1. SARS-CoV-2 Still on the Stage: The Need to Pursue an Integrated Respiratory Virus Surveillance
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Mine Durusu Tanriover, Ayşe Tülay Bağcı Bosi, Lale Ozisik, Fırat Şırvan, Tuğçenur Müderrisoğlu, Oğuz Abdullah Uyaroğlu, Ergin Çiftçi, Halil Özdemir, Belkıs Hatice Inceli, Nilay Penezoglu, Rahmet Güner, Bircan Kayaaslan, Keziban Semiz, Kerem Sarcak, Aslınur Özkaya Parlakay, Belgin Gülhan, Şebnem Erdinç, Metin Özsoy, Ahmet Görkem Er, and Serhat Ünal
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Surveillance ,Respiratory virus ,Influenza ,RSV ,SARS-CoV-2 ,Microbiology ,QR1-502 - Abstract
AIM: To demonstrate the importance of an integrated viral surveillance to tackle the changing epidemiology and the continuing disease burden of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). BACKGROUND: International institutions such as European Centre for Disease Prevention and Control provide guidance for integrated surveillance of respiratory viruses. However, SARS-CoV-2 is not an integral part of sentinel influenza like illness and severe acute respiratory infections surveillance in Türkiye. METHODS: We utilized the database from the Global Influenza Hospital Surveillance Network project in Türkiye between November 1st, 2022 and May 31st, 2024 over two seasons. Patients admitted to five hospitals with influenza like illness symptoms in the last 7 days and stayed overnight in the hospital were screened three days a week and swabbed within 72 hours of admission in a standardized year around surveillance methodology. An oligonucleotide panel analysis was utilized during November 1st 2022 to October 31st 2023 and multiplex PCR was utilized thereafter to test for influenza A and B, SARS-CoV-2 and respiratory syncytial virus (RSV). RESULTS: A total of 984 inpatients were enrolled and 969 of them, 724 (75%) of whom were adults, had valid laboratory results. RSV was the most prevalent pathogen detected in 4.9% of the samples, followed by SARS-CoV-2 (4.8%) and influenza A and B (3%). CONCLUSIONS: SARS-CoV-2 is circulating and resulting in hospital admissions among all age groups adding onto the influenza and RSV peaks. Integrated respiratory virus surveillance is crucial to guide informed public health policies and effective vaccination programs.
- Published
- 2024
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