18 results on '"Fu, Amy K. Y."'
Search Results
2. Deep learning-based polygenic risk analysis for Alzheimer’s disease prediction
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Zhou, Xiaopu, Chen, Yu, Ip, Fanny C. F., Jiang, Yuanbing, Cao, Han, Lv, Ge, Zhong, Huan, Chen, Jiahang, Ye, Tao, Chen, Yuewen, Zhang, Yulin, Ma, Shuangshuang, Lo, Ronnie M. N., Tong, Estella P. S., Mok, Vincent C. T., Kwok, Timothy C. Y., Guo, Qihao, Mok, Kin Y., Shoai, Maryam, Hardy, John, Chen, Lei, Fu, Amy K. Y., and Ip, Nancy Y.
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- 2023
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3. An IL1RL1 genetic variant lowers soluble ST2 levels and the risk effects of APOE-ε4 in female patients with Alzheimer’s disease
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Jiang, Yuanbing, Zhou, Xiaopu, Wong, Hiu Yi, Ouyang, Li, Ip, Fanny C. F., Chau, Vicky M. N., Lau, Shun-Fat, Wu, Wei, Wong, Daniel Y. K., Seo, Heukjin, Fu, Wing-Yu, Lai, Nicole C. H., Chen, Yuewen, Chen, Yu, Tong, Estella P. S., Mok, Vincent C. T., Kwok, Timothy C. Y., Mok, Kin Y., Shoai, Maryam, Lehallier, Benoit, Losada, Patricia Morán, O’Brien, Eleanor, Porter, Tenielle, Laws, Simon M., Hardy, John, Wyss-Coray, Tony, Masters, Colin L., Fu, Amy K. Y., and Ip, Nancy Y.
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- 2022
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4. Brain-wide Cas9-mediated cleavage of a gene causing familial Alzheimer’s disease alleviates amyloid-related pathologies in mice
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Duan, Yangyang, Ye, Tao, Qu, Zhe, Chen, Yuewen, Miranda, Abigail, Zhou, Xiaopu, Lok, Ka-Chun, Chen, Yu, Fu, Amy K. Y., Gradinaru, Viviana, and Ip, Nancy Y.
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- 2022
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5. Lipin1 depletion coordinates neuronal signaling pathways to promote motor and sensory axon regeneration after spinal cord injury.
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Weitao Chen, Junqiang Wu, Chao Yang, Suying Li, Zhewei Liu, Yongyan An, Xuejie Wang, Jiaming Cao, Jiahui Xu, Yangyang Duan, Xue Yuan, Xin Zhang, Yiren Zhou, Pak Kan Ip, Jacque, Fu, Amy K. Y., Ip, Nancy Y., Zhongping Yao, and Kai Liu
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CENTRAL nervous system ,CELL physiology ,LIPID metabolism ,SPINAL cord injuries ,EFFERENT pathways - Abstract
Adult central nervous system (CNS) neurons down-regulate growth programs after injury, leading to persistent regeneration failure. Coordinated lipids metabolism is required to synthesize membrane components during axon regeneration. However, lipids also function as cell signaling molecules. Whether lipid signaling contributes to axon regeneration remains unclear. In this study, we showed that lipin1 orchestrates mechanistic target of rapamycin (mTOR) and STAT3 signaling pathways to determine axon regeneration. We established an mTOR-lipin1-phosphatidic acid/lysophosphatidic acid-mTOR loop that acts as a positive feedback inhibitory signaling, contributing to the persistent suppression of CNS axon regeneration following injury. In addition, lipin1 knockdown (KD) enhances corticospinal tract (CST) sprouting after unilateral pyramidotomy and promotes CST regeneration following complete spinal cord injury (SCI). Furthermore, lipin1 KD enhances sensory axon regeneration after SCI. Overall, our research reveals that lipin1 functions as a central regulator to coordinate mTOR and STAT3 signaling pathways in the CNS neurons and highlights the potential of lipin1 as a promising therapeutic target for promoting the regeneration of motor and sensory axons after SCI. [ABSTRACT FROM AUTHOR]
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- 2024
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6. A blood-based multi-pathway biomarker assay for early detection and staging of Alzheimer's disease across ethnic groups
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Jiang, Yuanbing, Uhm, Hyebin, Ip, Fanny C., Ouyang, Li, Lo, Ronnie M. N., Cheng, Elaine Y. L., Cao, Xiaoyun, Tan, Clara M. C., Law, Brian C. H., Ortiz-Romero, Paula, Puig-Pijoan, Albert, Fernández-Lebrero, Aida, Contador, José, Mok, Kin Ying Boniface, Hardy, John, Kwok, Timothy C. Y., Mok, Vincent C. T., Suárez-Calvet, Marc, Zetterberg, Henrik, Fu, Amy K. Y., Ip, Nancy Yuk-yu, Jiang, Yuanbing, Uhm, Hyebin, Ip, Fanny C., Ouyang, Li, Lo, Ronnie M. N., Cheng, Elaine Y. L., Cao, Xiaoyun, Tan, Clara M. C., Law, Brian C. H., Ortiz-Romero, Paula, Puig-Pijoan, Albert, Fernández-Lebrero, Aida, Contador, José, Mok, Kin Ying Boniface, Hardy, John, Kwok, Timothy C. Y., Mok, Vincent C. T., Suárez-Calvet, Marc, Zetterberg, Henrik, Fu, Amy K. Y., and Ip, Nancy Yuk-yu
- Abstract
INTRODUCTION: Existing blood-based biomarkers for Alzheimer's disease (AD) mainly focus on its pathological features. However, studies on blood-based biomarkers associated with other biological processes for a comprehensive evaluation of AD status are limited. METHODS: We developed a blood-based, multiplex biomarker assay for AD that measures the levels of 21 proteins involved in multiple biological pathways. We evaluated the assay's performance for classifying AD and indicating AD-related endophenotypes in three independent cohorts from Chinese or European-descent populations. RESULTS: The 21-protein assay accurately classified AD (area under the receiver operating characteristic curve [AUC] = 0.9407 to 0.9867) and mild cognitive impairment (MCI; AUC = 0.8434 to 0.8945) while also indicating brain amyloid pathology. Moreover, the assay simultaneously evaluated the changes of five biological processes in individuals and revealed the ethnic-specific dysregulations of biological processes upon AD progression. DISCUSSION: This study demonstrated the utility of a blood-based, multi-pathway biomarker assay for early screening and staging of AD, providing insights for patient stratification and precision medicine. HIGHLIGHTS: The authors developed a blood-based biomarker assay for Alzheimer's disease. The 21-protein assay classifies AD/MCI and indicates brain amyloid pathology. The 21-protein assay can simultaneously assess activities of five biological processes. Ethnic-specific dysregulations of biological processes in AD were revealed. © 2024 The Authors. Alzheimer's & Dementia published by Wiley Periodicals LLC on behalf of Alzheimer's Association.
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- 2024
7. Using blood transcriptome analysis for Alzheimer's disease diagnosis and patient stratification
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Zhong, Huan, primary, Zhou, Xiaopu, additional, Uhm, Hyebin, additional, Jiang, Yuanbing, additional, Cao, Han, additional, Chen, Yu, additional, Mak, Tiffany T. W., additional, Lo, Ronnie Ming Nok, additional, Wong, Bonnie Wing Yan, additional, Cheng, Elaine Yee Ling, additional, Mok, Kin Y., additional, Chan, Andrew Lung Tat, additional, Kwok, Timothy C. Y., additional, Mok, Vincent C. T., additional, Ip, Fanny C. F., additional, Hardy, John, additional, Fu, Amy K. Y., additional, and Ip, Nancy Y., additional
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- 2024
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8. Editorial: Genetics and biomarkers of Alzheimer's disease in Asian populations
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Zhou, Xiaopu, primary, Mok, Kin Y., additional, and Fu, Amy K. Y., additional
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- 2024
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9. A blood‐based multi‐pathway biomarker assay for early detection and staging of Alzheimer's disease across ethnic groups
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Jiang, Yuanbing, primary, Uhm, Hyebin, additional, Ip, Fanny C., additional, Ouyang, Li, additional, Lo, Ronnie M. N., additional, Cheng, Elaine Y. L., additional, Cao, Xiaoyun, additional, Tan, Clara M. C., additional, Law, Brian C. H., additional, Ortiz‐Romero, Paula, additional, Puig‐Pijoan, Albert, additional, Fernández‐Lebrero, Aida, additional, Contador, José, additional, Mok, Kin Y., additional, Hardy, John, additional, Kwok, Timothy C. Y., additional, Mok, Vincent C. T., additional, Suárez‐Calvet, Marc, additional, Zetterberg, Henrik, additional, Fu, Amy K. Y., additional, and Ip, Nancy Y., additional
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- 2024
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10. Transferability of a European-derived Alzheimer’s Disease Genetic Risk Score across Multi-Ancestry Populations
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Nicolas, Aude, primary, Grenier-Boley, Benjamin, additional, Sherva, Richard, additional, Kim, Yoontae, additional, Kikuchi, Masataka, additional, de Rojas, Itziar, additional, Dalmasso, Carolina, additional, Zhou, Xiaopu, additional, Guen, Yann Le, additional, Arboleda-Bustos, Carlos E, additional, Camargos Bicalho, Maria Aparecida, additional, Guerchet, Maëlenn, additional, van der Lee, Sven, additional, Goss, Monica, additional, Castillo, Atahualpa, additional, Bellenguez, Céline, additional, Küçükali, Fahri, additional, Satizabal Barrera, Claudia, additional, Fongang, Bernard, additional, yang, Qiong, additional, Peters, Oliver, additional, Schneider, Anja, additional, Dichgans, Martin, additional, Rujescu, Dan, additional, Scherbaum, Norbert, additional, Deckert, Jürgen, additional, Riedel-Heller, Steffi, additional, Hausner, Lucrezia, additional, Molina Porcel, Laura, additional, Düzel, Emrah, additional, Grimmer, Timo, additional, Wiltfang, Jens, additional, Heilmann-Heimbach, Stefanie, additional, Moebus, Susanne, additional, Tegos, Thomas, additional, Scarmeas, Nikolaos, additional, Dols-Icardo, Oriol, additional, Moreno, Fermin, additional, Pérez-Tur, Jordi, additional, Bullido, María J., additional, Pastor, Pau, additional, Sánchez-Valle, Raquel, additional, Álvarez, Victoria, additional, Cao, Han, additional, Ip, Nancy Y., additional, Fu, Amy K. Y., additional, Ip, Fanny C. F., additional, Olivar, Natividad, additional, Muchnik, Carolina, additional, Cuesta, Carolina, additional, Campanelli, Lorenzo, additional, Solis, Patricia, additional, Politis, Daniel Gustavo, additional, Kochen, Silvia, additional, Brusco, Luis Ignacio, additional, Boada, Mercè, additional, García-González, Pablo, additional, Puerta, Raquel, additional, Mir, Pablo, additional, Real, Luis M, additional, Piñol-Ripoll, Gerard, additional, María García-Alberca, Jose, additional, Luís Royo, Jose, additional, Rodriguez-Rodriguez, Eloy, additional, Soininen, Hilkka, additional, Heikkinen, Sami, additional, de Mendonça, Alexandre, additional, Mehrabian, Shima, additional, Traykov, Latchezar, additional, Hort, Jakub, additional, Vyhnalek, Martin, additional, Rasmussen, Katrine Laura, additional, Qvist Thomassen, Jesper, additional, Pijnenburg, Yolande A.L., additional, Holstege, Henne, additional, van Swieten, John, additional, Ramakers, Inez, additional, Verhey, Frans, additional, van der Lugt, Aad, additional, Scheltens, Philip, additional, Ortega-Rojas, Jenny, additional, Concha Mera, Ana Gabriela, additional, Mahecha, Maria F., additional, Pardo, Rodrogo, additional, Arboleda, Gonzalo, additional, Graff, Caroline, additional, Papenberg, Goran, additional, Giedraitis, Vilmantas, additional, Boland, Anne, additional, Deleuze, Jean-François, additional, Armando de Marco, Luiz, additional, Nunes de Moraes, Edgar, additional, de Viana, Bernardo, additional, Túlio Gualberto Cintra, Marco, additional, Grsiwold, Anthony, additional, Forund, Tatiana, additional, Cruchaga, Carlos, additional, Haines, Jonathan, additional, Farrer, Lindsay, additional, DeStefano, Anita, additional, Wijsman, Ellen, additional, Mayeux, Richard, additional, Pericak-Vance, Margaret, additional, Kunkle, Brian, additional, Goate, Alison, additional, Schellenberg, Gerard D., additional, Vardarajan, Badri, additional, Wang, Li-San, additional, Leung, Yuk Yee, additional, Dalgard, Clifton, additional, Nicolas, Gael, additional, Wallon, David, additional, Dufouil, Carole, additional, Pasquier, Florence, additional, Hanon, Olivier, additional, Debette, Stéphanie, additional, Grünblatt, Edna, additional, Popp, Julius, additional, Angel, Bárbara, additional, Golger, Sergio, additional, Victoria Chacon, Maria, additional, Aranguiz, Rafael, additional, Orellana, Paulina, additional, Slachevsky, Andrea, additional, Gonzalez-Billault, Christian, additional, Albala, Cecilia, additional, Fuentes, Patricio, additional, Porter, Tenielle, additional, Laws, Simon M, additional, Sachdev, Perminder, additional, Mather, Karen, additional, Hauger, Richard L., additional, Merritt, Victoria, additional, Panizzon, Matthew, additional, Zhang, Rui, additional, Gaziano, Michael, additional, Ghidoni, Roberta, additional, Galimberti, Daniela, additional, Arosio, Beatrice, additional, Mecocci, Patrizia, additional, Solfrizzi, Vincenzo, additional, Parnetti, Lucilla, additional, Squassina, Alessio, additional, Tremolizzo, Lucio, additional, Borroni, Barbara, additional, Nacmias, Benedetta, additional, Caffarra, Paolo, additional, Seripa, Davide, additional, Rainero, Innocenzo, additional, Daniele, Antonio, additional, Piras, Fabrizio, additional, Miyashita, Akinori, additional, Hara, Norikazu, additional, Ozaki, Kouichi, additional, Niida, Shumpei, additional, Williams, Julie, additional, Masullo, Carlo, additional, Amouyel, Philippe, additional, Preux, Pierre-Marie, additional, Mbelesso, Pascal, additional, Bandzouzi, Bébène, additional, Saykin, Andy, additional, Jessen, Frank, additional, Kehoe, Patrick, additional, Van Duijn, Cornelia, additional, Gim, Jungsoo, additional, Ben Salem, Nesrine, additional, Frikke-Schmidt, Ruth, additional, Cherni, Lofti, additional, Greicius, Michael D., additional, Tsolaki, Magda, additional, Sánchez-Juan, Pascual, additional, Romano Silva, Marco Aurélio, additional, Sleegers, Kristel, additional, Ingelsson, Martin, additional, Dartigues, Jean-François, additional, Seshadri, Sudha, additional, Rossi, Giacomina, additional, Morelli, Laura, additional, Hiltunen, Mikko, additional, Sims, Rebecca, additional, van der Flier, Wiesje, additional, Andreassen, Ole, additional, Arboleda, Humberto, additional, Escott-Price, Valentina, additional, Ruiz, Agustín, additional, Lee, Kun Ho, additional, Ikeuchi, Takeshi, additional, Ramirez, Alfredo, additional, Logue, Mark, additional, and Lambert, Jean-Charles, additional
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- 2023
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11. Receptor–ligand interaction controls microglial chemotaxis and amelioration of Alzheimer's disease pathology
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Lau, Shun‐Fat, primary, Fu, Amy K. Y., additional, and Ip, Nancy Y., additional
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- 2023
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12. Neuroscience research in 2024: advances in blood biomarkers and brain omics
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Fu, Amy K Y and Ip, Nancy Y
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- 2025
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13. Multi‐Omics‐Based Autophagy‐Related Untypical Subtypes in Patients with Cerebral Amyloid Pathology
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Park, Jong‐Chan, primary, Barahona‐Torres, Natalia, additional, Jang, So‐Yeong, additional, Mok, Kin Y., additional, Kim, Haeng Jun, additional, Han, Sun‐Ho, additional, Cho, Kwang‐Hyun, additional, Zhou, Xiaopu, additional, Fu, Amy K. Y., additional, Ip, Nancy Y., additional, Seo, Jieun, additional, Choi, Murim, additional, Jeong, Hyobin, additional, Hwang, Daehee, additional, Lee, Dong Young, additional, Byun, Min Soo, additional, Yi, Dahyun, additional, Han, Jong Won, additional, Mook‐Jung, Inhee, additional, and Hardy, John, additional
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- 2022
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14. Editorial: Genetics and biomarkers of Alzheimer's disease in Asian populations.
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Xiaopu Zhou, Mok, Kin Y., and Fu, Amy K. Y.
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- 2024
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15. Instructive roles of astrocytes in hippocampal synaptic plasticity: neuronal activity‐dependent regulatory mechanisms.
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Wang, Ye, Fu, Amy K. Y., and Ip, Nancy Y.
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NEUROPLASTICITY , *ASTROCYTES , *HIPPOCAMPUS (Brain) , *ALZHEIMER'S patients , *NEUROGLIA - Abstract
In the adult hippocampus, synaptic plasticity is important for information processing, learning, and memory encoding. Astrocytes, the most common glial cells, play a pivotal role in the regulation of hippocampal synaptic plasticity. While astrocytes were initially described as a homogenous cell population, emerging evidence indicates that in the adult hippocampus, astrocytes are highly heterogeneous and can differentially respond to changes in neuronal activity in a subregion‐dependent manner to actively modulate synaptic plasticity. In this review, we summarize how local neuronal activity changes regulate the interactions between astrocytes and synapses, either by modulating the secretion of gliotransmitters and synaptogenic proteins or via contact‐mediated signaling pathways. In turn, these specific responses induced in astrocytes mediate the interactions between astrocytes and neurons, thus shaping synaptic communication in the adult hippocampus. Importantly, the activation of astrocytic signaling is required for memory performance including memory acquisition and recall. Meanwhile, the dysregulation of this signaling can cause hippocampal circuit dysfunction in pathological conditions, resulting in cognitive impairment and neurodegeneration. Indeed, reactive astrocytes, which have dysregulated signaling associated with memory, are induced in the brains of patients with Alzheimer's disease (AD) and transgenic mouse model of AD. Emerging technologies that can precisely manipulate and monitor astrocytic signaling in vivo enable the examination of the specific actions of astrocytes in response to neuronal activity changes as well as how they modulate synaptic connections and circuit activity. Such findings will clarify the roles of astrocytes in hippocampal synaptic plasticity and memory in health and disease. [ABSTRACT FROM AUTHOR]
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- 2022
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16. Transethnic analysis identifies SORL1 variants and haplotypes protective against Alzheimer's disease.
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Zhou X, Cao H, Jiang Y, Chen Y, Zhong H, Fu WY, Lo RMN, Wong BWY, Cheng EYL, Mok KY, Kwok TCY, Mok VCT, Ip FCF, Miyashita A, Hara N, Ikeuchi T, Hardy J, Chen Y, Fu AKY, and Ip NY
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- Humans, Male, Female, White People genetics, Aged, Polymorphism, Single Nucleotide genetics, Genetic Predisposition to Disease genetics, Alzheimer Disease genetics, Alzheimer Disease ethnology, Alzheimer Disease prevention & control, Haplotypes, LDL-Receptor Related Proteins genetics, Membrane Transport Proteins genetics, Asian People genetics
- Abstract
Introduction: The SORL1 locus exhibits protective effects against Alzheimer's disease (AD) across ancestries, yet systematic studies in diverse populations are sparse., Methods: Logistic regression identified AD-associated SORL1 haplotypes in East Asian (N = 5249) and European (N = 8588) populations. Association analysis between SORL1 haplotypes and AD-associated traits or plasma biomarkers was conducted. The effects of non-synonymous mutations were assessed in cell-based systems., Results: Protective SORL1 variants/haplotypes were identified in the East Asian and European populations. Haplotype Hap_A showed a strong protective effect against AD in East Asians, linked to less severe AD phenotypes, higher SORL1 transcript levels, and plasma proteomic changes. A missense variant within Hap_A, rs2282647-C allele, was linked to a lower risk of AD and decreased expression of a truncated SORL1 protein isoform., Discussion: Our transethnic analysis revealed key SORL1 haplotypes that exert protective effects against AD, suggesting mechanisms of the protective role of SORL1 in AD., Highlights: We examined the AD-protective mechanisms of SORL1 in the general population across diverse ancestral backgrounds by jointly analyzing data from three East Asian cohorts (ie, mainland China, Hong Kong, and Japan) and a European cohort. Comparative analysis unveiled key ethnic-specific SORL1 genetic variants and haplotypes. Among these, the SORL1 minor haplotype, Hap_A, emerged as the primary AD-protective factor in East Asians. Hap_A exerts significant AD-protective effects in both APOE ε4 carriers and non-carriers. SORL1 haplotype Hap_A is associated with cognitive function, brain volume, and the activity of specific neuronal and immune-related pathways closely connected to AD risk. Protective variants within Hap_A are linked to increased SORL1 expression in human tissues. We identified an isoform-specific missense variant in Hap_A that modifies the function and levels of a truncated SORL1 protein isoform that is poorly investigated., (© 2024 The Author(s). Alzheimer's & Dementia published by Wiley Periodicals LLC on behalf of Alzheimer's Association.)
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- 2025
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17. The noncoding circular RNA circHomer1 regulates developmental experience-dependent plasticity in mouse visual cortex.
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Jenks KR, Cai Y, Nayan ME, Tsimring K, Li K, Zepeda JC, Heller GR, Delepine C, Shih J, Yuan S, Zhu Y, Wang Y, Duan Y, Fu AKY, Ku T, Yun DH, Chung K, Zhang C, Boyden ES, Mellios N, Sur M, and Kan Ip JP
- Abstract
Circular RNAs (circRNAs) are noncoding RNAs abundant in brain tissue, and many are derived from activity-dependent, linear mRNAs encoding for synaptic proteins, suggesting that circRNAs may directly or indirectly play a role in regulating synaptic development, plasticity, and function. However, it is unclear if the circular forms of these RNAs are similarly regulated by activity and what role these circRNAs play in developmental plasticity. Here, we employed transcriptome-wide analysis comparing differential expression of both mRNAs and circRNAs in juvenile mouse primary visual cortex (V1) following monocular deprivation (MD), a model of developmental plasticity. Among the differentially expressed mRNAs and circRNAs following 3-day MD, the circular and the activity-dependent linear forms of the Homer1 gene, circHomer1 and Homer1a respectively, were of interest as their expression changed in opposite directions: circHomer1 expression increased while the expression of Homer1a decreased following MD. Knockdown of circHomer1 prevented the depression of closed-eye responses normally observed after 3-day MD. circHomer1 -knockdown led to a reduction in average dendritic spine size prior to MD, but critically there was no further reduction after 3-day MD, consistent with impaired structural plasticity. circHomer1 -knockdown also prevented the reduction of surface AMPA receptors after 3-day MD. Synapse-localized puncta of the AMPA receptor endocytic protein Arc increased in volume after MD but were smaller in circHomer1 -knockdown neurons, suggesting that circHomer1 regulates plasticity through mechanisms of activity-dependent AMPA receptor endocytosis. Thus, activity-dependent circRNAs regulate developmental synaptic plasticity, and our findings highlight the essential role of circHomer1 in V1 plasticity induced by short-term MD., Competing Interests: Competing Interest Statement N.M. is CSO of Circular Genomics Inc, Albuquerque, NM.
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- 2024
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18. Neuronal γ-secretase regulates synaptic functions via cholesterol homeostasis.
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Fu WY, Fu AKY, and Ip NY
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- Humans, Synaptic Transmission physiology, Homeostasis, Cholesterol metabolism, Synapses metabolism, Amyloid Precursor Protein Secretases metabolism, Neurons metabolism
- Abstract
In this issue of Neuron, Essayan-Perez and Südhof
1 demonstrate roles for γ-secretase in the regulation of synaptic functions in human neurons. Chronic attenuation of γ-secretase activity increases synapse formation but decreases neurotransmission (i.e., the probability of presynaptic release), likely due to impairment of cholesterol metabolism., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2023 Elsevier Inc. All rights reserved.)- Published
- 2023
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