40 results on '"Christian, Baumgartner"'
Search Results
2. Innovation in Responsible Management Education: Preparing the Changemakers of Tomorrow
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Regina Obexer, Desiree Wieser, Christian Baumgartner, Elisabeth Fröhlich, Alfred Rosenbloom, Anita Zehrer, Regina Obexer, Desiree Wieser, Christian Baumgartner, Elisabeth Fröhlich, Alfred Rosenbloom, Anita Zehrer
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- 2024
3. Shedding Light on Cardiac Excitation: In Vitro and In Silico Analysis of Native Ca2+ Channel Activation in Guinea Pig Cardiomyocytes Using Organic Photovoltaic Devices.
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Theresa Rienmüller, Niroj Shrestha, Mathias Polz, Sara Stoppacher, Daniel Ziesel, Ludovico Migliaccio, Brigitte Pelzmann, Petra Lang, Klaus Zorn-Pauly, Sonja Langthaler, Aleksandar Opancar, Christian Baumgartner, Muammer üçal, Rainer Schindl, Vedran Derek, and Susanne Scheruebel
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- 2024
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4. How enoxaparin underdosing and sex contribute to achieving therapeutic anti-Xa levels
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Alexander Tinchon, Joana Brait, Sascha Klee, Uwe Graichen, Christian Baumgartner, Oliver Friedrich, Elisabeth Freydl, Stefan Oberndorfer, Walter Struhal, Barbara Hain, Christoph Waiß, and Dagmar Stoiber
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anti-Xa ,enoxaparin ,underdosing ,sex ,gender ,therapeutic ,Therapeutics. Pharmacology ,RM1-950 - Abstract
IntroductionAnti-Xa serves as a clinical surrogate for assessing the efficacy and bleeding risk in patients treated with enoxaparin for thromboembolic events. Evidence from the literature and empirical observations suggest that patients are underdosed in clinical practice to avoid bleeding complications. This study aimed to investigate such underdosing of enoxaparin and its potential impact on achieving therapeutic anti-Xa levels.MethodsThis multicentric, retrospective, observational study included patients with acute ischemic stroke due to atrial fibrillation. All patients received enoxaparin in the therapeutic setting with subsequent anti-Xa measurements. The one-sample, one-tailed Wilcoxon signed-rank test was used to identify a significant difference between the doses administered and the recommended daily dose. Logistic regression model analysis was performed to identify additional predictors affecting achievement of the therapeutic anti-Xa target range. Stepwise forward-backward selection with Akaike’s information criterion as metric was applied to refine the logistic regression model.ResultsA total of 145 patients from the university hospitals of St. Pölten and Tulln in Lower Austria were included. The median daily enoxaparin dose administered was 1.23 mg/kg, resulting in an overall target range achievement rate of 66%. As compared to recommended therapeutic doses, significant underdosing of enoxaparin was evident in both participating centers (p < 0.001). The calculated threshold dose to achieve the therapeutic target range with a 90% probability was 1.5 mg/kg enoxaparin daily. Female sex was found to be a strong independent predictor of achieving a therapeutic target range (OR 9.44; 95% CI 3.40–30.05, p < 0.001).ConclusionDespite the underdosing observed in both centers, therapeutic anti-Xa levels were achieved with lower than recommended doses of enoxaparin, and women required even lower doses than men. These findings warrant further confirmation by prospective studies.
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- 2024
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5. The bioelectric mechanisms of local calcium dynamics in cancer cell proliferation: an extension of the A549 in silico cell model
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Sonja Langthaler, Christian Zumpf, Theresa Rienmüller, Niroj Shrestha, Julia Fuchs, Rui Zhou, Brigitte Pelzmann, Klaus Zorn-Pauly, Eleonore Fröhlich, Seth H. Weinberg, and Christian Baumgartner
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in silico models ,electrophysiology ,calcium dynamics ,A549 cell line ,cancer ,Biology (General) ,QH301-705.5 - Abstract
IntroductionAdvances in molecular targeting of ion channels may open up new avenues for therapeutic approaches in cancer based on the cells’ bioelectric properties. In addition to in-vitro or in-vivo models, in silico models can provide deeper insight into the complex role of electrophysiology in cancer and reveal the impact of altered ion channel expression and the membrane potential on malignant processes. The A549 in silico model is the first computational cancer whole-cell ion current model that simulates the bioelectric mechanisms of the human non-small cell lung cancer cell line A549 during the different phases of the cell cycle. This work extends the existing model with a detailed mathematical description of the store-operated Ca2+ entry (SOCE) and the complex local intracellular calcium dynamics, which significantly affect the entire electrophysiological properties of the cell and regulate cell cycle progression.MethodsThe initial model was extended by a multicompartmental approach, addressing the heterogenous calcium profile and dynamics in the ER-PM junction provoked by local calcium entry of store-operated calcium channels (SOCs) and uptake by SERCA pumps. Changes of cytosolic calcium levels due to diffusion from the ER-PM junction, release from the ER by RyR channels and IP3 receptors, as well as corresponding PM channels were simulated and the dynamics evaluated based on calcium imaging data. The model parameters were fitted to available data from two published experimental studies, showing the function of CRAC channels and indirectly of IP3R, RyR and PMCA via changes of the cytosolic calcium levels.ResultsThe proposed calcium description accurately reproduces the dynamics of calcium imaging data and simulates the SOCE mechanisms. In addition, simulations of the combined A549-SOCE model in distinct phases of the cell cycle demonstrate how Ca2+ - dynamics influence responding channels such as KCa, and consequently modulate the membrane potential accordingly.DiscussionLocal calcium distribution and time evolution in microdomains of the cell significantly impact the overall electrophysiological properties and exert control over cell cycle progression. By providing a more profound description, the extended A549-SOCE model represents an important step on the route towards a valid model for oncological research and in silico supported development of novel therapeutic strategies.
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- 2024
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6. Introduction to the Minitrack on Healthcare Applications for Personal Vehicles.
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Michael H. Breitner, Christian Baumgartner, Thomas M. Deserno, and Andreas Rausch 0001
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- 2024
7. Deep Learning-Based Image Registration in Dynamic Myocardial Perfusion CT Imaging.
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Karen Andrea Lara Hernandez, Theresa Rienmüller, Ivan Alexander Juárez, Michaelle Alexander Perez Riz, Favio Reyna, Daniela Baumgartner, Vladimir N. Makarenko, Olga L. Bockeria, Musaffar F. Maksudov, Rainer Rienmüller, and Christian Baumgartner
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- 2023
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8. A regulatory challenge for natural language processing (NLP)‐based tools such as ChatGPT to be legally used for healthcare decisions. Where are we now?
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Christian Baumgartner and Daniela Baumgartner
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artificial intelligence ,ChatGPT ,healthcare decisions ,natural language processing (NLP) ,regulatory approval ,software as medical device (SaMD) ,Medicine (General) ,R5-920 - Published
- 2023
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9. AEPUS: a tool for the Automated Extraction of Pennation angles in Ultrasound images with low Signal-to-noise ratio for plane-wave imaging.
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Sergei Vostrikov, Andrea Cossettini, Christoph Leitner, Christian Baumgartner, and Luca Benini
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- 2022
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10. The world’s first digital cell twin in cancer electrophysiology: a digital revolution in cancer research?
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Christian Baumgartner
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Digital cancer cell twins ,In-silico models ,Cancer electrophysiology ,A549 cells ,Human lung adenocarcinoma ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background The introduction of functional in-silico models, in addition to in-vivo tumor models, opens up new and unlimited possibilities in cancer research and drug development. The world's first digital twin of the A549 cell's electrophysiology in the human lung adenocarcinoma, unveiled in 2021, enables the investigation and evaluation of new research hypotheses about modulating the function of ion channels in the cell membrane, which are important for better understanding cancer development and progression, as well as for developing new drugs and predicting treatments. Main body The developed A549 in-silico model allows virtual simulations of the cell’s rhythmic oscillation of the membrane potential, which can trigger the transition between cell cycle phases. It is able to predict the promotion or interruption of cell cycle progression provoked by targeted activation and inactivation of ion channels, resulting in abnormal hyper- or depolarization of the membrane potential, a potential key signal for the known cancer hallmarks. For example, model simulations of blockade of transient receptor potential cation channels (TRPC6), which are highly expressed during S-G2/M transition, result in a strong hyperpolarization of the cell’s membrane potential that can suppress or bypass the depolarization required for the S-G2/M transition, allowing for possible cell cycle arrest and inhibition of mitosis. All simulated research hypotheses could be verified by experimental studies. Short conclusion Functional, non-phenomenological digital twins, ranging from single cells to cell–cell interactions to 3D tissue models, open new avenues for modern cancer research through "dry lab" approaches that optimally complement established in-vivo and in-vitro methods.
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- 2022
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11. Supercurrent diode effect and magnetochiral anisotropy in few-layer NbSe2
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Lorenz Bauriedl, Christian Bäuml, Lorenz Fuchs, Christian Baumgartner, Nicolas Paulik, Jonas M. Bauer, Kai-Qiang Lin, John M. Lupton, Takashi Taniguchi, Kenji Watanabe, Christoph Strunk, and Nicola Paradiso
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Science - Abstract
The supercurrent diode effect was recently observed in a Nb/V/Ta superlattice thin film with Rashba-type spin-orbit coupling. Here, the authors observe this effect in few-layer NbSe2 crystals driven by valley-Zeeman-type spin-orbit coupling and find that the effect is proportional to out-of-plane magnetic field.
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- 2022
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12. A Human-Centered Machine-Learning Approach for Muscle-Tendon Junction Tracking in Ultrasound Images.
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Christoph Leitner, Robert Jarolim, Bernhard Englmair, Annika Kruse, Karen Andrea Lara Hernandez, Andreas Konrad, Eric Yung-Sheng Su, Jörg Schröttner, Luke A. Kelly, Glen A. Lichtwark, Markus Tilp, and Christian Baumgartner
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- 2022
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13. Comparing a mindfulness- and CBT-based guided self-help Internet- and mobile-based intervention against a waiting list control condition as treatment for adults with frequent cannabis use: a randomized controlled trial of CANreduce 3.0
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Michelle Dey, Andreas Wenger, Christian Baumgartner, Ute Herrmann, Mareike Augsburger, Severin Haug, Doris Malischnig, and Michael P. Schaub
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Cannabis ,Internet-based intervention ,Self-help ,Mindfulness ,Cognitive-behavioral therapy ,Randomized controlled trial ,Psychiatry ,RC435-571 - Abstract
Abstract Background Though Internet- and mobile-based interventions (IMIs) and mindfulness-based interventions (generally delivered in-situ) appear effective for people with substance use disorders, IMIs incorporating mindfulness are largely missing, including those targeting frequent cannabis use. Methods This paper details the protocol for a three-arm randomized controlled trial comparing a mindfulness-based self-help IMI (arm 1) and cognitive-behavioral therapy (CBT)-based self-help IMI (arm 2) versus being on a waiting list (arm 3) in their effectiveness reducing cannabis use in frequent cannabis users. Predictors of retention, adherence and treatment outcomes will be identified and similarities between the two active intervention arms explored. Both active interventions last six weeks and consist of eight modules designed to reduce cannabis use and common mental health symptoms. With a targeted sample size of n = 210 per treatment arm, data will be collected at baseline immediately before program use is initiated; at six weeks, immediately after program completion; and at three and six months post baseline assessment to assess the retention of any gains achieved during treatment. The primary outcome will be number of days of cannabis use over the preceding 30 days. Secondary outcomes will include further measures of cannabis use and use of other substances, changes in mental health symptoms and mindfulness, client satisfaction, intervention retention and adherence, and adverse effects. Data analysis will follow ITT principles and primarily employ (generalized) linear mixed models. Discussion This RCT will provide important insights into the effectiveness of an IMI integrating mindfulness to reduce cannabis use in frequent cannabis users. Trial registration International Standard Randomized Controlled Trial Number Registry: ISRCTN14971662 ; date of registration: 09/09/2021.
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- 2022
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14. A system theory based digital model for predicting the cumulative fluid balance course in intensive care patients
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Mathias Polz, Katharina Bergmoser, Martin Horn, Michael Schörghuber, Jasmina Lozanović, Theresa Rienmüller, and Christian Baumgartner
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fluid balance ,system theory ,transfer function model ,prediction ,intensive care ,decision support ,Physiology ,QP1-981 - Abstract
Background: Surgical interventions can cause severe fluid imbalances in patients undergoing cardiac surgery, affecting length of hospital stay and survival. Therefore, appropriate management of daily fluid goals is a key element of postoperative intensive care in these patients. Because fluid balance is influenced by a complex interplay of patient-, surgery- and intensive care unit (ICU)-specific factors, fluid prediction is difficult and often inaccurate.Methods: A novel system theory based digital model for cumulative fluid balance (CFB) prediction is presented using recorded patient fluid data as the sole parameter source by applying the concept of a transfer function. Using a retrospective dataset of n = 618 cardiac intensive care patients, patient-individual models were created and evaluated. RMSE analyses and error calculations were performed for reasonable combinations of model estimation periods and clinically relevant prediction horizons for CFB.Results: Our models have shown that a clinically relevant time horizon for CFB prediction with the combination of 48 h estimation time and 8–16 h prediction time achieves high accuracy. With an 8-h prediction time, nearly 50% of CFB predictions are within ±0.5 L, and 77% are still within the clinically acceptable range of ±1.0 L.Conclusion: Our study has provided a promising proof of principle and may form the basis for further efforts in the development of computational models for fluid prediction that do not require large datasets for training and validation, as is the case with machine learning or AI-based models. The adaptive transfer function approach allows estimation of CFB course on a dynamically changing patient fluid balance system by simulating the response to the current fluid management regime, providing a useful digital tool for clinicians in daily intensive care.
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- 2023
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15. The opportunities and pitfalls of ChatGPT in clinical and translational medicine
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Christian Baumgartner
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Medicine (General) ,R5-920 - Published
- 2023
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16. Examining differential responses to the Take Care of Me trial: A latent class and moderation analysis
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Jona R. Frohlich, Karli K. Rapinda, Michael P. Schaub, Andreas Wenger, Christian Baumgartner, Edward A. Johnson, Matthijs Blankers, David D. Ebert, Heather D. Hadjistavropoulos, Corey S. Mackenzie, Jeffrey D. Wardell, Jason D. Edgerton, and Matthew T. Keough
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Alcohol use ,Emotional problems ,Latent class analysis ,Moderation ,Online treatment ,Psychology ,BF1-990 ,Social pathology. Social and public welfare. Criminology ,HV1-9960 - Abstract
Given prevalent alcohol misuse-emotional comorbidities among young adults, we developed an internet-based integrated treatment called Take Care of Me. Although the treatment had an impact on several secondary outcomes, effects were not observed for the primary outcome. Therefore, the goal of the current study was to examine heterogeneity in treatment responses. The initial RCT randomized participants to either a treatment or psychoeducational control condition. We conducted an exploratory latent class analysis to distinguish individuals based on pre-treatment risk and then used moderated regressions to examine differential treatment responses based on class membership. We found evidence for three distinct groups. Most participants fell in the “low severity” group (n = 123), followed by the “moderate severity” group (n = 57) who had a higher likelihood of endorsing a previous mental health diagnosis and treatment and higher symptom severity than the low group. The “high severity” group (n = 42) endorsed a family history of alcoholism, and the highest symptom severity and executive dysfunction. Moderated regressions revealed significant class differences in treatment responses. In the treatment condition, high severity (relative to low) participants reported higher alcohol consumption and hazardous drinking and lower quality of life at follow-up, whereas moderate severity (relative to low) individuals had lower alcohol consumption at follow-up, and lower hazardous drinking at end-of-treatment. No class differences were found for participants in the control group. Higher risk individuals in the treatment condition had poorer responses to the program. Tailoring interventions to severity may be important to examine in future research.
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- 2022
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17. Cannabis Use in Adults Who Screen Positive for Attention Deficit/Hyperactivity Disorder: CANreduce 2.0 Randomized Controlled Trial Subgroup Analysis
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Joachim Ahlers, Christian Baumgartner, Mareike Augsburger, Andreas Wenger, Doris Malischnig, Nikolaos Boumparis, Thomas Berger, Lars Stark, David D Ebert, Severin Haug, and Michael P Schaub
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Computer applications to medicine. Medical informatics ,R858-859.7 ,Public aspects of medicine ,RA1-1270 - Abstract
BackgroundPrevalence rates for lifetime cannabis use and cannabis use disorder are much higher in people with attention deficit/hyperactivity disorder than in those without. CANreduce 2.0 is an intervention that is generally effective at reducing cannabis use in cannabis misusers. This self-guided web-based intervention (6-week duration) consists of modules grounded in motivational interviewing and cognitive behavioral therapy. ObjectiveWe aimed to evaluate whether the CANreduce 2.0 intervention affects cannabis use patterns and symptom severity in adults who screen positive for attention deficit/hyperactivity disorder more than in those who do not. MethodsWe performed a secondary analysis of data from a previous study with the inclusion criterion of cannabis use at least once weekly over the last 30 days. Adults with and without attention deficit/hyperactivity disorder (based on the Adult Attention deficit/hyperactivity disorder Self-Report screener) who were enrolled to the active intervention arms of CANreduce 2.0 were compared regarding the number of days cannabis was used in the preceding 30 days, the cannabis use disorder identification test score (CUDIT) and the severity of dependence scale score (SDS) at baseline and the 3-month follow-up. Secondary outcomes were Generalized Anxiety Disorder score, Center for Epidemiological Studies Depression scale score, retention, intervention adherence, and safety. ResultsBoth adults with (n=94) and without (n=273) positive attention-deficit/hyperactivity disorder screening reported significantly reduced frequency (reduction in consumption days: with: mean 11.53, SD 9.28, P
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- 2022
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18. A Systematic Review of the Transthoracic Impedance during Cardiac Defibrillation.
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Yasmine Heyer, Daniela Baumgartner, and Christian Baumgartner
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- 2022
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19. Creating a Novel Mathematical Model of the Kv10.1 Ion Channel and Controlling Channel Activity with Nanoelectromechanical Systems
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Jasmina Lozanović Šajić, Sonja Langthaler, and Christian Baumgartner
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nanoelectromechanical system (NEMS) ,nanorobots ,ion channel Kv10.1 ,mathematical modeling ,system identification ,control algorithm ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The use of nanoelectromechanical systems or nanorobots offers a new concept for sensing and controlling subcellular structures, such as ion channels. We present here a novel method for mathematical modeling of ion channels based on control system theory and system identification. We investigated the use of nanoelectromechanical devices to control the activity of ion channels, particularly the activity of the voltage-gated ion channel Kv10.1, an important channel in cancer development and progression. A mathematical model of the dynamic behavior of the selected ion channel Kv10.1 in the Laplace (s) domain was developed, which is given in the representation of a transfer function. In addition, we addressed the possibilities of controlling ion channel activity by nanoelectromechanical devices and nanorobots and finally presented a control algorithm for the Kv10.1 as a control object. A use case demonstrates the potential of a Kv10.1 controlled nanorobot for cancer treatment at a single-cell level.
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- 2022
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20. Ion Channel Modeling beyond State of the Art: A Comparison with a System Theory-Based Model of the Shaker-Related Voltage-Gated Potassium Channel Kv1.1
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Sonja Langthaler, Jasmina Lozanović Šajić, Theresa Rienmüller, Seth H. Weinberg, and Christian Baumgartner
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ion channels ,electrophysiology ,computational model ,Hodgkin–Huxley ,hidden Markov model ,system and control theory ,Cytology ,QH573-671 - Abstract
The mathematical modeling of ion channel kinetics is an important tool for studying the electrophysiological mechanisms of the nerves, heart, or cancer, from a single cell to an organ. Common approaches use either a Hodgkin–Huxley (HH) or a hidden Markov model (HMM) description, depending on the level of detail of the functionality and structural changes of the underlying channel gating, and taking into account the computational effort for model simulations. Here, we introduce for the first time a novel system theory-based approach for ion channel modeling based on the concept of transfer function characterization, without a priori knowledge of the biological system, using patch clamp measurements. Using the shaker-related voltage-gated potassium channel Kv1.1 (KCNA1) as an example, we compare the established approaches, HH and HMM, with the system theory-based concept in terms of model accuracy, computational effort, the degree of electrophysiological interpretability, and methodological limitations. This highly data-driven modeling concept offers a new opportunity for the phenomenological kinetic modeling of ion channels, exhibiting exceptional accuracy and computational efficiency compared to the conventional methods. The method has a high potential to further improve the quality and computational performance of complex cell and organ model simulations, and could provide a valuable new tool in the field of next-generation in silico electrophysiology.
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- 2022
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21. Temperature-induced modulation of the electrophysiological behavior of A549 lung cancer cells
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Sonja Langthaler, Theresa Rienmüller, Jasmina Lozanović Šajić, and Christian Baumgartner
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Biomedical Engineering - Abstract
Cancer cells typically exhibit altered ion channel expression and membrane potential, wich plays an important role in various processes such as proliferation or apoptosis Hence, therapeutic strategies that modulate ion channel activity or shift the membrane potential prove to be promising for cancer therapy. Since temperature significantly affects ion channel function, deviation from normal body temperture might provide akey factor in electrophysiological progression. In this pilot study, we focused on a first insight into the temperature-induced modulation of A549 cells using an automated patch clamp system. Measurements of 14 cells at hypo-, normo- and hypertermia were accomplished to investigate the temperature-dependent electophysiological behavior. The results revealed that both, temperatures below and above normal body temperature affect the current and potential of A549 cells. In hyperthermia the potential tends to more hyperpolarized values, while conversely, in hypothermic conditions we observer mainly a lower current reponse and thus a depolarization of the membrane potential.
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- 2022
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22. The Kv10.1 voltage-gated ion channel modeling based on control system theory
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Jasmina Lozanović Šajić, Sonja Langthaler, and Christian Baumgartner
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Biomedical Engineering - Abstract
In this paper, we present a control system theory based modeling approach for the voltage-gated ion-channel Kv10.1 at different temperatures. Kv10.1 is expressed in the central nervous system and the brain of healthy humans. The study of the activity of this ion channel is important, because its activity is associated with the occurrence of cancer in different organs or tissues. According to systems and control theory, the voltage-gated channel Kv10.1 was assumed to be a linear time-invariant system and, as such, exhibits dynamic behavior. The experimental results show that Kv10.1 operates as a first-order model based on the input voltage step protocol and the measured macroscopic ion current output.
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- 2022
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23. Holistic Equivalent Circuit Model for Capacitive Extracellular Stimulation
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Mathias Polz, Thomas Rath, Gregor Trimmel, Sara Stoppacher, Marta Nowakowska, Karin Kornmüller, Niroj Shestha, Christian Baumgartner, and Theresa Rienmüller
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Biomedical Engineering - Abstract
Capacitive extracellular stimulation is a common method in implanted stimulation electrodes. The basis for investigating the transmission of stimuli from an electrode to adhered cells are in vitro experiments using calcium imaging or patch clamp measurements. Computational spatial models are used to simulate the mechanism of signal transmission at the cell-electrode interface but require high computing power. In this work, the Stern model to characterize the electrochemical double-layer (EDL) formation and a modified two-domain model are combined into a holistic equivalent circuit modelling capacitive cell stimulation. The described parameters can be directly associated with physicochemical effects. A simulation of the involved control and measurement systems allows the validation of the model with in vitro patch clamp recordings. The relationship of the cell’s distance to the electrode and efficacy of signal transmission could be observed. With this concept we aim to convert different complex approaches into a simple model and thus give an overview of the mechanisms of stimulation. We want to facilitate the interpretation of measured signals especially in voltage clamp measurements.
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- 2022
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24. ChatGPT in Medicine: Ark of the Covenant or Pandora’s Box? Present status and future perspectives: how, what, who and where? (Preprint)
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Luis A. Marín-Castañeda, Jonathan Matías Chejfec-Ciociano, Véronique Verhoeven, Christian Baumgartner, Nino Fijačko, Gregor Štiglic, Lucija Gosak, Mohamed M. Arnaout, Naveen Manohar, Shruthi S. Prasad, Kaushik Bhattacharya, William C. Cho, Takanobu Hirosawa, and Ángel Lee
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BACKGROUND ChatGPT, an artificial intelligence chatbot developed by OpenAI has ushered in a new era of possibilities, offering exciting opportunities for natural language processing in healthcare; it marks a clear paradigm shift in academic research, patient care, and clinical communication. However, a hurried and uninformed implementation of ChatGPT in healthcare settings can have unforeseen results. OBJECTIVE The objective of this study is to discuss and provide a comprehensive summary of the existing literature on ChatGPT based on insights derived from different research teams across diverse disciplines, focusing on the main applications in medicine as conceived by authors who have published on the subject. Furthermore, we seek to address potential concerns associated with the integration of ChatGPT in the medical field, while simultaneously opening up unexplored paths. METHODS The corresponding author selected a group of authors through an initial screening of papers published on ChatGPT from various databases. Based on the replies and their level of cooperation, a dozen authors were chosen for the study and included based on their cooperation and geographic representation. We conducted a comprehensive search across databases, including Web of Science, PubMed, and Scopus. The study followed the PRISMA guidelines for screening and selection. Analysis was performed on the selected articles (n=223), categorizing them based on article type, specialty, and specific role discussed. Descriptive statistics were calculated, and bibliometric analyses were conducted using VOSviewer. RESULTS We identified 223 peer-reviewed articles. Writing assistance emerged as the most widely discussed role of ChatGPT. The rest of the roles included: general use (16%, n=35), education tool (17%, n=37), solution and discussion of clinical vignettes (15%, n=34), valuing and predicting future impact (7%, n=15), information source (5%, n=12), and as a discussion forum about ethical issues (6%, n=14). To detect any difference in usage across continents, a chi-square test for distribution of categorical variables was carried out and yielded a p-value of P=0.56, in article type. Regarding specialty and the role of ChatGPT, the p-values were P=0.86 and P=0.87, respectively. We found no significant association between a specific geographic location and the distribution of any of the variables. CONCLUSIONS This study provides a comprehensive overview of the literature on ChatGPT, revealing its diverse range of applications as observed across different disciplines. By examining the concerns surrounding the integration of ChatGPT in medicine, we underscore the importance of responsible implementation and highlight the need for ongoing research and development in this area. Ultimately, this work opens new perspectives for the detection of unexplored paths and the realization of ChatGPT's potential in enhancing various domains, including medicine.
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- 2023
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25. Searching for the bomb spike in Danube river sediments: Extracting the anthropogenic impact of Vienna
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Diana Hatzenbühler, Michael Weißl, Christian Baumgartner, and Michael Wagreich
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The Anthropocene, the strongly debated potential new unit of the Geological Time Scale, describes the intensified anthropogenic influence on the environment and geological processes, and its traces in geological archives. Regional studies characterizing the growth of human impact, the Anthropocene transformation, are scarce, especially for urban or per-urban environments.In this project, we investigate the anthropogenic impact of the metropolis Vienna on its peri-urban environment and the proposed beginning of the Anthropocene epoch in the 1950s CE by applying sedimentological and geochemical methods. In previous studies (Wagreich et al. 2022), the authors were able to successfully detect the human influence in urban sedimentary archives of Vienna (anthropogenic coarse sediments) using artificial isotopes and anthropogenic trace metals. For our project, we extend the study area from Vienna to the city of Hainburg to investigate Vienna’s anthropogenic impact in both anthropogenic and natural sediments downstream the Danube river. In this area, direct human intervention in the environment, such as ground excavations, backfill and damming, is highly variable, from locally strong (e.g., hydro-power dams, airport constructions), to not existing (National Park Donau-Auen), thus offering a suitable location to trace and quantify the extent of anthropogenic impact.Within petrographic facies, sedimentological and geochemical markers are applied to characterize the anthropogenic strata in this area: The archive of fine-grained natural Danube deposits, i.e. erosional profiles and sediment cores, is analysed for trace metals, artificial radiogenic isotopes, and microplastics with the aim (i) to disentangle the anthropogenic fingerprint of Vienna from the sediment, (ii) to identify and evaluate the proposed Anthropocene geological boundary around 1950 CE, and (iii) to evaluate a potential correlative stratigraphic reference section section/ point for the Anthropocene downstream of Vienna. Finally, the Carnuntum-Vienna Anthropocene field lab offers the opportunity to integrate environmental systems modelling with an Anthropocene equation approach for the temporal and spatial growth of the anthropogenic layers (iv).
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- 2023
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26. From Romans to the Anthropocene: Geoarchaeological Investigations in the Central Vienna Basin (Austria)
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Michael Weissl, Diana Hatzenbühler, Christian Baumgartner, and Michael Wagreich
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The project »From Romans to the Anthropocene, from Carnuntum to Vienna: An Urban Anthropocene Field Lab« (WWTF ESR20-027) focuses on the urban transformation from the Roman legionary camps of Carnuntum and Vindobona to Vienna's periurban areas. Combining historical and geoarchaeological methods, we investigate the diverging development of the two sites and their manifold relations over time. The Danube river crosses the mountain ranges of the Wienerwald and Malé Karpaty, forming the eastern and western limits of the central Vienna Basin. For many centuries, the river was both a barrier and a transportation route. The floodplains and river terraces along the Danube served as concentration areas and battlegrounds during countless conflicts between central Europe and its enemies. The legionary camps of Carnuntum and Vindobona were built during the first century AD at the rim of glacial river terraces, next to the shortest passages across the Danube. During late antiquity, the former provincial capital Carnuntum lost importance. However, Vindobona became first a local center and later the capital of the Austrian rulers. After a sudden Turkish siege in 1529, the fortifications of Vienna were strengthened and maintained until the middle of the 19th century.Urban development of the region over the centuries was limited not only by permanent military threats. North of the Danube, agriculture was always restricted climatically by aridity and sand drift. Most settlements on the riverbanks of the Danube and its tributaries were affected frequently by floods and erosion. Many villages vanished completely as a consequence of such natural hazards. Since some decades, natural river dynamics have been restricted technically, and many areas under cultivation are now irrigated artificially. The analysis of the sedimentary record downstream of Vienna clearly shows the anthropogenic impact on sedimentation processes. Contrary to Carnuntum, Vienna could evolve from a legionary camp step by step into a capital and a strong fortress. The demolition of the city walls after the middle of the 19th century, the following long period of peace, and, in particular, the consequent river engineering, were preconditions for the development into a modern metropolis.
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- 2023
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27. Safety Requirements for Medical Devices in Compliance with European Standards
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Robert Neubauer, Jörg Schröttner, and Christian Baumgartner
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- 2022
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28. Digitale Polizeiarbeit in der Zukunft
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Christian Baumgartner
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- 2022
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29. Best Research Papers in the Field of Sensors, Signals, and Imaging Informatics 2021
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Christian Baumgartner and Thomas M. Deserno
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Diagnostic Imaging ,Machine Learning ,Consensus ,Databases, Factual ,General Medicine ,Medical Informatics - Abstract
Objectives: In this synopsis, we identify and highlight research papers representing noteworthy developments in signals, sensors, and imaging informatics in 2021. Methods: A broad literature search was conducted on PubMed and Scopus databases. We combined Medical Subject Heading (MeSH) terms and keywords to construct particular queries for sensors, signals, and imaging informatics. Except for the sensor section, we only consider papers that have been published in journals providing at least three articles in the query response. Using a three-point Likert scale (1=not include, 2=maybe include, and 3=include), we reviewed the titles and abstracts of all database returns. Only those papers which reached two times three points were further considered for full paper review using the same Likert scale. Again, we only considered works with two times three points and provided these for external reviews. Based on the external reviews, we selected three best papers, as it happens that the three highest ranked papers represent works from all three parts of this section: sensors, signals, and imaging informatics. Results: The search for papers was executed in January 2022. After removing duplicates and conference proceedings, the query returned a set of 88, 376, and 871 papers for sensors, signals, and imaging informatics, respectively. For signals and images, we filtered out journals that had less than three papers in the query results, reducing the number of papers to 215 and 512, respectively. From this total of 815 papers, the section co-editors identified 35 candidate papers with two times three Likert points, from which nine candidate best papers were nominated after full paper assessment. At least three external reviewers then rated the remaining papers and the three best-ranked papers were selected using the composite rating of all external reviewers. By accident, these three papers represent each of the three fields of sensor, signal, and imaging informatics. They were approved by consensus of the International Medical Informatics Association (IMIA) Yearbook editorial board. Deep and machine learning techniques are still a dominant topic as well as concepts beyond the state-of-the-art. Conclusions: Sensors, signals, and imaging informatics is a dynamic field of intense research. Current research focuses on creating and processing heterogeneous sensor data towards meaningful decision support in clinical settings.
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- 2022
30. Properties of a Fully Printed Ultrasound Transducer on Flexible Substrate
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Christoph Leitner, Kirill Keller, Stephan Thurner, Francesco Greco, and Christian Baumgartner
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- 2022
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31. Regulatory Framework for Medical Devices and IVDs in Europe
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Christian Baumgartner, Jörg Schröttner, and Peter S. Müllner
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- 2022
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32. The Danube River Basin
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Nike Sommerwerk, Jürg Bloesch, Christian Baumgartner, Thomas Bittl, Dubravka Čerba, Béla Csányi, Grigore Davideanu, Martin Dokulil, Georg Frank, Iulia Grecu, Thomas Hein, Vladimír Kováč, Iulian Nichersu, Tibor Mikuska, Karin Pall, Momir Paunović, Carmen Postolache, Maja Raković, Cristina Sandu, Martin Schneider-Jacoby, Katharina Stefke, Klement Tockner, Ion Toderaş, and Laurenţia Ungureanu
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- 2022
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33. The Notified Body: The Conformity Assessment Body for Medical Devices in Europe
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Jörg Schröttner and Christian Baumgartner
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- 2022
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34. Contributors
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Knut Ola Aamodt, Skuja Agnija, Briede Agrita, Nuray (Emir) Akbulut, Aydın Akbulut, Margarita Alexevnina, Hans E. Andersen, Nikolas A. Arnaut, Sophie Ayrault, Mikhail Baklanov, Carole Barthélemy, Jürgen Bäthe, Christian Baumgartner, Serdar Bayarı, Horst Behrendt, Jean-Nicolas Beisel, Vitali V. Bekh, François Bertrand, Gilles Billen, Thomas Bittl, Hélène Blanchoud, Jürg Bloesch, Jim Bogen, Alberto Borges, Elena Borovikova, Jean-Paul Bravard, Vanessa Bremerich, John E. Brittain, Sturla Brørs, Catherine Carré, Georges Carrel, Emmanuel Castella, Dubravka Čerba, Régis Cereghino, Grigory Chuiko, F. Comiti, Alexandra Coynel, Béla Csányi, Francis Dauba, Alain Dauta, Grigore Davideanu, François Delmas, Ghislain de Marsily, Jean-Pierre Descy, Doriane Destrieux, Martin Dokulil, Marie-José Dole-Olivier, Alain Dutartre, Svetlana Dvinskikh, Jon Arne Eie, Parele Elga, Arturo Elosegi, Tatiana V. Eremkina, Henri Etcheber, null Euvgeny, Etienne Everbecq, Per Einar Faugli, Maria Joao Feio, Thibaut Feret, Helmut Fischer, Nicolas Flipo, Mathieu Floury, Georg Frank, Nikolai Friberg, Aleksandra Gancarczyk, Josette Garnier, Johnny Gasperi, Yury Gerasimov, Magali Gerino, Gavrilova Ģertrūde, Chris N. Gibbins, Stankūnavičius Gintautas, Gísli M. Gíslason, Rosa Gómez, Paul Gonthier, Manuel A.S. Graça, Iulia Grecu, Cecile Grosbois, B. Gumiero, Sprinǵe Gunta, Justyna Hachoł, Svein Haugland, Thomas Hein, Alan G. Hildrew, Carl.C. Hoffmann, Nils Arne Hvidsten, Kokorīte Ilga, Anna Istomina, Druvietis Ivars, Sonja C. Jähnig, Arne J. Jensen, Jean Joachim, Celia Joaquim-Justo, Dmitry Karabanov, Ioannis Karaouzas, Viktor M. Katolikov, Patrick Kestemont, Alexander Kitaev, Sergey. K. Kochanov, Alexander V. Kokovkin, Ludmila Korneva, Vladimír Kováč, Brian Kronvang, Leonid A. Kudersky, Vyacheslav V. Kuzovlev, Jan Henning L'Abée-Lund, Thibault Lambert, Nicolas Lamouroux, Adrien Latli, Valentina Lazareva, Maria Leitao, Laurence Lestel, Rob S.E.W. Leuven, Boris Levin, Puy Lim, Alexander Litvinov, Nataliya S. Loboda, Zalewski Maciej, B. Maiolini, Florian Malard, Iain A. Malcolm, Łapińska Małgorzata, Björn Malmqvist, Melnik Maria, Schletterer Martin, Kjetil Melvold, Michel Meybeck, Tibor Mikuska, Camille Minaudo, Natalya Mineeva, Florentina Moatar, Cédric Morana, F. Moroni, Jean-Marie Mouchel, Isabel Muñoz, Timo Muotka, Iulian Nichersu, Christer Nilsson, Victor Noskov, Franciszek Nowacki, Alexander Okhapkin, Jón S. Ólafsson, Jean-Michel Olivier, Naciye Nur Özyurt, Karin Pall, Vladimir Papchenkov, Isabel Pardo, Momir Paunović, Morten L. Pedersen, Svetlana Perova, Vegard Pettersen, Hervé Piégay, Lise-Marie Pigneur, Vasily I. Ponomarev, Carmen Postolache, Elena Presnova, Anne Probst, Ekaterina Pryanichnikova, Martin Pusch, Maja Raković, Jean-Pierre Rebillard, Skorupskas Ričardas, Gaumiga Ritma, Christopher T. Robinson, Stéphane Rodrigues, Fleur Roland, Anna M. Romaní, Sergi Sabater, Yalcın Sahin, Svein Jakob Saltveit, José-Miguel Sánchez-Pérez, Leonard Sandin, Cristina Sandu, Sabine Sauvage, Martin Schletterer, Laurent Schmitt, Martin Schneider-Jacoby, Franz Schöll, Matthias Scholten, Elena Seletkova, Pierre Servais, Grigory Shcherbina, Oleksandra O. Shumilova, Galina Shurganova, Boris G. Skakalsky, Nikolaos Th Skoulikidis, Nike Sommerwerk, Yves Souchon, Chris Soulsby, Katharina Stefke, Sonja Stendera, Angelina S. Stenina, Irina Stepanova, Alexander N. Sukhodolov, Lars M. Svendsen, Eric Tabacchi, Evelyne Tales, Doerthe Tetzlaff, Henn Timm, Klement Tockner, Ion Toderaş, Diego Tonolla, Alexander Tsvetkov, Urs Uehlinger, Laurent¸ia Ungureanu, Marin A. Usatii, Philippe Usseglio-Polatera, Gerard Van der Velde, Gisèle Verniers, Philippe Vervier, Irina Voroshilova, Karl Mathias Wantzen, Ewa Wnuk-Gławdel, Christian Wolter, Margarita I. Yarushina, Christiane Zarfl, null Zinov'ev, and Stamatis Zogaris
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- 2022
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35. Light Stimulation of Neurons on Organic Photocapacitors Induces Action Potentials with Millisecond Precision
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Tony Schmidt, Marie Jakešová, Vedran Đerek, Karin Kornmueller, Oleksandra Tiapko, Helmut Bischof, Sandra Burgstaller, Linda Waldherr, Marta Nowakowska, Christian Baumgartner, Muammer Üçal, Gerd Leitinger, Susanne Scheruebel, Silke Patz, Roland Malli, Eric Daniel Głowacki, Theresa Rienmüller, and Rainer Schindl
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Mechanics of Materials ,General Materials Science ,electrostimulation, bioelectronics, photocapacitor, organic, neuron, hek ,Industrial and Manufacturing Engineering - Abstract
Nongenetic optical control of neurons is a powerful technique to study and manipulate the function of the nervous system. This research has benchmarked the performance of organic electrolytic photocapacitor (OEPC) optoelectronic stimulators at the level of single mammalian cells: human embryonic kidney (HEK) cells with heterologously expressed voltage-gated K+ channels and hippocampal primary neurons. OEPCs act as extracellular stimulation electrodes driven by deep red light. The electrophysiological recordings show that millisecond light stimulation of OEPC shifts conductance-voltage plots of voltage-gated K+ channels by ≈30 mV. Models are described both for understanding the experimental findings at the level of K+ channel kinetics in HEK cells, as well as elucidating interpretation of membrane electrophysiology obtained during stimulation with an electrically floating extracellular photoelectrode. A time-dependent increase in voltage-gated channel conductivity in response to OEPC stimulation is demonstrated. These findings are then carried on to cultured primary hippocampal neurons. It is found that millisecond time-scale optical stimuli trigger repetitive action potentials in these neurons. The findings demonstrate that OEPC devices enable the manipulation of neuronal signaling activities with millisecond precision. OEPCs can therefore be integrated into novel in vitro electrophysiology protocols, and the findings can inspire in vivo applications.
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- 2022
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36. A Systematic Review of the Transthoracic Impedance during Cardiac Defibrillation
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Daniela Baumgartner, Christian Baumgartner, and Yasmine Heyer
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Electric Countershock ,Electric Impedance ,Humans ,Heart ,Electrical and Electronic Engineering ,Child ,Cardiography, Impedance ,Electrodes ,Biochemistry ,Instrumentation ,Atomic and Molecular Physics, and Optics ,Analytical Chemistry - Abstract
For cardiac defibrillator testing and design purposes, the range and limits of the human TTI is of high interest. Potential influencing factors regarding the electronic configurations, the electrode/tissue interface and patient characteristics were identified and analyzed. A literature survey based on 71 selected articles was used to review and assess human TTI and the influencing factors found. The human TTI extended from 12 to 212 Ω in the literature selected. Excluding outliers and pediatric measurements, the mean TTI recordings ranged from 51 to 112 Ω with an average TTI of 76.7 Ω under normal distribution. The wide range of human impedance can be attributed to 12 different influencing factors, including shock waveforms and protocols, coupling devices, electrode size and pressure, electrode position, patient age, gender, body dimensions, respiration and lung volume, blood hemoglobin saturation and different pathologies. The coupling device, electrode size and electrode pressure have the greatest influence on TTI.
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- 2022
37. Predicting prediction: A systematic workflow to analyze factors affecting the classification performance in genomic biomarker discovery
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Michael Netzer, Christian Baumgartner, and Daniel Baumgarten
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Machine Learning ,Multidisciplinary ,Gene Expression Profiling ,Biomarkers, Tumor ,Genomics ,Workflow - Abstract
High throughput technologies in genomics enable the analysis of small alterations in gene expression levels. Patterns of such deviations are an important starting point for the discovery and verification of new biomarker candidates. Identifying such patterns is a challenging task that requires sophisticated machine learning approaches. Currently, there are a variety of classification models, and a common approach is to compare the performance and select the best one for a given classification problem. Since the association between the features of a data set and the performance of a particular classification method is still not fully understood, the main contribution of this work is to provide a new methodology for predicting the prediction results of different classifiers in the field of biomarker discovery. We propose here a three-steps computational workflow that includes an analysis of the data set characteristics, the calculation of the classification accuracy and, finally, the prediction of the resulting classification error. The experiments were carried out on synthetic and microarray datasets. Using this method, we showed that the predictability strongly depends on the discriminatory ability of the features, e.g., sets of genes, in two or multi-class datasets. If a dataset has a certain discriminatory ability, this method enables prediction of the classification performance before applying a learning model. Thus, our results contribute to a better understanding of the relationship between dataset characteristics and the corresponding performance of a machine learning method, and suggest the optimal classification method for a given dataset based on its discriminatory ability.
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- 2022
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38. Light Stimulation of Neurons on Organic Photocapacitors Induces Action Potentials with Millisecond Precision (Adv. Mater. Technol. 9/2022)
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Tony Schmidt, Marie Jakešová, Vedran Đerek, Karin Kornmueller, Oleksandra Tiapko, Helmut Bischof, Sandra Burgstaller, Linda Waldherr, Marta Nowakowska, Christian Baumgartner, Muammer Üçal, Gerd Leitinger, Susanne Scheruebel, Silke Patz, Roland Malli, Eric Daniel Głowacki, Theresa Rienmüller, and Rainer Schindl
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Mechanics of Materials ,General Materials Science ,Industrial and Manufacturing Engineering - Published
- 2022
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39. Medical Devices and In Vitro Diagnostics : Requirements in Europe
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Christian Baumgartner, Johann Harer, Jörg Schröttner, Christian Baumgartner, Johann Harer, and Jörg Schröttner
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- Biomedical engineering, Industrial Management, Technological innovations
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This updatable reference work gives a comprehensive overview of all relevant regulatory information and requirements for manufacturers and distributors around medical and in-vitro diagnostic devices in Europe. These individual requirements are presented in a practice-oriented manner, providing the reader with a concrete guide to implementation with main focus on the EU medical device regulations, such as MDR 2017/745 and IVD-R 2017/746, and the relevant standards, such as the ISO 13485, ISO 14971, among others. This book offers a good balance of expert knowledge, empirical values and practice-proven methods. Not only it provides readers with a quick overview about the most important requirements in the medical device sector, yet it shows concrete and proven ways in which these requirements can be implemented in practice. It addresses medical manufacturing companies, professionals in development, production, and quality assurance departments, and technical and medicalstudents who are preparing themselves for a professional career in the medical technlogy industries.
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- 2023
40. Medical Imaging with Deep Learning, MIDL 2023, 10-12 July 2023, Nashville, TN, USA.
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Ipek Oguz, Jack H. Noble, Xiaoxiao Li, Martin Styner, Christian Baumgartner, Mirabela Rusu, Tobias Heimann, Despina Kontos, Bennett A. Landman, and Benoit M. Dawant
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- 2023
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