77 results on '"Silan C"'
Search Results
2. Possible association between germline methylenetetrahydrofolate reductase gene polymorphisms and psoriasis risk in a Turkish population
- Author
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Kilic, S., Ozdemir, O., Silan, F., Isik, S., Yildiz, O., Karaagacli, D., Silan, C., and Ogretmen, Z.
- Published
- 2017
- Full Text
- View/download PDF
3. Attenuation of partial unilateral ureteral obstruction-induced renal damage with hyperbaric oxygen therapy in a rat model
- Author
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Sancak, E.B., primary, Tan, Y.Z., additional, Turkon, H., additional, and Silan, C., additional
- Published
- 2017
- Full Text
- View/download PDF
4. Prenatal arsenic exposure, arsenic metabolism and neurocognitive development of 2-year-old children in low-arsenic areas
- Author
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Huan Chen, Hongling Zhang, Xin Wang, Yi Wu, Yiqiong Zhang, Silan Chen, Wenxin Zhang, Xiaojie Sun, Tongzhang Zheng, Wei Xia, Shunqing Xu, and Yuanyuan Li
- Subjects
Prenatal exposure ,Arsenic species ,Arsenic metabolism ,Neurocognitive development ,Critical window ,Environmental sciences ,GE1-350 - Abstract
Background: There is limited evidence on the effects of arsenic species and metabolic capacity on child neurodevelopment, particularly at low levels. Further, little is known about the critical window of exposure. Objective: To estimate the associations of arsenic exposure and arsenic metabolism in different pregnancy periods with neurodevelopment of two-year-old children. Methods: Concentrations of arsenobetaine (AsB), arsenite, arsenate, monomethyl arsenic acid (MMA), and dimethyl arsenic acid (DMA) in urine samples collected in three trimesters from 1006 mothers were measured using HPLC − ICPMS. Inorganic arsenic (iAs) was calculated as the sum of arsenite and arsenate. Total arsenic (tAs) was calculated as the sum of iAs, MMA and DMA. Child neurodevelopment was assessed with the Bayley Scales of Infant Development. Results: The geometric mean (GM) of SG-adjusted tAs in the first, second, third trimester was 16.37, 12.94, 13.04 μg/L, respectively. The mental development index (MDI) score was inversely associated with iAs and tAs. Compared to the 1st quartile, the MDI score decreased 0.43 (95%CI: −4.22, 3.36) for the 2nd, 6.50 (95%CI: −11.73, −1.27) for the 3rd, 5.42 (95%CI: −10.74, −0.10) for the 4th quartiles of iAs, and decreased 4.03 (95%CI: −7.90, −0.15) in the 4th quartile of tAs. In trimester-specific models, negative associations of DMA [−1.94 (95%CI: −3.18, −0.71)] and tAs [−1.61 (95%CI: −3.02, −0.20)] with the psychomotor development index (PDI) were only observed in 1st trimester. Conclusions: Our study found inverse associations between prenatal arsenic exposure, especially in early pregnancy, and neurodevelopment of children at two years old, even at low exposure levels.
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- 2023
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5. Possible association between germline methylenetetrahydrofolate reductase gene polymorphisms and psoriasis risk in a Turkish population
- Author
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Kilic, S., primary, Ozdemir, O., additional, Silan, F., additional, Isik, S., additional, Yildiz, O., additional, Karaagacli, D., additional, Silan, C., additional, and Ogretmen, Z., additional
- Published
- 2016
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6. 602 Syringic acid preconditioning improves kidney ischemia-reperfusion
- Author
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Sancak, E.B., primary, Akbas, A., additional, Silan, C., additional, Cakir, D.Ü., additional, and Sidika Seyma, O., additional
- Published
- 2016
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7. 38 - Attenuation of partial unilateral ureteral obstruction-induced renal damage with hyperbaric oxygen therapy in a rat model
- Author
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Sancak, E.B., Tan, Y.Z., Turkon, H., and Silan, C.
- Published
- 2017
- Full Text
- View/download PDF
8. The Naturally Evolved EPSPS From Goosegrass Confers High Glyphosate Resistance to Rice
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Chao Ouyang, Wei Liu, Silan Chen, Huimin Zhao, Xinyan Chen, Xiongxia Jin, Xinpeng Li, Yongzhong Wu, Xiang Zeng, Peijin Huang, Xiuying He, and Baoguang An
- Subjects
glyphosate ,EPSPS ,goosegrass ,rice ,plant transformation ,Plant culture ,SB1-1110 - Abstract
Glyphosate-resistant crops developed by the CP4-EPSPS gene from Agrobacterium have been planted on a massive scale globally, which benefits from the high efficiency and broad spectrum of glyphosate in weed control. Some glyphosate-resistant (GR) genes from microbes have been reported, which might raise biosafety concerns. Most of them were obtained through a hygromycin-HPT transformation system. Here we reported the plant source with 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS) gene from goosegrass endowed rice with high resistance to glyphosate. The integrations and inheritability of the transgenes in the rice genome were investigated within two generations. The EiEPSPS transgenic plants displayed similar growth and development to wild type under no glyphosate selection pressure but better reproductive performance under lower glyphosate selection pressure. Furthermore, we reconstructed a binary vector pCEiEPSPS and established the whole stage glyphosate selection using the vector. The Glyphosate-pCEiEPSPS selection system showed a significantly higher transformation efficiency compared with the hygromycin-HPT transformation system. Our results provided a promising alternative gene resource to the development of GR plants and also extended the plant transformation toolbox.
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- 2021
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9. Psychoactive Drug Related Traumatic Deaths in Istanbul between 1990-2000
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Toprak, S, primary, Sam, B, additional, Akgul, E, additional, Silan, C, additional, and Baysal, E, additional
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- 2010
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10. On the Mechanisms of Post-Rest Adaptation in the Isolated Electrically Driven Left Atria of Rats
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Küçukhüseyin,, C., primary, Öncel,, Η., additional, and Silan,, C., additional
- Published
- 2002
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11. Renovascular Actions of Adenosine in the Isolated Perfused Rat Kidney: Possible Underlying Mechanisms
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Küçükhüseyin, C., primary, Akbaş, Ν., additional, Silan, C., additional, Barlas, A., additional, Yillar, D.O., additional, and Seçin, I., additional
- Published
- 2001
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12. 4-Aminopyridine can Induce Release of Calcium from the Sarcoplasmic Reticulum of Frog Heart
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Özgül,, M., primary, Silan,, C., additional, Yillar,, O., additional, and Küçükhüseyin,, C., additional
- Published
- 2000
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13. Induction of Calcium-Dependent Action Potentials by 4-Aminopyridine in Potassium Depolarized Guinea-Pig Papillary Muscle
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Küçükhüseyin,, C., primary and Silan,, C., additional
- Published
- 1997
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14. ON THE MECHANISMS OF ADENOSINE INDUCED PULMONARY VASOCONSTRICTION IN RATS
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Küçükhüseyin, C., primary, Silan, C., additional, Akbaş, N., additional, Payat, M., additional, Öncel, H., additional, and Barlas, A., additional
- Published
- 1997
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15. Selective gene expression in failing human heart. Quantification of steady-state levels of messenger RNA in endomyocardial biopsies using the polymerase chain reaction.
- Author
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Feldman, A M, primary, Ray, P E, additional, Silan, C M, additional, Mercer, J A, additional, Minobe, W, additional, and Bristow, M R, additional
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- 1991
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16. A genetic linkage map of mouse chromosome 10: localization of eighteen molecular markers using a single interspecific backcross.
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Justice, M J, primary, Siracusa, L D, additional, Gilbert, D J, additional, Heisterkamp, N, additional, Groffen, J, additional, Chada, K, additional, Silan, C M, additional, Copeland, N G, additional, and Jenkins, N A, additional
- Published
- 1990
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17. Silencing of D-Lactate Dehydrogenase Impedes Glyoxalase System and Leads to Methylglyoxal Accumulation and Growth Inhibition in Rice
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Baoguang An, Jie Lan, Xiaolong Deng, Silan Chen, Chao Ouyang, Huiyun Shi, Jing Yang, and Yangsheng Li
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alternative splicing ,D-lactate dehydrogenase ,growth inhibition ,GSH ,methylglyoxal ,glyoxalase system ,Plant culture ,SB1-1110 - Abstract
D-Lactate is oxidized by two classes of D-lactate dehydrogenase (D-LDH), namely, NAD-dependent and NAD-independent D-LDHs. Little is known about the characteristics and biological functions of D-LDHs in rice. In this study, a functional NAD-independent D-LDH (LOC_Os07g06890) was identified in rice, as a result of alternative splicing events. Characterization of the expression profile, subcellular localization, and enzymatic properties of the functional OsD-LDH revealed that it is a mitochondrial cytochrome-c-dependent D-LDH with high affinity and catalytic efficiency. Functional analysis of OsD-LDH RNAi transgenic rice demonstrated that OsD-LDH participates in methylglyoxal metabolism by affecting the activity of the glyoxalase system and aldo-keto reductases. Under methylglyoxal treatment, silencing of OsD-LDH in rice resulted in the accumulation of methylglyoxal and D-lactate, the decrease of reduced glutathione in leaves, and ultimately severe growth inhibition. Moreover, the detached leaves of OsD-LDH RNAi plants were more sensitive to salt stress. However, the silencing of OsD-LDH did not affect the growth under photorespiration conditions. Our results provide new insights into the role of NAD-independent D-LDHs in rice.
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- 2017
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18. Regulatory sequences in the promoter of the Dictyostelium Actin 6 gene.
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Nellen, W., Silan, C., Saur, U., and Firtel, R.A.
- Abstract
The promoter region of the developmentally regulated Actin 6 gene of Dictyostelium has been dissected by a series of deletions. Functional analysis of the deletions in Dictyostelium transformants revealed two short regulatory sequences: a positive upstream element (PUE) between ‐599 and ‐572 which increases transcription by a factor of 10 but does not affect the developmental pattern of expression and an upstream activator sequence (UAS) between ‐249 and ‐215 which is essential for transcription and proper developmental regulation. The UAS partially coincides with a conserved sequence with dyad symmetry found upstream of several Dictyostelium actin genes (Romans and Firtel, 1985a).
- Published
- 1986
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19. DNA-mediated transformation in Dictyostelium discoideum: regulated expression of an actin gene fusion
- Author
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Nellen, W, Silan, C, and Firtel, R A
- Abstract
We have constructed a new vector for transformation that carries a fusion of the Dictyostelium discoideum actin 6 promoter gene and 5' flanking region with the bacterial Tn5 NeoR (KanR) gene which can confer resistance to the aminoglycoside G418. This vector can be used to transform D. discoideum cells. Approximately 200 to 2,000 transformants were obtained per 10(7) cells. Transformed cell populations carried vector DNA at an average copy number of ca. 5 per cell, and the DNA was stable for more than 40 generations in the absence of selection. We have shown that transformed cells synthesize functional kanamycin phosphotransferase and that initiation of transcription of the actin 6-NeoR gene fusion occurs at the actin 6 cap site. Moreover, analysis of RNA isolated from transformed and untransformed cells during vegetative growth and during development indicated that the actin 6-NeoR gene fusion was regulated in parallel with the endogenous actin 6 gene, suggesting that the upstream flanking regions of actin 6 contain the cis-acting regulatory sequences sufficient for differential regulation of this gene during D. discoideum development. These results indicate that this system can be used to examine control of gene expression during D. discoideum development.
- Published
- 1984
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20. Extrachromosomal replication of shuttle vectors in Dictyostelium discoideum
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Firtel, R A, Silan, C, Ward, T E, Howard, P, Metz, B A, Nellen, W, and Jacobson, A
- Abstract
We cloned a 12.3-kilobase (kb) endogenous plasmid, Ddp1, found in several wild-type and laboratory strains of Dictyostelium discoideum into pBR322. The cloned plasmids have been used to cotransform D. discoideum cells with B10S, a transformation vector carrying a gene fusion conferring resistance to G418. Whereas B10S DNA alone appears to integrate in a tandem array, the cloned Ddp1 plasmids replicate extrachromosomally and are stably maintained in the absence of selection with an average copy number of 50 to 100 copies per cell. The Ddp1-derived plasmids can be directly recovered by transforming Escherichia coli with bulk nuclear DNA from these cells. Preliminary deletion analysis indicates that not all regions of Ddp1 are necessary for stable replication in D. discoideum. Several recombinant vectors which replicate extrachromosomally in D. discoideum were also isolated. One contains the Act6-neor gene fusion from B10S recombined into one of the cloned derivatives of Ddp1 and can be used to directly transform D. discoideum amoebae, selecting for G418 resistance. Another recombinant is only 5.6 kb and resulted from a deletion of a 16.6-kb cloned Ddp1 hybrid plasmid. An analysis of the vector DNAs present in clones derived from single D. discoideum transformants is also described.
- Published
- 1985
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21. Myosin-Vb functions as a dynamic tether for peripheral endocytic compartments during transferrin trafficking
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Wood Patrick R, Addison Erin J, Provance D William, Chen David Z, Silan Colleen M, and Mercer John A
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Cytology ,QH573-671 - Abstract
Abstract Background Myosin-Vb has been shown to be involved in the recycling of diverse proteins in multiple cell types. Studies on transferrin trafficking in HeLa cells using a dominant-negative myosin-Vb tail fragment suggested that myosin-Vb was required for recycling from perinuclear compartments to the plasma membrane. However, chemical-genetic, dominant-negative experiments, in which myosin-Vb was specifically induced to bind to actin, suggested that the initial hypothesis was incorrect both in its site and mode of myosin-Vb action. Instead, the chemical-genetic data suggested that myosin-Vb functions in the actin-rich periphery as a dynamic tether on peripheral endosomes, retarding transferrin transport to perinuclear compartments. Results In this study, we employed both approaches, with the addition of overexpression of full-length wild-type myosin-Vb and switching the order of myosin-Vb inhibition and transferrin loading, to distinguish between these hypotheses. Overexpression of full-length myosin-Vb produced large peripheral endosomes. Chemical-genetic inhibition of myosin-Vb after loading with transferrin did not prevent movement of transferrin from perinuclear compartments; however, virtually all myosin-Vb-decorated particles, including those moving on microtubules, were halted by the inhibition. Overexpression of the myosin-Vb tail caused a less-peripheral distribution of early endosome antigen-1 (EEA1). Conclusion All results favored the peripheral dynamic tethering hypothesis.
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- 2008
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22. Gentamicin-Induced Nephrotoxicity in Rats Ameliorated and Healing Effects of Resveratrol
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Selma Bedirhan, Nil Comunoglu, Özge Uzun, Coskun Silan, Sanem Gökçen, Müjgan Cengiz, Silan, C., Uzun, Ö., Çomunoglu, N.Ü., Gokçen, S., Bedirhan, S., Cengiz, M., and Yeditepe Üniversitesi
- Subjects
Male ,antioxidant ,Lipid peroxidation ,Pharmaceutical Science ,gentamicin ,Resveratrol ,Pharmacology ,Kidney ,Antioxidants ,Nephrotoxicity ,chemistry.chemical_compound ,Malondialdehyde ,Stilbenes ,medicine ,Animals ,Urea ,Rats, Wistar ,Gentamicin ,Glutathione Transferase ,nephrotoxicity ,Sodium ,Kidney metabolism ,General Medicine ,Glutathione ,Catalase ,Anti-Bacterial Agents ,Rats ,Gentamicin Sulfate ,Kidney Tubules ,chemistry ,Biochemistry ,Creatinine ,Potassium ,Kidney Diseases ,Lipid Peroxidation ,Antioxidant ,Gentamicins ,medicine.drug - Abstract
Silan, Coskun/0000-0002-8352-6571; cengiz, mujgan/0000-0003-1030-5425; silan, coskun/0000-0002-8352-6571 WOS: 000243960400016 PubMed: 17202664 In this study, we aimed to investigate the possible protective effect of resveratrol on gentamicin induced nephrotoxicity. Experiments were carried out in male Wistar rats weighing 200-250g. Gentamicin sulfate (80 mg/kg per day i.p.), resveratrol (10 mg/kg per day i.p.) and gentamicin together with resveratrol were administered for 6 d. The animals were sacrificed 24 h after the last injection. Urine, blood samples and tissue samples were collected from the animals on the seventh day of the treatment before they were sacrificed. Kidneys were collected for histopathological studies and fixed in 10% buffered formalin solution. Tissue samples were stored at -70 degrees C in liquid nitrogen for the determination of glutathione (GSH), glutathione-S-transferase (GST), malondialdehyde (MDA) and catalase (CAT). Glutathione assay was determined by the method of Beutler et al. GST amounts were measured by the method of Habig et al. Catalase activitiy was tested by Aebi's method and MDA was determined according to Thayer's method. Blood urea level was significantly increased in the gentamicin treated group. The study showed lowered levels of urea and creatinine levels in resveratrol administered groups when compared with gentamicin administered rats, and the difference was statistically significant. It has been determined that resveratrol caused statistically significant decrease in lipid peroxidation and reduced the level of catalase. Histopathological examination showed that resveratrol prevented partly gentamicin induced tubular damage. The results histopathologically demonstrated that resveratrol has a protective effect against gentamicin induced nephrotoxicity, lipid peroxidation and cellular damage in rats.
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- 2007
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23. Drug-impregnated contact lenses via supercritical carbon dioxide: A viable solution for the treatment of bacterial and fungal keratitis.
- Author
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Gungor B, Erdogan H, Suner SS, Silan C, Saraydin SU, and Sahiner N
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- Drug Liberation, Contact Lenses microbiology, Fusarium drug effects, Humans, Hydrogels chemistry, Drug Delivery Systems, Solvents chemistry, Eye Infections, Fungal drug therapy, Eye Infections, Fungal microbiology, Carbon Dioxide chemistry, Keratitis drug therapy, Keratitis microbiology, Anti-Bacterial Agents chemistry, Anti-Bacterial Agents administration & dosage, Anti-Bacterial Agents pharmacology, Antifungal Agents chemistry, Antifungal Agents administration & dosage, Moxifloxacin administration & dosage, Moxifloxacin chemistry, Moxifloxacin pharmacology, Amphotericin B administration & dosage, Amphotericin B chemistry, Amphotericin B pharmacology
- Abstract
Keratitis is a corneal infection caused by various bacteria and fungi. Eye drop treatment of keratitis involves significant challenges due to difficulties in administration, inefficiencies in therapeutic dosage, and frequency of drug applications. All these are troublesome and result in unsuccessful treatment, high cost, time loss, development of drug resistance by microorganisms, and a massive burden on human health and the healthcare system. Most of the antibacterial and antifungal medications are non-water-soluble and/or include toxic drug formulations. Here, the aim was to develop drug-loaded contact lenses with therapeutic dosage formulations and extended drug release capability as an alternative to eye drops, by employing supercritical carbon dioxide (ScCO
2 ) as a drug impregnation solvent to overcome inefficient ophthalmic drug use. ScCO2 , known as a green solvent, has very low viscosity which provides high mass transfer power and could enhance drug penetration into contact lenses much better with respect to drug loading using other solvents. Here, moxifloxacin (MOX) antibiotic and amphotericin B (AMB) antifungal medicines were separately loaded into commercially available silicone hydrogel contact lenses through 1) drug adsorption from the aqueous solutions and 2) impregnation techniques via ScCO2 and their efficacies were compared. Drug impregnation parameters, i.e., 8-25 MPa pressure, 310-320 K temperature, 2-16-hour impregnation times, and the presence of ethanol as polar co-solvent were investigated for the optimization of the ScCO2 drug impregnation process. The highest drug loading and long-term release kinetic from the contact lenses were obtained at 25 MPa and 313 K with 2.5 h impregnation time by using 1 % ethanol (by volume). Furthermore, antibacterial/antifungal activities of the MOX- and AMB-impregnated contact lenses were effective against in vitro Pseudomonas aeruginosa (ATCC 10145) bacteria and Fusarium solani (ATCC 36031) fungus for up to one week. Consequently, the ScCO2 method can be effectively used to impregnate commercial contact lenses with drugs, and these can then be safely used for the treatment of keratitis. This offers a sustainable delivery system at effective dosage formulations with complete bacterial/fungal inhibition and termination, making it viable for real animal/human applications., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)- Published
- 2024
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24. Titanium platelet-rich fibrin (T-PRF) as high-capacity doxycycline delivery system.
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Ercan E, Suner SS, Silan C, Yilmaz S, Siddikoglu D, Sahiner N, and Tunali M
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- Anti-Bacterial Agents administration & dosage, Fibrin, Staphylococcus aureus drug effects, Titanium chemistry, Doxycycline administration & dosage, Platelet-Rich Fibrin
- Abstract
Objectives: Titanium platelet-rich fibrin (T-PRF), a second-generation autogenous blood concentrate with tough and thick fibrin meshwork activated by a titanium tube, was used as a drug carrier for doxycycline (Doxy) by injection. The objective of this study is to evaluate the loading capacity of T-PRF, release kinetics of doxycycline-loaded T-PRF, and its antibacterial effects against S. aureus and P. aeruginosa., Materials and Methods: The T-PRF and collagen were loaded with Doxy as T-PRF/Doxy and Collagen/Doxy, and their release and antibacterial activities against S. aureus and P. aeruginosa were investigated. Chemical characterization and morphological analysis were performed., Results: In comparison with collagen, approximately sevenfold more Doxy, 281 mg/g, was loaded into T-PRF. It was found that 25% of the loaded Doxy was released from T-PRF compared to only 12% from collagen within 72 h. The largest inhibition zone diameter (IZD) was observed for T-PRF/Dox with 32 ± 6 mm and 37 ± 5 mm for P. aereginosa and S. aureus, respectively. However, only 10 ± 5 mm and 10 ± 6 mm IZD were observed for bare T-PRF, and no inhibition zone was observed for the Collagen/Doxy group. A dense fibrin structure was visualized on SEM images of the T-PRF/Doxy group compared to the T-PRF group., Conclusions: T-PRF has higher Doxy loading capacity and long-acting antibacterial effects compared to collagen. T-PRF was shown to have potential autogenous long-term drug-carrying capability for doxycycline. Also, the potential fibrinophilic properties of Doxy were observed to strengthen the structure of T-PRF., Clinical Relevance: T-PRF is an autogenous drug career with high loading capacity and extended antibacterial effects for doxycycline. Doxycycline molecules can be visible on T-PRF fibers. This study suggests that T-PRF/Dox could be used as a proper antibiotic delivery device in the treatments of periodontitis and peri-implantitis., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2022
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25. Blau syndrome with a rare mutation in exon 9 of NOD2 gene.
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Velickovic J, Silan F, Bir FD, Silan C, Albuz B, and Ozdemir O
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- Adult, Alleles, Arthritis diagnosis, Arthritis physiopathology, Child, Dermatitis diagnosis, Dermatitis physiopathology, Exons, Female, Gene Expression, Granulomatous Disease, Chronic diagnosis, Granulomatous Disease, Chronic physiopathology, Headache diagnosis, Headache physiopathology, High-Throughput Nucleotide Sequencing, Humans, Male, Middle Aged, Sarcoidosis, Stroke diagnosis, Stroke physiopathology, Synovitis diagnosis, Synovitis physiopathology, Uveitis diagnosis, Uveitis physiopathology, Arthritis genetics, Dermatitis genetics, Granulomatous Disease, Chronic genetics, Headache genetics, Mutation, Missense, Nod2 Signaling Adaptor Protein genetics, Stroke genetics, Synovitis genetics, Uveitis genetics
- Abstract
Blau syndrome is an autosomal dominant rare disease caused by mutations in NOD2 gene. Less than 200 patients published with Blau Syndrome Worldwide. We reported a 41-year old female Turkish patient diagnosed as Blau syndrome. Granulomatous dermatitis and severe headache, as well as recurrent chest and pelvic pain have been present since she was 8 years old. Arthritis started when she was teenage, hypertension diagnosed when she was 20 and other symptoms also occurred during the lifetime (severe preeclampsia, ischemic stroke, recurrent hemiparesis, recurrent-transient-vision-loss and renal-artery-stenosis). Genomic DNA was isolated from peripheral blood and 12 genes sequenced in Autoinflammatory panel on IonTorrent-S5-NGS platform with Parseq-VariFind™AIPassay. NGS analysis showed 107 variants in in the index case, mainly benign with no strong association with Blau syndrome. Additionally, we identified one very rare missense mutation in NOD2 gene (c2803G>A, p.Val935Met) and in silico assessment of the mutation indicated possible pathogenic significance and strong association with Blau syndrome. In addition, we analyzed family members of the index case and identified the same mutation in NOD2 gene. The segregation analysis shows the presence of the same mutant allele in NOD2 gene in the index case affected sister, as well as in her son with arthralgia, while in her non affecter brother we didn't detect the Val935Met mutation in NOD2 gene. Blau Syndrome is known as a very rare disease, mainly caused by mutations in NOD2 gene. Missense mutation diagnosed in our case could be responsible for the phenotype of the index case. Our results indicate the importance of NGS testing and its major role in the detection of rare mutations that may responsible for the onset of autoinflammatory disorders.
- Published
- 2019
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26. Nitrogen and Sulfur Doped Carbon Dots from Amino Acids for Potential Biomedical Applications.
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Sahiner N, Suner SS, Sahiner M, and Silan C
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- Amino Acids chemical synthesis, Carbon chemistry, Fluorescent Dyes chemical synthesis, Healthy Volunteers, Hemolysis, Humans, Microwaves, Molecular Structure, Nitrogen chemistry, Sulfur chemistry, Amino Acids chemistry, Biocompatible Materials analysis, Biomedical Technology, Blood Coagulation Tests, Fluorescent Dyes chemistry, Quantum Dots chemistry
- Abstract
Nitrogen (N-) and sulfur (S-) doped carbon dots (CDs) were synthesized in a single step in a few min, 1-4 min via microwave technique from five different types of amino acids viz. Arginine (A), Lysine (L), Histidine (H), Cysteine (C), and Methionine (M). These amino acid derived N- and/or S- doped CDs were found to be in spherical shapes with 5-20 nm particle size range determined by Transition Electron Microscope (TEM) images and Dynamic Light Scattering (DLS) measurements. Thermal degradation, functional groups, and surface potential of the CDs were determined by Thermogravimetric Analysis (TGA), FT-IR spectroscopy, and zeta potential measurements, respectively. Although the zeta potential value of Cysteine derived CD (C-CD) was measured as -7.45±1.32 mV, the zeta potential values of A-CD, L-CD, H-CD, and M-CD particles were measured as +2.84±0.67, +2.61±1.0, +4.10±1.50 and+2.20±0.60 mV, respectively. Amongst the CDs, C- CDs was found to possess the highest quantum yield, 89%. Moreover, the blood compatibility test of CDs, determined with hemolysis and blood clotting tests was shown that CDs at 0.25 mg/mL concentration, CDs has less than 5% hemolysis ratio and higher than 50% blood clotting indexes. Furthermore, A-CD was modified with polyethyleneimine (PEI) and was found that the zeta potential values was increased to +34.41±4.17 mV (from +2.84±0.67 mV) inducing antimicrobial capability to these materials. Minimum Inhibition Concentration (MIC) of A-CD dots was found as 2.5 mg/mL whereas the PEI modified A-CDs, A-CD-PEI was found as 1 mg/mL against Escherichia coli ATCC 8739 (gram -) and Staphylococcus aureus ATCC 6538 (gram +) bacteria strains signifying the tunability of CDs.
- Published
- 2019
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27. Attenuation of partial unilateral ureteral obstruction - induced renal damage with hyperbaric oxygen therapy in a rat model.
- Author
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Sancak EB, Tan YZ, Turkon H, and Silan C
- Subjects
- Acute Kidney Injury blood, Acute Kidney Injury diagnostic imaging, Animals, Biomarkers blood, Disease Models, Animal, Male, Oxidative Stress, Rats, Rats, Wistar, Ureteral Obstruction blood, Acute Kidney Injury etiology, Acute Kidney Injury prevention & control, Hyperbaric Oxygenation, Ureteral Obstruction complications, Ureteral Obstruction therapy
- Abstract
Objective: The objective of the present study was to evaluate the effectiveness of HBO therapy on biochemical parameters, renal morphology and renal scintigraphy in rats undergoing chronic unilateral partial ureteral obstruction (UPUO)., Material and Methods: Thirty-five rats were divided into five equal groups: Control group; Sham group; HBO group; UPUO group and UPUO/HBO group. The effects of HBO therapy were examined using biochemical parameters and histopathological changes. After calculating the score for each histopathological change, the total histopathological score was obtained by adding all the scores. In addition, dynamic renal scintigraphy findings were evaluated., Results: Serum parameters indicating inflammation, serum tumor necrosis factoralpha, ischemia modified-albumin, IMA/albumin ratio and Pentraxin-3 levels, were observed to be high in the UPUO group and low in the UPUO/HBO treatment group. Similarly, in the treatment group, the reduction in malondialdehyde, total oxidant status and oxidative stress index levels and increase in total antioxidant capacity values were observed to be statistically significant compared to the UPUO group (p<0.001, p=0.007, p<0.001, p=0.001, respectively). The total score and apoptosis index significantly decreased after administration of HBO treatment. Dynamic 99mTc-MAG3 renal scintigraphy also showed convincing evidence regarding the protective nature of HBO against kidney injury. In the UPUO/HBO therapy group, the percentage contribution of each operated kidney increased significantly compared to the UPUO group (41.73% versus 32.72%)., Conclusion: The findings of this study indicate that HBO therapy had a reno-protective effect by reducing inflammation and oxidative stress, and preserving renal function after renal tissue damage due to induction of UPUO., (Copyright® by the International Brazilian Journal of Urology.)
- Published
- 2017
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28. Resveratrol did not alter blood pressure in rats with nitric oxide synthase-inhibited hypertension.
- Author
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Aydin M, Gungor B, Akdur AS, Aksulu HE, Silan C, Susam I, Cabuk AK, and Cabuk G
- Abstract
Background: Inhibition of nitric oxide synthase (NOS) is a well-known experimental model of hypertension (HT). It was shown that oxidative stress contributes to the pathogenesis of HT. Resveratrol is a potent anti-oxidant that is found in red grapes, peanuts and red wine. It improves the NO response and increases endothelial NOS expression, which causes endothelium-dependent vasorelaxation as well as renal vasodilation. We aimed to explore the effects of resveratrol on blood pressure, the water-salt balance and sodium excretion as a reflection of renal function in NOS-inhibited rat models., Methods: Thirty-five male Sprague-Dawley rats (200-250 g) were used in this study. In order to obtain hypertension models, an NOS inhibitor, N-nitro-L-arginin (L-NNA) was used. The rats were randomly divided into five groups: controls (given water and 0.8% salty diet) and four groups [given L-NNA, resveratrol (RSV) eluent, RSV, and L-NNA + RSV]. Blood pressures were measured indirectly by the tailcuff method on the first, seventh and 10th days. At the end of the study protocol (10th day), fluid balance, glomerular filtration rate, fractional sodium excretion, and blood and urine sodium and creatinine levels were measured., Results: At the end of the study protocol, blood pressures were higher in only the L-NNA group (117.8 ± 3.5 vs 149.5 ± 2.1 mmHg; p < 0.05), as expected. Additional applications of RSV with L-NNA could not prevent the increase in blood pressure (122.8 ± 7.3 vs 155.4 ± 4.4 mmHg; p < 0.05). There were no remarkable changes in water-salt balance and renal function with the application of resveratrol., Conclusion: Resveratrol was unable to prevent or reverse blood pressure increase in NOS-inhibited rats.
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- 2017
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29. P(TA) macro-, micro-, nanoparticle-embedded super porous p(HEMA) cryogels as wound dressing material.
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Sahiner N, Sagbas S, Sahiner M, and Silan C
- Subjects
- Blood Coagulation drug effects, Chromans chemistry, Escherichia coli drug effects, Gallic Acid chemistry, Hemolysis drug effects, Humans, Hydrolysis, Iron chemistry, Microbial Sensitivity Tests, Molecular Weight, Porosity, Staphylococcus aureus drug effects, Bandages, Cryogels chemistry, Nanoparticles chemistry, Polyhydroxyethyl Methacrylate chemistry, Tannins pharmacology, Wound Healing drug effects
- Abstract
Super porous poly(2-hydroxy ethyl methacrylate) (p(HEMA)) cryogel was successfully synthesized by using polyethylene glycol diacrylate (p(EGDA)) crosslinker under cryogenic conditions. Poly(Tannic acid) (p(TA)) macro-, micro-, and nanoparticles prepared from a natural polyphenol, tannic acid (TA), were embedded into p(HEMA) cryogel networks to obtain composite p(TA) particle-embedded p(HEMA) cryogel. Different size ranges of spherical p(TA) particles, 2000-500μm, 500-200μm, 200-20μm, and 20-0.5μm size, were included in the cryogel network and illustrated by digital camera, optic microscope, and SEM images of the microgel-cryogel network. The swelling properties and moisture content of p(TA) microgel-embedded p(HEMA) cryogel were investigated at wound healing pH conditions such as pH5.4, 7.4, and 9 at 37.5°C, and the highest swelling capacity was found at pH9 with 972±2% swelling in 30s. Higher amounts of DI water were quickly absorbed by p(HEMA)-based cryogel, and moisture retention within the cryogel structure for a longer time period at room temperature is due to existence of p(TA) particles. Degradation profiles of p(TA) particle-embedded p(HEMA) cryogel were shown to be controlled by different pH conditions, and a linear release profile was found with total cumulative release of 5.8±0.8mg/g TA up to 12days at pH7.4 and 37.5°C. The antioxidant behavior of degraded p(TA) particles from p(HEMA) cryogel were found as 46±1μgmL
-1 gallic acid equivalent and 165±18mMtroloxequivalentg-1 . The p(TA) particle-embedded p(HEMA) cryogel has high hemocompatibility with 0.0158±0.0126% hemolysis ratio, and effective hemostatic properties with 8.1±0.9 blood clotting index., (Copyright © 2016 Elsevier B.V. All rights reserved.)- Published
- 2017
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30. Inherently antioxidant and antimicrobial tannic acid release from poly(tannic acid) nanoparticles with controllable degradability.
- Author
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Sahiner N, Sagbas S, Aktas N, and Silan C
- Subjects
- Anti-Infective Agents pharmacology, Antioxidants pharmacology, Bacillus subtilis drug effects, Bacillus subtilis growth & development, Blood Coagulation drug effects, Candida albicans drug effects, Candida albicans growth & development, Chromans chemistry, Delayed-Action Preparations, Epoxy Compounds chemistry, Escherichia coli drug effects, Escherichia coli growth & development, Gels, Hemolysis drug effects, Humans, Hydrogen-Ion Concentration, Hydrolysis, Microbial Sensitivity Tests, Nanoparticles ultrastructure, Particle Size, Phosphates chemistry, Polymerization, Propylene Glycols chemistry, Pseudomonas aeruginosa drug effects, Pseudomonas aeruginosa growth & development, Staphylococcus aureus drug effects, Staphylococcus aureus growth & development, Static Electricity, Tannins pharmacology, Anti-Infective Agents chemistry, Antioxidants chemistry, Cross-Linking Reagents chemistry, Nanoparticles chemistry, Tannins chemistry
- Abstract
From a natural polyphenol, Tannic acid (TA), poly(TA) nanoparticles were readily prepared using a single step approach with three different biocompatible crosslinkers; trimethylolpropane triglycidyl ether (TMPGDE), poly(ethylene glycol) diglycidyl ether (PEGGE), and trisodium trimetaphosphate (STMP). P(TA) particles were obtained with controllable diameters between 400 to 800nm with -25mV surface charge. The effect of synthesis conditions, such as the emulsion medium, pH values of TA solution, and the type of crosslinker, on the shape, size, dispersity, yield, and degradability of poly(Tannic Acid) (p(TA)) nanoparticles was systematically investigated. The hydrolytic degradation amount in physiological pH conditions of 5.4, 7.4, and 9.0 at 37.5°C were found to be in the order TMPGDE
- Published
- 2016
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31. Biocompatible and biodegradable poly(Tannic Acid) hydrogel with antimicrobial and antioxidant properties.
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Sahiner N, Sagbas S, Sahiner M, Silan C, Aktas N, and Turk M
- Subjects
- Anti-Infective Agents pharmacology, Antioxidants pharmacology, Apoptosis, Biocompatible Materials pharmacology, Biopolymers pharmacology, Cell Line, Humans, Hydrogel, Polyethylene Glycol Dimethacrylate chemical synthesis, Hydrolysis, Materials Testing, Microbial Sensitivity Tests, Thermogravimetry, Anti-Infective Agents chemistry, Antioxidants chemistry, Biocompatible Materials chemistry, Biopolymers chemistry, Hydrogel, Polyethylene Glycol Dimethacrylate chemistry, Tannins chemistry
- Abstract
A novel resourceful bulk poly(Tannic Acid) (p(TA)) hydrogel was prepared by crosslinking TA molecules with an epoxy crosslinker, trimethylolpropane triglycidyl ether (TMPGDE), in an autoclave at 90°C for 2h. The obtained p(TA) hydrogels were in disk form and have highly porous morphology. The swelling characteristics of p(TA) hydrogels were investigated in wound healing pH conditions of pH 5.4, 7.4, and 9 at 37.5°C, and the hydrogels showed good swelling and moisture content behavior. Especially, p(TA) hydrogels were found to be sensitive to pH 9 with 1669% maximum swelling. P(TA) hydrogels were completely degraded at pH 9 hydrolytically in 9 days. Total phenol contents and the effects of scavenging ABTS(+) radicals of degraded p(TA) hydrogels at pH 5.4, 7.4, and 9 were evaluated and calculated in terms of gallic acid equivalent and trolox equivalent antioxidant capacity, respectively, and found to be very effective. Moreover, degraded p(TA) hydrogels display strong antimicrobial behavior against gram positive Staphylococcus aureus, Bacillus subtilis, gram negative Pseudomonas aeruginosa bacteria strains and Candida albicans fungus strain. The WST-1 results indicated that bulk p(TA) hydrogels have no cyctotoxicity to the L929 fibroblast cell line in vitro., (Copyright © 2015 Elsevier B.V. All rights reserved.)
- Published
- 2016
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32. Protective effect of syringic acid on kidney ischemia-reperfusion injury.
- Author
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Sancak EB, Akbas A, Silan C, Cakir DU, Turkon H, and Ozkanli SS
- Subjects
- Animals, Gallic Acid therapeutic use, Kidney pathology, Male, Rats, Rats, Wistar, Gallic Acid analogs & derivatives, Kidney blood supply, Reperfusion Injury prevention & control
- Abstract
The objective of the present study was to determine whether preischemic administration of syringic acid (SA) would attenuate renal ischemia-reperfusion injury (IRI). Rats were divided into three groups: Sham group; IR group; and IR + SA group. The effects of SA were examined using biochemical parameters including serum ischemia-modified albumin (IMA), total antioxidant status (TAS), total oxidant status (TOS), oxidative stress index (OSI), tissue superoxide dismutase (SOD), glutathione peroxidase (GPx), catalase (CAT) and malondialdehyde (MDA). The apoptosis status and histopathological changes were evaluated. After calculating the score for each histopathological change, the total score was obtained by summing all the scores. In the SA group, MDA, IMA, TOS, and OSI decreased significantly compared to the IR group. After SA administration, the increase in GPx activity was found to be significant. Apoptosis decreased significantly in the SA group compared with the IR group. The total score significantly decreased after administration of SA. Taken together, our findings suggest that SA preconditioning is effective in reducing tissue damage induced in kidney IRI. Renal histology also showed convincing evidence regarding the protective nature of SA.
- Published
- 2016
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33. Renoprotective Effect of Humic Acid on Renal Ischemia-Reperfusion Injury: An Experimental Study in Rats.
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Akbas A, Silan C, Gulpinar MT, Sancak EB, Ozkanli SS, and Cakir DU
- Subjects
- Animals, Apoptosis, Biomarkers metabolism, Cytoprotection, Disease Models, Animal, Kidney metabolism, Kidney pathology, Kidney Cortex Necrosis metabolism, Kidney Cortex Necrosis pathology, Male, Necrosis, Rats, Wistar, Reperfusion Injury metabolism, Reperfusion Injury pathology, Serum Albumin metabolism, Serum Albumin, Human, Antioxidants pharmacology, Humic Substances, Kidney drug effects, Kidney Cortex Necrosis prevention & control, Oxidative Stress drug effects, Reperfusion Injury prevention & control
- Abstract
Humic acid is an antioxidant molecule used in agriculture and livestock breeding, as well as in medicine. Our aim was to investigate the potential renoprotective effects of humic acid in a renal ischemia reperfusion model. Twenty-one rats were randomly divided into three equal groups. Intraperitoneal serum or humic acid was injected at 1, 12, and 24 h. Non-ischemic group I was evaluated as sham. The left renal artery was clamped in serum (group II) and intraperitoneal humic acid (group III) to subject to left renal ischemic reperfusion procedure. Ischemia and reperfusion time was 60 min for each. Total antioxidant status, total oxidative status, oxidative stress index, and ischemia-modified albumin levels were analyzed biochemically from the serum samples. Kidneys were evaluated histopatologically and immunohistochemically. Biochemical results showed that total oxidative status, ischemia-modified albumin, and oxidative stress index levels were significantly decreased, but total antioxidant status was increased in the humic acid group (III) compared with the ischemia group (II) On histopathological examination, renal tubular dilatation, tubular cell damage and necrosis, dilatation of Bowman's capsule, hyaline casts, and tubular cell spillage were decreased in the humic acid group (III) compared with the ischemia group (II). Immunohistochemical results showed that apoptosis was deteriorated in group III. Renal ischemia reperfusion injury was attenuated by humic acid administration. These observations indicate that humic acid may have a potential therapeutic effect on renal ischemia reperfusion injury by preventing oxidative stress.
- Published
- 2015
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34. The Neuroprotective Effect of Glycyrrhizic Acid on an Experimental Model of Focal Cerebral Ischemia in Rats.
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Akman T, Guven M, Aras AB, Ozkan A, Sen HM, Okuyucu A, Kalkan Y, Sehitoglu I, Silan C, and Cosar M
- Subjects
- Animals, Brain Ischemia metabolism, Brain Ischemia pathology, Male, Rats, Rats, Sprague-Dawley, Treatment Outcome, Anti-Inflammatory Agents therapeutic use, Brain Ischemia prevention & control, Disease Models, Animal, Glycyrrhizic Acid therapeutic use, Neuroprotective Agents therapeutic use
- Abstract
Cerebral ischemia is still one of the most important topics in neurosciences. Our study aimed to investigate the neuroprotective and anti-oxidant effects of glycyrrhizic acid on focal cerebral ischemia in rats. Twenty-four rats were divided equally into three groups. A middle cerebral artery occlusion model was performed in this study where sham and glycyrrhizic acid were administered intraperitoneally following middle cerebral artery occlusion. Group I was evaluated as control. Malondialdehyde (MDA), superoxide dismutase (SOD), and nuclear respiratory factor-1 (NRF1) levels were analyzed biochemically on the right cerebral hemisphere, while ischemic histopathological studies were completed to investigate the anti-oxidant status. Biochemical results showed that SOD and NRF1 levels were significantly increased in the glycyrrhizic acid group compared with the sham group while MDA levels were significantly decreased. On histopathological examination, cerebral edema, vacuolization, degeneration, and destruction of neurons were decreased in the glycyrrhizic acid group compared with the sham group. Cerebral ischemia was attenuated by glycyrrhizic acid administration. These observations indicate that glycyrrhizic acid may have potential as a therapeutic agent in cerebral ischemia by preventing oxidative stress.
- Published
- 2015
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35. Effects of Tannic Acid on the Ischemic Brain Tissue of Rats.
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Sen HM, Ozkan A, Guven M, Akman T, Aras AB, Sehitoglu I, Alacam H, Silan C, Cosar M, and Ozisik Karaman HI
- Subjects
- Animals, Antioxidants pharmacology, Brain metabolism, Brain pathology, Brain Ischemia metabolism, Brain Ischemia pathology, Male, Oxidative Stress drug effects, Oxidative Stress physiology, Rats, Rats, Sprague-Dawley, Reactive Oxygen Species antagonists & inhibitors, Reactive Oxygen Species metabolism, Tannins pharmacology, Antioxidants therapeutic use, Brain drug effects, Brain Ischemia drug therapy, Tannins therapeutic use
- Abstract
Many studies of brain ischemia have shown the role played by massive ischemia-induced production of reactive oxygen species, the main mechanism of neuronal death. However, currently, there is no treatment choice to prevent cell death triggered by reactive oxygen species. In our study, we researched the effects of tannic acid, an antioxidant, on the ischemic tissue of rats with induced middle cerebral artery occlusion. The animals were divided into three groups of eight animals. The sham group were only administered 10 % ethanol intraperitoneally, the second group had middle cerebral artery occlusion induced and were given 10 % ethanol intraperitoneally, while the third group had middle cerebral artery occlusion with 10 mg/kg dose tannic acid dissolved in 10 % ethanol administered within half an hour intraperitoneally. The rats were sacrificed 24 h later, and brain tissue was examined biochemically and histopathologically. Biochemical evaluation of brain tissue found that comparing the ischemic group with no treatment with the tannic acid-treated ischemia group; the superoxide dismutase (SOD) levels were higher, malondialdehyde (MDA) levels were lower, and nuclear respiratory factor-1 (NRF-1) was higher in the tannic acid-treated group. Histopathological examination showed that the histopathological results of the tannic acid group were better than the group not given tannic acid. Biochemical and histopathological results showed that tannic acid administration had an antioxidant effect on the negative effects of ischemia in brain tissue.
- Published
- 2015
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36. Effects of CYP2C19 and P2Y12 Gene Polymorphisms on Clinical Results of Patients Using Clopidogrel after Acute Ischemic Cerebrovascular Disease.
- Author
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Sen HM, Silan F, Silan C, Degirmenci Y, and Ozisik Kamaran HI
- Abstract
The CY2C19 and P2Y12 gene polymorphisms are responsible for resistance to clopidogrel, known as drug unresponsiveness. In this study we researched the effect of gene polymorphism on clinical results of patients who began clopidogrel therapy after acute ischemic cerebrovascular disease. The study included 51 patients. The patient group included patients who had begun prophylactic clopidogrel due to acute ischemic cerebrovascular disease in the last 2 years. All patients were monitored by the Neurology Outpatient Clinic at Çanakkale Onsekiz Mart Üniversity Research Hospital, Çanakkale, Turkey, and only those monitored for at least 1 year were included in the study. When the *1, *2 and *3 alleles of the CYP2C19 gene polymorphism were evaluated, two patients were homozygotes for *2/*2, 13 patients were heterozygous for *1/*2 and 36 patients were homozygotes for the wild type *1/*1. No patient had the *3 allele. Three heterozygous patients, one for *2/*2 and two for *1/*2, stopped clopidogrel therapy due to repeated strokes and began taking warfarin. When evaluating P2Y12 52 (G>T) and 34 (C>T) polymorphisms, all alleles were of the wild type. The CYP2C19 and P2Y12 gene polymorphisms may cause recurring strokes linked to insufficient response to treatment of ischemic cerebrovascular disease. In our patient group, three patients suffered repeated strokes and these patients had the CYP2C19*2 gene polymorphism. As a result, before medication use, genetic testing is important for human life, quality of life and economic burden.
- Published
- 2015
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37. Neuroprotective effect of p-coumaric acid in rat model of embolic cerebral ischemia.
- Author
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Guven M, Aras AB, Akman T, Sen HM, Ozkan A, Salis O, Sehitoglu I, Kalkan Y, Silan C, Deniz M, and Cosar M
- Abstract
Objectives: Stroke poses a crucial risk for mortality and morbidity. Our study aimed to investigate the effect of p-coumaric acid on focal cerebral ischemia in rats., Material and Methods: Rats were randomly divided into four groups, namely Group I (control rats), Group II (ischemia rats), Group III (6 hr ischemia + p-coumaric acid rats) and Group IV (24 hr ischemia + p-coumaric acid rats). Cerebral ischemia was induced via intraluminal monofilament occlusion model. In all groups, the brain was removed after the procedure and rats were sacrificed. Malondialdehyde, superoxide dismutase and nuclear respiratory factor-1 were measured in the ischemic hemisphere. The histopathological changes were observed in the right hemisphere within the samples. Functional assessment was performed for neurological deficit scores., Results: Following the treatment, biochemical factors changed significantly. Histopathologically, it was shown that p-coumaric acid decreased the oxidative damage. The neurological deficit scores of p-coumaric acid-treated rats were significantly improved after cerebral ischemia., Conclusion: Our results showed that p-coumaric acid is a neuroprotective agent on account of its strong anti-oxidant and anti-apoptotic features. Moreover, p-coumaric acid decreased the focal ischemia. Extra effort should be made to introduce p-coumaric acid as a promising therapeutic agent to be utilized for treatment of human cerebral ischemia in the future.
- Published
- 2015
38. Neuroprotective effect of humic Acid on focal cerebral ischemia injury: an experimental study in rats.
- Author
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Ozkan A, Sen HM, Sehitoglu I, Alacam H, Guven M, Aras AB, Akman T, Silan C, Cosar M, and Karaman HI
- Subjects
- Animals, Brain Ischemia metabolism, Brain Ischemia pathology, Inflammation Mediators antagonists & inhibitors, Inflammation Mediators metabolism, Male, Neuroprotective Agents pharmacology, Oxidative Stress drug effects, Oxidative Stress physiology, Rats, Rats, Sprague-Dawley, Treatment Outcome, Brain Ischemia prevention & control, Humic Substances, Neuroprotective Agents therapeutic use
- Abstract
Stroke is still a major cause of death and permanent neurological disability. As humic acids are well-known antioxidant molecules, the purpose of this study was to investigate the potential neuroprotective effects of humic acid in a focal cerebral ischemia model. Twenty-four rats were divided equally into three groups. A middle cerebral artery occlusion model was performed in this study where control (group II) and humic acid (group III) were administered intraperitoneally following an ischemic experimental procedure. Group I was evaluated as sham. Malondialdehyde (MDA), superoxide dismutase (SOD), and nuclear respiratory factor-1 (NRF-1) levels were analyzed biochemically on the right side of the ischemic cerebral hemisphere, while ischemic histopathological studies were completed on the left side to investigate the antioxidant status. Biochemical results showed that SOD and NRF-1 levels were significantly increased in the humic acid group (III) compared with the control group (II) while MDA levels were significantly decreased. On histopathological examination, cerebral edema, vacuolization, degeneration, and destruction of neural elements were decreased in the humic acid group (III) compared with the control group (II). Cerebral ischemia was attenuated by humic acid administration. These observations indicate that humic acid may have potential as a therapeutic agent in cerebral ischemia by preventing oxidative stress.
- Published
- 2015
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39. Genistein exerts neuroprotective effect on focal cerebral ischemia injury in rats.
- Author
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Aras AB, Guven M, Akman T, Alacam H, Kalkan Y, Silan C, and Cosar M
- Subjects
- Animals, Apoptosis drug effects, Caspase 3 metabolism, Caspase 9 metabolism, Cysteine Proteases metabolism, Inflammation drug therapy, Male, Malondialdehyde metabolism, Oxidative Stress drug effects, Random Allocation, Rats, Rats, Sprague-Dawley, Stroke drug therapy, Brain Ischemia drug therapy, Genistein therapeutic use, Neuroprotective Agents therapeutic use, Nuclear Respiratory Factor 1 metabolism, Superoxide Dismutase metabolism
- Abstract
Brain ischemia and treatment are one of the important topics in neurological science. Free oxygen radicals and inflammation formed after ischemia are accepted as the most important causes of damage. Currently, there are studies on many chemopreventive agents to prevent cerebral ischemia damage. Our aim is to research the preventive effect of the active ingredient in genistein, previously unstudied, on oxidative damage in cerebral ischemia. Rats were randomly divided into three groups: control group (no medication or surgical procedure), ischemia group, and artery ischemia+genistein group, sacrificed at 24 h after ischemia. The harvested brain tissue from the right hemisphere was investigated histopathologically and for tissue biochemistry. Superoxide dismutase and nuclear respiratory factor 1 values decreased after ischemia and they increased after genistein treatment, while increased malondialdehyde levels after ischemia reduced after treatment. Apoptosis-related cysteine peptidase caspase-3 and caspase-9 values increased after ischemia, but reduced after treatment. Our study revealed that genistein treatment in cerebral ischemia reduced oxidative stress and neuronal degeneration. We believe that genistein treatment may be an alternative treatment method.
- Published
- 2015
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40. Neuroprotective effects of daidzein on focal cerebral ischemia injury in rats.
- Author
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Aras AB, Guven M, Akman T, Ozkan A, Sen HM, Duz U, Kalkan Y, Silan C, and Cosar M
- Abstract
Daidzein, a plant extract, has antioxidant activity. It is hypothesized, in this study, that daidzein exhibits neuroprotective effects on cerebral ischemia. Rat models of middle cerebral artery occlusion were intraperitoneally administered daidzein. Biochemical and immunohistochemical tests showed that superoxide dismutase and nuclear respiratory factor 1 expression levels in the brain tissue decreased after ischemia and they increased obviously after daidzein administration; malondialdehyde level and apoptosis-related cysteine peptidase caspase-3 and caspase-9 immunoreactivity in the brain tissue increased after ischemia and they decreased obviously after daidzein administration. Hematoxylin-eosin staining and luxol fast blue staining results showed that intraperitoneal administration of daidzein markedly alleviated neuronal damage in the ischemic brain tissue. These findings suggest that daidzein exhibits neuroprotective effects on ischemic brain tissue by decreasing oxygen free radical production, which validates the aforementioned hypothesis.
- Published
- 2015
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41. Relationship between response to colchicine treatment and MDR1 polymorphism in familial Mediterranean fever patients.
- Author
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Uludag A, Silan C, Atik S, Akurut C, Uludag A, Silan F, and Ozdemir O
- Subjects
- ATP Binding Cassette Transporter, Subfamily B, Alleles, Amino Acid Substitution, Cytoskeletal Proteins genetics, DNA Mutational Analysis, Familial Mediterranean Fever diagnosis, Female, Gene Frequency, Genetic Predisposition to Disease, Genotype, Humans, Male, Prognosis, Pyrin, Treatment Outcome, ATP Binding Cassette Transporter, Subfamily B, Member 1 genetics, Colchicine therapeutic use, Familial Mediterranean Fever drug therapy, Familial Mediterranean Fever genetics, Polymorphism, Single Nucleotide
- Abstract
Aim: Investigate the relationship between MDR1 C3435T polymorphism and colchicine response in Familial Mediterranean fever (FMF) patients., Materials and Methods: Patients (n=50) who received colchicine regularly, were willing to participate in the study, and attended control visits were included in the study. MDR1 C3435T genotype was defined by the real-time polymerase chain reaction method. Patients were divided into three groups. Patients, who recovered from episodes with standard colchicine treatment, and had no attack in the last 1 year were accepted as complete; patients whose episode number and intensity were decreased with the ongoing standard treatment as partial; and patients whose episodes were not decreased despite the standard treatment as nonresponders., Results: MDR1 C and T allele frequencies of FMF patients with colchicine responses of complete, partial, and nonresponders were C=0.75 and T=0.25; C=0.56 and T=0.44; and C=0.50 and T=0.50, respectively. When complete responding patients were compared with the partial responding patients, subjects with CT genotype had 6.18 times more increased risk than with CC genotype (OR=6.18; p=0.015). Poor response risk of subjects with the T allele was increased 2.45 times more when compared with the C allele (p=0.03)., Conclusion: MDR1 gene C3435T polymorphism enacts an important role on colchicine response in FMF; good response to colchicine treatment was related to the C allele, whereas poor response was related to the T allele in FMF.
- Published
- 2014
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42. Pyrrolidine dithiocarbamate attenuates the development of monocrotaline-induced pulmonary arterial hypertension.
- Author
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Yavuz T, Uzun O, Macit A, Comunoglu C, Yavuz O, Silan C, Yuksel H, and Yildirim HA
- Subjects
- Animals, Disease Models, Animal, Endothelium, Vascular drug effects, Endothelium, Vascular metabolism, Endothelium, Vascular pathology, Erythrocytes drug effects, Familial Primary Pulmonary Hypertension, Hematocrit, Hypertension, Pulmonary chemically induced, Hypertension, Pulmonary pathology, Hypertrophy, Right Ventricular drug therapy, Hypertrophy, Right Ventricular metabolism, Hypertrophy, Right Ventricular pathology, Male, Malondialdehyde metabolism, Monocrotaline toxicity, Rats, Rats, Sprague-Dawley, Antioxidants pharmacology, Hypertension, Pulmonary prevention & control, Pyrrolidines pharmacology, Thiocarbamates pharmacology
- Abstract
We aimed to demonstrate the potential protective effects of pyrrolidine dithiocarbamate (PDTC) on monocrotaline (MCT)-induced pulmonary arterial hypertension (PAH). Adult male rats were randomly assigned to 4 groups: control group, MCT-treated rats only, MCT-injected rats treated with PDTC, and PDTC-treated rats only. Blood and tissue samples were collected after the sacrifice. Levels of malondialdehyde (MDA) were measured by using the thiobarbituric acid method. Total antioxidant status (TAS) was determined using a commercially available ImAnOx kit. A histopathological evaluation was accomplished by scoring the degree of severity. Endothelial damage of the main pulmonary artery was evaluated by immunohistochemical labeling of endothelial cells using anti-rat endothelial cell antigen 1 (RECA-1) antibody. MCT-induced right ventricular hypertrophy (RVH) was reduced significantly in the MCT+PDTC-treated group. MDA levels were significantly lowered in the MCT+PDTC-treated group. TAS was significantly higher in the MCT+PDTC-treated group when compared with the rats with PAH. Histopathological examination demonstrated that PDTC treatment reduced the development of inflammation, hemorrhage and congestion, and collagen deposition. In conclusion, PDTC attenuated PAH and protected pulmonary endothelium in rats administered MCT. These findings suggest that PDTC treatment may provide a new effective therapeutic approach in the treatment of PAH., (Copyright © 2013 Elsevier GmbH. All rights reserved.)
- Published
- 2013
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43. The prevalence of VKORC1 1639 G>A and CYP2C9*2*3 genotypes in patients that requiring anticoagulant therapy in Turkish population.
- Author
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Silan C, Dogan OT, Silan F, Kukulguven FM, Asgun HF, Ozdemir S, Uludag A, Atik S, Gungor B, Akdur S, Aksulu HE, and Ozdemir O
- Subjects
- Adult, Aged, Aged, 80 and over, Alleles, Cytochrome P-450 CYP2C9, Female, Follow-Up Studies, Gene Frequency genetics, Genotype, Humans, Male, Middle Aged, Prevalence, Turkey, Vitamin K Epoxide Reductases, Anticoagulants therapeutic use, Aryl Hydrocarbon Hydroxylases genetics, Mixed Function Oxygenases genetics, Polymorphism, Single Nucleotide genetics
- Abstract
The aim was to investigate the prevalence of VKORC1 and CYP2C9 genotypes in patients requiring anticoagulant therapy in two different region's populations of Turkey. The recent cohort included 292 patients that needed anticoagulant therapy, and who had a history of deep vein thrombosis and/or pulmonary artery thromboembolism. Genomic DNA was isolated from peripheral blood samples and the StripAssay reverse hybridization or Real Time PCR technique was used for genotype analysis. Genotypes for CYP2C9 were detected as follows: 165 (56.5 %) for CYP2C9*1/*1, 67 (23.0 %) for CYP2C9*1/*2, 25 (8.6 %) for CYP2C9*1/*3, 9 (3.0 %) for CYP2C9*2/*2, 21 (7.2 %) for CYP2C9*2/*3, 5(1.7 %) for CYP2C9*3/*3 for CYP2C9 and the allele frequencies were: 0.723 for allele*1, 0.182 for allele*2 and 0.095 for allele*3 respectively. Genotypes for VKORC1 were detected as follows: 64 (21.9 %) for GG, 220 (75.4 %) for GA and 8 (2.7 %) for AA alleles. The G allele frequency was detected as 0.596, and the A allele frequency was 0.404. The VKORC1 1639 G>A and CYP2C9 mutation prevalence and allele frequency of the current results from two different populations (Sivas and Canakkale) showed similarly very variable profiles when compared to the other results from the Turkish population.
- Published
- 2012
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44. Novel hydrogel particles and their IPN films as drug delivery systems with antibacterial properties.
- Author
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Silan C, Akcali A, Otkun MT, Ozbey N, Butun S, Ozay O, and Sahiner N
- Subjects
- Anti-Bacterial Agents pharmacology, Bacillus subtilis drug effects, Bacillus subtilis physiology, Escherichia coli drug effects, Escherichia coli physiology, Microbial Sensitivity Tests, Pseudomonas aeruginosa drug effects, Pseudomonas aeruginosa physiology, Staphylococcus aureus drug effects, Staphylococcus aureus physiology, Acrylic Resins, Anti-Bacterial Agents administration & dosage, Drug Delivery Systems, Hydrogels, Quaternary Ammonium Compounds
- Abstract
Poly(acrylonitrile) (p(AN))-based materials such poly(acrylonitrile-co-(3-acrylamidopropyl)-trimethylammonium chloride (p(AN-co-APTMACl)), poly(acrylonitrile-co-4-viniyl pyridine) (p(AN-co-4-VP)) and poly(acrylonitrile-co-N-isopropylacrylamide) (p(AN-co-NIPAM)) core-shell nanoparticles were prepared. The core materials, AN, in p(AN-co-4-VP) nanoparticles, were amidoximated and the shell materials, 4-VP, were quaternized to generate p(AN-co-4-VP)(+) and p(AN-co-4-VP)(++), single and double positively charged core-shell nanoparticles, respectively. Furthermore, interpenetrating microgels-hydrogel (IPN) polymeric networks were prepared by mixing double quaternized p(AN-co-4-VP)(++) core-shell particles with acrylamide (AAm) and 2-hydroxyethylmethacrylate (HEMA) before polymerization. A model drug, fluorescein sodium salt (FSS) was used in absorption/release studies from these IPNs. Moreover, the prepared and chemically modified particles were tested against Staphylococcus aureus ATCC6538, Pseduomonas aeruginosa ATCC9027, Bacillus subtilis ATCC6633, and Escherichia coli ATCC8739, and found that some of these particles had antibacterial properties against tested bacteria., (Copyright © 2011 Elsevier B.V. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
45. Combined effect of Factor V Leiden, MTHFR, and angiotensin-converting enzyme (insertion/deletion) gene mutations in hypertensive adult individuals: a population-based study from Sivas and Canakkale, Turkey.
- Author
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Demirel Y, Dogan S, Uludag A, Silan C, Atik S, Silan F, and Ozdemir O
- Subjects
- Adolescent, Adult, Cholesterol blood, Female, Heterozygote, Homozygote, Humans, Hypertension blood, Hypertension epidemiology, Lipoproteins, HDL blood, Lipoproteins, LDL blood, Male, Methylenetetrahydrofolate Reductase (NADPH2) metabolism, Middle Aged, Peptidyl-Dipeptidase A metabolism, Polymorphism, Genetic, Turkey epidemiology, Alleles, Factor V genetics, Hypertension genetics, INDEL Mutation, Methylenetetrahydrofolate Reductase (NADPH2) genetics, Peptidyl-Dipeptidase A genetics
- Abstract
Background: Hypertension is one of the leading causes of mortality and morbidity in the world, which is influenced by environmental and genetic factors. The methylenetetrahydrofolate reductase (MTHFR) and angiotensin-converting enzymes (ACE) are possible candidate genes that may influence both body fatness and blood pressure (BP). The purpose of this study was to examine the carriage of gene combinations of the ACE (insertion/deletion [I/D]), MTHFR 677T and 1298C, and lipid profiles in patients with essential hypertension (EH) in Turkey., Methods: A total of 150 adult individuals (50 hypertensive, 50 first-degree relatives, and 50 healthy controls) from Sivas/Turkey with the same age and gender were assessed for body composition, lipid profiles, resting BP, and gene profiles. Additionally, 149 individuals (99 hypertensive, 50 controls) from Canakkale/Turkey had been investigated for ACE I/D polymorphism. Peripheral blood samples were genotyped using strip assay reverse-hybridization multiplex polymerase chain reaction tests for target genes., Results: Heterozygous mutation in FV Leiden was found to be higher in the hypertensive and first-degree relatives when compared with the control group (p<0.05). Homozygous DD alleles of the ACE gene were also higher than the ACE I/D and control groups (p<0.05). The high rates of cholesterol and low-density lipoprotein and low rates of high-density lipoprotein were found in patients with EH when compared with the control., Conclusion: Results show that ACE with DD alleles and mutated alleles of FV Leiden and MTHFR genes were significantly different between genotypes and have a combined effect on EH in Turkish population. Further studies are needed to investigate the genetics of obesity, EH, and BP phenotypes in the current adult population.
- Published
- 2011
- Full Text
- View/download PDF
46. Association between ABCB1 (MDR1) gene 3435 C>T polymorphism and colchicine unresponsiveness of FMF patients.
- Author
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Ozen F, Silan C, Uludag A, Candan F, Silan F, Ozdemir S, Atik S, and Ozdemir O
- Subjects
- ATP Binding Cassette Transporter, Subfamily B, Adolescent, Adult, Child, Cohort Studies, DNA Mutational Analysis, Dose-Response Relationship, Drug, Drug Administration Schedule, Familial Mediterranean Fever diagnosis, Female, Gene Expression Regulation, Gene Frequency, Humans, Male, Pharmacogenetics, Severity of Illness Index, Treatment Failure, Young Adult, ATP Binding Cassette Transporter, Subfamily B, Member 1 genetics, Colchicine therapeutic use, Drug Resistance genetics, Familial Mediterranean Fever drug therapy, Familial Mediterranean Fever genetics, Polymorphism, Genetic
- Abstract
The multidrug resistance gene-1 (MDR1, adenosine triphosphate-binding cassette transporter: ABCB1, P-glycoprotein) encodes membrane proteins that play a crucial role in protecting cells from xenobiotics, chemicals, and drugs. The TT genotype of 3435 codon in exon 26 of MDR1 gene causes overexpression of gene activity and effluxes many chemically diverse compounds across the plasma membrane. We studied the association between C3435T polymorphisms (single nucleotide polymorphism) of MDR1 gene and colchicine-resistant familial Mediterranean fever (FMF) patients. Total genomic DNA samples from 52 FMF patients of colchicine unresponsiveness were used for FMF (MEFV) and MDR1 genes profile analyses. Target genes were genotyped by multiplex PCR-based reverse-hybridization Strip Assay method. The preliminary current results showed increased T allele frequency (0.596) in colchicine unresponsiveness of FMF patients. The distributions of the CC, CT, and TT genotypes in colchicine nonresponder FMF patients were 17%, 46%, and 37%, respectively. Our results indicate that C3435T polymorphism in exon 26 of MDR1 gene is associated with colchicine resistance in nonresponder FMF patients during the common therapy protocol.
- Published
- 2011
- Full Text
- View/download PDF
47. P(4-VP) based nanoparticles and composites with dual action as antimicrobial materials.
- Author
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Ozay O, Akcali A, Otkun MT, Silan C, Aktas N, and Sahiner N
- Subjects
- Absorption drug effects, Bacteria drug effects, Emulsions, Methacrylates chemistry, Methacrylates pharmacology, Microbial Sensitivity Tests, Nanocomposites ultrastructure, Nanoparticles ultrastructure, Particle Size, Spectroscopy, Fourier Transform Infrared, Anti-Infective Agents pharmacology, Nanocomposites chemistry, Nanoparticles chemistry, Polymers pharmacology, Polyvinyls pharmacology
- Abstract
Polymeric 4-VP (p(4-VP)) particles were synthesized in an oil-in-water microemulsion system using various amounts of ethylene glycol dimethacrylate (EGDMA) as crosslinker. The prepared p(4-VP) particles were chemically modified to obtain positively charged particles as polyelectrolytes. Furthermore, these p(4-VP) particles were used for in situ Ag and Cu metal nanoparticle syntheses to provide dual action with an additional advantage as bactericidal particles. The synthesized p(4-VP) particles with positive charges and metal constituents were tested for potential antibacterial action against various bacteria such as Staphylococcus aureus ATCC6538, Pseudomonas aeruginosa ATCC9027, Bacillus subtilis ATCC6633, Escherichia coli ATCC8739. It was found that p(4-VP) particles, especially the positively charged forms had potential as antibacterial materials. The synthesized particle dimensions were characterized with TEM, and DLS measurements. Chemical modification of the particles was confirmed by FT-IR spectroscopy and zeta potential measurements, and the metal nanoparticle contents were determined with thermogravimetric (TGA) studies., (Copyright 2010 Elsevier B.V. All rights reserved.)
- Published
- 2010
- Full Text
- View/download PDF
48. The effects of chronic resveratrol treatment on vascular responsiveness of streptozotocin-induced diabetic rats.
- Author
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Silan C
- Subjects
- Animals, Antioxidants metabolism, Blood Glucose metabolism, Body Weight drug effects, Dose-Response Relationship, Drug, Endothelium, Vascular drug effects, Endothelium, Vascular physiology, Male, Muscle Contraction drug effects, Muscle Relaxation drug effects, Muscle, Smooth, Vascular drug effects, Nitroprusside pharmacology, Oxidative Stress drug effects, Rats, Rats, Wistar, Resveratrol, Thoracic Arteries drug effects, Vasoconstrictor Agents pharmacology, Vasodilator Agents pharmacology, Anti-Inflammatory Agents, Non-Steroidal pharmacology, Blood Vessels drug effects, Diabetes Mellitus, Experimental physiopathology, Stilbenes pharmacology
- Abstract
Deficiency in the vasorelaxant capacity is a result of an oxidative stress in diabetic animals and seems to be an etiological factor of vascular complications of diabetes. The present study was designed to examine whether resveratrol (RSV), a polyphenolic compound which is naturally present in grape and red wine, has a protective effect on diabetic aorta. Resveratrol (5 mg/kg/d, i.p.) was administered for 42 d to streptozotocin (STZ) (60 mg/kg) induced diabetic rats. Loss of weight, hyperglycemia, and elevated levels of plasma malondialdehyde (MDA) were observed in diabetic rats. Resveratrol treatment was significantly effective for these metabolic and biochemical abnormalities. The contractile responses of the aorta were recorded. Compared with control subjects, the aorta showed significantly enhanced contractile responses to noradrenaline (NA), but not to potassium chloride (KCl), in diabetic rats. Treatment of diabetic rats with resveratrol significantly reversed the increases in responsiveness and sensitivity of aorta to noradrenaline. In diabetic aorta, the relaxation response to acetylcholine (Ach) was found to be significantly decreased compared with control subjects, and resveratrol treatment reversed this; no such change was observed in the relaxation response to sodium nitroprusside (SNP). These results indicated that resveratrol significantly improved not only glucose metabolism and oxidative injury but also impaired vascular responses in streptozotocin induced diabetic rats.
- Published
- 2008
- Full Text
- View/download PDF
49. Gentamicin-induced nephrotoxicity in rats ameliorated and healing effects of resveratrol.
- Author
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Silan C, Uzun O, Comunoğlu NU, Gokçen S, Bedirhan S, and Cengiz M
- Subjects
- Animals, Antioxidants therapeutic use, Catalase metabolism, Creatinine blood, Glutathione metabolism, Glutathione Transferase metabolism, Kidney metabolism, Kidney pathology, Kidney Diseases blood, Kidney Diseases chemically induced, Kidney Diseases metabolism, Kidney Diseases pathology, Kidney Tubules drug effects, Male, Malondialdehyde metabolism, Potassium blood, Rats, Rats, Wistar, Resveratrol, Sodium blood, Stilbenes therapeutic use, Urea blood, Anti-Bacterial Agents, Antioxidants pharmacology, Gentamicins, Kidney drug effects, Kidney Diseases prevention & control, Lipid Peroxidation drug effects, Stilbenes pharmacology
- Abstract
In this study, we aimed to investigate the possible protective effect of resveratrol on gentamicin induced nephrotoxicity. Experiments were carried out in male Wistar rats weighing 200-250 g. Gentamicin sulfate (80 mg/kg per day i.p.), resveratrol (10 mg/kg per day i.p.) and gentamicin together with resveratrol were administered for 6 d. The animals were sacrificed 24 h after the last injection. Urine, blood samples and tissue samples were collected from the animals on the seventh day of the treatment before they were sacrificed. Kidneys were collected for histopathological studies and fixed in 10% buffered formalin solution. Tissue samples were stored at -70 degrees C in liquid nitrogen for the determination of glutathione (GSH), glutathione-S-transferase (GST), malondialdehyde (MDA) and catalase (CAT). Glutathione assay was determined by the method of Beutler et al. GST amounts were measured by the method of Habig et al. Catalase activity was tested by Aebi's method and MDA was determined according to Thayer's method. Blood urea level was significantly increased in the gentamicin treated group. The study showed lowered levels of urea and creatinine levels in resveratrol administered groups when compared with gentamicin administered rats, and the difference was statistically significant. It has been determined that resveratrol caused statistically significant decrease in lipid peroxidation and reduced the level of catalase. Histopathological examination showed that resveratrol prevented partly gentamicin induced tubular damage. The results histopathologically demonstrated that resveratrol has a protective effect against gentamicin induced nephrotoxicity, lipid peroxidation and cellular damage in rats.
- Published
- 2007
- Full Text
- View/download PDF
50. Effect of Urtica Dioica on bacterial translocation in mechanic icter model.
- Author
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Aydin M, Ozaydin I, Ilce Z, Sahin I, Sencan I, Silan C, Yasar M, Aslaner A, and Ertas E
- Subjects
- Animals, Plant Extracts pharmacology, Rats, Bacterial Translocation drug effects, Models, Biological, Phytotherapy, Plants, Medicinal, Urtica dioica chemistry
- Published
- 2006
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