14 results on '"Ana M. Vale"'
Search Results
2. Mapping the energy-momentum dispersion of hBN excitons and hybrid plasmons in hBN-WSe2 heterostructures
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Hannah C. Nerl, Juan Pablo Guerrero-Felipe, Ana M. Valencia, Khairi Fahad Elyas, Katja Höflich, Christoph T. Koch, and Caterina Cocchi
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Materials of engineering and construction. Mechanics of materials ,TA401-492 ,Chemistry ,QD1-999 - Abstract
Abstract Heterostructures obtained by combining two-dimensional (2D) sheets are widely investigated as a platform for designing new materials with customised characteristics. Transition metal dichalcogenides (TMDCs) are often combined with hexagonal boron nitride (hBN) to enhance their excitonic resonances. However, little is known about how stacking affects excitons and plasmons in TMDCs or their mutual interactions. Here, we combine momentum-resolved electron energy-loss spectroscopy with first-principles calculations to study the energy-momentum dispersion of plasmons in multi-layer WSe 2 -hBN heterostructures as well as in their isolated components. The dispersion of the high-momentum excitons of hBN, alone and in combination with WSe 2 , is mapped across the entire Brillouin zone. Signatures of hybridisation in the plasmon resonances and some of the excitons suggest that the contribution of hBN cannot be neglected when interpreting the response of such a heterostructure. The consequences of using hBN as an encapsulant for TMDCs are also discussed.
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- 2024
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3. Sex-Specific Changes in Cardiac Function and Electrophysiology During Progression of Adenine-Induced Chronic Kidney Disease in Mice
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Valentina Dargam, Anet Sanchez, Aashiya Kolengaden, Yency Perez, Rebekah Arias, Ana M. Valentin Cabrera, Daniel Chaparro, Christopher Tarafa, Alexandra Coba, Nathan Yapaolo, Perony da Silva Nogueira, Emily A. Todd, Monique M. Williams, Lina A. Shehadeh, and Joshua D. Hutcheson
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chronic kidney disease ,heart disease ,echocardiography ,ECG ,sex differences ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Chronic kidney disease (CKD) and cardiovascular disease (CVD) often co-exist, with notable sex-dependent differences in manifestation and progression despite both sexes sharing similar risk factors. Identifying sex-specific diagnostic markers in CKD-induced CVD could elucidate why the development and progression of these diseases differ by sex. Adult, C57BL/6J male and female mice were fed a high-adenine diet for 12 weeks to induce CKD, while control mice were given a normal diet. Adenine-treated males showed more severe CKD than females. Cardiac physiology was evaluated using electrocardiogram (ECG) and echocardiogram markers. Only adenine-treated male mice showed markers of left ventricular (LV) hypertrophy. Adenine males showed markers of LV systolic and diastolic dysfunction throughout regimen duration, worsening as the disease progressed. Adenine males had prolonged QTc interval compared to adenine females and control males. We identified a new ECG marker, Speak-J duration, which increased with disease progression and appeared earlier in adenine-treated males than in females. We identified sex-dependent differences in cardiac structure, function, and electrophysiology in a CKD-induced CVD mouse model, with adenine-treated males displaying markers of LV hypertrophy, dysfunction, and electrophysiological changes. This study demonstrates the feasibility of using this model to investigate sex-dependent cardiac differences resulting from CKD.
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- 2024
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4. Advancing cortisol measurements in zebrafish: Analytical validation of a commercial ELISA kit for skin mucus cortisol analysis
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Sara Jorge, Luís Félix, Benjamín Costas, and Ana M. Valentim
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Skin mucus for cortisol measurement in zebrafish ,Science - Abstract
Cortisol is the main stress biomarker used for zebrafish. However, zebrafish small size made it challenging to extract cortisol without harming or killing the fish. Thus, researchers adopted a terminal method, the trunk cortisol, as standard practice. Here, we developed and validated an alternative and minimally invasive technique for measuring cortisol in the skin mucus of adult zebrafish, using a commercial enzyme-linked immunosorbent assay (ELISA). For this, AB zebrafish were randomly assigned to a precision, accuracy, and specificity test. Each sample contained the skin mucus of five to ten fish or one fish trunk. The cortisol was extracted using methanol as organic solvent. The results obtained showed an adequate precision (intra-assay coefficient of variation (CV)
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- 2024
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5. A neonatal mouse model characterizes transmissibility of SARS-CoV-2 variants and reveals a role for ORF8
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Bruno A. Rodriguez-Rodriguez, Grace O. Ciabattoni, Ralf Duerr, Ana M. Valero-Jimenez, Stephen T. Yeung, Keaton M. Crosse, Austin R. Schinlever, Lucie Bernard-Raichon, Joaquin Rodriguez Galvan, Marisa E. McGrath, Sanjay Vashee, Yong Xue, Cynthia A. Loomis, Kamal M. Khanna, Ken Cadwell, Ludovic Desvignes, Matthew B. Frieman, Mila B. Ortigoza, and Meike Dittmann
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Science - Abstract
Abstract Small animal models have been a challenge for the study of SARS-CoV-2 transmission, with most investigators using golden hamsters or ferrets. Mice have the advantages of low cost, wide availability, less regulatory and husbandry challenges, and the existence of a versatile reagent and genetic toolbox. However, adult mice do not robustly transmit SARS-CoV-2. Here we establish a model based on neonatal mice that allows for transmission of clinical SARS-CoV-2 isolates. We characterize tropism, respiratory tract replication and transmission of ancestral WA-1 compared to variants Alpha (B.1.1.7), Beta (B.1.351), Gamma (P.1), Delta (B.1.617.2), Omicron BA.1 and Omicron BQ.1.1. We identify inter-variant differences in timing and magnitude of infectious particle shedding from index mice, both of which shape transmission to contact mice. Furthermore, we characterize two recombinant SARS-CoV-2 lacking either the ORF6 or ORF8 host antagonists. The removal of ORF8 shifts viral replication towards the lower respiratory tract, resulting in significantly delayed and reduced transmission in our model. Our results demonstrate the potential of our neonatal mouse model to characterize viral and host determinants of SARS-CoV-2 transmission, while revealing a role for an accessory protein in this context.
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- 2023
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6. The extinct marine megafauna of the Phanerozoic
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Catalina Pimiento, Kristína Kocáková, Gregor H. Mathes, Thodoris Argyriou, Edwin-Alberto Cadena, Jack A. Cooper, Dirley Cortés, Daniel J. Field, Christian Klug, Torsten M. Scheyer, Ana M. Valenzuela-Toro, Timon Buess, Meike Günter, Amanda M. Gardiner, Pascale Hatt, Geraldine Holdener, Giulia Jacober, Sabrina Kobelt, Sheldon Masseraz, Ian Mehli, Sarah Reiff, Eva Rigendinger, Mimo Ruckstuhl, Santana Schneider, Clarissa Seige, Nathalie Senn, Valeria Staccoli, Jessica Baumann, Livio Flüeler, Lino J. Guevara, Esin Ickin, Kimberley C. Kissling, Janis Rogenmoser, Dominik Spitznagel, Jaime A. Villafaña, and Chiara Zanatta
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megafauna ,species extinction ,body size ,ecosystem function ,ecology ,Evolution ,QH359-425 - Abstract
The modern marine megafauna is known to play important ecological roles and includes many charismatic species that have drawn the attention of both the scientific community and the public. However, the extinct marine megafauna has never been assessed as a whole, nor has it been defined in deep time. Here, we review the literature to define and list the species that constitute the extinct marine megafauna, and to explore biological and ecological patterns throughout the Phanerozoic. We propose a size cut-off of 1 m of length to define the extinct marine megafauna. Based on this definition, we list 706 taxa belonging to eight main groups. We found that the extinct marine megafauna was conspicuous over the Phanerozoic and ubiquitous across all geological eras and periods, with the Mesozoic, especially the Cretaceous, having the greatest number of taxa. Marine reptiles include the largest size recorded (21 m; Shonisaurus sikanniensis) and contain the highest number of extinct marine megafaunal taxa. This contrasts with today’s assemblage, where marine animals achieve sizes of >30 m. The extinct marine megafaunal taxa were found to be well-represented in the Paleobiology Database, but not better sampled than their smaller counterparts. Among the extinct marine megafauna, there appears to be an overall increase in body size through time. Most extinct megafaunal taxa were inferred to be macropredators preferentially living in coastal environments. Across the Phanerozoic, megafaunal species had similar extinction risks as smaller species, in stark contrast to modern oceans where the large species are most affected by human perturbations. Our work represents a first step towards a better understanding of the marine megafauna that lived in the geological past. However, more work is required to expand our list of taxa and their traits so that we can obtain a more complete picture of their ecology and evolution.
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- 2024
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7. Gut microbiome dysbiosis in antibiotic-treated COVID-19 patients is associated with microbial translocation and bacteremia
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Lucie Bernard-Raichon, Mericien Venzon, Jon Klein, Jordan E. Axelrad, Chenzhen Zhang, Alexis P. Sullivan, Grant A. Hussey, Arnau Casanovas-Massana, Maria G. Noval, Ana M. Valero-Jimenez, Juan Gago, Gregory Putzel, Alejandro Pironti, Evan Wilder, Yale IMPACT Research Team, Lorna E. Thorpe, Dan R. Littman, Meike Dittmann, Kenneth A. Stapleford, Bo Shopsin, Victor J. Torres, Albert I. Ko, Akiko Iwasaki, Ken Cadwell, and Jonas Schluter
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Science - Abstract
Here, the authors show that SARS-CoV-2 infection causes gut microbiome dysbiosis and gut epithelial cell alterations in a mouse model, and correlate dysbiosis observed in COVID-19 patients with blood stream infections, matching reads of bacterial sequences from stool samples to organisms found in the blood.
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- 2022
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8. Biological Response Following the Systemic Injection of PEG–PAMAM–Rhodamine Conjugates in Zebrafish
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Beatriz Custódio, Patrícia Carneiro, Joana Marques, Victoria Leiro, Ana M. Valentim, Mafalda Sousa, Sofia D. Santos, José Bessa, and Ana P. Pêgo
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zebrafish ,biocompatibility ,neurotoxicity ,dose response ,systemic injection ,nanobiomaterials ,Pharmacy and materia medica ,RS1-441 - Abstract
Numerous therapeutic and diagnostic approaches used within a clinical setting depend on the administration of compounds via systemic delivery. Biomaterials at the nanometer scale, as dendrimers, act as delivery systems by improving cargo bioavailability, circulation time, and the targeting of specific tissues. Although evaluating the efficacy of pharmacological agents based on nanobiomaterials is crucial, conducting toxicological assessments of biomaterials is essential for advancing clinical translation. Here, a zebrafish larvae model was explored to assess the biocompatibility of poly(amido amine) (PAMAM), one of the most exploited dendrimers for drug delivery. We report the impact of a systemic injection of polyethylene glycol (PEG)-modified G4 PAMAM conjugated with rhodamine (Rho) as a mimetic drug (PEG–PAMAM–Rho) on survival, animal development, inflammation, and neurotoxicity. A concentration- and time-dependent effect was observed on mortality, developmental morphology, and innate immune system activation (macrophages). Significant effects in toxicological indicators were reported in the highest tested concentration (50 mg/mL PEG–PAMAM–Rho) as early as 48 h post-injection. Additionally, a lower concentration of PEG–PAMAM–Rho (5 mg/mL) was found to be safe and subsequently tested for neurotoxicity through behavioral assays. In accordance, no significative signs of toxicity were detected. In conclusion, the dose response of the animal was assessed, and the safe dosage for future use in theragnostics was defined. Additionally, new methodologies were established that can be adapted to further studies in toxicology using other nanosystems for systemic delivery.
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- 2024
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9. Susceptibility to endemic Aedes‐borne viruses among pregnant women in Risaralda, Colombia
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Jaime A. Cardona-Ospina, Adriana M. Trujillo, Erika V. Jiménez-Posada, Juan C. Sepúlveda-Arias, Fredy A. Tabares-Villa, Joanne S. Altieri-Rivera, Alejandro Monsalve, Juliana Restrepo-Chica, Daniela Osorio, Daniel Espinoza, Yerun Zhu, Juan D. Castrillón-Spitia, Valentina Henao-SanMartin, David R. Murillo-Garcia, Natalia Millán, Sandra X. Olaya, Ana M. Valencia-Montoya, Hugo A. Bedoya-Arias, Rhuvi Villamizar-Peña, Estefanía Gutierrez-Ocampo, Yeimer Holguin-Rivera, Isabella Cortés-Bonilla, Maria C. Cardona-Trujillo, Alejandra García-Barco, D. Katterine Bonilla-Aldana, Guillermo J. Lagos-Grisales, Alfonso J. Rodríguez-Morales, and Matthew H. Collins
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Dengue ,Zika ,Chikungunya ,Aedes-borne viruses ,Seroprevalence ,Pregnancy ,Infectious and parasitic diseases ,RC109-216 - Abstract
Objectives: Aedes-borne viruses (ABV) affect humans on every inhabited continent and frequently cause epidemics. Recent epidemics of chikungunya and Zika viruses (ZIKV) highlight that preparedness for future epidemics requires assessment of susceptibility, particularly among high-risk groups. We sought to determine immunity against the three major circulating ABV among pregnant women in an ABV-endemic area of Colombia. Methods: A cross-sectional seroprevalence study was performed, enrolling women presenting to Labor and Delivery. Cord blood and maternal peripheral blood samples were obtained. IgG seroprevalence to flaviviruses and chikungunya was determined by ELISA. An abbreviated neutralization test was used to estimate the frequency and magnitude of immunity to Zika and four dengue serotypes. Cluster analyses explored epidemiologic factors associated with seroprevalence. Results: Most women exhibited high levels of neutralizing antibodies to one or more ABV; however, nearly 20% were seronegative for flaviviruses. Our research took place after the epidemic peak of the ZIKV outbreak in Colombia in 2016. However, only 20% of pregnant women had high levels of Zika-neutralizing antibodies consistent with likely protective immunity to ZIKV. Conclusion: Hence, a high proportion of pregnant women in Risaralda remain susceptible to one or more ABV including the teratogenic ZIKV, indicating a risk for future epidemics in this region.
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- 2022
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10. New data from the first discovered paleoparadoxiid (Desmostylia) specimen shed light into the morphological variation of the genus Neoparadoxia
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Kumiko Matsui, Ana M. Valenzuela-Toro, and Nicholas D. Pyenson
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Medicine ,Science - Abstract
Abstract Desmostylia is an extinct clade of marine mammals with two major sub-clades, Desmostylidae and Paleoparadoxiidae, known from Oligocene to Miocene strata of the North Pacific coastline. Within Paleoparadoxiidae, three genera have been identified: Archaeoparadoxia, Paleoparadoxia, and Neoparadoxia. The latter taxon is the geochronologically youngest palaeoparadoxiid and Neoparadoxia is characterized by a comparatively larger body size, although it is known only from a few specimens within a short temporal and geographic range. Here we report the discovery of an isolated tooth, which we identify as Neoparadoxia cf. N. cecilialina, constituting only the second individual specimen of Neoparadoxia with preserved dentition yet reported. This specimen was collected near Corona, California, USA, and we attribute it to the “Topanga” Formation, extending the geographic range of this taxon in Southern California. While the exact geographic locality was not recorded when it was collected in 1913, we establish two potential localities based on associated hand-written museum label and new stratigraphic information. Although initially identified as Desmostylus hesperus, this specimen of Neoparadoxia was collected 10 years before the first named paleoparadoxiid from Japan. We expect that description of more complete desmostylian material from elsewhere in Southern California will clarify the taxonomic richness and paleoecological role of this clade in Cenozoic marine mammal assemblages.
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- 2022
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11. Complementary roles of wild boar and red deer to animal tuberculosis maintenance in multi-host communities
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Nuno Santos, Elisa Ferreras Colino, María Cruz Arnal, Daniel Fernández de Luco, Iker Sevilla, Joseba M. Garrido, Eliana Fonseca, Ana M. Valente, Ana Balseiro, João Queirós, Virgílio Almeida, Joaquín Vicente, Christian Gortázar, and Paulo Célio Alves
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Mycobacterium bovis ,Mycobacterium tuberculosis complex ,Bovine tuberculosis ,Basic reproduction number ,R0 ,Sus scrofa ,Infectious and parasitic diseases ,RC109-216 - Abstract
The contribution of wildlife species to pathogen maintenance in multi-host communities has seldom been quantified. To assess the relative contribution of the main wildlife hosts of animal tuberculosis (TB) to its maintenance, we estimated the basic reproduction number (R0) of Mycobacterium tuberculosis complex in wild boar and red deer at 29 sites in the Iberian Peninsula. Host abundance and true TB prevalence were estimated for each species at each site by sampling from distributions incorporating the uncertainty in the proportion of the population harvested each year, sensitivity, and specificity of the diagnostic methods, while excretion of mycobacteria was estimated using site-occupancy models. The distributions of these parameters were then used to estimate, at each site, the R0,wild boar (range 0.1 – 55.9, average 8.7, standard deviation 11.8), and the R0,red deer (0.1 – 18.9, 2.2, 3.9). Animal TB is maintained in epidemiological scenarios ranging from any single species acting as a maintenance host (the wild boar in 18 sites and the red deer in 5), to facultative multi-host disease (6 sites). The prevalence of TB in the red deer is likely an important driver of the epidemiology in multi-host communities. The wild boar was the main maintenance host of TB in most of the study sites and could have an epidemiological role linking the wildlife multi-host community and livestock.
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- 2022
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12. Mangroves From Rainy to Desert Climates: Baseline Data to Assess Future Changes and Drivers in Colombia
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Juan F. Blanco-Libreros, Sara R. López-Rodríguez, Ana M. Valencia-Palacios, Gloria Fabiola Perez-Vega, and Ricardo Álvarez-León
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forest inventory ,Biogeographic Chocó ,neotropics ,arid regions ,wettest mangroves ,northern South America ,Forestry ,SD1-669.5 ,Environmental sciences ,GE1-350 - Published
- 2022
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13. Housing Conditions Affect Adult Zebrafish (Danio rerio) Behavior but Not Their Physiological Status
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Sara Jorge, Luís Félix, Benjamín Costas, and Ana M. Valentim
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zebrafish ,environmental enrichment ,cortisol ,behavior ,skin mucus ,welfare ,Veterinary medicine ,SF600-1100 ,Zoology ,QL1-991 - Abstract
Zebrafish is a valuable model for neuroscience research, but the housing conditions to which it is exposed daily may be impairing its welfare status. The use of environmental enrichment and the refinement of methodology for cortisol measurement could reduce stress, improving its welfare and its suitability as an animal model used in stress research. Thus, this study aimed to evaluate (I) the influence of different housing conditions on zebrafish physiology and behavior, and (II) skin mucus potential for cortisol measurement in adult zebrafish. For this, AB zebrafish were raised under barren or enriched (PVC pipes and gravel image) environmental conditions. After 6 months, their behavior was assessed by different behavioral paradigms (shoaling, white-black box test, and novel tank). The physiological response was also evaluated through cortisol levels (whole-body homogenates and skin mucus) and brain oxidative stress markers. The results revealed that enriched-housed fish had an increased nearest neighbors’ distance and reduced activity. However, no effect on body length or stress biomarkers was observed; whole-body and skin mucus cortisol levels had the same profile between groups. In conclusion, this study highlights the skin mucus potential as a matrix for cortisol quantification, and how housing conditions could influence the data in future studies.
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- 2023
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14. Behavioural Aversion and Cortisol Level Assessment When Adult Zebrafish Are Exposed to Different Anaesthetics
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Jorge M. Ferreira, Sara Jorge, Luís Félix, Gabriela M. Morello, I. Anna S. Olsson, and Ana M. Valentim
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anaesthesia ,refinement ,aversion ,cortisol ,zebrafish ,Biology (General) ,QH301-705.5 - Abstract
The use of zebrafish (Danio rerio) as an animal model is growing and occurs in a wide range of scientific areas. Therefore, researchers need better and more appropriate anaesthetics for stressful and/or painful procedures to prevent unpleasant experiences. Thus, we aimed to study if adult zebrafish displayed aversion-associated behaviours (conditioned place aversion) and alterations in cortisol levels when exposed to equipotent concentrations of MS222, propofol/lidocaine, clove oil, or etomidate. Adult AB zebrafish (mixed-sex, N = 177) were randomly assigned to MS222 (150 mg/L), Propofol/Lidocaine (5 mg/L propofol + 150 mg/L lidocaine), Clove Oil (45 mg/L), or Etomidate (2 mg/L) groups. The conditioned place aversion test was used to assess behavioural aversion. Only etomidate resulted in a similar aversion to the positive control group (HCl; pH = 3). Cortisol levels were measured 5 and 15 min after loss of equilibrium. Etomidate induced low levels of cortisol by impairing its synthesis, whereas all the other groups had similar cortisol levels. Based on our data, etomidate was ruled out as an alternative to MS222, as it showed an aversive profile. The remaining protocols were not innocuous, displaying a weak aversive profile when compared to the positive control. In conclusion, a combination of propofol with lidocaine, clove oil, and MS222 were valid candidates for use as anaesthetic protocols.
- Published
- 2022
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