischs waren 51 Proben positiv auf die Salmonella spp, wobei die S. Infantis der am häufigsten isolierte Serotyp war (88,2 %)., La Salmonella Infantis è un batterio patogeno la cui prevalenza è in crescita nella produzione primaria, sia nella carne di pollo, sia negli isolati umani in diversi paesi europei. Secondo il rapporto del Centro europeo per la prevenzione ed il controllo delle malattie (ECDC) per il 2014, è stata riscontrata una maggiore manifestazione di questo batterio in alcuni paesi membri dell’Unione europea collocati nell’Europa centro-orientale (Romania, Italia, Slovenia e Austria). Dal rapporto risulta, infatti, che la S. Infantis è il quarto sierotipo più frequentemente isolato tra gli uomini, ed il primo in assoluto tra le batterie di polli da carne (brojler) nei paesi dell’UE. La prevalenza della S. Infantis nelle batterie di polli da carne è in crescita dal 2011, mentre mancano i dati sulla prevalenza nella carne di pollo commercializzata in Croazia. In questo studio viene illustrato il manifestarsi della S. Infantis nei campioni di carne di pollo fresca e congelata commercializzata nella Repubblica di Croazia, prelevati nel corso del 2015. Il campionamento è stato operato nell’ambito dell’attività di monitoring svolta dall’Ispettorato d’igiene e sanità pubblica presso il Ministero della Salute, mentre i campioni sono stati analizzati presso gli istituti regionali di salute pubblica. Su un totale di 474 campioni di carne di pollo compresi nell’attività di monitoraggio, 51 campioni sono risultati positivi alla Salmonella spp, mentre la S. Infantis è stato il sierotipo più frequentemente isolato (88,2%)., Salmonella Infantis es una bacteria patógena cuya prevalencia está creciendo en la producción primaria, en la carne de aves del corral, pero también en los aislantes humanos en muchos países europeos. Mayor aparición de esta bacteria es notada en los países centrales y orientales de los estados miembros de la UE (Rumania, Italia, Eslovenia, Austria), y según el informe del Centro Europeo para la Prevención y Control de Enfermedades (ECDC) para el año 2014. S. Infantis ha sido el cuarto serotipo más frecuente de la salmonella en la gente, mientras que el serotipo más frecuente aislado en averíos de los pollos broiler en los países de la UE. La prevalencia de S. Infanits en averíos de pollos está creciendo desde el año 2011, mientras que están ausentes los datos de la prevalencia en la carne de polluelos en el mercado de Croacia. En esta obra está demostrada la aparición de S. Infantis en especímenes de la carne fresca y congelada en el mercado de la República Croacia que han sido recogidos durante el año 2015. El muestreo es implementado dentro de la monitorización por parte de la inspección sanitaria del Ministerio de Salud, y los especímenes han sido enviados a un análisis a los institutos condales para la salud pública. De los 474 especímenes totales de la carne de pollo abarcada de la monitorización, los 51 especímenes han sido positivos en Salmonella spp, mientras que S. Infantis ha sido el serotipo aislado más frecuente (88,2 %).
- Published
- 2016
29. Cardiac diffusion-weighted and tensor imaging: a Society for Cardiovascular Magnetic Resonance (SCMR) special interest group consensus statement
- Author
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Dall’Armellina, E., Ennis, D.B., Axel, L., Croisille, P., Ferreira, P.F., Gotschy, A., Lohr, D., Moulin, K., Nguyen, C., Nielles-Vallespin, S., Romero, W., Scott, A.D., Stoeck, C., Teh, I., Tunnicliffe, L., Viallon, M., Wang, Young, A.A., Schneider, J.E., and Sosnovik, D.E.
- Abstract
Thanks to recent developments in Cardiovascular magnetic resonance (CMR), cardiac diffusion-weighted magnetic resonance is fast emerging in a range of clinical applications. Cardiac diffusion-weighted imaging (cDWI) and diffusion tensor imaging (cDTI) now enable investigators and clinicians to assess and quantify the 3D microstructure of the heart. Free-contrast DWI is uniquely sensitized to the presence and displacement of water molecules within the myocardial tissue, including the intra-cellular, extra-cellular and intra-vascular spaces. CMR can determine changes in microstructure by quantifying: a) mean diffusivity (MD) –measuring the magnitude of diffusion; b) fractional anisotropy (FA) – specifying the directionality of diffusion; c) helix angle (HA) and transverse angle (TA) –indicating the orientation of the cardiomyocytes; d) E2A and E2A mobility – measuring the alignment and systolic-diastolic mobility of the sheetlets, respectively.
- Published
- 2024
- Full Text
- View/download PDF
30. Salmonella Infantis u pilećem mesu na tržištu u Hrvatskoj
- Author
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Brigita Hengl, Mr. sc. Jasenka Petrić, dipl.ing.preh.teh, Andrea Gross – Bošković preh. teh. i bioteh., Ana Marija Crnić, dipl.ing.preh.teh., Kristina Vuljanić, dipl.ing.preh.teh., Ružica Vazdar, dipl.ing.preh.teh., Brigita Hengl, Mr. sc. Jasenka Petrić, dipl.ing.preh.teh, Andrea Gross – Bošković preh. teh. i bioteh., Ana Marija Crnić, dipl.ing.preh.teh., Kristina Vuljanić, dipl.ing.preh.teh., and Ružica Vazdar, dipl.ing.preh.teh.
- Abstract
Salmonella Infantis patogena je bakterija čija je prevalencija u porastu u primarnoj proizvodnji, u mesu peradi, ali i u humanim izolatima u više europskih zemalja. Veća pojavnost ove bakterije uočena je u centralnim i istočnim zemljama članicama Europske unije (Rumunjska, Italija, Slovenija, Austrija), a prema izvještaju Europskog centra za sprječavanje i kontrolu bolesti (ECDC) za 2014. god., S. Infantis bila je četvrti najčešći serovar salmonele kod ljudi, dok je najčešći serovar izoliran u jatima brojlera u zemljama EU. Prevalencija S. Infanits u jatima pilića u porastu je od 2011. godine, dok izostaju podaci o prevalenciji u mesu pilića na tržištu Hrvatske. U ovom radu prikazana je pojavnost S. Infantis u uzorcima svježeg i zamrznutog pilećeg mesa na tržištu Republike Hrvatske koji su prikupljeni tijekom 2015. godine. Uzorkovanje je provedeno u okviru nadzora od strane sanitarne inspekcije Ministarstva zdravlja, a uzorci su na anali¬zu slani u županijske zavode za javno zdravstvo. Od ukupno 474 uzoraka pilećeg mesa obuhvaćenih nadzorom, 51 uzorak bio je pozitivan na Salmonella spp., a S. Infantis je bila najčešće izolirani serovar (88,2 %)., Salmonella Infantis are pathogenic bacteria whose prevalence in primary production of poultry meat and human isolates from several European countries is on the rise. According to the report of the European Centre for Disease Prevention and Control (ECDC) published in 2014, a higher incidence of these bacte¬ria was also observed in Central and Eastern European EU Member States (Romania, Italy, Slovenia, Austria). S. Infantis was the fourth most common serovar of Salmonella in humans. The most common serovar in broiler flocks was isolated in the EU. The prevalence of S. Infanits in flocks of chickens was on the rise since 2011. However, the data on its prevalence in chicken meat on the Croatian market is not available. This paper looks at the incidence of S. Infantis in samples of fresh and frozen chicken meat collected on the Croatian market during 2015. The sampling was performed within the framework of Ministry of Health sanitary inspection monitoring, and collected samples were analysed in due county public health institutes. From the total of 474 chicken meat sam¬ples included in monitoring, 51 samples were culture positive for Salmonella spp, while S. Infantis represented the most frequently isolated serovar (88.2 %)., Bei der Salmonella Infantis handelt es sich um eine pathogene Bakterie, deren Prävalenz in der Primärindustrie, im Geflügelfleisch, aber auch in den humanen Isolaten, in mehreren europäischen Ländern eine steigende Tendenz aufweist. Eine größere Prävalenz dieser Bakterie wurde laut Bericht des Europäischen Zentrums für die Prävention und Kontrolle von Krankheiten (ECDC) für 2014 in den zentral- und osteuropäischen EU-Mitgliedsstaaten beobachtet (Rumänien, Italien, Slowenien, Österreich). Die S. Infantis war der vierte häufigste Salmonellen-Serotyp bei Men¬schen, und der am häufigsten in den Broilerstämmen der EU-Länder isolierte Serotyp. Die Prävalenz der S. Infanits in den Hähnchenscharen weist seit 2011 eine steigende Tendenz auf; Angaben über die Prävalenz im Hähnchenfleisch auf dem kroatischen Markt sind ausgeblieben. In dieser Arbeit wurde die Prävalenz der S. Infantis in frischen und gefrorenen in 2015 gesammelten Hähnchenfleischproben auf dem Markt der Repu¬blik Kroatien dargestellt. Die Proben wurden im Rahmen eines Monitorings der Sanitärinspektion des Ministeriums für Gesundheit entnommen und zur Auswertung an regionale Institute für öffentliche Gesundheit geschickt. Von den insgesamt 474 Proben des vom Monitoring erfassten Hähnchenfleischs waren 51 Proben positiv auf die Salmonella spp, wobei die S. Infantis der am häufigsten isolierte Serotyp war (88,2 %)., La Salmonella Infantis è un batterio patogeno la cui prevalenza è in crescita nella produzione primaria, sia nella carne di pollo, sia negli isolati umani in diversi paesi europei. Secondo il rapporto del Centro europeo per la prevenzione ed il controllo delle malattie (ECDC) per il 2014, è stata riscontrata una maggiore manifestazione di questo batterio in alcuni paesi membri dell’Unione europea collocati nell’Europa centro-orientale (Romania, Italia, Slovenia e Austria). Dal rapporto risulta, infatti, che la S. Infantis è il quarto sierotipo più frequentemente isolato tra gli uomini, ed il primo in assoluto tra le batterie di polli da carne (brojler) nei paesi dell’UE. La prevalenza della S. Infantis nelle batterie di polli da carne è in crescita dal 2011, mentre mancano i dati sulla prevalenza nella carne di pollo commercializzata in Croazia. In questo studio viene illustrato il manifestarsi della S. Infantis nei campioni di carne di pollo fresca e congelata commercializzata nella Repubblica di Croazia, prelevati nel corso del 2015. Il campionamento è stato operato nell’ambito dell’attività di monitoring svolta dall’Ispettorato d’igiene e sanità pubblica presso il Ministero della Salute, mentre i campioni sono stati analizzati presso gli istituti regionali di salute pubblica. Su un totale di 474 campioni di carne di pollo compresi nell’attività di monitoraggio, 51 campioni sono risultati positivi alla Salmonella spp, mentre la S. Infantis è stato il sierotipo più frequentemente isolato (88,2%)., Salmonella Infantis es una bacteria patógena cuya prevalencia está creciendo en la producción primaria, en la carne de aves del corral, pero también en los aislantes humanos en muchos países europeos. Mayor aparición de esta bacteria es notada en los países centrales y orientales de los estados miembros de la UE (Rumania, Italia, Eslovenia, Austria), y según el informe del Centro Europeo para la Prevención y Control de Enfermedades (ECDC) para el año 2014. S. Infantis ha sido el cuarto serotipo más frecuente de la salmonella en la gente, mientras que el serotipo más frecuente aislado en averíos de los pollos broiler en los países de la UE. La prevalencia de S. Infanits en averíos de pollos está creciendo desde el año 2011, mientras que están ausentes los datos de la prevalencia en la carne de polluelos en el mercado de Croacia. En esta obra está demostrada la aparición de S. Infantis en especímenes de la carne fresca y congelada en el mercado de la República Croacia que han sido recogidos durante el año 2015. El muestreo es implementado dentro de la monitorización por parte de la inspección sanitaria del Ministerio de Salud, y los especímenes han sido enviados a un análisis a los institutos condales para la salud pública. De los 474 especímenes totales de la carne de pollo abarcada de la monitorización, los 51 especímenes han sido positivos en Salmonella spp, mientras que S. Infantis ha sido el serotipo aislado más frecuente (88,2 %).
- Published
- 2016
31. Prognostic prediction across a gradient of total tumor volume in patients with hepatocellular carcinoma undergoing locoregional therapy
- Author
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Chia Y Hsu, Chien W Su, Han C Lin, Pui C Lee, Shou D Lee, Jen H Chiang, Yi H Huang, Rheun Chuan Lee, Yi Y Chiou, and Teh I Huo
- Subjects
Adult ,Male ,medicine.medical_specialty ,Carcinoma, Hepatocellular ,viruses ,Gastroenterology ,Statistics, Nonparametric ,Predictive Value of Tests ,Internal medicine ,medicine ,Carcinoma ,Humans ,lcsh:RC799-869 ,Chemoembolization, Therapeutic ,Karnofsky Performance Status ,Survival analysis ,Cancer staging ,Acetic Acid ,Aged ,Neoplasm Staging ,Proportional Hazards Models ,Aged, 80 and over ,Performance status ,Ethanol ,business.industry ,Proportional hazards model ,Liver Neoplasms ,General Medicine ,respiratory system ,Middle Aged ,medicine.disease ,Prognosis ,Survival Analysis ,digestive system diseases ,Tumor Burden ,body regions ,Relative risk ,Hepatocellular carcinoma ,Predictive value of tests ,embryonic structures ,Catheter Ablation ,lcsh:Diseases of the digestive system. Gastroenterology ,Female ,alpha-Fetoproteins ,business ,Research Article - Abstract
Background The size and number of tumors are important prognostic indicators for hepatocellular carcinoma (HCC). However, it is difficult to assess the prognosis for patients with a variable number and size of tumors. By combining these two factors, we investigated the role and prognostic accuracy of total tumor volume (TTV) for HCC. Methods A total of 786 patients undergoing locoregional therapy (transarterial chemoembolization, percutaneous radiofrequency ablation and acetic acid or ethanol injection) for HCC were prospectively evaluated. Results The mean and median TTV was 177 cm3 (range, 0.1-3,591 cm3) and 21 cm3, respectively. Of all, 38%, 29%, 15%, 7% and 11% of patients had TTV of 3, 10-50 cm3, 50-200 cm3, 200-500 cm3 and >500 cm3, respectively. TTV was significantly larger in patients with higher serum α-fetoprotein (AFP) levels or with vascular invasion. The Child-Turcotte-Pugh score, performance status, vascular invasion, AFP level and TTV were significant independent prognostic predictors in the Cox proportional hazards model. After adjustment, patients with TTV 50-200 cm3 (relative risk [RR]: 1.74, p = 0.009), 200-500 cm3 (RR: 2.15, p = 0.006) and >500 cm3 (RR: 3.92, p < 0.001) had a significantly increased mortality risk in comparison to patients with TTV 3. Conclusions TTV is a feasible prognostic predictor across a wide gradient and can be used to predict the mortality risk of HCC. Selecting appropriate cutoffs of TTV may help refine the design of cancer staging system and treatment planning. Future clinical trials of HCC may include this parameter for mortality risk stratification.
- Published
- 2010
32. Prognostic prediction across a gradient of total tumor volume in patients with hepatocellular carcinoma undergoing locoregional therapy
- Author
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Huo, Teh I, primary, Hsu, Chia Y, additional, Huang, Yi H, additional, Su, Chien W, additional, Lin, Han C, additional, Lee, Rheun C, additional, Chiou, Yi Y, additional, Chiang, Jen H, additional, Lee, Pui C, additional, and Lee, Shou D, additional
- Published
- 2010
- Full Text
- View/download PDF
33. 542 Longitudinal changes in diffusion tensor imaging parameters following acute ST-elevation myocardial infarction.
- Author
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Das, A, Kelly, C, Teh, I, Stoeck, C T, Kozerke, S, Brown, L A E, Saunderson, C E D, Craven, T, Swoboda, P P, Levelt, E, Greenwood, J P, Plein, S, Schneider, J E, and Dallarmellina, E
- Subjects
CONFERENCES & conventions ,MAGNETIC resonance imaging ,MYOCARDIAL infarction - Published
- 2019
- Full Text
- View/download PDF
34. On the correction of spiral trajectories on a preclinical MRI scanner with a high-performance gradient insert.
- Author
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Scholten H, Wech T, Köhler S, Smart SS, Boyle JH, Teh I, Köstler H, and Schneider JE
- Subjects
- Animals, Mice, Algorithms, Reproducibility of Results, Magnetic Resonance Imaging, Phantoms, Imaging
- Abstract
This study aimed to examine different trajectory correction methods for spiral imaging on a preclinical scanner with high-performance gradients with respect to image quality in a phantom and in vivo. The gold standard method of measuring the trajectories in a separate experiment is compared to an isotropic delay-correction, a correction using the gradient system transfer function (GSTF), and a combination of the two. Three different spiral trajectories, with 96, 16, and three interleaves, are considered. The best image quality is consistently achieved when determining the trajectory in a separate phantom measurement. However, especially for the spiral with 96 interleaves, the other correction methods lead to almost comparable results. Remaining imperfections in the corrected gradient waveforms and trajectories are attributed to asymmetrically occurring undulations in the actual, generated gradients, suggesting that the underlying assumption of linearity is violated. In conclusion, images of sufficient quality can be acquired on preclinical small-animal scanners using spiral k-space trajectories without the need to carry out separate trajectory measurements each time. Depending on the trajectory, a simple isotropic delay-correction or a GSTF-based correction can provide images of similar quality., (© 2024 The Author(s). NMR in Biomedicine published by John Wiley & Sons Ltd.)
- Published
- 2024
- Full Text
- View/download PDF
35. Optimisation of cone beam CT radiotherapy imaging protocols using a novel 3D printed head and neck anthropomorphic phantom.
- Author
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Alzahrani M, O'Hara C, Bird D, Baldwin JPC, Naisbit M, Teh I, Broadbent DA, Al-Qaisieh B, Johnstone E, and Speight R
- Subjects
- Humans, Head and Neck Neoplasms radiotherapy, Head and Neck Neoplasms diagnostic imaging, Radiotherapy, Image-Guided instrumentation, Radiotherapy, Image-Guided methods, Neck diagnostic imaging, Cone-Beam Computed Tomography instrumentation, Phantoms, Imaging, Printing, Three-Dimensional, Head diagnostic imaging
- Abstract
Objective. This study aimed to optimise Cone Beam Computed Tomography (CBCT) protocols for head and neck (H&N) radiotherapy treatments using a 3D printed anthropomorphic phantom. It focused on precise patient positioning in conventional treatment and adaptive radiotherapy (ART). Approach. Ten CBCT protocols were evaluated with the 3D-printed H&N anthropomorphic phantom, including one baseline protocol currently used at our centre and nine new protocols. Adjustments were made to milliamperage and exposure time to explore their impact on radiation dose and image quality. Additionally, the effect on image quality of varying the scatter correction parameter for each of the protocols was assessed. Each protocol was compared against a reference CT scan. Usability was assessed by three Clinical Scientists using a Likert scale, and statistical validation was performed on the findings. Main results . The work revealed variability in the effectiveness of protocols. Protocols optimised for lower radiation exposure maintained sufficient image quality for patient setup in a conventional radiotherapy pathway, suggesting the potential for reducing patient radiation dose by over 50% without compromising efficacy. Optimising ART protocols involves balancing accuracy across brain, bone, and soft tissue, as no single protocol or scatter correction parameter achieves optimal results for all simultaneously. Significance. This study underscores the importance of optimising CBCT protocols in H&N radiotherapy. Our findings highlight the potential to maintain the usability of CBCT for bony registration in patient setup while significantly reducing the radiation dose, emphasizing the significance of optimising imaging protocols for the task in hand (registering to soft tissue or bone) and aligning with the as low as reasonably achievable principle. More studies are needed to assess these protocols for ART, including CBCT dose measurements and CT comparisons. Furthermore, the novel 3D printed anthropomorphic phantom demonstrated to be a useful tool when optimising CBCT protocols., (Creative Commons Attribution license.)
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- 2024
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36. Assessing suitability and stability of materials for a head and neck anthropomorphic multimodality (MRI/CT) phantoms for radiotherapy.
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Alzahrani M, Broadbent DA, Teh I, Al-Qaisieh B, and Speight R
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- Humans, Multimodal Imaging, Neck diagnostic imaging, Materials Testing, Head and Neck Neoplasms radiotherapy, Head and Neck Neoplasms diagnostic imaging, Phantoms, Imaging, Magnetic Resonance Imaging instrumentation, Tomography, X-Ray Computed, Head diagnostic imaging, Head radiation effects
- Abstract
Objective: This study aims to identify and evaluate suitable and stable materials for developing a head and neck anthropomorphic multimodality phantom for radiotherapy purposes. These materials must mimic human head and neck tissues in both computed tomography (CT) and magnetic resonance imaging (MRI) and maintain stable imaging properties over time and after radiation exposure, including the high levels associated with linear accelerator (linac) use. Approach: Various materials were assessed by measuring their CT numbers and T1 and T2 relaxation times. These measurements were compared to literature values to determine how closely the properties of the candidate materials resemble those of human tissues in the head and neck region. The stability of these properties was evaluated monthly over a year and after radiation exposure to doses up to 1000 Gy. Statistical analyzes were conducted to identify any significant changes over time and after radiation exposure. Main results: 10% and 12.6% Polyvinyl alcohol cryogel (PVA-c) both exhibited T1 and T2 relaxation times and CT numbers within the range appropriate for brain grey matter. 14.3% PVA-c and some plastic-based materials matched the MRI properties of brain white matter, with CT numbers close to the clinical range. Additionally, some plastic-based materials showed T1 and T2 relaxation times consistent with MRI properties of fat, although their CT numbers were not suitable. Over time and after irradiation, 10% PVA-c maintained consistent properties for brain grey matter. 12.6% PVA-c's T1 relaxation time decreased beyond the range after the first month. Significance: This study identified 10% PVA-c as a substitute for brain grey matter, demonstrating stable imaging properties over a year and after radiation exposure up to 1000 Gy. However, the results highlight a need for further research to find additional materials to accurately simulate a wider range of human tissues., (Creative Commons Attribution license.)
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- 2024
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37. Cardiac diffusion-weighted and tensor imaging: a Society for Cardiovascular Magnetic Resonance (SCMR) special interest group consensus statement.
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Dall'Armellina E, Ennis DB, Axel L, Croisille P, Ferreira PF, Gotschy A, Lohr D, Moulin K, Nguyen C, Nielles-Vallespin S, Romero W, Scott AD, Stoeck C, Teh I, Tunnicliffe L, Viallon M, Wang 5th, Young AA, Schneider JE, and Sosnovik DE
- Abstract
Thanks to recent developments in Cardiovascular magnetic resonance (CMR), cardiac diffusion-weighted magnetic resonance is fast emerging in a range of clinical applications. Cardiac diffusion-weighted imaging (cDWI) and diffusion tensor imaging (cDTI) now enable investigators and clinicians to assess and quantify the 3D microstructure of the heart. Free-contrast DWI is uniquely sensitized to the presence and displacement of water molecules within the myocardial tissue, including the intra-cellular, extra-cellular and intra-vascular spaces. CMR can determine changes in microstructure by quantifying: a) mean diffusivity (MD) -measuring the magnitude of diffusion; b) fractional anisotropy (FA) - specifying the directionality of diffusion; c) helix angle (HA) and transverse angle (TA) -indicating the orientation of the cardiomyocytes; d) E2A and E2A mobility - measuring the alignment and systolic-diastolic mobility of the sheetlets, respectively. This document provides recommendations for both clinical and research cDWI and cDTI, based on published evidence when available and expert consensus when not. It introduces the cardiac microstructure focusing on the cardiomyocytes and their role in cardiac physiology and pathophysiology. It highlights methods, observations and recommendations in terminology, acquisition schemes, post-processing pipelines, data analysis and interpretation of the different biomarkers. Despite the ongoing challenges discussed in the document and the need for ongoing technical improvements, it is clear that cDTI is indeed feasible, can be accurately and reproducibly performed and, most importantly, can provide unique insights into myocardial pathophysiology., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Erica Dall’Armellina reports administrative support and article publishing charges were provided by Society for Cardiovascular Magnetic Resonance. Andrew Scott reports a relationship with Siemens Healthcare that includes: funding grants. Lohr David reports a relationship with Siemens Healthineers AG that includes: funding grants. Sosnovik David reports a relationship with National Institutes of Health that includes: funding grants. Dan Ennis reports a relationship with Siemens Healthineers AG that includes: funding grants. Dan Ennis reports a relationship with GE Healthcare that includes: funding grants. Pierre CROISILLE reports a relationship with Siemens Healthineers AG that includes: funding grants. Magalie Viallon reports a relationship with Siemens Healthineers AG that includes: funding grants. Sonja Nielles-Vallespin reports a relationship with Siemens that includes: funding grants and non-financial support. co-author spouse works for an MRI vendor - SNV co-author editorial capacity for JCMR- DS associate editor co-author editorial board for JCMR- DE corresponding author: editorial board for JCMR- EDA If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.)
- Published
- 2024
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38. Diagnostic Accuracy of MRI for Detecting Nerve Injury in Brachial Plexus Birth Injury.
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Brooks J, Hardie C, Wade R, Teh I, and Bourke G
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Objectives: To determine the diagnostic accuracy of MRI for diagnosing nerve injury in brachial plexus birth injury (BPBI)., Methods: Electronic databases were searched from inception to 15th February 2023 for studies reporting the accuracy of MRI (index test) compared to surgical exploration (reference standard) in detecting the target conditions of: root avulsion; any nerve abnormality; and pseudomeningocele (as a marker of root avulsion) in children with BPBI. Meta-analysis using a bivariate model was performed where data allowed., Results: 8 studies met the inclusion criteria. In total, 116 children with BPBI were included. All included studies were at risk of bias. The mean sensitivity and mean specificity of MRI for detecting root avulsion was 68% (95% CI: 55%, 79%) and 89% (95% CI: 78%, 95%) respectively. Pseudomeningocele was not a reliable marker of avulsion. Data was too sparse to determine the diagnostic accuracy of MRI for any nerve abnormality., Conclusions: At present, surgical exploration should remain as the diagnostic modality of choice for BPBI due to the modest diagnostic accuracy of MRI in detecting root avulsion. The diagnostic accuracy of MRI needs to be close to 100% as the results may determine whether a child undergoes invasive surgery., Advances in Knowledge: Previous research regarding MRI in detecting BPBI is highly variable and prior to our study the overall diagnostic accuracy was unclear. Through conducting a systematic review and meta-analysis, we were able to reliably determine the overall sensitivity and specificity of MRI for detecting root avulsion., (© The Author(s) 2024. Published by Oxford University Press on behalf of the British Institute of Radiology.)
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- 2024
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39. Cardiac diffusion tensor imaging approaching cellular length scales reveals striking microstructural detail.
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Teh I, Dall'Armellina E, and Schneider JE
- Abstract
Competing Interests: Conflict of interest: None declared.
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- 2024
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40. Real-world implications of IMACS malignancy screening guidelines for idiopathic inflammatory myopathies: An evaluation of compliance and economic impact at a tertiary referral center.
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Teh I, Huang V, Oon S, and Day J
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- Humans, Female, Retrospective Studies, Middle Aged, Male, Aged, Risk Factors, Predictive Value of Tests, Cost-Benefit Analysis, Neoplasms economics, Neoplasms diagnosis, Neoplasms epidemiology, Risk Assessment, Practice Patterns, Physicians' economics, Practice Patterns, Physicians' standards, Health Care Costs, Tertiary Care Centers economics, Guideline Adherence economics, Myositis economics, Myositis diagnosis, Practice Guidelines as Topic, Early Detection of Cancer economics
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Aim: An inaugural set of consensus guidelines for malignancy screening in idiopathic inflammatory myopathy (IIM) were recently published by an international working group. These guidelines propose different investigation strategies based on "high", "intermediate" or "standard" malignancy risk groups. This study compares current malignancy screening practices at an Australian tertiary referral center with the recommendations outlined in these guidelines., Methods: We conducted a retrospective analysis of newly diagnosed IIM patients. Relevant demographic and clinical data regarding malignancy screening were recorded. Existing practice was compared with the guidelines using descriptive statistics; costs were calculated using the Australian Medicare Benefit Schedule., Results: Of the 47 patients identified (66% female, median age: 63 years [IQR: 55.5-70], median disease duration: 4 years [IQR: 3-6]), only one had a screening-detected malignancy. Twenty patients (43%) were at high risk, while 20 (43%) were at intermediate risk; the remaining seven (15%) had IBM, for which the proposed guidelines do not recommend screening. Only three (6%) patients underwent screening fully compatible with International Myositis Assessment and Clinical Studies recommendations. The majority (N = 39, 83%) were under-screened; the remaining five (11%) overscreened patients had IBM. The main reason for guideline non-compliance was the lack of repeated annual screening in the 3 years post-diagnosis for high-risk individuals (0% compliance). The mean cost of screening was substantially lower than those projected by following the guidelines ($481.52 [SD 423.53] vs $1341 [SD 935.67] per patient), with the highest disparity observed in high-risk female patients ($2314.29/patient)., Conclusion: Implementation of the proposed guidelines will significantly impact clinical practice and result in a potentially substantial additional economic burden., (© 2024 The Authors. International Journal of Rheumatic Diseases published by Asia Pacific League of Associations for Rheumatology and John Wiley & Sons Australia, Ltd.)
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- 2024
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41. Comparison of distortion correction preprocessing pipelines for DTI in the upper limb.
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Wade RG, Tam W, Perumal A, Pepple S, Griffiths TT, Flather R, Haroon HA, Shelley D, Plein S, Bourke G, and Teh I
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- Humans, Peripheral Nerves, Upper Extremity diagnostic imaging, Echo-Planar Imaging, Image Processing, Computer-Assisted methods, Diffusion Tensor Imaging methods, Diffusion Magnetic Resonance Imaging methods
- Abstract
Purpose: DTI characterizes tissue microstructure and provides proxy measures of nerve health. Echo-planar imaging is a popular method of acquiring DTI but is susceptible to various artifacts (e.g., susceptibility, motion, and eddy currents), which may be ameliorated via preprocessing. There are many pipelines available but limited data comparing their performance, which provides the rationale for this study., Methods: DTI was acquired from the upper limb of heathy volunteers at 3T in blip-up and blip-down directions. Data were independently corrected using (i) FSL's TOPUP & eddy, (ii) FSL's TOPUP, (iii) DSI Studio, and (iv) TORTOISE. DTI metrics were extracted from the median, radial, and ulnar nerves and compared (between pipelines) using mixed-effects linear regression. The geometric similarity of corrected b = 0 images and the slice matched T1-weighted (T1w) images were computed using the Sörenson-Dice coefficient., Results: Without preprocessing, the similarity coefficient of the blip-up and blip-down datasets to the T1w was 0·80 and 0·79, respectively. Preprocessing improved the geometric similarity by 1% with no difference between pipelines. Compared to TOPUP & eddy, DSI Studio and TORTOISE generated 2% and 6% lower estimates of fractional anisotropy, and 6% and 13% higher estimates of radial diffusivity, respectively. Estimates of anisotropy from TOPUP & eddy versus TOPUP were not different but TOPUP reduced radial diffusivity by 3%. The agreement of DTI metrics between pipelines was poor., Conclusions: Preprocessing DTI from the upper limb improves geometric similarity but the choice of the pipeline introduces clinically important variability in diffusion parameter estimates from peripheral nerves., (© 2023 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals LLC on behalf of International Society for Magnetic Resonance in Medicine.)
- Published
- 2024
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42. In Vivo Cardiac Diffusion Imaging Without Motion-Compensation Leads to Unreasonably High Diffusivity.
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Moulin K, Stoeck CT, Axel L, Broncano J, Croisille P, Dall'Armellina E, Ennis DB, Ferreira PF, Gotschy A, Miro S, Schneider JE, Scott AD, Sosnovik DE, Teh I, Tous C, Tunnicliffe EM, Viallon M, and Nguyen C
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- Humans, Motion, Heart diagnostic imaging, Diffusion Magnetic Resonance Imaging methods
- Published
- 2023
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43. Measuring cardiomyocyte cellular characteristics in cardiac hypertrophy using diffusion-weighted MRI.
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Farzi M, Coveney S, Afzali M, Zdora MC, Lygate CA, Rau C, Frangi AF, Dall'Armellina E, Teh I, and Schneider JE
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- Mice, Animals, Diffusion Magnetic Resonance Imaging methods, Cardiomegaly diagnostic imaging, Imaging, Three-Dimensional, Myocytes, Cardiac, Aortic Valve Stenosis
- Abstract
Purpose: This paper presents a hierarchical modeling approach for estimating cardiomyocyte major and minor diameters and intracellular volume fraction (ICV) using diffusion-weighted MRI (DWI) data in ex vivo mouse hearts., Methods: DWI data were acquired on two healthy controls and two hearts 3 weeks post transverse aortic constriction (TAC) using a bespoke diffusion scheme with multiple diffusion times ( Δ $$ \Delta $$ ), q-shells and diffusion encoding directions. Firstly, a bi-exponential tensor model was fitted separately at each diffusion time to disentangle the dependence on diffusion times from diffusion weightings, that is, b-values. The slow-diffusing component was attributed to the restricted diffusion inside cardiomyocytes. ICV was then extrapolated at Δ = 0 $$ \Delta =0 $$ using linear regression. Secondly, given the secondary and the tertiary diffusion eigenvalue measurements for the slow-diffusing component obtained at different diffusion times, major and minor diameters were estimated assuming a cylinder model with an elliptical cross-section (ECS). High-resolution three-dimensional synchrotron X-ray imaging (SRI) data from the same specimen was utilized to evaluate the biophysical parameters., Results: Estimated parameters using DWI data were (control 1/control 2 vs. TAC 1/TAC 2): major diameter-17.4 μ $$ \mu $$ m/18.0 μ $$ \mu $$ m versus 19.2 μ $$ \mu $$ m/19.0 μ $$ \mu $$ m; minor diameter-10.2 μ $$ \mu $$ m/9.4 μ $$ \mu $$ m versus 12.8 μ $$ \mu $$ m/13.4 μ $$ \mu $$ m; and ICV-62%/62% versus 68%/47%. These findings were consistent with SRI measurements., Conclusion: The proposed method allowed for accurate estimation of biophysical parameters suggesting cardiomyocyte diameters as sensitive biomarkers of hypertrophy in the heart., (© 2023 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals LLC on behalf of International Society for Magnetic Resonance in Medicine.)
- Published
- 2023
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44. Microstructural and Microvascular Phenotype of Sarcomere Mutation Carriers and Overt Hypertrophic Cardiomyopathy.
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Joy G, Kelly CI, Webber M, Pierce I, Teh I, McGrath L, Velazquez P, Hughes RK, Kotwal H, Das A, Chan F, Bakalakos A, Lorenzini M, Savvatis K, Mohiddin SA, Macfarlane PW, Orini M, Manisty C, Kellman P, Davies RH, Lambiase PD, Nguyen C, Schneider JE, Tome M, Captur G, Dall'Armellina E, Moon JC, and Lopes LR
- Subjects
- Humans, Sarcomeres genetics, Diffusion Tensor Imaging, Genetic Predisposition to Disease, Mutation, Phenotype, Biomarkers, Fibrosis, Hypertrophy, Left Ventricular, Cardiomyopathy, Hypertrophic diagnosis
- Abstract
Background: In hypertrophic cardiomyopathy (HCM), myocyte disarray and microvascular disease (MVD) have been implicated in adverse events, and recent evidence suggests that these may occur early. As novel therapy provides promise for disease modification, detection of phenotype development is an emerging priority. To evaluate their utility as early and disease-specific biomarkers, we measured myocardial microstructure and MVD in 3 HCM groups-overt, either genotype-positive (G+LVH+) or genotype-negative (G-LVH+), and subclinical (G+LVH-) HCM-exploring relationships with electrical changes and genetic substrate., Methods: This was a multicenter collaboration to study 206 subjects: 101 patients with overt HCM (51 G+LVH+ and 50 G-LVH+), 77 patients with G+LVH-, and 28 matched healthy volunteers. All underwent 12-lead ECG, quantitative perfusion cardiac magnetic resonance imaging (measuring myocardial blood flow, myocardial perfusion reserve, and perfusion defects), and cardiac diffusion tensor imaging measuring fractional anisotropy (lower values expected with more disarray), mean diffusivity (reflecting myocyte packing/interstitial expansion), and second eigenvector angle (measuring sheetlet orientation)., Results: Compared with healthy volunteers, patients with overt HCM had evidence of altered microstructure (lower fractional anisotropy, higher mean diffusivity, and higher second eigenvector angle; all P <0.001) and MVD (lower stress myocardial blood flow and myocardial perfusion reserve; both P <0.001). Patients with G-LVH+ were similar to those with G+LVH+ but had elevated second eigenvector angle ( P <0.001 after adjustment for left ventricular hypertrophy and fibrosis). In overt disease, perfusion defects were found in all G+ but not all G- patients (100% [51/51] versus 82% [41/50]; P =0.001). Patients with G+LVH- compared with healthy volunteers similarly had altered microstructure, although to a lesser extent (all diffusion tensor imaging parameters; P <0.001), and MVD (reduced stress myocardial blood flow [ P =0.015] with perfusion defects in 28% versus 0 healthy volunteers [ P =0.002]). Disarray and MVD were independently associated with pathological electrocardiographic abnormalities in both overt and subclinical disease after adjustment for fibrosis and left ventricular hypertrophy (overt: fractional anisotropy: odds ratio for an abnormal ECG, 3.3, P =0.01; stress myocardial blood flow: odds ratio, 2.8, P =0.015; subclinical: fractional anisotropy odds ratio, 4.0, P =0.001; myocardial perfusion reserve odds ratio, 2.2, P =0.049)., Conclusions: Microstructural alteration and MVD occur in overt HCM and are different in G+ and G- patients. Both also occur in the absence of hypertrophy in sarcomeric mutation carriers, in whom changes are associated with electrocardiographic abnormalities. Measurable changes in myocardial microstructure and microvascular function are early-phenotype biomarkers in the emerging era of disease-modifying therapy., Competing Interests: Disclosures None.
- Published
- 2023
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45. Cardiac q-space trajectory imaging by motion-compensated tensor-valued diffusion encoding in human heart in vivo.
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Teh I, Shelley D, Boyle JH, Zhou F, Poenar AM, Sharrack N, Foster RJ, Yuldasheva NY, Parker GJM, Dall'Armellina E, Plein S, Schneider JE, and Szczepankiewicz F
- Subjects
- Humans, Diffusion Magnetic Resonance Imaging, Myocardium, Heart Ventricles, Anisotropy, Diffusion Tensor Imaging methods, Heart diagnostic imaging
- Abstract
Purpose: Tensor-valued diffusion encoding can probe more specific features of tissue microstructure than what is available by conventional diffusion weighting. In this work, we investigate the technical feasibility of tensor-valued diffusion encoding at high b-values with q-space trajectory imaging (QTI) analysis, in the human heart in vivo., Methods: Ten healthy volunteers were scanned on a 3T scanner. We designed time-optimal gradient waveforms for tensor-valued diffusion encoding (linear and planar) with second-order motion compensation. Data were analyzed with QTI. Normal values and repeatability were investigated for the mean diffusivity (MD), fractional anisotropy (FA), microscopic FA (μFA), isotropic, anisotropic and total mean kurtosis (MKi, MKa, and MKt), and orientation coherence (C
c ). A phantom, consisting of two fiber blocks at adjustable angles, was used to evaluate sensitivity of parameters to orientation dispersion and diffusion time., Results: QTI data in the left ventricular myocardium were MD = 1.62 ± 0.07 μm2 /ms, FA = 0.31 ± 0.03, μFA = 0.43 ± 0.07, MKa = 0.20 ± 0.07, MKi = 0.13 ± 0.03, MKt = 0.33 ± 0.09, and Cc = 0.56 ± 0.22 (mean ± SD across subjects). Phantom experiments showed that FA depends on orientation dispersion, whereas μFA was insensitive to this effect., Conclusion: We demonstrated the first tensor-valued diffusion encoding and QTI analysis in the heart in vivo, along with first measurements of myocardial μFA, MKi, MKa, and Cc . The methodology is technically feasible and provides promising novel biomarkers for myocardial tissue characterization., (© 2023 The Authors. Magnetic Resonance in Medicine published by Wiley Periodicals LLC on behalf of International Society for Magnetic Resonance in Medicine.)- Published
- 2023
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46. Meta-analysis of the normal diffusion tensor imaging values of the peripheral nerves in the upper limb.
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Wade RG, Lu F, Poruslrani Y, Karia C, Feltbower RG, Plein S, Bourke G, and Teh I
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- Adult, Male, Female, Humans, Reference Values, Ulnar Nerve, Forearm innervation, Anisotropy, Diffusion Tensor Imaging methods, Peripheral Nerves diagnostic imaging
- Abstract
Peripheral neuropathy affects 1 in 10 adults over the age of 40 years. Given the absence of a reliable diagnostic test for peripheral neuropathy, there has been a surge of research into diffusion tensor imaging (DTI) because it characterises nerve microstructure and provides reproducible proxy measures of myelination, axon diameter, fibre density and organisation. Before researchers and clinicians can reliably use diffusion tensor imaging to assess the 'health' of the major nerves of the upper limb, we must understand the "normal" range of values and how they vary with experimental conditions. We searched PubMed, Embase, medRxiv and bioRxiv for studies which reported the findings of DTI of the upper limb in healthy adults. Four review authors independently triple extracted data. Using the meta suite of Stata 17, we estimated the normal fractional anisotropy (FA) and diffusivity (mean, MD; radial, RD; axial AD) values of the median, radial and ulnar nerve in the arm, elbow and forearm. Using meta-regression, we explored how DTI metrics varied with age and experimental conditions. We included 20 studies reporting data from 391 limbs, belonging to 346 adults (189 males and 154 females, ~ 1.2 M:1F) of mean age 34 years (median 31, range 20-80). In the arm, there was no difference in the FA (pooled mean 0.59 mm
2 /s [95% CI 0.57, 0.62]; I2 98%) or MD (pooled mean 1.13 × 10-3 mm2 /s [95% CI 1.08, 1.18]; I2 99%) of the median, radial and ulnar nerves. Around the elbow, the ulnar nerve had a 12% lower FA than the median and radial nerves (95% CI - 0.25, 0.00) and significantly higher MD, RD and AD. In the forearm, the FA (pooled mean 0.55 [95% CI 0.59, 0.64]; I2 96%) and MD (pooled mean 1.03 × 10-3 mm2 /s [95% CI 0.94, 1.12]; I2 99%) of the three nerves were similar. Multivariable meta regression showed that the b-value, TE, TR, spatial resolution and age of the subject were clinically important moderators of DTI parameters in peripheral nerves. We show that subject age, as well as the b-value, TE, TR and spatial resolution are important moderators of DTI metrics from healthy nerves in the adult upper limb. The normal ranges shown here may inform future clinical and research studies., (© 2023. The Author(s).)- Published
- 2023
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47. Three-dimensional micro-structurally informed in silico myocardium-Towards virtual imaging trials in cardiac diffusion weighted MRI.
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Lashgari M, Ravikumar N, Teh I, Li JR, Buckley DL, Schneider JE, and Frangi AF
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- Humans, Diffusion Magnetic Resonance Imaging methods, Imaging, Three-Dimensional methods, Myocytes, Cardiac, Body Water, Diffusion Tensor Imaging methods, Myocardium pathology
- Abstract
In silico tissue models (viz. numerical phantoms) provide a mechanism for evaluating quantitative models of magnetic resonance imaging. This includes the validation and sensitivity analysis of imaging biomarkers and tissue microstructure parameters. This study proposes a novel method to generate a realistic numerical phantom of myocardial microstructure. The proposed method extends previous studies by accounting for the variability of the cardiomyocyte shape, water exchange between the cardiomyocytes (intercalated discs), disorder class of myocardial microstructure, and four sheetlet orientations. In the first stage of the method, cardiomyocytes and sheetlets are generated by considering the shape variability and intercalated discs in cardiomyocyte-cardiomyocyte connections. Sheetlets are then aggregated and oriented in the directions of interest. The morphometric study demonstrates no significant difference (p>0.01) between the distribution of volume, length, and primary and secondary axes of the numerical and real (literature) cardiomyocyte data. Moreover, structural correlation analysis validates that the in-silico tissue is in the same class of disorderliness as the real tissue. Additionally, the absolute angle differences between the simulated helical angle (HA) and input HA (reference value) of the cardiomyocytes (4.3°±3.1°) demonstrate a good agreement with the absolute angle difference between the measured HA using experimental cardiac diffusion tensor imaging (cDTI) and histology (reference value) reported by (Holmes et al., 2000) (3.7°±6.4°) and (Scollan et al. 1998) (4.9°±14.6°). Furthermore, the angular distance between eigenvectors and sheetlet angles of the input and simulated cDTI is much smaller than those between measured angles using structural tensor imaging (as a gold standard) and experimental cDTI. Combined with the qualitative results, these results confirm that the proposed method can generate richer numerical phantoms for the myocardium than previous studies., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 The Author(s). Published by Elsevier B.V. All rights reserved.)
- Published
- 2022
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48. Detection of Intramyocardial Iron in Patients Following ST-Elevation Myocardial Infarction Using Cardiac Diffusion Tensor Imaging.
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Das A, Kelly C, Teh I, Sharrack N, Stoeck CT, Kozerke S, Schneider JE, Plein S, and Dall'Armellina E
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- Diffusion Tensor Imaging, Female, Hemorrhage pathology, Humans, Iron, Magnetic Resonance Imaging, Cine methods, Male, Myocardium pathology, Prospective Studies, ST Elevation Myocardial Infarction diagnostic imaging, ST Elevation Myocardial Infarction pathology
- Abstract
Background: Intramyocardial hemorrhage (IMH) following ST-elevation myocardial infarction (STEMI) is associated with poor prognosis. In cardiac magnetic resonance (MR), T2* mapping is the reference standard for detecting IMH while cardiac diffusion tensor imaging (cDTI) can characterize myocardial architecture via fractional anisotropy (FA) and mean diffusivity (MD) of water molecules. The value of cDTI in the detection of IMH is not currently known., Hypothesis: cDTI can detect IMH post-STEMI., Study Type: Prospective., Subjects: A total of 50 patients (20% female) scanned at 1-week (V1) and 3-month (V2) post-STEMI., Field Strength/sequence: A 3.0 T; inversion-recovery T1-weighted-imaging, multigradient-echo T2* mapping, spin-echo cDTI., Assessment: T2* maps were analyzed to detect IMH (defined as areas with T2* < 20 msec within areas of infarction). cDTI images were co-registered to produce averaged diffusion-weighted-images (DWIs), MD, and FA maps; hypointense areas were manually planimetered for IMH quantification., Statistics: On averaged DWI, the presence of hypointense signal in areas matching IMH on T2* maps constituted to true-positive detection of iron. Independent samples t-tests were used to compare regional cDTI values. Results were considered statistically significant at P ≤ 0.05., Results: At V1, 24 patients had IMH on T2*. On averaged DWI, all 24 patients had hypointense signal in matching areas. IMH size derived using averaged-DWI was nonsignificantly greater than from T2* (2.0 ± 1.0 cm
2 vs 1.89 ± 0.96 cm2 , P = 0.69). Compared to surrounding infarcted myocardium, MD was significantly reduced (1.29 ± 0.20 × 10-3 mm2 /sec vs 1.75 ± 0.16 × 10-3 mm2 /sec) and FA was significantly increased (0.40 ± 0.07 vs 0.23 ± 0.03) within areas of IMH. By V2, all 24 patients with acute IMH continued to have hypointense signals on averaged-DWI in the affected area. T2* detected IMH in 96% of these patients. Overall, averaged-DWI had 100% sensitivity and 96% specificity for the detection of IMH., Data Conclusion: This study demonstrates that the parameters MD and FA are susceptible to the paramagnetic properties of iron, enabling cDTI to detect IMH., Evidence Level: 1 TECHNICAL EFFICACY: Stage 2., (© 2022 The Authors. Journal of Magnetic Resonance Imaging published by Wiley Periodicals LLC on behalf of International Society for Magnetic Resonance in Medicine.)- Published
- 2022
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49. Diagnostic accuracy of magnetic resonance imaging for nerve injury in obstetric brachial plexus injury: protocol for systematic review and meta-analysis.
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Hardie C, Brooks J, Wade R, Teh I, and Bourke G
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- Child, Preschool, Humans, Magnetic Resonance Imaging methods, Meta-Analysis as Topic, Sensitivity and Specificity, Systematic Reviews as Topic, Brachial Plexus diagnostic imaging, Brachial Plexus injuries
- Abstract
Background: Early and accurate clinical diagnosis of the extent of obstetric brachial plexus injury (OBPI) is challenging. The current gold standard for delineating the nerve injury is surgical exploration, and synchronous reconstruction is performed if indicated. Magnetic resonance imaging (MRI) is a non-invasive method of assessing the anatomy and severity of nerve injury in OBPI but the diagnostic accuracy is unclear. The primary objective of this review is to determine the diagnostic accuracy of MRI in comparison to surgical brachial plexus exploration for detecting root avulsion in children under 5 with OBPI. The secondary objectives are to determine its' diagnostic accuracy for detecting nerve abnormality and detecting pseudomeningocele(s) in this group., Methods: This review will be conducted according to the Preferred Reporting Items for Systematic Reviews and Meta-Analysis (PRISMA).We will include studies reporting the accuracy of MRI (index test) compared to surgical exploration (reference standard) in detecting any of the three target conditions (root avulsion, any nerve abnormality and pseudomeningocele) in children under five with OBPI. Case reports and studies where the number of true positives, false positives, true negatives and false negatives cannot be derived will be excluded. We plan to search PubMed, Embase and CENTRAL for relevant studies from database inception to 15 June 2022. We will also search grey literature (medRxiv, bioRxiv and Google Scholar) and perform forward and backward citation chasing. Screening and full-text assessment of eligibility will be conducted by two independent reviewers, who will then both extract the relevant data. The QUADAS-2 tool will be used to assess methodological quality and risk of bias of included studies by two reviewers independently. The following test characteristics for the target conditions will be extracted: true positives, false positives, true negatives and false negatives. Estimates of sensitivity and specificity with 95% confidence intervals will be shown in forest plots for each study. If appropriate, summary sensitivities and specificities for target conditions will be obtained via meta-analyses using a bivariate model., Discussion: This study will aim to clarify the diagnostic accuracy of MRI for detecting nerve injury in OBPI and define its clinical role., Systematic Review Registration: PROSPERO CRD42021267629., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
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50. Exploratory Analysis of Serial 18 F-fluciclovine PET-CT and Multiparametric MRI during Chemoradiation for Glioblastoma.
- Author
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Fatania K, Frood R, Tyyger M, McDermott G, Fernandez S, Shaw GC, Boissinot M, Salvatore D, Ottobrini L, Teh I, Wright J, Bailey MA, Koch-Paszkowski J, Schneider JE, Buckley DL, Murray L, Scarsbrook A, Short SC, and Currie S
- Abstract
Anti-1-amino-3-
18 fluorine-fluorocyclobutane-1-carboxylic acid (18 F-fluciclovine) positron emission tomography (PET) shows preferential glioma uptake but there is little data on how uptake correlates with post-contrast T1-weighted (Gd-T1) and dynamic contrast-enhanced magnetic resonance imaging (DCE-MRI) activity during adjuvant treatment. This pilot study aimed to compare18 F-fluciclovine PET, DCE-MRI and Gd-T1 in patients undergoing chemoradiotherapy for glioblastoma (GBM), and in a parallel pre-clinical GBM model, to investigate correlation between18 F-fluciclovine uptake, MRI findings, and tumour biology.18 F-fluciclovine-PET-computed tomography (PET-CT) and MRI including DCE-MRI were acquired before, during and after adjuvant chemoradiotherapy (60 Gy in 30 fractions with temozolomide) in GBM patients. MRI volumes were manually contoured; PET volumes were defined using semi-automatic thresholding. The similarity of the PET and DCE-MRI volumes outside the Gd-T1 volume boundary was measured using the Dice similarity coefficient (DSC). CT-2A tumour-bearing mice underwent MRI and18 F-fluciclovine PET-CT. Post-mortem mice brains underwent immunohistochemistry staining for ASCT2 (amino acid transporter), nestin (stemness) and Ki-67 (proliferation) to assess for biologically active tumour. 6 patients were recruited (GBM 1-6) and grouped according to overall survival (OS)-short survival (GBM-SS, median OS 249 days) and long survival (GBM-LS, median 903 days). For GBM-SS, PET tumour volumes were greater than DCE-MRI, in turn greater than Gd-T1. For GBM-LS, Gd-T1 and DCE-MRI were greater than PET. Tumour-specific18 F-fluciclovine uptake on pre-clinical PET-CT corresponded to immunostaining for Ki-67, nestin and ASCT2. Results suggest volumes of18 F-fluciclovine-PET activity beyond that depicted by DCE-MRI and Gd-T1 are associated with poorer prognosis in patients undergoing chemoradiotherapy for GBM. The pre-clinical model confirmed18 F-fluciclovine uptake reflected biologically active tumour.- Published
- 2022
- Full Text
- View/download PDF
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