44 results on '"Maleki, B"'
Search Results
2. Evaluation of miR 26b 5p changes during differentiation of human endometrial stem cells into cardiomyocytes
- Author
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Sadat S, Alani B, Noureddini M, Maleki B, Farrokhian AR, Verdi J, and Ghanbarian H
- Subjects
endometrial mesenchymal stem cells ,cardiomyocyte ,human mirn26a microrna ,cell differentiation ,Medicine (General) ,R5-920 - Abstract
Background: Recently, menstrual blood-derived stem cells as a unique source of stem cells with some features such as ease of access, high ability to proliferate and regenerate, lack of immune system stimulation and no tumorigenesis have raised great hopes for heart disease cell therapy. However, the regulatory mechanisms and role of miRNAs in controlling the differentiation of stem cells into cardiomyocytes are not fully understood. In this study, the level of human miR-26b-5p microRNA were investigated before and after differentiation of endometrial stem cells into heart cardiomyocytes. Materials and Methods: Endometrial mesenchymal stem cells were differentiated into cardiomyocyte-like cells for 30 days in the presence of 5-azacitidine and fibroblast growth factor. Then, using bioinformatics studies, human miR-26b-5p microRNA was selected and its expression pattern was performed during days 0, 6, 12, 18, 24 and 30 of differentiation by Real Time qRT PCR Results: Expression Level of human miR-26b-5p showed an uptrend differentiation between days 0 and 6 and then showed a significant decreasing trend differentiation from day 6 to day 18 and an uptrend again after day 18. Conclusion: The non-uniformity in the expression of hsa-miR-26b-5p microRNA during the 24-day differentiation induction period indicates the existence of different messaging pathways involved in the differentiation process as well as different phases in the evolution and differentiation of cardiomyocytes. The miRNAs involved in the differentiation process and their possible role in turning off and on these messaging pathways at the beginning or end of a phase seems necessary.
- Published
- 2022
3. Comparison of catalysts types performance in the generation of sustainable biodiesel via transesterification of various oil sources: a review study
- Author
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Maleki, B., Ashraf Talesh, S.S., and Mansouri, M.
- Published
- 2022
- Full Text
- View/download PDF
4. An artificial intelligence algorithm to select most viable embryos considering current process in IVF labs.
- Author
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Borna, M-R, Sepehri, MM, Maleki, B, Borna, M-R, Sepehri, MM, and Maleki, B
- Abstract
BACKGROUND: The most common Assisted Reproductive Technology is In-Vitro Fertilization (IVF). During IVF, embryologists commonly perform a morphological assessment to evaluate embryo quality and choose the best embryo for transferring to the uterus. However, embryo selection through morphological assessment is subjective, so various embryologists obtain different conclusions. Furthermore, humans can consider only a limited number of visual parameters resulting in a poor IVF success rate. Artificial intelligence (AI) for embryo selection is objective and can include many parameters, leading to better IVF outcomes. OBJECTIVES: This study sought to use AI to (1) predict pregnancy results based on embryo images, (2) assess using more than one image of the embryo in the prediction of pregnancy but based on the current process in IVF labs, and (3) compare results of AI-Based methods and embryologist experts in predicting pregnancy. METHODS: A data set including 252 Time-lapse Videos of embryos related to IVF performed between 2017 and 2020 was collected. Frames related to 19 ± 1, 43 ± 1, and 67 ± 1 h post-insemination were extracted. Well-Known CNN architectures with transfer learning have been applied to these images. The results have been compared with an algorithm that only uses the final image of embryos. Furthermore, the results have been compared with five experienced embryologists. RESULTS: To predict the pregnancy outcome, we applied five well-known CNN architectures (AlexNet, ResNet18, ResNet34, Inception V3, and DenseNet121). DeepEmbryo, using three images, predicts pregnancy better than the algorithm that only uses one final image. It also can predict pregnancy better than all embryologists. Different well-known architectures can successfully predict pregnancy chances with up to 75.0% accuracy using Transfer Learning. CONCLUSION: We have developed DeepEmbryo, an AI-based tool that uses three static images to predict pregnancy. Additionally, DeepEmbryo uses imag
- Published
- 2024
5. Sperm Selection Using Zona Pellucida-Binding Enhanced Embryo Morphokinetic and Clinical Outcomes in ICSI: A Sibling Oocytes Study.
- Author
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Izadi, M, Khalili, MA, Rezvani, ME, Anbari, F, Maleki, B, Woodward, B, Aflatoonian, B, Izadi, M, Khalili, MA, Rezvani, ME, Anbari, F, Maleki, B, Woodward, B, and Aflatoonian, B
- Abstract
The objective was to investigate the embryo morphokinitics using a time-lapse monitoring (TLM) system and assessment of clinical outcomes following intracytoplasmic sperm injection (ICSI) with zona pellucida (ZP)-bound sperm selection and conventional methods. A total of 371 metaphase II (MII) oocytes from 50 ICSI cycles were studied. Sibling oocytes were randomly divided into control (n = 199) and ZP-bound group (n = 172). All resulting zygotes were cultured and monitored in the TLM system up to Day 3 after ICSI. Fertilization rate, early embryo development, and clinical outcomes were evaluated. No significant differences were found in fertilization rate, time-lapse qualitative and quantitative measures, pronuclear fading time (PNF) t2, t3, t4, t5, t6, and t7 (times of cleavage to 2, 3, 4, 5, 6, and 7 cells), respectively. However, the t8 (time of cleavage to eight cells) and cc3 (duration of third cell cycle) revealed a significant difference between control and ZP-bound groups (p < .05). A significant difference between the two groups (p < .05) in the rates of Grade A embryos (according to Basile algorithm), chemical pregnancy, clinical pregnancy, and implantation was observed. Sperm selection using biological materials, such as ZP, improved both embryo quality and pregnancy outcomes, despite not affecting the early embryo development and morphokinetic parameters up to t8. This prospective randomized sibling oocyte trial was registered in October 2020 to January 2022 (IRCT20200705048021N1).
- Published
- 2024
6. Dendrimer templated ionic liquid nanomagnetic for efficient coupling reactions.
- Author
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Peiman S, Maleki B, and Ghani M
- Abstract
In this research, a logical strategy with a recyclable synthetic perspective of view and a rational design to prepare a nanocatalyst with a dendrimer template containing ionic liquid is presented. Magnetic silica nanoparticles were prepared using the Stober method. Their surface was modified with the help of cyanuric chloride, melamine, and 1-methylimidazole as Linkers. Finally, the nanocatalyst was decorated with affordable copper metal. The dendrimer-templated nanocatalyst was identified by different analyses, such as FT-IR, SEM, TEM, XRD, EDX, TGA, CHN, and ICP-OES. Fe
3 O4 @SiO2 @NTMP-IL-Cu was used as a heterogeneous nanocatalyst with good performance and reusable in coupling syntheses. The synthesis of A3 -coupling and Ullmann coupling was performed under solvent-free and THF conditions, respectively, with high yields. Reusability and high efficiency of products in the vicinity of this catalyst, the use of cheap and available metal are desirable features of this synthetic catalyst., (© 2024. The Author(s).)- Published
- 2024
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7. A vitamin C-based natural deep eutectic solvent for the synthesis of 2,3-dihydroquinazolin-4(1H)-one derivatives.
- Author
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Hosseinzadeh R, Zarei S, Valipour Z, and Maleki B
- Abstract
Efficient and green protocols were reported to synthesize 2,3-dihydroquinazolin-4(1H)-one derivatives in natural deep eutectic solvent (NADES). NADES was prepared from ascorbic acid (AA) and choline chloride (ChCl) with reduced or null toxicity, biocompatibility, and low cost. The ChCl/AA NADES was successfully used in the synthesis of 2,3-dihydroquinazolin-4(1H)-one derivatives via the condensation reaction of aldehydes with 2-aminobenzamide and the three-component reactions of aldehydes, isatoic anhydrides and ammonium salts under solvent-free conditions. The scope of this method was evaluated by employing various aromatic, heterocyclic, and aliphatic aldehydes. The desired products were achieved in 85-97 % yield in a short reaction time. Also, the deep eutectic solvent ChCl/AA showed good recyclability and reusability., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2024 The Authors.)
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- 2024
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8. Fe 3 O 4 @gC 3 N 4 @Thiamine: a novel heterogeneous catalyst for the synthesis of heterocyclic compounds and microextraction of tebuconazole in food samples.
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Peiman S, Maleki B, and Ghani M
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- Catalysis, Food Contamination analysis, Food Analysis methods, Heterocyclic Compounds chemistry, Heterocyclic Compounds chemical synthesis, Nitrogen Compounds chemistry, Solid Phase Microextraction methods, Carbon Compounds, Inorganic chemistry, Triazoles chemistry, Triazoles analysis, Graphite chemistry, Thiamine chemistry, Thiamine analysis
- Abstract
Graphite carbon nitride (g-C
3 N4 ) is a two-dimensional nano-sheet with electronic properties, which shows unique characteristics with high chemical and thermal stability in its structure. The functionalization of these compounds through covalent bonding is an important step towards significantly improving their properties and capabilities. To achieve this goal, a novel strategy for the covalent functionalization of Fe3 O4 @g-C3 N4 with thiamine hydrochloride (vitamin B1) via cyanuric chloride (TCT), which is a divalent covalent linker, was presented. The efficiency of Fe3 O4 @gC3 N4 @Thiamine as a heterogeneous organic catalyst in the synthesis of spirooxindole-pyran derivatives and 2-amino-4H-pyran under solvent-free conditions was evaluated and the yields of high-purity products were presented. In addition, easy recycling and reuse for seven consecutive cycles without significant reduction in catalytic activity are other features of this catalyst. Moreover, the performance of the prepared sorbent in the microextraction technique (herein, magnetic solid phase extraction) was studied. The tebuconazole was selected as the target analyte. The target analyte was extracted and determined by HPLC-UV. Under the optimum condition, the linear range of the method (LDR) was estimated in the range of 0.2-100 μg L-1 (the coefficient of determination of 0.9962 for tebuconazole). The detection limit (LOD) of the method for tebuconazole was calculated to be 0.05 µg L-1 . The limit of quantification (LOQ) of the method was also estimated to be 0.16 µg L-1 . In order to check the precision of the proposed method, the intra-day and inter-day relative standard deviations (RSD%) were calculated, which were in the range of 1.5- 2.8%. The method was used for the successful extraction and determination of tebuconazole in tomato, cucumber, and carrot samples., (© 2024. The Author(s).)- Published
- 2024
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9. A modified U-Net to detect real sperms in videos of human sperm cell.
- Author
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Saadat H, Sepehri MM, Borna MR, and Maleki B
- Abstract
Background: This study delves into the crucial domain of sperm segmentation, a pivotal component of male infertility diagnosis. It explores the efficacy of diverse architectural configurations coupled with various encoders, leveraging frames from the VISEM dataset for evaluation., Methods: The pursuit of automated sperm segmentation led to the examination of multiple deep learning architectures, each paired with distinct encoders. Extensive experimentation was conducted on the VISEM dataset to assess their performance., Results: Our study evaluated various deep learning architectures with different encoders for sperm segmentation using the VISEM dataset. While each model configuration exhibited distinct strengths and weaknesses, UNet++ with ResNet34 emerged as a top-performing model, demonstrating exceptional accuracy in distinguishing sperm cells from non-sperm cells. However, challenges persist in accurately identifying closely adjacent sperm cells. These findings provide valuable insights for improving automated sperm segmentation in male infertility diagnosis., Discussion: The study underscores the significance of selecting appropriate model combinations based on specific diagnostic requirements. It also highlights the challenges related to distinguishing closely adjacent sperm cells., Conclusion: This research advances the field of automated sperm segmentation for male infertility diagnosis, showcasing the potential of deep learning techniques. Future work should aim to enhance accuracy in scenarios involving close proximity between sperm cells, ultimately improving clinical sperm analysis., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The reviewer BH-V declared a shared affiliation with the authors HS, MS, and M-RB to the handling editor at the time of review., (Copyright © 2024 Saadat, Sepehri, Borna and Maleki.)
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- 2024
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10. Fe 3 O 4 @SiO 2 @NTMPThio-Cu: a sustainable and eco-friendly approach for the synthesis of heterocycle derivatives using a novel dendrimer template nanocatalyst.
- Author
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Peiman S and Maleki B
- Abstract
In this research, Fe
3 O4 @SiO2 @NTMPThio-Cu was introduced as a novel and green heterogeneous nanocatalyst with a dendrimer template that is environmentally friendly and reusable based on Fe3 O4 @SiO2 . In this way, magnetic silica nanoparticles were first modified with cyanuric chloride, followed by melamine and thiosemicarbazide, and ultimately, it's decorated with the cost-effective metal copper. The synthesized nanocatalyst was characterized by various analyses such as FT-IR, XRD, SEM, TGA, and EDX. The efficiency of Fe3 O4 @SiO2 @NTMPThio-Cu was measured in one-pot synthesis of xanthene and spirooxindole-pyran derivatives under mild solvent-free conditions. High efficiency, excellent yield of products, mild reaction conditions, simple operation, no use of toxic organic solvents, and reusability of this catalyst increase the attractiveness of this technique for large-scale environmentally friendly operations., (© 2024. The Author(s).)- Published
- 2024
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11. Exploring the Potential of In vitro Maturation (IVM) of Oocytes: Indications, Applications, and Treatment Protocols.
- Author
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Torkashvand H, Shabani R, Amiri I, Darakhshan R, Maleki B, Doostabadi MR, and Mehdizadeh M
- Abstract
This review addresses the current understanding of In Vitro Maturation (IVM) treatment, including indications and effective treatment protocols influencing oocyte developmental competence. A comprehensive literature search was performed to gather relevant studies, clinical trials, and reviews related to IVM. Databases such as PubMed, MEDLINE, and pertinent medical journals were searched. The selected literature was analyzed and synthesized to offer a comprehensive overview. IVM has emerged as a promising technique for inducing maturation in immature oocytes across various developmental stages. Its applications extend to areas utilizing In Vitro Fertilization (IVF), gaining traction as a treatment option for Polycystic Ovary Syndrome (PCOS) and fertility preservation in cancer patients. Recent advancements have led to improved global pregnancy rates, resulting in successful births. IVM also holds potential in reducing risks associated with conventional IVF, including ovarian hyperstimulation syndrome and multiple pregnancies. Despite these advantages, IVM adoption in clinical practice remains limited. Ongoing research aims to refine therapeutic protocols and expand clinical indications. IVM holds promise in assisted reproductive technology, spanning applications from cancer patient fertility preservation to addressing PCOS. Enhanced pregnancy rates highlight efficacy, while risk reduction compared to IVF underscores its importance. Further research is needed for optimal use across patient groups, emphasizing protocol refinement and expanded applications., (Copyright© 2024 Avicenna Research Institute.)
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- 2024
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12. An artificial intelligence algorithm to select most viable embryos considering current process in IVF labs.
- Author
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Borna MR, Sepehri MM, and Maleki B
- Abstract
Background: The most common Assisted Reproductive Technology is In-Vitro Fertilization (IVF). During IVF, embryologists commonly perform a morphological assessment to evaluate embryo quality and choose the best embryo for transferring to the uterus. However, embryo selection through morphological assessment is subjective, so various embryologists obtain different conclusions. Furthermore, humans can consider only a limited number of visual parameters resulting in a poor IVF success rate. Artificial intelligence (AI) for embryo selection is objective and can include many parameters, leading to better IVF outcomes., Objectives: This study sought to use AI to (1) predict pregnancy results based on embryo images, (2) assess using more than one image of the embryo in the prediction of pregnancy but based on the current process in IVF labs, and (3) compare results of AI-Based methods and embryologist experts in predicting pregnancy., Methods: A data set including 252 Time-lapse Videos of embryos related to IVF performed between 2017 and 2020 was collected. Frames related to 19 ± 1, 43 ± 1, and 67 ± 1 h post-insemination were extracted. Well-Known CNN architectures with transfer learning have been applied to these images. The results have been compared with an algorithm that only uses the final image of embryos. Furthermore, the results have been compared with five experienced embryologists., Results: To predict the pregnancy outcome, we applied five well-known CNN architectures (AlexNet, ResNet18, ResNet34, Inception V3, and DenseNet121). DeepEmbryo, using three images, predicts pregnancy better than the algorithm that only uses one final image. It also can predict pregnancy better than all embryologists. Different well-known architectures can successfully predict pregnancy chances with up to 75.0% accuracy using Transfer Learning., Conclusion: We have developed DeepEmbryo, an AI-based tool that uses three static images to predict pregnancy. Additionally, DeepEmbryo uses images that can be obtained in the current IVF process in almost all IVF labs. AI-based tools have great potential for predicting pregnancy and can be used as a proper tool in the future., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2024 Borna, Sepehri and Maleki.)
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- 2024
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13. Ephedra intermedia Schrenk & C. A. Mey Methanol Extract: Nanoencapsulation by Mini-Emulsion Polymerization and its Release Trend under Simulated Conditions of the Human Body.
- Author
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Mahdavi B, Ebrahimi S, Farzi GA, Maleki B, and Mohammadhosseini M
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- Humans, Particle Size, Methanol chemistry, Nanoparticles chemistry, Drug Liberation, Plant Extracts chemistry, Plant Extracts isolation & purification, Emulsions chemistry, Polymerization, Ephedra chemistry
- Abstract
In this research, the extract of Ephedra intermedia Schrenk & C.A.Mey. was encapsulated using the mini-emulsion polymerization method based on methyl methacrylate polymers with a nanometer size. The encapsulated extract was characterized using different analytical techniques. Furthermore, the loading efficiency and release of the plant extract were examined. FT-IR spectroscopy confirmed the formation of an expectational product. The TEM and SEM imaging showed a spherical morphology for the prepared encapsulated extract. The average size of poly-methyl-methacrylate nanoparticles containing Ephedra extract was found to be approximately 47 nm. The extract loading efficiency and encapsulation efficiency test demonstrated a dose-depending behavior on E. intermedia extract for both analyses, which is highly advantageous for traversing biological barriers. The release assay shows a controlled release for the extract at phosphate buffer solution (PBS). A 38 % release was calculated after 36 hours. The results obtained from the present study reveal that encapsulating the plant extract is a suitable alternative to control and increase their medicinal properties., (© 2024 Wiley-VHCA AG, Zurich, Switzerland.)
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- 2024
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14. Zeolite 13X incorporated with Zn-Ce oxide nanocatalyst for removal of Reactive Red 120 dye: RSM-based approach.
- Author
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Yarnazari T, Maleki B, Mansouri M, and Esmaeili H
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- Hydrogen Peroxide, Reproducibility of Results, Environmental Monitoring, Zinc, Oxides, Zeolites, Triazines
- Abstract
In this study, the photocatalytic removal of Reactive Red 120 (RR120) dye was examined using zeolite 13X incorporated with Zn-Ce under UV irradiation. The synthesis of Zn-Ce nanoparticles incorporated with zeolite 13X was conducted through the co-precipitation method, and the features of the prepared nanocatalyst were analyzed using various techniques. The SEM and BET analyses indicated successful incorporation of ZnO-Ce oxides on the surface of zeolite 13X and a specific surface area of 359.39 m
2 /gm, respectively. Further, the average size of crystal grains was 28 nm. The response surface methodology (RSM) approach was employed to optimize operating parameters. The quadratic model suggested by the RSM approach, characterized by a high regression coefficient (R2 = 0.9632), indicates a high level of reliability. Moreover, under optimal conditions (catalyst loading of 4 mg, pH of 3, H2 O2 amount of 0.2 mL, UV power of 25 W, and reaction time of 60 min), the highest RR120 dye removal percentage was 99.97%. Kinetic data indicated an increase in the reaction rate constant from 0.0631 to 0.1796 min-1 . The zeolite 13X incorporated with Zn-Ce photocatalyst exhibited excellent stability over 5 cycles, with only a 5.50% decrease in RR120 dye removal yield. This study demonstrates the promising potential of zeolite 13X incorporated with Zn-Ce nanoparticles for the removal of RR120 dye from aqueous suspension., (© 2024. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)- Published
- 2024
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15. Metabolic and endocrine changes induced by cinnamon in women with polycystic ovarian syndrome: A pilot study.
- Author
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Peivandi S, Heydari-Latibari S, Ghasemzadeh F, Zamaniyan M, Bahar A, Majidi H, and Maleki B
- Abstract
Objective: Most polycystic ovary syndrome (PCOS) patients have metabolic abnormalities in which insulin resistance (IR) plays a pivotal role. Cinnamon is a herbal medicine with insulinotropic properties. This pilot study aimed to evaluate the effects of cinnamon on ovarian volume, androgenic profile, and metabolic and anthropometric parameters in women with PCOS., Materials and Methods: A single-center, double-blind, randomized, placebo-controlled trial was carried out on 39 overweight / obese women with PCOS. For six months, subjects in the cinnamon (500 mg) (n=19) and placebo (n=20) groups were given three capsules daily. Before and after the intervention, the variables were assessed. The data was analyzed using the GraphPad Prism software., Results: After the intervention, the two intervention and control groups had significant differences in abdominal subcutaneous fat and ovarian volume, but they did not differ significantly in terms of body mass index (BMI). Also, after the intervention, no significant difference was observed between the two groups in terms of lipid profile and the concentration of androgenic biomarkers of insulin resistance., Conclusion: Cinnamon supplementation improves ovarian volume and subcutaneous abdominal fat but has no effect on anthropometric parameters, lipid profile, insulin resistance, or androgen hormones., Competing Interests: The authors have declared that there is no conflict of interest.
- Published
- 2024
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16. Author Correction: Identification of ITPR1 gene as a novel target for hsa-miR-34b-5p in non-obstructive azoospermia: a Ca 2+ /apoptosis pathway cross-talk.
- Author
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Maleki B, Modarres P, Salehi P, and Vallian S
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- 2024
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17. Sperm Selection Using Zona Pellucida-Binding Enhanced Embryo Morphokinetic and Clinical Outcomes in ICSI: A Sibling Oocytes Study.
- Author
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Izadi M, Khalili MA, Rezvani ME, Anbari F, Maleki B, Woodward B, and Aflatoonian B
- Subjects
- Pregnancy, Female, Male, Humans, Prospective Studies, Semen, Oocytes, Spermatozoa, Zona Pellucida, Sperm Injections, Intracytoplasmic methods
- Abstract
The objective was to investigate the embryo morphokinitics using a time-lapse monitoring (TLM) system and assessment of clinical outcomes following intracytoplasmic sperm injection (ICSI) with zona pellucida (ZP)-bound sperm selection and conventional methods. A total of 371 metaphase II (MII) oocytes from 50 ICSI cycles were studied. Sibling oocytes were randomly divided into control ( n = 199) and ZP-bound group ( n = 172). All resulting zygotes were cultured and monitored in the TLM system up to Day 3 after ICSI. Fertilization rate, early embryo development, and clinical outcomes were evaluated. No significant differences were found in fertilization rate, time-lapse qualitative and quantitative measures, pronuclear fading time (PNF) t2, t3, t4, t5, t6, and t7 (times of cleavage to 2, 3, 4, 5, 6, and 7 cells), respectively. However, the t8 (time of cleavage to eight cells) and cc3 (duration of third cell cycle) revealed a significant difference between control and ZP-bound groups ( p < .05). A significant difference between the two groups ( p < .05) in the rates of Grade A embryos (according to Basile algorithm), chemical pregnancy, clinical pregnancy, and implantation was observed. Sperm selection using biological materials, such as ZP, improved both embryo quality and pregnancy outcomes, despite not affecting the early embryo development and morphokinetic parameters up to t8. This prospective randomized sibling oocyte trial was registered in October 2020 to January 2022 (IRCT20200705048021N1)., Competing Interests: Declaration of Conflicting InterestsThe author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
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- 2024
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18. Retraction notice to "Low-to-moderate intensity aerobic exercise training modulates irritable bowel syndrome through antioxidative and inflammatory mechanisms in women: Results of a randomized controlled trial" [Cytokine 102 (2018) 18-25].
- Author
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Hajizadeh Maleki B, Tartibian B, Mooren FC, FitzGerald LZ, Krüger K, Chehrazi M, and Malandish A
- Published
- 2024
- Full Text
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19. Identification of ITPR1 gene as a novel target for hsa-miR-34b-5p in non-obstructive azoospermia: a Ca 2+ /apoptosis pathway cross-talk.
- Author
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Maleki B, Modarres P, Salehi P, and Vallian S
- Subjects
- Male, Humans, Biomarkers, Apoptosis genetics, Inositol 1,4,5-Trisphosphate Receptors genetics, Azoospermia genetics, MicroRNAs genetics
- Abstract
MiR-34b-5p has been reported as a non-invasive diagnostic biomarker for infertility. However, no gene targets regulating the mechanism of cation of this miRNA are known. In this study, using gene set enrichment analysis the Inositol 1,4,5-Trisphosphate Receptor Type 1 (ITPR1) gene was identified as the sole target for hsa-miR-34b-5p, and found significantly overexpressed in non-obstructive azoospermia (NOA) patients. This finding was confirmed by qRT-PCR on fresh testicular tissues from NOA patients. Then, pathway enrichment analysis as well as the diagnostic value analysis of hsa-miR-34b-5p/ITPR1 indicated ITPR1 as a hub gene in the calcium (Ca
2+ )-apoptosis pathway, and a valuable predictive biomarker for NOA. Moreover, gene expression and histological assays showed the association of the effects of ITPR1's increased expression on spermatogenesis failure through induction of apoptosis in NOA patients. These data suggested that the hsa-miR-34b-5p/ITPR1 axis could serve as a potential regulatory predictive biomarker for human spermatogenesis through the Ca2+ -apoptosis pathway cross-talk., (© 2023. The Author(s).)- Published
- 2023
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20. Captopril supported on magnetic graphene nitride, a sustainable and green catalyst for one-pot multicomponent synthesis of 2-amino-4H-chromene and 1,2,3,6-tetrahydropyrimidine.
- Author
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Rezaei F, Alinezhad H, and Maleki B
- Abstract
Captopril (CAP) is a safe, cost-effective, and environmentally organic compound that can be used as an effective organo-catalyst. Functional groups of captopril make it capable to attach to solid support and acting as promoters in organic transformations. In this work, captopril was attached to the surface of magnetic graphene nitride by employing a linker agent. The synthesized composite efficiently catalyzed two multicomponent reactions including the synthesis of 1,2,3,6-tetrahydropyrimidine and 2-amino-4H-chromene derivatives. A large library of functional targeted products was synthesized in mild reaction conditions. More importantly, this catalyst was stable and magnetically recycled and reused for at least five runs without losing catalytic activity., (© 2023. The Author(s).)
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- 2023
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21. Enhanced photocatalytic performance of milkvetch-derived biochar via ZnO-Ce nanoparticle decoration for reactive blue 19 dye removal.
- Author
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Jahani F, Maleki B, Mansouri M, Noorimotlagh Z, and Mirzaee SA
- Abstract
In this research, the photocatalytic removal of reactive blue 19 (RB19) dye is investigated employing zinc oxide/cerium (ZnO@Ce) nanoparticles decorated with biochar under LED irradiation. Synthesis of ZnO@Ce nanoparticles decorated with biochar was performed utilizing the co-precipitation procedure and, then, the texture and morphology of the fabricated nanocomposite were analyzed using energy dispersive X-ray (EDX), field emission scanning electron microscopy (FE-SEM), X-ray powder diffraction (XRD), transmission electron microscopy (TEM), Brunauer-Emmett-Teller (BET), and Fourier transform infrared (FTIR) spectroscopy techniques. Moreover, FE-SEM images demonstrate that ZnO-Ce nanoparticles were successfully decorated on the surface of biochar. The specific surface areas of biochar and biochar/ZnO-Ce were 519.75 and 636.52 m
2 /g, respectively. To achieve the maximum yield in the removal of RB19 dye, the effects of operating variables including dye concentration, LED lamp power, biochar@ZnO-Ce catalyst dose, pH and H2 O2 dose were explored. Besides, the maximum percentage of RB19 dye removal was 96.47% under optimal conditions, i.e. catalyst dosage of 100 mg, H2 O2 dosage of 1 mL, pH of 9, initial dye concentration of 5 ppm, LED power of 50 W, and reaction time of 140 min. Furthermore, the kinetic analysis reveals that the removal of RB19 dye follows the pseudo-first order kinetic model, with calculated values of a reaction rate constant of 0.045 min-1 and a correlation coefficient of R2 = 0.99, respectively. Moreover, the reusability and recyclability of biochar@ZnO/Ce nanocatalyst was promising over five runs, with only a 6.08% decrease in RB19 dye removal efficiency. Therefore, it can be concluded that the biochar @ZnO/Ce photocatalyst can be promisingly applied for the removal of azo dyes in aqueous solutions., (© 2023. Springer Nature Limited.)- Published
- 2023
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22. Quality of testicular spermatozoa improves with changes in composition of culture medium.
- Author
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Gholizadeh L, Khalili MA, Maleki B, Vahidi S, and Agha-Rahimi A
- Abstract
Background: Spermatozoa retrieved from the testis and epididymis are deprived of the beneficial effects of seminal fluid. Thus applying an artificial medium with normal seminal fluid characteristics, known as artificial seminal fluid (ASF), may provide an appropriate condition for improving some sperm parameters in azoospermia. The objective was to investigate the impact of in vitro exposure of testicular and epididymal spermatozoa to ASF on sperm quality. The study was conducted on testicular (n = 20) and epididymal (n = 20) sperm specimens obtained from azoospermic men. Each sample was divided into two equal parts: Part I) for processing and incubation with Ham's F10 medium; Part II) for processing and incubation with ASF., Results: After 2 h incubation, testicular sperm motility was significantly higher in ASF than in Ham's F10 medium. In comparison to 0 h, mitochondrial membrane potential levels of testicular spermatozoa were significantly higher after 2 h and 24 h in ASF and after 24 h in Ham's F10 medium. Furthermore, the data indicated significantly lower rates of epididymal spermatozoa with high MMP in both media after 24 h. There were no significant differences in the DNA fragmentation index of testicular and epididymal spermatozoa between ASF and Ham's F10 medium at different time points., Conclusion: The results demonstrated that in vitro incubation of testicular spermatozoa improved their motility more effectively than Ham's F10 medium in the short term (2 h), but had no effect on epididymal spermatozoa. Since the physiology of testicular spermatozoa is different from that of ejaculated spermatozoa, it seems that a special environment should be designed and used for each of them., (© 2023. The Author(s).)
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- 2023
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23. A strategy for As(III) determination based on ultrafine gold nanoparticles decorated on magnetic graphene oxide.
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Liu H, Baghayeri M, Amiri A, Karimabadi F, Nodehi M, Fayazi M, Maleki B, Zare EN, and Kaffash A
- Subjects
- Humans, Reproducibility of Results, Magnetic Phenomena, Gold chemistry, Metal Nanoparticles chemistry
- Abstract
In this work, a new dendrimer modified magnetic graphene oxide (GO) was used as a substrate for electrodeposition of Au nanoparticles. The modified magnetic electrode was employed for sensitive measuring of As(III) ion as a well-established human carcinogen. The prepared electrochemical device exhibits excellent activity towards As(III) detection using the square wave anodic stripping voltammetry (SWASV) protocol. At optimum conditions (deposition potential at -0.5 V for 100 s in 0.1 M acetate buffer with pH 5.0), a linear range from 1.0 to 125.0 μgL
-1 with a low detection limit (calculated by S/N = 3) of 0.47 μg L-1 was obtained. In addition to the simplicity and sensitivity of the proposed sensor, its high selectivity against some major interfering agents, such as Cu(II) and Hg(II) makes it an appreciable sensing tool for the screening of As(III). In addition, the sensor revealed satisfactory results for detection of As(III) in different water samples, and the accuracy of obtained data were confirmed by inductively coupled plasma atomic emission spectroscopy (ICP-AES) setup. Accounting for the high sensitivity, remarkable selectivity and good reproducibility, the established electrochemical strategy has great potential for analysis of As(III) in environmental matrices., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Inc. All rights reserved.)- Published
- 2023
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24. SPaM: soft patch matching for non-rigid pointcloud registration.
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Maleki B, Falque R, Vidal-Calleja T, and Alempijevic A
- Abstract
3d reconstruction of deformable objects in dynamic scenes forms the fundamental basis of many robotic applications. Existing mesh-based approaches compromise registration accuracy, and lose important details due to interpolation and smoothing. Additionally, existing non-rigid registration techniques struggle with unindexed points and disconnected manifolds. We propose a novel non-rigid registration framework for raw, unstructured, deformable point clouds purely based on geometric features. The global non-rigid deformation of an object is formulated as an aggregation of locally rigid transformations. The concept of locality is embodied in soft patches described by geometrical properties based on SHOT descriptor and its neighborhood. By considering the confidence score of pairwise association between soft patches of two scans (not necessarily consecutive), a computed similarity matrix serves as the seed to grow a correspondence graph which leverages rigidity terms defined in As-Rigid-As-Possible for pruning and optimization. Experiments on simulated and publicly available datasets demonstrate the capability of the proposed approach to cope with large deformations blended with numerous missing parts in the scan process., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Maleki, Falque, Vidal-Calleja and Alempijevic.)
- Published
- 2023
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25. Ischemia and vasculogenesis after transplantation of frozen and vitrified human ovarian tissue onto Chick Embryo Chorioallantoic Membrane (CAM).
- Author
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Vatanparast M, Maleki B, and Khalili MA
- Subjects
- Female, Animals, Humans, Chick Embryo, Freezing, Ovary, Vitrification, Ischemia, Chorioallantoic Membrane, Cryopreservation methods
- Abstract
Objectives: The first days of post-ovarian transplantation are critical periods, as the ischemic injury can diminish the success rate. In this study, the first day's events of ovarian transplantation in two dimensions of structure and ultrastructure following slow freezing and vitrification were assessed., Study Design: Ovarian tissues (OTs) from 10 cancerous patients were frozen in two methods of slow freezing and vitrification. Tissues were transplanted onto the CAM and then retrieved at 5 and 10 days of culture. Nine groups were assigned as follows; I-III; fresh, 5 and 10 days culture, IV-VI; vitrification, 5 and 10 days culture, and VII-IX; slow freezing, 5 and 10 days culture. Structural and ultra-structural studies were done to assess the tissue viability and integrity following CAM transplantation. Image J software was used to measure the amounts of fibrosis and necrosis., Results: The first sign of successful transplantation was found on day 3 post-transplantation. Vitrified tissues showed higher viability and transplantation rate compared to the slow frozen group (65% vs 57.5%) (p = 0.7). Tissue fibrosis and areas didn't increase significantly after cryopreservation using two methods (p > 0.05). The areas of fibrosis and necrosis and avian vessels increased significantly after 5 and 10 days of culture (p < 0.05). Large ultra-structural follicular deformities were noticed after 10 days of CAM transplantation. Better stromal ultrastructure features can be found after vitrified tissue culture. Also, the CAM transplantation technique had negative effects on the integrity of follicles, independent of the freezing procedure., Conclusion: Evaluation of early events of the ovarian post-transplantation is of amount importance, since the hypoxia during this period may accelerate follicular pool depletion, before the tissue stability. Vitrification can be considered a reliable alternative for slow freezing. CAM transplantation is a good technique for confirmation of tissue viability after warming but damaged the follicle ultrastructure in a short period., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
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26. Synthesis, band gap structure and third order non-linear optical properties of zinc tungsten oxide nanocomposite using a single CW laser beam.
- Author
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Jalili Z, Koushki E, Ehsanian AH, Tayebee R, and Maleki B
- Abstract
In this study, a composite of zinc tungsten oxide nanoparticles (W-ZnO NPs) has been synthesized via mixing Na
2 WO4 and zinc acetate in water, followed by dropwise addition of NaOH. The synthesized W-ZnO NPs were characterized using measurement methods such as XRD, dynamic light scattering (DLS), Scanning electron microscopy (SEM) and UV-Vis. Also, the results were compared with the pure synthesized ZnO and WO3 NPs. Non-linear optical properties of the synthesized composite were measured using the Z-scan technique with a continuous wave Nd-Yag laser. The negative non-linear absorption coefficient of the components was obtained which indicates that the saturation absorption occurred in this composite. In comparison with pure ZnO NPs, non-linear absorption decreases which can be attributed to the negligible optical response of WO3 structures. Also, the negative value of the close aperture Z-scan curve shows that the thermal lensing effect is the main reason for the third-order non-linear refraction., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Jalili, Koushki, Ehsanian, Tayebee and Maleki.)- Published
- 2023
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27. Effect of miR-18a-5p, miR-19a-3p, and miR-20a-5p on In Vitro Cardiomyocyte Differentiation of Human Endometrium Tissue-Derived Stem Cells Through Regulation of Smad4 Expression.
- Author
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Maleki B, Noureddini M, Saadat S, Verdi J, Farrokhian A, Ghanbarian H, Cheraghi E, and Alani B
- Abstract
Background: Smad4 regulates the expression of the genes required for heart homeostasis. Regarding the central role of microRNAs in cardiac biology, we investigated the expression of the three Smad4-targeting miRNAs, namely miR-18a-5p, miR-19a-3p, and miR-20a-5p, as well as Smad4 during differentiation of human endometrium-derived mesenchymal stem cells (hEMSCs) into cardiomyocytes (CMs)., Methods: To evaluate mesenchymal phenotype and multi-lineage differentiation ability of hEMSCs, immunophenotyping by flow cytometry and differentiation into osteoblasts and adipocytes were performed, respectively. For transdifferentiation into CMs, hEMSCs were exposed to a cardiomyogenic medium composed of 5-aza and bFGF for 30 days. The comparison between transcriptional expression levels of Nkx2-5, GATA4, Smad4, TNNT2, TBX5, miR-18a-5p, miR-19a-3p, and miR-20a-5p by qRT-PCR, as well as protein levels of Nkx2-5, Smad4, and cTnT by immunofluorescence staining, was conducted in every 6 days., Results: In vitro , the mesenchymal stem cell phenotype of hEMSCs and their potency for differentiation into other MSCs were confirmed. Differentiated hEMSCs had morphological characteristics of CMs. The percentage of positive cells for Nkx2-5, Smad4, and cTnT proteins was increased following induction and culminated on the 24th day. Also, mRNA levels of Nkx2-5, GATA4, Smad4, TNNT2, and TBX5 exhibited the same trend. The expression of investigated miRNAs was significantly decreased sequentially. A significant negative correlation between expressions of Smad4 and investigated miRNAs was observed., Conclusion: Our results indicate that miR-18a-5p, miR-19a-3p, and miR-20a-5p are involved in the cardiac differentiation propensity of hEMSCs potentially by regulation of Smad levels. Although, more mechanistic experiments are required to confirm this idea., Competing Interests: None.
- Published
- 2023
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28. Mn(III) Schiff base complexes containing crown ether rings immobilized onto MCM-41 matrix as heterogeneous catalysts for oxidation of alkenes.
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Maleki B, Sandaroos R, and Peiman S
- Abstract
Six catalysts MnL
1 -MnL6 , containing two crown ether rings and their analogs supported on the MCM-41 heterogeneous substrate (MnL1 @MCM41-MnL5 @MCM41) were synthesized and characterized. A mixture of molecular oxygen, as an oxidant, and these catalysts were used for the epoxidation of styrene. As a general result, the supported catalysts showed better performance compared with the unsupported analogs. On the other hand, the supported species, in addition to recyclability, did not require an axial base and reducing agent., Competing Interests: The authors declare no conflict of interest., (© 2023 The Authors.)- Published
- 2023
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29. Magnetic solid-phase extraction of warfarin and gemfibrozil in biological samples using polydopamine-coated magnetic nanoparticles via core-shell nanostructure.
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Ghani M, Jafari Z, Maleki B, and Chamani M
- Subjects
- Warfarin, Solid Phase Extraction methods, Chromatography, High Pressure Liquid, Magnetic Phenomena, Gemfibrozil, Magnetite Nanoparticles chemistry
- Abstract
Herein, polydopamine-coated Fe
3 O4 spheres were synthesized using a very simple, easy, cost-effective, efficient, and fast method. First, magnetic nanoparticles (Fe3 O4 ) were synthesized and were followed by accommodating polydopamine on the surface of the prepared Fe3 O4 . The prepared polydopamine-coated Fe3 O4 spheres were utilized as a sorbent in magnetic solid phase extraction of gemfibrozil and warfarin (as the model analytes). The extracted model analytes were desorbed by a suitable organic solvent and were analyzed by high-performance liquid chromatography. Under optimized condition, the linearity of the method was in the range of 0.1-200.0 μg/L for the selected analytes in water. The limits of detection were calculated to be in the range of 0.026-0.055 μg/L for warfarin and gemfibrozil, respectively. The limits of quantification were calculated to be in the range of 0.089-0.185 μg/L. The inter-day and intra-day relative standard deviations were determined to be in the range of 1.4%-3.3% in three concentrations in order to calculate the method precision. Furthermore, the enrichment factors were found to be 78 and 81 for warfarin and gemfibrozil, respectively. Moreover, the calculated absolute recoveries were between 78% and 81%. The obtained recoveries indicated that the method was useful and applicable in complicated real samples., (© 2022 Wiley-VCH GmbH.)- Published
- 2023
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30. Notable Enhancement of Facial Scarring Following Autologous Melanocyte-Keratinocyte Transplantation and NUVB Therapy: A Case Report.
- Author
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Nilforoushzadeh MA, Nouri M, Alavi S, Amirkhani MA, Zare S, Alavi Rad E, Roohaninasab M, Behrangi E, Shamloo A, Maleki B, and Zare S
- Abstract
Introduction: There are various types of treatment targeting healing traumatic or accidental skin scars. Transplantation of skin grafts and surgical alternatives, including autologous transplantation of melanocyte-keratinocyte suspension, have also been suggested previously. This study is representing a case of previous skin graft transplantation, complaining of scar formation and discoloration on the transplanted segment. Case Presentation: The patient was a 37-year-old lady. This patient underwent melanocyte-keratinocyte suspension transplantation and narrow-band ultraviolet B (NUVB) therapy and could reach 40% re-pigmentation enhancement. This method could be introduced as an efficient and safe method of approaching facial scarring. Conclusion: This method could be introduced as an efficient and safe method of approaching facial scarring., Competing Interests: The authors declare that they have no conflict of interest., (Copyright © 2022 J Lasers Med Sci.)
- Published
- 2022
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31. Microfluidic devices employing chemo- and thermotaxis for sperm selection can improve sperm parameters and function in patients with high DNA fragmentation.
- Author
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Doostabadi MR, Mangoli E, Marvast LD, Dehghanpour F, Maleki B, Torkashvand H, and Talebi AR
- Subjects
- Humans, Male, DNA Fragmentation, Lab-On-A-Chip Devices, Semen, Spermatozoa, Sperm Motility, Taxis Response
- Abstract
Conventional sperm processing uses centrifugation has a negative effect on sperm parameters and DNA integrity. We designed and fabricated a novel microfluid device based on chemotaxis and thermotaxis, and compared it with the swim-up method. Twenty normal samples with high DNA fragmentation were included. Each sample was divided into four groups: Group 1, control, Group 2: sperm selection by thermotaxis, Group 3: sperm selection by chemotaxis, and Group 4: sperm selection with thermotaxis and chemotaxis. We used cumulus cells in a microfluid device to create chemotaxis, and, two warm stages to form a temperature gradient for thermotaxis. The spermatozoa were assessed based on the concentration, motility, and fine morphology using Motile Sperm Organelle Morphology Examination, mitochondrial membrane potential (MMP), acrosome reaction (AR), and sperm DNA fragmentation. Concentration (22.40 ± 5.39 vs. 66.50 ± 19.21; p < 0.001) and DNA fragmentation (12.30 ± 3.96% vs. 17.95 ± 2.89%; p < 0.001) after selection in the chemotaxis and thermotaxis microfluid device were significantly lower than control group. The progressive motility (93.75 ± 4.39% vs. 75.55 ± 5.86%, p < 0.001), normal morphology (15.45 ± 2.50% vs. 10.35 ± 3.36, p < 0.001), MMP (97.65 ± 1.81% vs. 94 ± 3.89%, p = 0.02), and AR status (79.20 ± 5.28% vs. 31.20 ± 5.24%, p < 0.001) in the chemotaxis and thermotaxis microfluid device were significantly increased compared to control group. According to these findings, spermatozoa that have penetrated the cumulus oophorus have better morphology and motility, as well as acrosome reactivity and DNA integrity., (© 2022 Wiley-VCH GmbH.)
- Published
- 2022
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32. A precise review on NAATs-based diagnostic assays for COVID-19: A motion in fast POC molecular tests.
- Author
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Maleki B and Hojati Z
- Subjects
- COVID-19 Testing, Clinical Laboratory Techniques, Humans, Nucleic Acid Amplification Techniques methods, RNA, Viral, SARS-CoV-2 genetics, Sensitivity and Specificity, COVID-19 diagnosis
- Abstract
Background: Diagnosis is one of the main strategies to deal with infectious and deadly diseases such as coronavirus disease 2019 (COVID-19). The global pandemic of COVID-19 has led to an immediate need to expand rapid diagnostic techniques. New isothermal-based methods are being developed for COVID-19 detection aiming to resolve the limitations related to the reverse transcription-quantitative polymerase chain reaction (RT-qPCR) method through immediate samples processing and minimizing false-negative or ambiguous results. Advances in nucleic acid amplification techniques (NAATs) can provide affordable and easy-to-use diagnostic platforms with high sensitivity and specificity in order to be available to the public as approved commercial kits., Aims: The development of point-of-care (POC) testing can assist in rapid clinical decision-making and mitigate burdens on health care facilities. Finally, we discussed the different diagnostic methods based on NAATs for COVID-19 in detail. Comparative parameters are addressed for all assays and Emergency Use Authorizations (EUA)-approved commercial tests are cited., Conclusions: Isothermal-coupled methods and LAMP-based molecular methods have been suggested as suitable portable tests with high diagnostic speed for use in POC testing., (© 2022 Stichting European Society for Clinical Investigation Journal Foundation. Published by John Wiley & Sons Ltd.)
- Published
- 2022
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33. Magnetic nanoparticle-supported eosin Y salt [SB-DABCO@eosin] as an efficient heterogeneous photocatalyst for the multi-component synthesis of chromeno[4,3- b ]chromene in the presence of visible light.
- Author
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Jarrahi M, Maleki B, and Tayebee R
- Abstract
Heterogeneous photocatalysts present a favourable procedure to realize green and eco-friendly organic reactions. We have demonstrated an SB-DABCO@eosin catalyst in a green one-pot multi-component protocol for the production of various chromeno[4,3- b ]chromenes via condensation of aromatic aldehydes and dimedone under the photo-redox catalyst bearing eosin Y using visible light. The synthesized nanocatalyst was characterized using various physicochemical techniques such as FT-IR, XRD, EDX, UV-vis, SEM, TGA and DRS. The significant advantages of the present methodology include excellent yield, cost-effectiveness, easy work-up, 100% atom economy, broad substrate scope, easy separation and efficient recycling. Furthermore, the evidence showed that the investigated condensation reaction proceeds via a radical mechanism, which proved the need for reactive species such as OH˙ and ˙O
2 - in the photocatalytic process. In addition to the improved handling and process control, the yield of products and the rate of reactions have increased considerably in the present strategy. Reproducibility studies also guarantee good reusability and stability of the nanocatalyst for at least five runs., Competing Interests: There are no conflicts to declare., (This journal is © The Royal Society of Chemistry.)- Published
- 2022
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34. An Organoid Nevus with Four Adnexal Differentiations: A Case Report.
- Author
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Yaghoobi R, Pazyar N, and Maleki B
- Abstract
Competing Interests: There are no conflicts of interest.
- Published
- 2022
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35. Creatine@SiO 2 @Fe 3 O 4 nanocomposite as an efficient sorbent for magnetic solid-phase extraction of escitalopram and chlordiazepoxide from urine samples through quantitation via HPLC-UV.
- Author
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Laffafchi F, Tajbakhsh M, Sarrafi Y, Ghani M, and Maleki B
- Subjects
- Chlordiazepoxide, Chromatography, High Pressure Liquid, Creatine, Escitalopram, Limit of Detection, Magnetic Phenomena, Solid Phase Extraction methods, Nanocomposites, Silicon Dioxide chemistry
- Abstract
An efficient, cost-effective, and fast-synthesis method is presented in the current study to prepare magnetic nanoparticles covered by cheap and nitrogen-rich creatine. The hydrothermal method was used for the synthesis of the magnetic core. The prepared magnetic core was then covered by SiO
2 and subsequently functionalized using creatine. The prepared creatine@SiO2 @Fe3 O4 was utilized as a sorbent in the magnetic solid-phase extraction of the selected antidepressants including escitalopram and chlordiazepoxide as the model drugs. The extracted drugs were desorbed by a suitable organic solvent and analyzed by high-performance liquid chromatography equipped with an ultraviolet detection system. The influence of different variables on the magnetic solid-phase extraction method was examined by the Plackett-Burman and Box-Behnken designs for screening and optimization, respectively. Under the obtained optimum conditions, the linear ranges of the method were found to be in the range of 1-500 µg L-1 . The limits of detection and limits of quantification were in the range of 0.27-0.63 µg L-1 and 0.89-1.93 µg L-1 for the selected analytes, respectively. Furthermore, the enrichment factors were found to be 79.8 and 92.7 for chlordiazepoxide and escitalopram, respectively. The method was successfully employed for the analysis of selected drugs in urine samples., (© 2022 Wiley-VCH GmbH.)- Published
- 2022
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36. Effectiveness of Exercise Training on Male Factor Infertility: A Systematic Review and Network Meta-analysis.
- Author
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Hajizadeh Maleki B, Tartibian B, and Chehrazi M
- Subjects
- Biomarkers, Exercise, Humans, Inflammation, Male, Network Meta-Analysis, High-Intensity Interval Training methods, Infertility
- Abstract
Context: Mounting evidence from the literature suggests that different types of training interventions can be successful at improving several aspects of male reproductive function in both fertile and infertile populations., Objective: The aim of this study was to evaluate the effectiveness of exercise training on male factor infertility and seminal markers of inflammation., Data Sources: We searched PubMed, CISCOM, Springer, Elsevier Science, Cochrane Central Register of Controlled Trials, Scopus, PEDro, Ovid (Medline, EMBASE, PsycINFO), Sport Discus, Orbis, CINAHL, Web of Science, ProQuest, and the ClinicalTrials.gov registry for randomized controlled trials (RCTs) that analyzed the impacts of selected types of exercise interventions on markers of male reproductive function and reproductive performance., Study Selection: A total of 336 records were identified, of which we included 7 trials reporting on 2641 fertile and infertile men in the systematic review and network meta-analysis., Level of Evidence: Level 1 (because this is a systematic review of RCTs)., Data Extraction: The data included the study design, participant characteristics, inclusion and exclusion, intervention characteristics, outcome measures, and the main results of the study., Results: The results of network meta-analysis showed that, compared with a nonintervention control group, the top-ranking interventions for pregnancy rate were for combined aerobic and resistance training (CET) (relative risk [RR] = 27.81), moderate-intensity continuous training (MICT) (RR = 26.67), resistance training (RT) (RR = 12.54), high-intensity continuous training (HICT) (RR = 5.55), and high-intensity interval training (HIIT) (RR = 4.63). While the top-ranking interventions for live birth rate were for MICT (RR = 10.05), RT (RR = 4.92), HIIT (RR = 4.38), CET (RR = 2.20), and HICT (RR = 1.55). Also, with the following order of effectiveness, 5 training strategies were significantly better at improving semen quality parameters (CET > MICT > HICT > RT > HIIT), seminal markers of oxidative stress (CET > MICT > HIIT > HICT > RT), seminal markers of inflammation (CET > MICT > HIIT > RT > HICT), as well as measures of body composition and VO
2 max (CET > HICT > MICT > HIIT > RT)., Conclusion: The review recommends that the intervention with the highest probability of being the best approach out of all available options for improving the male factor infertility was for CET.- Published
- 2022
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37. Towards the First Multiepitope Vaccine Candidate against Neospora caninum in Mouse Model: Immunoinformatic Standpoint.
- Author
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Shams M, Maleki B, Kordi B, Majidiani H, Nazari N, Irannejad H, and Asghari A
- Subjects
- Animals, Antigens, Protozoan genetics, Cattle, Female, Interferon-gamma metabolism, Mice, Pregnancy, Toll-Like Receptor 4, Coccidiosis prevention & control, Neospora, Protozoan Vaccines
- Abstract
Neospora caninum is an economically significant parasite among livestock, particularly in dairy cattle herds, causing storm abortions. Vaccination seems necessary to limit the infection and its harsh consequences. This is the first steps towards developing a multiepitope vaccine candidate against N. caninum using in silico approaches. High-ranked mouse MHC-binding and shared linear B-cell epitopes from six proteins (SRS2, MIC3, MIC6, GRA1, IMP-1, and profilin) as well as IFN- γ -inducing epitopes (from SAG1) were predicted, screened, and connected together through appropriate linkers. Finally, RS-09 protein (TLR4 agonist) and histidine tag were added to N- and C-terminal of the vaccine sequence, yielding 486 residues in length. Physicochemical properties showed a stable (instability index: 27.23), highly soluble, antigenic (VaxiJen score: 0.9554), and nonallergenic candidate. Secondary structure of the multiepitope protein included 58.85% random coil, 20.99% extended strand, and 20.16% alpha helix. Also, the tertiary structure was predicted, and further analyses validated a stable interaction between the vaccine model and mouse TLR4 (binding score: -1261.6). Virtual simulation of immune profile demonstrated potently stimulated humoral (IgG+IgM) and cell-mediated (IFN- γ ) responses upon multiepitope vaccine injection. Altogether, a potentially immunogenic vaccine candidate was developed using several N. caninum proteins, with the capability to elicit IFN- γ upsurge and other components of cellular immunity, and can be used in prophylactic purposes against neosporosis., Competing Interests: The authors declare that there are no conflicts of interest., (Copyright © 2022 Morteza Shams et al.)
- Published
- 2022
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38. Relationship between sperm quality and total fertilization failure in intracytoplasmic sperm injection and in vitro fertilization cycles: A cross-sectional study.
- Author
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Safari H, Anbari F, Ghasemi-Esmailabad S, Maleki B, Dehghan Marvast L, and Reza Talebi A
- Abstract
Background: Total fertilization failure (TFF) is associated with essential mechanistic and cellular events., Objective: The present study is a comprehensive examination of detrimental effects with well-known assays for predicting TFF in conventional in vitro fertilization (IVF) and intracytoplasmic sperm injection (ICSI) cycles., Materials and Methods: Semen parameters of 90 men, including 60 cases who had experienced IVF/ICSI failure and a control group of 30 individuals, were evaluated. Sperm chromatin/DNA quality assessments were done by aniline blue, toluidine blue, chromomycin A3, and terminal deoxynucleotidyl transferase-mediated dUTP nick end labeling (TUNEL) assays. A lipid hydroperoxide (LPO) kit was used to measure the LPO, and JC1 staining was used to evaluate mitochondrial membrane potential (MMP)., Results: There were statistically significant differences found between the IVF, ICSI and control groups by the toluidine blue (p = 0.01), TUNEL (p = 0.02), and chromomycin A3 (p < 0.001) tests, but not by the aniline blue staining. Furthermore, there was a significant difference regarding LPO concentration and high MMP in cases of IVF fertilization failure compared to the control group (p = 0.04, p = 0.02, respectively). The logistic regression model showed that sperm viability was predictive for fertilization failure in the ICSI group. Sperm chromatin and DNA quality assays were not predictors for TFF in either group., Conclusion: Cellular events such as high DNA fragmentation damage, high levels of reactive oxygen species, and low MMP levels can cause TFF in IVF and ICSI programs. Diagnostic tests, especially in cases with previous fertilization failure, showed significant differences in sperm chromatin and DNA quality between groups but could not predict the risk of TFF., Competing Interests: The authors declare that there is no conflict of interest., (Copyright © 2022 Safari et al.)
- Published
- 2022
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39. Determination of B and T Cell Epitopes in Neospora caninum Immune Mapped Protein-1 (IMP-1): Implications in Vaccine Design against Neosporosis.
- Author
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Nazari N, Kordi B, Maleki B, Shams M, Azizi E, Majidiani H, and Naserifar R
- Subjects
- Animals, Cattle, Mice, Epitopes, T-Lymphocyte, Protein Sorting Signals, Cattle Diseases, Neospora
- Abstract
Prevention of neosporosis is advantageous for cattle health and productivity. Previously, several vaccine candidates were nominated for vaccination against Neospora caninum . This study was premised on in silico evaluation of N. caninum IMP-1 in order to determine its physicochemical features and immunogenic epitopes. We employed a wide array of network-based tools for the prediction of antigenicity, allergenicity, solubility, posttranslational modification (PTM) sites, physicochemical properties, transmembrane domains and signal peptide, secondary and tertiary structures, and intrinsically disordered regions. Also, prediction and screening of potential continuous B cell peptides and those epitopes having stringent affinity to couple with mouse major histocompatibility complex (MHC) and cytotoxic T lymphocyte (CTL) receptors were accomplished. The protein had 393 residues with a molecular weight of 42.71 kDa, representing aliphatic index of 85.83 (thermotolerant) and GRAVY score of -0.447 (hydrophilic). There were 47 PTM sites without a signal peptide in the sequence. Secondary structure comprised mostly of extended strand and helices, followed by coils. The Ramachandran plot of the refined model showed 90.1%, 9.9%, 0.0%, and 0.0% residues in the favored, additional allowed, generously allowed, and disallowed regions, correspondingly. Additionally, various potential B cell (linear and conformational), CTL, and MHC binding epitopes were predicted for N. caninum IMP-1. The findings of the present study could be further directed for next-generation vaccine design against neosporosis., Competing Interests: The authors declare that there are no conflicts of interest., (Copyright © 2022 Naser Nazari et al.)
- Published
- 2022
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40. Neospora caninum SRS2 Protein: Essential Vaccination Targets and Biochemical Features for Next-Generation Vaccine Design.
- Author
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Asghari A, Kordi B, Maleki B, Majidiani H, Shams M, and Naserifar R
- Subjects
- Animals, Cattle, Epitopes, B-Lymphocyte, Epitopes, T-Lymphocyte, Mice, Protein Sorting Signals, T-Lymphocytes, Cytotoxic, Vaccination, Neospora
- Abstract
Vaccination is a standout preventive measure to combat neosporosis among cattle herds. The present in silico study was done to evaluate the physicochemical properties and potent immunogenic epitopes of N. caninum SRS2 protein as a possible vaccine candidate. Web-based tools were used to predict physicochemical properties, antigenicity, allergenicity, solubility, posttranslational modification (PTM) sites, transmembrane domains and signal peptide, and secondary and tertiary structures as well as intrinsically disordered regions, followed by identification and screening of potential linear and conformational B-cell epitopes and those peptides having affinity to bind mouse major histocompatibility complex (MHC) and cytotoxic T lymphocyte (CTL). The protein had 401 residues with a molecular weight of 42 kDa, representing aliphatic index of 69.35 (thermotolerant) and GRAVY score of -0.294 (hydrophilic). There were 53 PTM sites without a signal peptide in the sequence. Secondary structure comprised mostly by extended strand, followed by helices and coils. The Ramachandran plot of the refined model showed 90.2%, 8.8%, 0.5%, and 0.5% residues in the favored, additional allowed, generously allowed, and disallowed regions, correspondingly. Additionally, various potential B-cell (linear and conformational), CTL, and MHC-binding epitopes were predicted for N. caninum SRS2. These epitopes could be further utilized in the multiepitope vaccine constructs directed against neosporosis., Competing Interests: The authors declare that there are no conflicts of interest., (Copyright © 2022 Ali Asghari et al.)
- Published
- 2022
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41. High occurrence of Blastocystis sp. subtype 3 in individuals referred to medical laboratories in Kermanshah, Iran.
- Author
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Maleki B, Sadraei J, Dalimi Asl A, and Pirestani M
- Abstract
Aim: The current study investigated the prevalence and genotypes of Blastocystis sp. in individuals who referred to medical laboratories in Kermanshah, Iran., Background: Blastocystis sp . is a common intestinal protozoan found in humans and a wide range of animals, and it is involved in the development of gastrointestinal disorders., Methods: A total of 950 stool samples were examined using the standard formalin-ether concentration technique. All specimens were cultured in Robinson xenic medium. Subsequently, DNA extraction and PCR amplification of subtype specific sequence-tagged site (STS) were conducted., Results: Microscopic examination showed that 86 out of 950 samples (9.05%) were infected with Blastocystis sp. Subsequently, 33 of 86 positive samples were cultured and molecularly confirmed by conventional PCR, indicating six subtypes (ST1-ST6). Of note, ST3 (45.0%) was the predominant subtype, followed by ST1 (15.15%) and ST5 (12%)., Conclusion: Based on the current findings, ST3 was the most frequent subtype among all positive samples. Having a better understanding of Blastocystis sp. subtype distribution and risk factors would lead to improved preventive measures., Competing Interests: The authors declare that they have no conflict of interest., (©2022 RIGLD, Research Institute for Gastroenterology and Liver Diseases.)
- Published
- 2022
42. Single sperm vitrification with permeable cryoprotectant-free medium is more effective in patients with severe oligozoospermia and azoospermia.
- Author
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Maleki B, Khalili MA, Gholizadeh L, Mangoli E, and Agha-Rahimi A
- Subjects
- Cryopreservation methods, Cryoprotective Agents pharmacology, Culture Media, Humans, Male, Sperm Motility, Spermatozoa, Sucrose pharmacology, Vitrification, Azoospermia, Oligospermia, Semen Preservation methods
- Abstract
Testicular sperm extraction (TESE) is an invasive surgery for achieving the spermatozoa in cases with azoospermia. In these patients, the number of retrieved spermatozoa is limited and the optimal cryo-storage is very critical for their fertility preservation. Therefore, single sperm vitrification has been introduced for preservation of low number of spermatozoa. The goal was to assess the efficacy of sperm freezing medium (SFM) and sucrose medium as cryoprotectants for single sperm vitrification in cases with severe oligozoospermia and azoospermia. A total of 20 ejaculates from severe oligozoospermia and 20 testicular samples from azoospermia were processed. Twenty-five sperm cells were collected using ICSI injection pipette and transferred to a cryoprotectant droplet placed on the Cryotech, then vitrified by plunging in liquid nitrogen. Sperm motility, viability, fine-morphology, mitochondrial activity and DNA fragmentation index (DFI) were assessed before and after vitrification. Sperm motility, viability and the percentage of cells with mitochondrial activity were significantly decreased after vitrification in both severe oligozoospermic and testicular samples in either cryoprotectants. However, the rates of post-warm sperm motility and the cells with mitochondrial activity increased significantly in sucrose medium in both severe oligozoospermic and testicular samples compared to SFM. In testicular samples, the DFI of spermatozoa vitrified in SFM was significantly higher than those vitrified with sucrose medium. Sperm motility, viability, mitochondrial activity, and DNA integrity were better preserved in sucrose medium than SFM after single cell vitrification. The presented method may be a useful candidate for successful freezing of individual sperm cells in clinical setting., (Copyright © 2021. Published by Elsevier Inc.)
- Published
- 2022
- Full Text
- View/download PDF
43. MicroRNAs and exosomes: Cardiac stem cells in heart diseases.
- Author
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Maleki B, Alani B, Tamehri Zadeh SS, Saadat S, Rajabi A, Ayoubzadeh SMJ, Verdi J, Farrokhian A, Ghanbarian H, Noureddini M, and Nejati M
- Subjects
- Animals, Humans, Myocytes, Cardiac cytology, Cardiovascular Diseases surgery, Exosomes physiology, Heart Diseases surgery, MicroRNAs physiology, Myocytes, Cardiac transplantation, Stem Cell Transplantation
- Abstract
Treating cardiovascular diseases with cardiac stem cells (CSCs) is a valid treatment among various stem cell-based therapies. With supplying the physiological need for cardiovascular cells as their main function, under pathological circumstances, CSCs can also reproduce the myocardial cells. Although studies have identified many of CSCs' functions, our knowledge of molecular pathways that regulate these functions is not complete enough. Either physiological or pathological studies have shown, stem cells proliferation and differentiation could be regulated by microRNAs (miRNAs). How miRNAs regulate CSC behavior is an interesting area of research that can help us study and control the function of these cells in vitro; an achievement that may be beneficial for patients with cardiovascular diseases. The secretome of stem and progenitor cells has been studied and it has been determined that exosomes are the main source of their secretion which are very small vesicles at the nanoscale and originate from endosomes, which are secreted into the extracellular space and act as key signaling organelles in intercellular communication. Mesenchymal stem cells, cardiac-derived progenitor cells, embryonic stem cells, induced pluripotent stem cells (iPSCs), and iPSC-derived cardiomyocytes release exosomes that have been shown to have cardioprotective, immunomodulatory, and reparative effects. Herein, we summarize the regulation roles of miRNAs and exosomes in cardiac stem cells., (Copyright © 2021 Elsevier GmbH. All rights reserved.)
- Published
- 2022
- Full Text
- View/download PDF
44. Subtype distribution of Blastocystis sp. isolated from humans in Iran: a systematic review and meta-analysis.
- Author
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Maleki B, Olfatifar M, Dodangeh S, Ahmadi N, Gorgipour M, and Javanmard E
- Abstract
Aim: This systematic review and meta-analysis evaluated the subtyped Blastocystis sp. isolated from humans in Iran., Background: Blastocystis sp. is an anaerobic intestinal protozoan that infects humans as well as domestic and wild animals, i.e. mammals, amphibians, reptiles, and arthropods., Methods: A comprehensive search for papers published before April 2022 was undertaken utilizing English and Persian databases. The following MeSH keywords were used in the electronic search: ( Blastocystis sp.) AND (molecular OR subtype) AND (prevalence OR epidemiology) AND Iran. The quality of the included studies was evaluated. Thereafter, a random-effects meta-analysis was conducted to estimate the pooled prevalence and odds ratios regarding the included studies., Results: A total of 32 studies comprised of five case-control studies and 27 cross-sectional studies met the eligibility criteria. The overall pooled prevalence of subtyped Blastocystis sp. in Iran was estimated to be 10% (95% confidence interval: 6 to 15%). Eight subtypes of Blastocystis sp. (ST1- ST7 and ST9) were identified in our study, of which ST3 was the most common subtype (0.04); 0.02-0.07). The difference in subtypes between two case and control groups in reported studies was not significant, but the odds ratio of infection by ST3 (0.98; 95% CI, 0.30 to 3.20) was higher in cases., Conclusion: The current systematic review showed that with the exception of ST8 and ST12, all human Blastocystis sp. subtypes reported in the world are found in different parts of Iran., Competing Interests: The authors declare no conflict of interest.
- Published
- 2022
- Full Text
- View/download PDF
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