253 results on '"P. A. MacAry"'
Search Results
2. Progress with COVID vaccine development and implementation
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Titball, Richard W., Bernstein, David I., Fanget, Nicolas V. J., Hall, Roy A., Longet, Stephanie, MacAry, Paul A., Rupp, Richard E., van Gils, Marit, von Messling, Veronika, Walker, David H., and Barrett, Alan D. T.
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- 2024
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3. Durable cross-protective neutralizing antibody responses elicited by lipid nanoparticle-formulated SARS-CoV-2 mRNA vaccines
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Bae, Ki Hyun, Shunmuganathan, Bhuvaneshwari, Zhang, Li, Lim, Andrew, Gupta, Rashi, Wang, Yanming, Chua, Boon Lin, Wang, Yang, Gu, Yue, Qian, Xinlei, Tan, Isabelle Siang Ling, Purushotorman, Kiren, MacAry, Paul A., White, Kevin P., and Yang, Yi Yan
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- 2024
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4. Madagascar rural observatory surveys, a longitudinal dataset on household living conditions 1995–2015
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Velomalala Solo Andrianjafindrainibe, Nicole Andrianirina, Florent Bédécarrats, Isabelle Droy, Jean-Luc Dubois, Jeanne de Montalembert, Bako Nirina Rabevohitra, Rolland Rafidimanana, Patrick Rasolofo, Raphaël Ratovoarinony, Lalasoa Anjarafara Onivola Ratsaramiarina, Jean Dieudonné Ravelonandro, Voahirana Razanamavo, Mireille Razafindrakoto, Bezaka Rivolala, François Roubaud, and Camille Saint-Macary
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Science - Abstract
Abstract A Rural Observatory System (ROS) was established in Madagascar to address the lack of socioeconomic data on rural areas. It collected, analyzed, and disseminated data to help formulate and evaluate development policies. From 1995 to 2015, the ROS surveyed a total of 26 areas. The ROS methodology involved annual household panel surveys using consistent questionnaires supplemented by modules covering new themes. Qualitative community surveys were used to understand local features and dynamics. The site selection combined quantitative and qualitative insights to reflect the diversity of Madagascar’s rural challenges. Quality control was comprehensive, with measures such as limiting the number of daily surveyor interviews and daily field supervision. By making this data available for 21 consecutive years, along with documentation, metadata, and code with analysis examples, we aim to facilitate their discovery, assessment, and understanding by researchers, policymakers, and social organizations. To our knowledge, this is the only available data for an in-depth analysis of the situation and trends in the rural areas of Madagascar.
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- 2024
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5. An anti-LpqH human monoclonal antibody from an asymptomatic individual mediates protection against Mycobacterium tuberculosis.
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Krishnananthasivam, Shivankari, Li, Hao, Bouzeyen, Rania, Shunmuganathan, Bhuvaneshwari, Purushotorman, Kiren, Liao, Xinlei, Du, Fengjiao, Friis, Claudia, Crawshay-Williams, Felicity, Boon, Low, Xinlei, Qian, Chan, Conrad, Sobota, Radoslaw, Kozma, Mary, Jo, Valeria, Wang, Guirong, Huang, Hairong, Floto, Andreas, Bifani, Pablo, MacAry, Paul, and Javid, Babak
- Abstract
Tuberculosis (TB) is an airborne disease caused by Mycobacterium tuberculosis (Mtb). Whilst a functional role for humoral immunity in Mtb protection remains poorly defined, previous studies have suggested that antibodies can contribute towards host defense. Thus, identifying the critical components in the antibody repertoires from immune, chronically exposed, healthy individuals represents an approach for identifying new determinants for natural protection. In this study, we performed a thorough analysis of the IgG/IgA memory B cell repertoire from occupationally exposed, immune volunteers. We detail the identification and selection of a human monoclonal antibody that exhibits protective activity in vivo and show that it targets a virulence factor LpqH. Intriguingly, protection in both human ex vivo and murine challenge experiments was isotype dependent, with most robust protection being mediated via IgG2 and IgA. These data have important implications for our understanding of natural mucosal immunity for Mtb and highlight a new target for future vaccine development.
- Published
- 2023
6. Progress with COVID vaccine development and implementation
- Author
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Richard W. Titball, David I. Bernstein, Nicolas V. J. Fanget, Roy A. Hall, Stephanie Longet, Paul A. MacAry, Richard E. Rupp, Marit van Gils, Veronika von Messling, David H. Walker, and Alan D. T. Barrett
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Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2024
- Full Text
- View/download PDF
7. Durable cross-protective neutralizing antibody responses elicited by lipid nanoparticle-formulated SARS-CoV-2 mRNA vaccines
- Author
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Ki Hyun Bae, Bhuvaneshwari Shunmuganathan, Li Zhang, Andrew Lim, Rashi Gupta, Yanming Wang, Boon Lin Chua, Yang Wang, Yue Gu, Xinlei Qian, Isabelle Siang Ling Tan, Kiren Purushotorman, Paul A. MacAry, Kevin P. White, and Yi Yan Yang
- Subjects
Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract The advent of SARS-CoV-2 variants with defined mutations that augment pathogenicity and/or increase immune evasiveness continues to stimulate global efforts to improve vaccine formulation and efficacy. The extraordinary advantages of lipid nanoparticles (LNPs), including versatile design, scalability, and reproducibility, make them ideal candidates for developing next-generation mRNA vaccines against circulating SARS-CoV-2 variants. Here, we assess the efficacy of LNP-encapsulated mRNA booster vaccines encoding the spike protein of SARS-CoV-2 for variants of concern (Delta, Omicron) and using a predecessor (YN2016C isolated from bats) strain spike protein to elicit durable cross-protective neutralizing antibody responses. The mRNA-LNP vaccines have desirable physicochemical characteristics, such as small size (~78 nm), low polydispersity index (90%). We employ in vivo bioluminescence imaging to illustrate the capacity of our LNPs to induce robust mRNA expression in secondary lymphoid organs. In a BALB/c mouse model, a three-dose subcutaneous immunization of mRNA-LNPs vaccines achieved remarkably high levels of cross-neutralization against the Omicron B1.1.529 and BA.2 variants for extended periods of time (28 weeks) with good safety profiles for all constructs when used in a booster regime, including the YN2016C bat virus sequences. These findings have important implications for the design of mRNA-LNP vaccines that aim to trigger durable cross-protective immunity against the current and newly emerging variants.
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- 2024
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8. Patient preferences for the design of a pharmacy-based colorectal cancer screening program
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Brenner, Alison T., Waters, Austin R., Wangen, Mary, Rohweder, Catherine, Odebunmi, Olufeyisayo, Marciniak, Macary Weck, Ferrari, Renée M., Wheeler, Stephanie B., and Shah, Parth D.
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- 2023
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9. Findings From a National Survey of Older US Adults on Patient Willingness to Use Telehealth Services: Cross-Sectional Survey
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Olufeyisayo O Odebunmi, Tamera D Hughes, Austin R Waters, Benjamin Y Urick, Caroline Herron, Mary Wangen, Catherine Rohweder, Renée M Ferrari, Macary W Marciniak, Stephanie B Wheeler, Alison T Brenner, and Parth D Shah
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Computer applications to medicine. Medical informatics ,R858-859.7 ,Public aspects of medicine ,RA1-1270 - Abstract
BackgroundTelehealth (telemedicine and telepharmacy) services increase access to patient services and ensure continuity of care. However, few studies have assessed factors that influence patients’ willingness to use telehealth services, and we sought to investigate this. ObjectiveThis study aims to examine respondents’ (aged between 45 and 75 years) willingness to use telehealth services (telepharmacy and telemedicine) and the correlates of the willingness to use telehealth services. MethodsWe administered a cross-sectional national survey of 1045 noninstitutionalized US adults aged between 45 and 75 years in March and April 2021. Multiple logistic regression analyses were used to identify demographic and health service use correlates of self-reported willingness to use telehealth services. ResultsOverall willingness to use telemedicine was high (674/1045, 64.5%). Adults aged 55 years and older were less willing to use telemedicine (aged between 55 and 64 years: odds ratio [OR] 0.61, 95% CI 0.42-0.86; aged 65 years or older: OR 0.33, 95% CI 0.22-0.49) than those younger than 55 years. Those with a regular provider (OR 1.01, 95% CI 1-1.02) and long travel times (OR 1.75, 95% CI 1.03-2.98) were more willing to use telemedicine compared to those without a regular provider and had shorter travel times, respectively. Willingness to use telemedicine services increased from 64.5% (674/1045) to 83% (867/1045) if the service was low-cost or insurance-covered, was with their existing health care provider, or was easy-to-use. Overall willingness to use telepharmacy was 76.7% (801/1045). Adults aged older than 55 years were less willing to use telepharmacy (aged between 55 and 64 years: OR 0.57, 95% CI 0.38-0.86; aged 65 years or older: OR 0.24, 95% CI 0.15-0.37) than those younger than 55 years. Those who rated pharmacy service quality higher were more willing to use telepharmacy (OR 1.06, 95% CI 1.03-1.09) than those who did not. ConclusionsRespondents were generally willing to use telehealth (telemedicine and telepharmacy) services, but the likelihood of their being willing to use telehealth decreased as they were older. For those initially unwilling (aged 55 years or older) to use telemedicine services, inexpensive or insurance-covered services were acceptable.
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- 2024
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10. Employment of a high throughput functional assay to define the critical factors that influence vaccine induced cross-variant neutralizing antibodies for SARS-CoV-2
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Yue Gu, Bhuvaneshwari Shunmuganathan, Xinlei Qian, Rashi Gupta, Rebecca S. W. Tan, Mary Kozma, Kiren Purushotorman, Tanusya M. Murali, Nikki Y. J. Tan, Peter R. Preiser, Julien Lescar, Haziq Nasir, Jyoti Somani, Paul A. Tambyah, SCOPE Cohort Study Group, Kenneth G. C. Smith, Laurent Renia, Lisa F. P. Ng, David C. Lye, Barnaby E. Young, and Paul A. MacAry
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Medicine ,Science - Abstract
Abstract The scale and duration of neutralizing antibody responses targeting SARS-CoV-2 viral variants represents a critically important serological parameter that predicts protective immunity for COVID-19. In this study, we describe the development and employment of a new functional assay that measures neutralizing antibodies for SARS-CoV-2 and present longitudinal data illustrating the impact of age, sex and comorbidities on the kinetics and strength of vaccine-induced antibody responses for key variants in an Asian volunteer cohort. We also present an accurate quantitation of serological responses for SARS-CoV-2 that exploits a unique set of in-house, recombinant human monoclonal antibodies targeting the viral Spike and nucleocapsid proteins and demonstrate a reduction in neutralizing antibody titres across all groups 6 months post-vaccination. We also observe a marked reduction in the serological binding activity and neutralizing responses targeting recently newly emerged Omicron variants including XBB 1.5 and highlight a significant increase in cross-protective neutralizing antibody responses following a third dose (boost) of vaccine. These data illustrate how key virological factors such as immune escape mutations combined with host demographic factors such as age and sex of the vaccinated individual influence the strength and duration of cross-protective serological immunity for COVID-19.
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- 2023
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11. Defining neutralization and allostery by antibodies against COVID-19 variants
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Nikhil Kumar Tulsian, Raghuvamsi Venkata Palur, Xinlei Qian, Yue Gu, Bhuvaneshwari D/O Shunmuganathan, Firdaus Samsudin, Yee Hwa Wong, Jianqing Lin, Kiren Purushotorman, Mary McQueen Kozma, Bei Wang, Julien Lescar, Cheng-I Wang, Ravindra Kumar Gupta, Peter John Bond, and Paul Anthony MacAry
- Subjects
Science - Abstract
Abstract The changing landscape of SARS-CoV-2 Spike protein is linked to the emergence of variants, immune-escape and reduced efficacy of the existing repertoire of anti-viral antibodies. The functional activity of neutralizing antibodies is linked to their quaternary changes occurring as a result of antibody-Spike trimer interactions. Here, we reveal the conformational dynamics and allosteric perturbations linked to binding of novel human antibodies and the viral Spike protein. We identified epitope hotspots, and associated changes in Spike dynamics that distinguish weak, moderate and strong neutralizing antibodies. We show the impact of mutations in Wuhan-Hu-1, Delta, and Omicron variants on differences in the antibody-induced conformational changes in Spike and illustrate how these render certain antibodies ineffective. Antibodies with similar binding affinities may induce destabilizing or stabilizing allosteric effects on Spike, with implications for neutralization efficacy. Our results provide mechanistic insights into the functional modes and synergistic behavior of human antibodies against COVID-19 and may assist in designing effective antiviral strategies.
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- 2023
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12. Platform for the interdisciplinary study of cardiovascular, metabolic and neurovascular diseases (PICMAN) protocol
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Mayank Dalakoti, Melvin Khee Shing Leow, Chin Meng Khoo, Hayang Yang, Lieng Hsi Ling, Mark Muthiah, Eunice Tan, Jonathan Lee, Yock Young Dan, Nicholas Chew, Wei Qiang Seow, Poh Loong Soong, Louis Gan, Rijan Gurung, Matthew Ackers-Johnson, Han Wei Hou, Karishma Sachaphibulkij, Paul MacAry, Gwen Low, Christy Ang, Tee Joo Yeo, Andie Hartanto Djohan, Tony Li, Wesley Yeung, Rodney Soh, Ching Hui Sia, Vinay Panday, Shaun S. E. Loong, Benjamin Y. Q. Tan, Leonard L. L. Yeo, Lynette Teo, Pierce Chow, and Roger Foo
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Medicine ,Science - Abstract
Abstract Through extensive multisystem phenotyping, the central aim of Project PICMAN is to correlate metabolic flexibility to measures of cardiometabolic health, including myocardial diastolic dysfunction, coronary and cerebral atherosclerosis, body fat distribution and severity of non-alcoholic fatty liver disease. This cohort will form the basis of larger interventional trials targeting metabolic inflexibility in the prevention of cardiovascular disease. Participants aged 21–72 years with no prior manifest atherosclerotic cardiovascular disease (ASCVD) are being recruited from a preventive cardiology clinic and an existing cohort of non-alcoholic fatty liver disease (NAFLD) in an academic medical centre. A total of 120 patients will be recruited in the pilot phase of this study and followed up for 5 years. Those with 10-year ASCVD risk ≥ 5% as per the QRISK3 calculator are eligible. Those with established diabetes mellitus are excluded. Participants recruited undergo a detailed assessment of health behaviours and physical measurements. Participants also undergo a series of multimodality clinical phenotyping comprising cardiac tests, vascular assessments, metabolic tests, liver and neurovascular testing. Blood samples are also being collected and banked for plasma biomarkers, ‘multi-omics analyses’ and for generation of induced pluripotent stem cells (iPSC). Extensive evidence points to metabolic dysregulation as an early precursor of cardiovascular disease, particularly in Asia. We hypothesise that quantifiable metabolic inflexibility may be representative of an individual in his/her silent, but high-risk progression towards insulin resistance, diabetes and cardiovascular disease. The platform for interdisciplinary cardiovascular-metabolic-neurovascular diseases (PICMAN) is a pilot, prospective, multi-ethnic cohort study.
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- 2023
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13. An anti-LpqH human monoclonal antibody from an asymptomatic individual mediates protection against Mycobacterium tuberculosis
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Shivankari Krishnananthasivam, Hao Li, Rania Bouzeyen, Bhuvaneshwari Shunmuganathan, Kiren Purushotorman, Xinlei Liao, Fengjiao Du, Claudia Guldager Kring Friis, Felicity Crawshay-Williams, Low Heng Boon, Qian Xinlei, Conrad En Zuo Chan, Radoslaw Sobota, Mary Kozma, Valeria Barcelli, Guirong Wang, Hairong Huang, Andreas Floto, Pablo Bifani, Babak Javid, and Paul A. MacAry
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Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Tuberculosis (TB) is an airborne disease caused by Mycobacterium tuberculosis (Mtb). Whilst a functional role for humoral immunity in Mtb protection remains poorly defined, previous studies have suggested that antibodies can contribute towards host defense. Thus, identifying the critical components in the antibody repertoires from immune, chronically exposed, healthy individuals represents an approach for identifying new determinants for natural protection. In this study, we performed a thorough analysis of the IgG/IgA memory B cell repertoire from occupationally exposed, immune volunteers. We detail the identification and selection of a human monoclonal antibody that exhibits protective activity in vivo and show that it targets a virulence factor LpqH. Intriguingly, protection in both human ex vivo and murine challenge experiments was isotype dependent, with most robust protection being mediated via IgG2 and IgA. These data have important implications for our understanding of natural mucosal immunity for Mtb and highlight a new target for future vaccine development.
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- 2023
- Full Text
- View/download PDF
14. Part 1. Evaluation of the overall performance of winegrowing systems in the Bordeaux region and of agroecological transition scenarios (Background and Methodology)
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Francis Macary and Nawel Aouadi
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Agriculture (General) ,S1-972 ,Plant culture ,SB1-1110 - Abstract
The agroecological transition is an essential issue for vineyards, given the high pressure surrounding the use of pesticides to protect the crop. Major changes are required in winegrowing systems in order to achieve sharp reductions in the use of these inputs. With the aim of providing technical and practical benchmarks on the performance of agroecological systems, we have built and evaluated scenarios using multiple-criteria decision analysis.
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- 2024
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15. Part 2. Evaluation of the overall performance of winegrowing systems in the Bordeaux region and of agroecological transition scenarios (Results and Discussion)
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Francis Macary and Nawel Aouadi
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Agriculture (General) ,S1-972 ,Plant culture ,SB1-1110 - Abstract
The agroecological transition is an essential issue for vineyards, given the high pressure surrounding the use of pesticides to protect the crop. Major changes are required in winegrowing systems in order to achieve sharp reductions in the use of these inputs. With the aim of providing technical and practical benchmarks on the performance of agroecological systems, we have built and evaluated scenarios using multiple-criteria decision analysis. The background to the study and methodology are described in Part 1 (Macary and Aoudi, 2024).
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- 2024
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16. Employment of a high throughput functional assay to define the critical factors that influence vaccine induced cross-variant neutralizing antibodies for SARS-CoV-2
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Gu, Yue, Shunmuganathan, Bhuvaneshwari, Qian, Xinlei, Gupta, Rashi, Tan, Rebecca S. W., Kozma, Mary, Purushotorman, Kiren, Murali, Tanusya M., Tan, Nikki Y. J., Preiser, Peter R., Lescar, Julien, Nasir, Haziq, Somani, Jyoti, Tambyah, Paul A., Smith, Kenneth G. C., Renia, Laurent, Ng, Lisa F. P., Lye, David C., Young, Barnaby E., and MacAry, Paul A.
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- 2023
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17. Platform for the interdisciplinary study of cardiovascular, metabolic and neurovascular diseases (PICMAN) protocol
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Dalakoti, Mayank, Leow, Melvin Khee Shing, Khoo, Chin Meng, Yang, Hayang, Ling, Lieng Hsi, Muthiah, Mark, Tan, Eunice, Lee, Jonathan, Dan, Yock Young, Chew, Nicholas, Seow, Wei Qiang, Soong, Poh Loong, Gan, Louis, Gurung, Rijan, Ackers-Johnson, Matthew, Hou, Han Wei, Sachaphibulkij, Karishma, MacAry, Paul, Low, Gwen, Ang, Christy, Yeo, Tee Joo, Djohan, Andie Hartanto, Li, Tony, Yeung, Wesley, Soh, Rodney, Sia, Ching Hui, Panday, Vinay, Loong, Shaun S. E., Tan, Benjamin Y. Q., Yeo, Leonard L. L., Teo, Lynette, Chow, Pierce, and Foo, Roger
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- 2023
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18. Defining neutralization and allostery by antibodies against COVID-19 variants
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Tulsian, Nikhil Kumar, Palur, Raghuvamsi Venkata, Qian, Xinlei, Gu, Yue, D/O Shunmuganathan, Bhuvaneshwari, Samsudin, Firdaus, Wong, Yee Hwa, Lin, Jianqing, Purushotorman, Kiren, Kozma, Mary McQueen, Wang, Bei, Lescar, Julien, Wang, Cheng-I, Gupta, Ravindra Kumar, Bond, Peter John, and MacAry, Paul Anthony
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- 2023
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19. Author Correction: An anti-LpqH human monoclonal antibody from an asymptomatic individual mediates protection against Mycobacterium tuberculosis
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Krishnananthasivam, Shivankari, Li, Hao, Bouzeyen, Rania, Shunmuganathan, Bhuvaneshwari, Purushotorman, Kiren, Liao, Xinlei, Du, Fengjiao, Friis, Claudia Guldager Kring, Crawshay-Williams, Felicity, Boon, Low Heng, Xinlei, Qian, Chan, Conrad En Zuo, Sobota, Radoslaw, Kozma, Mary, Barcelli, Valeria, Wang, Guirong, Huang, Hairong, Floto, Andreas, Bifani, Pablo, Javid, Babak, and MacAry, Paul A.
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- 2023
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20. SHEAR saliva collection device augments sample properties for improved analytical performance
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Shang Wei Song, Rashi Gupta, Niharika Jothilingam, Xinlei Qian, Yue Gu, V Vien Lee, Yoann Sapanel, David Michael Allen, John Eu Li Wong, Paul MacAry, Dean Ho, and Agata Blasiak
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antigen rapid test ,infectious diseases ,point‐of‐care ,saliva collection device ,saliva‐based diagnostic ,sample homogenizer ,Chemical engineering ,TP155-156 ,Biotechnology ,TP248.13-248.65 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Abstract Despite being a convenient clinical substrate for biomonitoring, saliva's widespread utilization has not yet been realized. The non‐Newtonian, heterogenous, and highly viscous nature of saliva complicate the development of automated fluid handling processes that are vital for accurate diagnoses. Furthermore, conventional saliva processing methods are resource and/or time intensive precluding certain testing capabilities, with these challenges aggravated during a pandemic. The conventional approaches may also alter analyte structure, reducing application opportunities in point‐of‐care diagnostics. To overcome these challenges, we introduce the SHEAR saliva collection device that mechanically processes saliva, in a rapid and resource‐efficient way. We demonstrate the device's impact on reducing saliva's viscosity, improving sample's uniformity, and increasing diagnostic performance of a COVID‐19 rapid antigen test. Additionally, a formal user experience study revealed generally positive comments. SHEAR saliva collection device may support realization of the saliva's potential, particularly in large‐scale and/or resource‐limited settings for global and community diagnostics.
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- 2023
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21. Quel est le rôle des retenues collinaires pour limiter les flux de pesticides dans le paysage agricole ?
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Gwenaël IMFELD, Sylvain PAYRAUDEAU, Sabine SAUVAGE, Francis MACARY, Cédric CHAUMONT, Jérémie D. LEBRUN, Anne PROBST, José-Miguel SÁNCHEZ-PÉREZ, Jean-Luc PROBST, and Julien TOURNEBIZE
- Subjects
retenue collinaire ,bassin versant ,transfert de pesticide ,pollution agricole ,écosystème aquatique ,Environmental technology. Sanitary engineering ,TD1-1066 ,Environmental sciences ,GE1-350 - Abstract
Les systèmes aquatiques tels que les mares, les zones humides, les bassins d’orage, les retenues collinaires, ci-après nommées « retenues d’eau », sont des systèmes de rétention d'eau omniprésents dans les bassins versants agricoles. Ces retenues opèrent comme des réacteurs biogéochimiques naturels, contrôlant la dissipation et le transfert des contaminants agricoles, dont les pesticides, à l'échelle du bassin versant. De façon complémentaire aux mesures et aux pratiques de réduction voire d’élimination de l’utilisation des pesticides de synthèse, le projet PESTIPOND (2018-2023), financé par l’Agence nationale de la recherche (ANR), s’est intéressé au rôle des retenues dans les transferts de pesticides à l'échelle du bassin versant. Les résultats principaux sont présentés dans cet article. PESTIPOND a permis de mieux comprendre, hiérarchiser et prédire les processus qui conditionnent la dissipation des pesticides dans les retenues et comment la dissipation des pesticides dans les retenues régit le transfert de pesticides à l'échelle du bassin versant dans des conditions hydro-climatiques et des pratiques d'exploitation agricole variables. Pour intégrer les aspects multi-échelles et dynamiques de cette problématique, un cadre de modélisation tenant compte du rôle des retenues à l'échelle du bassin versant est proposé pour améliorer la prédiction du transfert de pesticides et l'évaluation des risques de transfert vers les écosystèmes aquatiques.
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- 2023
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22. Dimethyl sulfide cycling in the sea surface microlayer in the southwestern Pacific – Part 1: Enrichment potential determined using a novel sampler
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A. D. Saint-Macary, A. Marriner, T. Barthelmeß, S. Deppeler, K. Safi, R. Costa Santana, M. Harvey, and C. S. Law
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Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
Elevated dimethyl sulfide (DMS) concentrations in the sea surface microlayer (SML) have been previously related to DMS air–sea flux anomalies in the southwestern Pacific. To further address this, DMS, its precursor dimethylsulfoniopropionate (DMSP), and ancillary variables were sampled in the SML and also subsurface water at 0.5 m depth (SSW) in different water masses east of New Zealand. Despite high phytoplankton biomass at some stations, the SML chlorophyll a enrichment factor (EF) was low (< 1.06), and DMSP was enriched at one station with DMSP EF ranging from 0.81 to 1.25. DMS in the SML was determined using a novel gas-permeable tube technique which measured consistently higher concentrations than with the traditional glass plate technique; however, significant DMS enrichment was present at only one station, with the EF ranging from 0.40 to 1.22. SML DMSP and DMS were influenced by phytoplankton community composition, with correlations with dinoflagellate and Gymnodinium biomass, respectively. DMSP and DMS concentrations were also correlated between the SML and SSW, with the difference in ratio attributable to greater DMS loss to the atmosphere from the SML. In the absence of significant enrichment, DMS in the SML did not influence DMS emissions, with the calculated air–sea DMS flux of 2.28 to 11.0 µmol m−2 d−1 consistent with climatological estimates for the region. These results confirm previous regional observations that DMS is associated with dinoflagellate abundance but indicate that additional factors are required to support significant enrichment in the SML.
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- 2023
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23. Defining the specificity and function of a human neutralizing antibody for Hepatitis B virus
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Saket Jhajharia, Fritz Lai, Heng Boon Low, Kiren Purushotorman, Bhuvaneshwari D/O Shunmuganathan, Conrad En Zuo Chan, Rachel Hammond, Hans-Jürgen Netter, Qingfeng Chen, Seng Gee Lim, and Paul A. MacAry
- Subjects
Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Hepatitis B Virus (HBV) is a hepadnavirus that is the principal pathogen underlying viral liver disease in human populations. In this study, we describe the isolation and characterization of a fully human monoclonal antibody for HBV. This HuMab was isolated by a combinatorial screen of the memory B-cell repertoire from an acute/recovered HBV-infected patient. Lead candidate selection was based upon strong binding and neutralizing activity for live HBV. We provide a detailed biochemical/biophysical, and subclass characterization of its specificity and affinity against all of the principal HBV genotypes combined with a functional analysis of its in vitro activity. We also demonstrate its potential as a prophylaxis/therapy in vivo using human liver chimeric mouse models for HBV infection. These data have important implications for our understanding of natural human immunity to HBV and suggest that this potentially represents a new antibody-based anti-viral candidate for prophylaxis and/or therapy for HBV infection.
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- 2022
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24. Dimethyl sulfide cycling in the sea surface microlayer in the southwestern Pacific – Part 2: Processes and rates
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A. D. Saint-Macary, A. Marriner, S. Deppeler, K. A. Safi, and C. S. Law
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Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
As the sea surface microlayer (SML) is the uppermost oceanic layer and differs in biogeochemical composition to the underlying subsurface water (SSW), it is important to determine whether processes in the SML modulate gas exchange, particularly for climate active gases. Enrichment of dimethyl sulfide (DMS) and its precursor dimethylsulfoniopropionate (DMSP) has been reported in the SML, but it remains unclear how this is maintained whilst DMS is lost to the atmosphere. To examine this, a comprehensive study of DMS source and sink processes, including production, consumption, and net response to irradiance, was carried out in deck-board incubations of SML water at five locations in different water masses in the southwestern Pacific east of New Zealand. Net consumption of DMSP and production of DMS in the light and dark occurred at all sites. The net response of DMS and DMSP to irradiance varied between stations but was always lower than conversion of DMSP to DMS in the dark. In addition, DMS photolytic turnover was slower than reported elsewhere, which was unexpected given the high light exposure in the SML incubations. Although no relationships were apparent between DMS process rates and biogeochemical variables, including chlorophyll a, bacteria, and phytoplankton groups, net bacterial DMSP consumption was correlated with DMSP and DMS concentrations and also dinoflagellate and Gymnodinium spp. biomass, supporting the findings of a companion study that dinoflagellates play an important role in DMS cycling in the SML. However, net DMS production rates and accumulation were low relative to regional air–sea DMS loss, indicating that DMS cycling within the SML is unlikely to influence regional DMS emissions.
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- 2022
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25. Atypical B cells and impaired SARS-CoV-2 neutralization following heterologous vaccination in the elderly
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Isabella A.T.M. Ferreira, Colin Y.C. Lee, William S. Foster, Adam Abdullahi, Lisa M. Dratva, Zewen Kelvin Tuong, Benjamin J. Stewart, John R. Ferdinand, Stephane M. Guillaume, Martin O.P. Potts, Marianne Perera, Benjamin A. Krishna, Ana Peñalver, Mia Cabantous, Steven A. Kemp, Lourdes Ceron-Gutierrez, Soraya Ebrahimi, Paul Lyons, Kenneth G.C. Smith, John Bradley, Dami A. Collier, Laura E. McCoy, Agatha van der Klaauw, James E.D. Thaventhiran, I. Sadaf Farooqi, Sarah A. Teichmann, Paul A. MacAry, Rainer Doffinger, Mark R. Wills, Michelle A. Linterman, Menna R. Clatworthy, and Ravindra K. Gupta
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CP: Immunology ,Biology (General) ,QH301-705.5 - Abstract
Summary: Suboptimal responses to a primary vaccination course have been reported in the elderly, but there is little information regarding the impact of age on responses to booster third doses. Here, we show that individuals 70 years or older (median age 73, range 70–75) who received a primary two-dose schedule with AZD1222 and booster third dose with mRNA vaccine achieve significantly lower neutralizing antibody responses against SARS-CoV-2 spike pseudotyped virus compared with those younger than 70 (median age 66, range 54–69) at 1 month post booster. Impaired neutralization potency and breadth post third dose in the elderly is associated with circulating “atypical” spike-specific B cells expressing CD11c and FCRL5. However, when considering individuals who received three doses of mRNA vaccine, we did not observe differences in neutralization or enrichment in atypical B cells. This work highlights the finding that AdV and mRNA COVID-19 vaccine formats differentially instruct the memory B cell response.
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- 2023
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26. Lower vaccine-acquired immunity in the elderly population following two-dose BNT162b2 vaccination is alleviated by a third vaccine dose
- Author
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Laurent Renia, Yun Shan Goh, Angeline Rouers, Nina Le Bert, Wan Ni Chia, Jean-Marc Chavatte, Siew‐Wai Fong, Zi Wei Chang, Nicole Ziyi Zhuo, Matthew Zirui Tay, Yi-Hao Chan, Chee Wah Tan, Nicholas Kim‐Wah Yeo, Siti Naqiah Amrun, Yuling Huang, Joel Xu En Wong, Pei Xiang Hor, Chiew Yee Loh, Bei Wang, Eve Zi Xian Ngoh, Siti Nazihah Mohd Salleh, Guillaume Carissimo, Samanzer Dowla, Alicia Jieling Lim, Jinyan Zhang, Joey Ming Er Lim, Cheng-I. Wang, Ying Ding, Surinder Pada, Louisa Jin Sun, Jyoti Somani, Eng Sing Lee, Desmond Luan Seng Ong, SCOPE Cohort Study Group, Yee‐Sin Leo, Paul A. MacAry, Raymond Tzer Pin Lin, Lin-Fa Wang, Ee Chee Ren, David C. Lye, Antonio Bertoletti, Barnaby Edward Young, and Lisa F. P. Ng
- Subjects
Science - Abstract
Responses to SARS-CoV-2 vaccines in different populations are important to define efficacy. Here the authors show using a cohort in Singapore that two doses of mRNA vaccine is less effective in recipients over 60 years of age and that a further dose of vaccine can improve these antibody levels.
- Published
- 2022
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27. DEVELOPMENT OF LABORATORY AND POINT OF CARE DETECTION PLATFORMS FOR COVID-19 NEUTRALIZING ANTIBODIES AND IMMUNE STATUS
- Author
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D. Trudil, L. Loomis, P. MacAry, and G. Almond
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Infectious and parasitic diseases ,RC109-216 - Abstract
Intro: Neutralizing antibody responses, including the omicron and other variants targeting SARS-CoV-2, are important serological parameter that may predict protective immunity for COVI-19. This protection status may have a direct impact on the response to this virus including vaccination and protection strategies. Methods: The ImTracker Assay™ developed by the National University of Singapore and Gen-Y Biologics is designed to detect and quantify the inhibition of Spike-RBD binding to ACE-2 as a surrogate for SARS-CoV-2 VOC neutralization. Human antibodies that bind to neutralization determinants on Spike-RBDs will block or occlude binding of these viral proteins to the human host receptor, ACE-2. The binding activity of ACE-2 to Spike-RBD in a test sample is compared with negative control sera (minus neutralizing antibodies) where unrestricted binding between the two receptors is not inhibited and a QC reagent (positive control) where binding between Spike-RBD to ACE-2 is inhibited by a defined VOC crossneutralizing agent. A Lateral Flow Immunoassay (LFI), using saliva as a sample, has been developed to detect both mucosal IgG and IgA antibodies. The assays utilized RBD and Nucleocapsid antigens. Findings: The assay has been evaluated against all variants including Omicron B.1.1.529 and BA.2 and more recently BA.4 and BA.5. The Assay successfully evaluated over 3,800 positive and 1,300 negative samples utilizing the pseudovirus neutralization test (PVNT) as a reference assay, calibrating this with the WHO international standard for anti-SARS-CoV-2 immunoglobulin. Conclusion: ImTracker Assay™ had an overall Sensitivity of 100% and a specificity >96% when benchmarked against a standard PVNT assay. The assay can add additional new variants in less than 45 days. The LFI Immune status provided correlation to vaccination status and when compared to a standard ELISA assay and PVNT neutralizaton assay,provided comparable results.
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- 2023
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28. The rapid progress in COVID vaccine development and implementation
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Barrett, Alan D. T., Titball, Richard W., MacAry, Paul A., Rupp, Richard E., von Messling, Veronika, Walker, David H., and Fanget, Nicolas V. J.
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- 2022
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29. Defining the specificity and function of a human neutralizing antibody for Hepatitis B virus
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Jhajharia, Saket, Lai, Fritz, Low, Heng Boon, Purushotorman, Kiren, Shunmuganathan, Bhuvaneshwari D/O, Chan, Conrad En Zuo, Hammond, Rachel, Netter, Hans-Jürgen, Chen, Qingfeng, Lim, Seng Gee, and MacAry, Paul A.
- Published
- 2022
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30. Lower vaccine-acquired immunity in the elderly population following two-dose BNT162b2 vaccination is alleviated by a third vaccine dose
- Author
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Renia, Laurent, Goh, Yun Shan, Rouers, Angeline, Le Bert, Nina, Chia, Wan Ni, Chavatte, Jean-Marc, Fong, Siew‐Wai, Chang, Zi Wei, Zhuo, Nicole Ziyi, Tay, Matthew Zirui, Chan, Yi-Hao, Tan, Chee Wah, Yeo, Nicholas Kim‐Wah, Amrun, Siti Naqiah, Huang, Yuling, Wong, Joel Xu En, Hor, Pei Xiang, Loh, Chiew Yee, Wang, Bei, Ngoh, Eve Zi Xian, Salleh, Siti Nazihah Mohd, Carissimo, Guillaume, Dowla, Samanzer, Lim, Alicia Jieling, Zhang, Jinyan, Lim, Joey Ming Er, Wang, Cheng-I., Ding, Ying, Pada, Surinder, Sun, Louisa Jin, Somani, Jyoti, Lee, Eng Sing, Ong, Desmond Luan Seng, Leo, Yee‐Sin, MacAry, Paul A., Lin, Raymond Tzer Pin, Wang, Lin-Fa, Ren, Ee Chee, Lye, David C., Bertoletti, Antonio, Young, Barnaby Edward, and Ng, Lisa F. P.
- Published
- 2022
- Full Text
- View/download PDF
31. A rapid simple point-of-care assay for the detection of SARS-CoV-2 neutralizing antibodies
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Patthara Kongsuphol, Huan Jia, Hoi Lok Cheng, Yue Gu, Bhuvaneshwari D/O Shunmuganathan, Ming Wei Chen, Sing Mei Lim, Say Yong Ng, Paul Ananth Tambyah, Haziq Nasir, Xiaohong Gao, Dousabel Tay, Seunghyeon Kim, Rashi Gupta, Xinlei Qian, Mary M. Kozma, Kiren Purushotorman, Megan E. McBee, Paul A. MacAry, Hadley D. Sikes, and Peter R. Preiser
- Subjects
Medicine - Abstract
Kongsuphol et al. develop a paper-based, vertical flow assay to detect SARS-CoV-2 neutralizing antibodies. The point-of-care assay has comparable performance to lab-based tests and provides results in 10 min.
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- 2021
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32. Emotional scene remembering: A combination of disturbing and facilitating effects of emotion?
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David Bouvarel, Jeremy Gardette, Manon Saint-Macary, and Pascal Hot
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attentional capture ,visual complexity ,trade-off effect ,diffuse emotion ,focal emotion ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
An emotion-induced memory trade-off effect is frequently reported when participants have to memorize complex items that include both neutral and emotional features. This bias corresponds to better remembering of central emotional information accompanied by poor performance related to neutral background information. Although the trade-off effect has been mainly associated with attentional bias toward emotional content, findings suggest that other non-attentional cognitive processes could also be involved. The aim of this work was to assess whether emotional effects would be reported apart from their influence on attentional processing in an immediate delay memory task. Three studies were conducted. In Study 1, manipulation of the diffusion quality of emotional content allowed us to select focal emotional pictures vs. diffuse emotional pictures, which prevented attentional focus. The two studies that followed consisted of a recognition task of low- and high-complexity pictures in which we used partial visual cues during the test that could display either the emotional elements (i.e., central patch cues, Study 2) or the peripheral elements (i.e., peripheral patch cues, Study 3) of the focal emotional pictures. Results from Studies 2 and 3 replicated traditional trade-off effects only for high-complexity pictures. In addition, diffuse emotional pictures were associated with lower memory performance than were neutral pictures, suggesting that emotion features could both disturb and enhance (via their attentional effect) encoding processes.
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- 2022
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33. Author Correction: An anti-LpqH human monoclonal antibody from an asymptomatic individual mediates protection against Mycobacterium tuberculosis
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Shivankari Krishnananthasivam, Hao Li, Rania Bouzeyen, Bhuvaneshwari Shunmuganathan, Kiren Purushotorman, Xinlei Liao, Fengjiao Du, Claudia Guldager Kring Friis, Felicity Crawshay-Williams, Low Heng Boon, Qian Xinlei, Conrad En Zuo Chan, Radoslaw Sobota, Mary Kozma, Valeria Barcelli, Guirong Wang, Hairong Huang, Andreas Floto, Pablo Bifani, Babak Javid, and Paul A. MacAry
- Subjects
Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2023
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34. Codominant IgG and IgA expression with minimal vaccine mRNA in milk of BNT162b2 vaccinees
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Jia Ming Low, Yue Gu, Melissa Shu Feng Ng, Zubair Amin, Le Ye Lee, Yvonne Peng Mei Ng, Bhuvaneshwari D/O Shunmuganathan, Yuxi Niu, Rashi Gupta, Paul Anantharajah Tambyah, Paul A. MacAry, Liang Wei Wang, and Youjia Zhong
- Subjects
Immunologic diseases. Allergy ,RC581-607 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Lactating women can produce protective antibodies in their milk after vaccination, which has informed antenatal vaccination programs for diseases such as influenza and pertussis. However, whether SARS-CoV-2-specific antibodies are produced in human milk as a result of COVID-19 vaccination is still unclear. In this study, we show that lactating mothers who received the BNT162b2 vaccine secreted SARS-CoV-2-specific IgA and IgG antibodies into milk, with the most significant increase at 3–7 days post-dose 2. Virus-specific IgG titers were stable out to 4–6 weeks after dose 2. In contrast, SARS-CoV-2-specific IgA levels showed substantial decay. Vaccine mRNA was detected in few milk samples (maximum of 2 ng/ml), indicative of minimal transfer. Additionally, infants who consumed post-vaccination human milk had no reported adverse effects up to 28 days post-ingestion. Our results define the safety and efficacy profiles of the vaccine in this demographic and provide initial evidence for protective immunity conferred by milk-borne SARS-CoV-2-specific antibodies. Taken together, our study supports recommendations for uninterrupted breastfeeding subsequent to mRNA vaccination against COVID-19.
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- 2021
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35. Oceanic phytoplankton are a potentially important source of benzenoids to the remote marine atmosphere
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Manon Rocco, Erin Dunne, Maija Peltola, Neill Barr, Jonathan Williams, Aurélie Colomb, Karl Safi, Alexia Saint-Macary, Andrew Marriner, Stacy Deppeler, James Harnwell, Cliff Law, and Karine Sellegri
- Subjects
Geology ,QE1-996.5 ,Environmental sciences ,GE1-350 - Abstract
A group of aromatic hydrocarbons in the remote marine atmosphere, typically classified as anthropogenic pollutants, are attributable to local biogenic sources, according to shipborne observations and mesocosm experiments.
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- 2021
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36. Southern Ocean cloud and aerosol data: a compilation of measurements from the 2018 Southern Ocean Ross Sea Marine Ecosystems and Environment voyage
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S. Kremser, M. Harvey, P. Kuma, S. Hartery, A. Saint-Macary, J. McGregor, A. Schuddeboom, M. von Hobe, S. T. Lennartz, A. Geddes, R. Querel, A. McDonald, M. Peltola, K. Sellegri, I. Silber, C. S. Law, C. J. Flynn, A. Marriner, T. C. J. Hill, P. J. DeMott, C. C. Hume, G. Plank, G. Graham, and S. Parsons
- Subjects
Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
Due to its remote location and extreme weather conditions, atmospheric in situ measurements are rare in the Southern Ocean. As a result, aerosol–cloud interactions in this region are poorly understood and remain a major source of uncertainty in climate models. This, in turn, contributes substantially to persistent biases in climate model simulations such as the well-known positive shortwave radiation bias at the surface, as well as biases in numerical weather prediction models and reanalyses. It has been shown in previous studies that in situ and ground-based remote sensing measurements across the Southern Ocean are critical for complementing satellite data sets due to the importance of boundary layer and low-level cloud processes. These processes are poorly sampled by satellite-based measurements and are often obscured by multiple overlying cloud layers. Satellite measurements also do not constrain the aerosol–cloud processes very well with imprecise estimation of cloud condensation nuclei. In this work, we present a comprehensive set of ship-based aerosol and meteorological observations collected on the 6-week Southern Ocean Ross Sea Marine Ecosystem and Environment voyage (TAN1802) voyage of RV Tangaroa across the Southern Ocean, from Wellington, New Zealand, to the Ross Sea, Antarctica. The voyage was carried out from 8 February to 21 March 2018. Many distinct, but contemporaneous, data sets were collected throughout the voyage. The compiled data sets include measurements from a range of instruments, such as (i) meteorological conditions at the sea surface and profile measurements; (ii) the size and concentration of particles; (iii) trace gases dissolved in the ocean surface such as dimethyl sulfide and carbonyl sulfide; (iv) and remotely sensed observations of low clouds. Here, we describe the voyage, the instruments, and data processing, and provide a brief overview of some of the data products available. We encourage the scientific community to use these measurements for further analysis and model evaluation studies, in particular, for studies of Southern Ocean clouds, aerosol, and their interaction. The data sets presented in this study are publicly available at https://doi.org/10.5281/zenodo.4060237 (Kremser et al., 2020).
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- 2021
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37. Global Assessment of Dengue Virus-Specific CD4+ T Cell Responses in Dengue-Endemic Areas.
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Grifoni, Alba, Angelo, Michael, Lopez, Benjamin, ORourke, Patrick, Sidney, John, Cerpas, Cristhiam, Balmaseda, Angel, Silveira, Cassia, Maestri, Alvino, Costa, Priscilla, Durbin, Anna, Diehl, Sean, Phillips, Elizabeth, Mallal, Simon, De Silva, Aruna, Nchinda, Godwin, Nkenfou, Celine, Collins, Matthew, de Silva, Aravinda, Lim, Mei, Macary, Paul, Tatullo, Filippo, Solomon, Tom, Satchidanandam, Vijaya, Desai, Anita, Ravi, Vasanthapram, Coloma, Josefina, Turtle, Lance, Rivino, Laura, Kallas, Esper, Peters, Bjoern, Harris, Eva, Sette, Alessandro, and Weiskopf, Daniela
- Subjects
CD4+ T cells ,HLA ,adaptive immunity ,dengue virus ,epitope - Abstract
BACKGROUND: Dengue is a major public health problem worldwide. Assessment of adaptive immunity is important to understanding immunopathology and to define correlates of protection against dengue virus (DENV). To enable global assessment of CD4+ T cell responses, we mapped HLA-DRB1-restricted DENV-specific CD4+ T cell epitopes in individuals previously exposed to DENV in the general population of the dengue-endemic region of Managua, Nicaragua. METHODS: HLA class II epitopes in the population of Managua were identified by an in vitro IFNγ ELISPOT assay. CD4+ T cells purified by magnetic bead negative selection were stimulated with HLA-matched epitope pools in the presence of autologous antigen-presenting cells, followed by pool deconvolution to identify specific epitopes. The epitopes identified in this study were combined with those previously identified in the DENV endemic region of Sri Lanka, to generate a megapool (MP) consisting of 180 peptides specifically designed to achieve balanced HLA and DENV serotype coverage. The DENV CD4MP180 was validated by intracellular cytokine staining assays. RESULTS: We detected responses directed against a total of 431 epitopes, representing all 4 DENV serotypes, restricted by 15 different HLA-DRB1 alleles. The responses were associated with a similar pattern of protein immunodominance, overall higher magnitude of responses, as compared to what was observed previously in the Sri Lanka region. Based on these epitope mapping studies, we designed a DENV CD4 MP180 with higher and more consistent coverage, which allowed the detection of CD4+ T cell DENV responses ex vivo in various cohorts of DENV exposed donors worldwide, including donors from Nicaragua, Brazil, Singapore, Sri Lanka, and U.S. domestic flavivirus-naïve subjects immunized with Tetravalent Dengue Live-Attenuated Vaccine (TV005). This broad reactivity reflects that the 21 HLA-DRB1 alleles analyzed in this and previous studies account for more than 80% of alleles present with a phenotypic frequency ≥5% worldwide, corresponding to 92% phenotypic coverage of the general population (i.e., 92% of individuals express at least one of these alleles). CONCLUSION: The DENV CD4 MP180 can be utilized to measure ex vivo responses to DENV irrespective of geographical location.
- Published
- 2017
38. Immune and pathophysiologic profiling of antenatal coronavirus disease 2019 in the GIFT cohort: A Singaporean case-control study
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Yue Gu, Jia Ming Low, Jolene Su Yi Tan, Melissa Shu Feng Ng, Lisa F. P. Ng, Bhuvaneshwari Shunmuganathan, Rashi Gupta, Paul A. MacAry, Zubair Amin, Le Ye Lee, Derrick Lian, Lynette Pei-Chi Shek, Youjia Zhong, and Liang Wei Wang
- Subjects
SARS-CoV-2 ,antenatal COVID-19 ,transplacental antibody transfer ,breast milk antibodies ,placental inflammation ,GIFT ,Pediatrics ,RJ1-570 - Abstract
COVID-19 can be severe in pregnant women, and have adverse consequences for the subsequent infant. We profiled the post-infectious immune responses in maternal and child blood as well as breast milk in terms of antibody and cytokine expression and performed histopathological studies on placentae obtained from mothers convalescent from antenatal COVID-19. Seventeen mother-child dyads (8 cases of antenatal COVID-19 and 9 healthy unrelated controls; 34 individuals in total) were recruited to the Gestational Immunity For Transfer (GIFT) study. Maternal and infant blood, and breast milk samples were collected over the first year of life. All samples were analyzed for IgG and IgA against whole SARS-CoV-2 spike protein, the spike receptor-binding domain (RBD), and previously reported immunodominant epitopes, as well as cytokine levels. The placentae were examined microscopically. The study is registered at clinicaltrials.gov under the identifier NCT04802278. We found high levels of virus-specific IgG in convalescent mothers and similarly elevated titers in newborn children. Thus, antenatal SARS-CoV-2 infection led to high plasma titers of virus-specific antibodies in infants postnatally. However, this waned within 3–6 months of life. Virus neutralization by plasma was not uniformly achieved, and the presence of antibodies targeting known immunodominant epitopes did not assure neutralization. Virus-specific IgA levels were variable among convalescent individuals’ sera and breast milk. Antibody transfer ratios and the decay of transplacentally transferred virus-specific antibodies in neonatal circulation resembled that for other pathogens. Convalescent mothers showed signs of chronic inflammation marked by persistently elevated IL17RA levels in their blood. Four placentae presented signs of acute inflammation, particularly in the subchorionic region, marked by neutrophil infiltration even though > 50 days had elapsed between virus clearance and delivery. Administration of a single dose of BNT162b2 mRNA vaccine to mothers convalescent from antenatal COVID-19 increased virus-specific IgG and IgA titers in breast milk, highlighting the importance of receiving the vaccine even after natural infection with the added benefit of enhanced passive immunity.
- Published
- 2022
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39. cGAS–STING cytosolic DNA sensing pathway is suppressed by JAK2-STAT3 in tumor cells
- Author
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Manuel Adrian Suter, Nikki Y. Tan, Chung Hwee Thiam, Muznah Khatoo, Paul A. MacAry, Veronique Angeli, Stephan Gasser, and Y. L. Zhang
- Subjects
Medicine ,Science - Abstract
Abstract Deficiencies in DNA repair and DNA degrading nucleases lead to accumulation of cytosolic DNA. cGAS is a critical DNA sensor for the detection of cytosolic DNA and subsequent activation of the STING signaling pathway. Here, we show that the cGAS-STING pathway was unresponsive to STING agonists and failed to induce type I interferon (IFN) expression in many tested human tumor cells including DU145 prostate cancer cells. Inhibition of IL-6 or the downstream JAK2/STAT3 signaling restored responsiveness to STING agonists in DU145 cells. STING activity in murine TRAMP-C2 prostate cancer cells was critical for tumor rejection and immune cell infiltration. Endogenous STING agonists including double-stranded DNA and RNA:DNA hybrids present in TRAMP-C2 cells contribute to tumor rejection, but tumor growth was further suppressed by administration of cGAMP. Intratumoral co-injections of IL-6 significantly reduced the anti-tumor effects of cGAMP. In summary, STING in tumor cells contributes to tumor rejection in prostate cancer cells, but its functions are frequently suppressed in tumor cells in part via JAK2 and STAT3 pathways.
- Published
- 2021
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40. Surface ocean microbiota determine cloud precursors
- Author
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Karine Sellegri, Alessia Nicosia, Evelyn Freney, Julia Uitz, Melilotus Thyssen, Gérald Grégori, Anja Engel, Birthe Zäncker, Nils Haëntjens, Sébastien Mas, David Picard, Alexia Saint-Macary, Maija Peltola, Clémence Rose, Jonathan Trueblood, Dominique Lefevre, Barbara D’Anna, Karine Desboeufs, Nicholas Meskhidze, Cécile Guieu, and Cliff S. Law
- Subjects
Medicine ,Science - Abstract
Abstract One pathway by which the oceans influence climate is via the emission of sea spray that may subsequently influence cloud properties. Sea spray emissions are known to be dependent on atmospheric and oceanic physicochemical parameters, but the potential role of ocean biology on sea spray fluxes remains poorly characterized. Here we show a consistent significant relationship between seawater nanophytoplankton cell abundances and sea-spray derived Cloud Condensation Nuclei (CCN) number fluxes, generated using water from three different oceanic regions. This sensitivity of CCN number fluxes to ocean biology is currently unaccounted for in climate models yet our measurements indicate that it influences fluxes by more than one order of magnitude over the range of phytoplankton investigated.
- Published
- 2021
- Full Text
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41. No crossreactivity of anti-SARS-CoV-2 spike protein antibodies with Syncytin-1
- Author
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Prasad, Mukul, Lin, Jia Le, Gu, Yue, Gupta, Rashi, Macary, Paul, and Schwarz, Herbert
- Published
- 2021
- Full Text
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42. Finger stick blood test to assess postvaccination SARS‐CoV‐2 neutralizing antibody response against variants
- Author
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Sing Mei Lim, Hoi Lok Cheng, Huan Jia, Patthara Kongsuphol, Bhuvaneshwari D/O Shunmuganathan, Ming Wei Chen, Say Yong Ng, Xiaohong Gao, Shuvan Prashant Turaga, Sascha P. Heussler, Jyoti Somani, Sharmila Sengupta, Dousabel M. Y. Tay, Megan E. McBee, Barnaby E. Young, Paul A. MacAry, Hadley D. Sikes, and Peter R. Preiser
- Subjects
cellulose pulldown assay ,COVID19 ,humoral response against COVID19 variants ,neutralizing antibody ,point‐of‐care test ,SARS‐CoV‐2 ,Chemical engineering ,TP155-156 ,Biotechnology ,TP248.13-248.65 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Abstract There is clinical need for a quantifiable point‐of‐care (PoC) SARS‐CoV‐2 neutralizing antibody (nAb) test that is adaptable with the pandemic's changing landscape. Here, we present a rapid and semi‐quantitative nAb test that uses finger stick or venous blood to assess the nAb response of vaccinated population against wild‐type (WT), alpha, beta, gamma, and delta variant RBDs. It captures a clinically relevant range of nAb levels, and effectively differentiates prevaccination, post first dose, and post second dose vaccination samples within 10 min. The data observed against alpha, beta, gamma, and delta variants agrees with published results evaluated in established serology tests. Finally, our test revealed a substantial reduction in nAb level for beta, gamma, and delta variants between early BNT162b2 vaccination group (within 3 months) and later vaccination group (post 3 months). This test is highly suited for PoC settings and provides an insightful nAb response in a postvaccinated population.
- Published
- 2022
- Full Text
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43. Blomia tropicalis–Specific TCR Transgenic Th2 Cells Induce Inducible BALT and Severe Asthma in Mice by an IL-4/IL-13–Dependent Mechanism
- Author
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Chua, Yen Leong, Liong, Ka Hang, Huang, Chiung-Hui, Wong, Hok Sum, Zhou, Qian, Ler, Say Siong, Tang, Yafang, Low, Chin Pei, Koh, Hui Yu, Kuo, I-Chun, Zhang, Yongliang, Wong, WS Fred, Peh, Hong Yong, Lim, Hwee Ying, Ge, Moyar Qing, Haczku, Angela, Angeli, Veronique, MacAry, Paul A, Chua, Kaw Yan, and Kemeny, David M
- Subjects
Asthma ,Biotechnology ,Lung ,Aetiology ,2.1 Biological and endogenous factors ,Respiratory ,Acaridae ,Adoptive Transfer ,Allergens ,Animals ,Bronchial Hyperreactivity ,Bronchoalveolar Lavage Fluid ,CD4-Positive T-Lymphocytes ,Disease Models ,Animal ,Immunoglobulin E ,Interleukin-13 ,Interleukin-4 ,Lymph Nodes ,Lymphoid Tissue ,Mice ,Mice ,Transgenic ,Pulmonary Eosinophilia ,Receptors ,Antigen ,T-Cell ,Th2 Cells ,Immunology - Abstract
Previous studies have highlighted the importance of lung-draining lymph nodes in the respiratory allergic immune response, whereas the lung parenchymal immune system has been largely neglected. We describe a new in vivo model of respiratory sensitization to Blomia tropicalis, the principal asthma allergen in the tropics, in which the immune response is focused on the lung parenchyma by transfer of Th2 cells from a novel TCR transgenic mouse, specific for the major B. tropicalis allergen Blo t 5, that targets the lung rather than the draining lymph nodes. Transfer of highly polarized transgenic CD4 effector Th2 cells, termed BT-II, followed by repeated inhalation of Blo t 5 expands these cells in the lung >100-fold, and subsequent Blo t 5 challenge induced decreased body temperature, reduction in movement, and a fall in specific lung compliance unseen in conventional mouse asthma models following a physiological allergen challenge. These mice exhibit lung eosinophilia; smooth muscle cell, collagen, and goblet cell hyperplasia; hyper IgE syndrome; mucus plugging; and extensive inducible BALT. In addition, there is a fall in total lung volume and forced expiratory volume at 100 ms. These pathophysiological changes were substantially reduced and, in some cases, completely abolished by administration of neutralizing mAbs specific for IL-4 and IL-13 on weeks 1, 2, and 3. This IL-4/IL-13-dependent inducible BALT model will be useful for investigating the pathophysiological mechanisms that underlie asthma and the development of more effective drugs for treating severe asthma.
- Published
- 2016
44. Defining the structural basis for human leukocyte antigen reactivity in clinical transplantation
- Author
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Yue Gu, Robynne W. K. Koh, May Ling Lai, Denise Pochinco, Rachel Z. C. Teo, Marieta Chan, Tanusya M. Murali, Chong Wai Liew, Yee Hwa Wong, Nicholas R. J. Gascoigne, Kathryn J. Wood, Julien Lescar, Peter Nickerson, Paul A. MacAry, and Anantharaman Vathsala
- Subjects
Medicine ,Science - Abstract
Abstract The current state-of-the-art technology employed to assess anti-human leukocyte antigen antibodies (Anti-HLA Ab) for donor-recipient matching and patient risk stratification in renal transplantation is the single antigen bead (SAB) assay. However, there are limitations to the SAB assay as it is not quantitative and due to variations in techniques and reagents, there is no standardization across laboratories. In this study, a structurally-defined human monoclonal alloantibody was employed to provide a mechanistic explanation for how fundamental alloantibody biology influences the readout from the SAB assay. Performance of the clinical SAB assay was evaluated by altering Anti-HLA Ab concentration, subclass, and detection reagents. Tests were conducted in parallel by two internationally accredited laboratories using standardized protocols and reagents. We show that alloantibody concentration, subclass, laboratory-specific detection devices, subclass-specific detection reagents all contribute to a significant degree of variation in the readout. We report a significant prozone effect affecting HLA alleles that are bound strongly by the test alloantibody as opposed to those bound weakly and this phenomenon is independent of complement. These data highlight the importance for establishing international standards for SAB assay calibration and have significant implications for our understanding of discordance in previous studies that have analyzed its clinical relevance.
- Published
- 2020
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45. The essential role of pharmacists facilitating vaccination in older adults: the case of Herpes Zoster
- Author
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Casey R. Tak, Macary Weck Marciniak, Amanda Savage, and Sachiko Ozawa
- Subjects
pharmacist ,pharmacy ,vaccine ,immunization ,herpes zoster ,shingles ,elderly ,barriers ,access ,Immunologic diseases. Allergy ,RC581-607 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Older adults share a disproportionately high burden of vaccine-preventable diseases. Despite recommendations from national and international health organizations, vaccination rates among older patients remain suboptimal, suggesting poor access and barriers to vaccination. Pharmacists are uniquely positioned to assist patients in overcoming many of these barriers. In this commentary, we describe some of the common barriers to vaccination that older adults encounter and the role pharmacists have in overcoming these barriers, in the US and abroad. We provide a case study of pharmacists’ impact in supporting herpes zoster vaccination. We also identify areas of opportunities to promote further pharmacist involvement in vaccination efforts.
- Published
- 2020
- Full Text
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46. The trinity of COVID-19: immunity, inflammation and intervention
- Author
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Tay, Matthew Zirui, Poh, Chek Meng, Rénia, Laurent, MacAry, Paul A., and Ng, Lisa F. P.
- Published
- 2020
- Full Text
- View/download PDF
47. A rapid simple point-of-care assay for the detection of SARS-CoV-2 neutralizing antibodies
- Author
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Kongsuphol, Patthara, Jia, Huan, Cheng, Hoi Lok, Gu, Yue, Shunmuganathan, Bhuvaneshwari D/O, Chen, Ming Wei, Lim, Sing Mei, Ng, Say Yong, Tambyah, Paul Ananth, Nasir, Haziq, Gao, Xiaohong, Tay, Dousabel, Kim, Seunghyeon, Gupta, Rashi, Qian, Xinlei, Kozma, Mary M., Purushotorman, Kiren, McBee, Megan E., MacAry, Paul A., Sikes, Hadley D., and Preiser, Peter R.
- Published
- 2021
- Full Text
- View/download PDF
48. cGAS–STING cytosolic DNA sensing pathway is suppressed by JAK2-STAT3 in tumor cells
- Author
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Suter, Manuel Adrian, Tan, Nikki Y., Thiam, Chung Hwee, Khatoo, Muznah, MacAry, Paul A., Angeli, Veronique, Gasser, Stephan, and Zhang, Y. L.
- Published
- 2021
- Full Text
- View/download PDF
49. Surface ocean microbiota determine cloud precursors
- Author
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Sellegri, Karine, Nicosia, Alessia, Freney, Evelyn, Uitz, Julia, Thyssen, Melilotus, Grégori, Gérald, Engel, Anja, Zäncker, Birthe, Haëntjens, Nils, Mas, Sébastien, Picard, David, Saint-Macary, Alexia, Peltola, Maija, Rose, Clémence, Trueblood, Jonathan, Lefevre, Dominique, D’Anna, Barbara, Desboeufs, Karine, Meskhidze, Nicholas, Guieu, Cécile, and Law, Cliff S.
- Published
- 2021
- Full Text
- View/download PDF
50. Oceanic phytoplankton are a potentially important source of benzenoids to the remote marine atmosphere
- Author
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Rocco, Manon, Dunne, Erin, Peltola, Maija, Barr, Neill, Williams, Jonathan, Colomb, Aurélie, Safi, Karl, Saint-Macary, Alexia, Marriner, Andrew, Deppeler, Stacy, Harnwell, James, Law, Cliff, and Sellegri, Karine
- Published
- 2021
- Full Text
- View/download PDF
Catalog
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