27 results on '"Ying Xu"'
Search Results
2. The structural, electronic properties, pressure response and decomposition mechanism of bispentazole (N10) with first principles calculations
- Author
-
Qin, Han, Li, Fei, Zhou, Ying-Xu, Li, Hui-Dong, Liu, Fu-Sheng, Liu, Zheng-Tang, and Liu, Qi-Jun
- Published
- 2023
- Full Text
- View/download PDF
3. Tetrahedral DNA probe coupling with hybridization chain reaction for competitive thrombin aptasensor
- Author
-
Chen, Ying-Xu, Huang, Ke-Jing, He, Liu-Liu, and Wang, Yi-Han
- Published
- 2018
- Full Text
- View/download PDF
4. Recent advances in signal amplification strategy based on oligonucleotide and nanomaterials for microRNA detection-a review
- Author
-
Chen, Ying-Xu, Huang, Ke-Jing, and Niu, Ke-Xin
- Published
- 2018
- Full Text
- View/download PDF
5. Au nanoparticles/hollow molybdenum disulfide microcubes based biosensor for microRNA-21 detection coupled with duplex-specific nuclease and enzyme signal amplification
- Author
-
Shuai, Hong-Lei, Huang, Ke-Jing, Chen, Ying-Xu, Fang, Lin-Xia, and Jia, Meng-Pei
- Published
- 2017
- Full Text
- View/download PDF
6. Ultrasensitive electrochemical sensing platform for microRNA based on tungsten oxide-graphene composites coupling with catalyzed hairpin assembly target recycling and enzyme signal amplification
- Author
-
Shuai, Hong-Lei, Huang, Ke-Jing, Xing, Ling-Li, and Chen, Ying-Xu
- Published
- 2016
- Full Text
- View/download PDF
7. Application of non-Gaussian feature enhancement extraction in gated recurrent neural network for fault detection in batch production processes.
- Author
-
Peng, Chang, Ying, Xu, ShanQi, Shi, and ZiYun, Fang
- Subjects
- *
BATCH processing , *FEATURE extraction , *MANUFACTURING processes , *RECURRENT neural networks , *INDEPENDENT component analysis , *ORDER statistics - Abstract
The nonlinear, time correlation, and non-Gaussian features in data present significant challenges for effective fault detection. While the Gate Recurrent Unit (GRU) network is renowned for its capacity to manage time correlation, it falls short in capturing non-Gaussian features in process data, which can likely lead to suboptimal monitoring results. To address this limitation, the Enhancement Gate Recurrent Unit (ENGRU) is developed to perfect the fault detection accuracy of the network. Specifically, The ENGRU effectively extracts high order statistics information by employing the overcompleted independent component analysis method, thereby augmenting its ability to capture non-Gaussian properties. The extracted features information are then entered into the ENGRU model further to uncover additional hidden features beyond what the GRU can achieve. The ENGRU network, which is built upon the extracted characteristic information, even farther enhances the accuracy of the fault detection. The merits of the proposed model are demonstrated by comparing it with excellent fault detection algorithms on a benchmark platform. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
8. Efficient fault monitoring in wastewater treatment processes with time stacked broad learning network.
- Author
-
Peng, Chang, Ying, Xu, and FanChao, Meng
- Subjects
- *
WASTEWATER treatment , *DEEP learning - Abstract
Process monitoring models play an increasingly indispensable role in promptly differentiating faults within the wastewater treatment process to maintain a safe state. The accuracy and time overhead are crucial indicators in judging whether models results are excellent or not. In terms of accuracy, deep learning methods excel, because of their generalized approximation and strong learning capabilities that enable them to infinitely approach an ideal level of monitoring accuracy. Meanwhile, they also have large computational loads that generates significant time overhead, which poses challenges for real-time monitoring of the wastewater treatment process. Hence, a novel process monitoring method called Time-Stacked Broad Learning System (Time-SBLS) is developed to alleviate these concerns in an effective and accurate manner. Time-SBLS leverages the efficiency of the BLS while incorporating the residual mechanism and time lag idea to capture necessary nonlinear features and time correlation associated with the fault detection accuracy better. Furthermore, another advantage of Time-SBLS is its inherited efficiency from BLS regarding time overhead, which is minimized by utilizing the pseudo-inverse technique to calculate weight parameters. Experimental findings on the Benchmark platform reveal that Time-SBLS offers considerable advantages in terms of accuracy and network time overhead compared to other state-of-the-art approaches. • Time-SBLS is applied for the first time to the wastewater treatment process. • Time-SBLS model can achieve satisfactory monitoring accuracy. • Time-SBLS overcomes the limitations of some deep learning networks. • Time-SBLS is compatible with accuracy and time overhead simultaneously. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
9. Electrochemical biosensor based on Se-doped MWCNTs-graphene and Y-shaped DNA-aided target-triggered amplification strategy.
- Author
-
Wang, Yi-Han, Chen, Ying-Xu, Wu, Xu, and Huang, Ke-Jing
- Subjects
- *
GRAPHENE , *ELECTROCHEMICAL sensors , *MULTIWALLED carbon nanotubes , *GENE amplification , *QUADRUPLEX nucleic acids - Abstract
Graphical abstract Highlights • Se doping MWCNTs-graphene hybrids are prepared and used for supporting substrate. • Y-shaped DNA-aided target recycling signal amplification and hemin/G-quadruplex is used for signal amplification. • The biosensor used for PDGF-BB detection shows linear range of 0.1 pM-10 nM and detection limit of 27 fM. Abstract A highly sensitive electrochemical biosensor for detection of platelet-derived growth factor-BB (PDGF-BB) is developed by using Se-doped multi-walled carbon nanotubes (MWCNTs)-graphene hybrids as electrode supporting substrate, hemin/G-quadruplex as trace labels and Y-shaped DNA-aided target recycling as signal magnifier. The aptamer-containing hairpin probes were first immobilized on the electrode. When target PDGF-BB was added, the aptamer binded PDGF-BB to trigger catalytic assembly of two other hairpins to form many G-quadruplex Y-junction DNA structures, which released PDGF-BB to again bind the intact aptamer to initiate another assembly cycle. G-quadruplex/hemin complexes were produced when hemin was added to generate substantially amplified current output. The developed assay showed a linear range toward PDGF-BB from 0.1 pM to 10 nM with a detection limit of 27 fM (S/N = 3). The method showed excellent specificity and repeatability, and could be expediently applied for sensitive detection of other molecules by simply changing the aptamers. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
10. Effects of sandstone mineral composition heterogeneity on crack initiation and propagation through a microscopic analysis technique.
- Author
-
Shuai, Wang, Ying, Xu, Yanbo, Zhang, Xulong, Yao, Peng, Liang, and Xiangxin, Liu
- Subjects
- *
CRACK propagation (Fracture mechanics) , *MICROSCOPY , *MINERALS , *SANDSTONE , *FRACTOGRAPHY , *CLAY minerals - Abstract
Crack initiation and propagation are key scientific questions influencing rock failure. To study crack initiation and propagation during rock failure, CT scanning tests were performed on the sandstone samples. The initiation and propagation stages of sandstone cracks were analysed based on a reconstructed three-dimensional crack structure model. The types of crack initiation and propagation in minerals and the effects of mineral composition heterogeneity on crack initiation and propagation were studied using microscopic analytical techniques. The effect of mineral granularity on crack initiation and propagation was analysed using statistical methods. The results show that crack initiation and propagation can be divided into four stages: microcrack inoculation, mesocrack initiation, mesocrack evolution to macrocrack, and macrocrack penetration. Four cracks are formed at different locations, extending along the mineral edge, deflecting at the mineral edge, bifurcating at the mineral edge, and penetrating through the mineral. The poikilitic texture formed by quartz debris and cement makes it easy for cracks to extend along the mineral edges. In quartz debris with high crystallinity, the crack tends to deflect and bifurcate at the edge of quartz debris. The symbiotic structure of altered quartz and clay minerals easily causes cracks to propagate through the minerals. Furthermore, the distribution of mineral granularity affects crack initiation and propagation. The inhomogeneity of mineral granularity can easily cause the initiation and propagation of cracks. The size of the mineral granularity affects the width of the secondary crack. These research results can provide a basis and reference for predicting and evaluating the stability of rock masses. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
11. Whole-grain intake and total, cardiovascular, and cancer mortality: a systematic review and meta-analysis of prospective studies.
- Author
-
Guo-Chong Chen, Xing Tong, Jia-Ying Xu, Shu-Fen Han, Zhong-Xiao Wan, Jia-Bi Qin, and Li-Qiang Qin
- Subjects
CARDIOVASCULAR disease related mortality ,CONFIDENCE intervals ,DOSE-response relationship in biochemistry ,GRAIN ,MEDICAL information storage & retrieval systems ,MEDLINE ,META-analysis ,MORTALITY ,ONLINE information services ,TUMORS ,SYSTEMATIC reviews ,EVIDENCE-based medicine ,PROFESSIONAL practice ,RELATIVE medical risk - Abstract
Background: The potential role of whole grain in preventing various mortality outcomes has been inconsistently reported in a wealth of prospective observational studies. Objective: We evaluated the relations between whole-grain intake and risks of dying from any cause, cardiovascular disease (CVD), and cancer through a meta-analytic approach. Design: Relevant studies were identified by searching PubMed and EMBASE databases and bibliographies of retrieved full publications. Summary RRs with 95% CIs were calculated with a random-effects model. Results: Thirteen studies on total mortality (104,061 deaths), 12 on CVD mortality (26,352 deaths), and 8 on cancer mortality (34,797 deaths) were included. Three studies reported whole-grain intake, and the remaining studies reported whole-grain product intake. In the dose-response analysis in which the intake of whole-grain products was converted to the amount of whole grain, the summary RRs for an increment in whole-grain intake of 50 g/d were 0.78 (95% CI: 0.67, 0.91) for total mortality, 0.70 (95% CI: 0.61, 0.79) for CVD mortality, and 0.82 (95% CI: 0.69, 0.96) for cancer mortality. A similar reduction was observed for the mortality from ischemic heart disease (RR: 0.68; 95% CI: 0.55, 0.84) but not from stroke (RR: 0.93; 95% CI: 0.54, 1.62). There was evidence of nonlinear associations of whole-grain intake with total (P-nonlinearity < 0.001) and CVD mortality (P-nonlinearity <0.001), but not with cancer mortality (P-nonlinearity = 0.12), with the curves for the associations appearing slightly steeper at lower ranges (<35 g/d) of the intake than at higher ranges. Conclusions: Our findings suggest significant inverse relations between whole-grain intake and mortality due to any cause, CVD, or cancer. The findings support the recommendation of increasing whole-grain intake to improve public health. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
12. Higher Erythrocyte n-3 PUFAs Are Associated with Decreased Blood Pressure in Middle-Aged and Elderly Chinese Adults.
- Author
-
Fang-fang Zeng, Li-li Sun, Yan-hua Liu, Ying Xu, Ke Guan, Wen-hua Ling, and Yu-ming Chen
- Subjects
ERYTHROCYTES ,FATTY acids ,BLOOD pressure ,TRIGLYCERIDES ,BODY mass index ,UNSATURATED fatty acids ,UNSATURATED fatty acids in human nutrition - Abstract
Previous studies suggested that blood fatty acids (FAs) might affect blood pressure (BP), but the findings have been inconclusive. This study evaluated the cross-sectional and prospective associations of erythrocyte FAs with BP in middle-aged and elderly Chinese individuals. Between 2008 and 2010, 1834 participants (1364 women and 470 men) aged 57 ± 5 y had baseline measurements taken of their erythrocyte FAs and BP. A total of 1477 participants (1103 women and 374 men) had their BP measured again after 3.09 ± 0.32 y (range: 2.91-3.26 y). In the cross-sectional analyses (n = 1834), the erythrocyte saturated FA (SFA) content was positively associated with BP, whereas total cis polyunsaturated FAs (PUFAs), their subtypes cis n-3 (ω-3) PUFAs and cis n-6 (ω-6) PUFAs, and the PUFA-to-SFA ratio were inversely associated with BP (all P-trends < 0.05). The longitudinal results (n = 1477) showed marginally inverse associations between cis n-3 PUFAs and the n-3:n-6 PUFA ratio and BP. For individual cis n-3 PUFAs, higher contents of 20:5n-3, 22:5n-3, and 22:6n-3 were significantly associated with reduced increases in SBP over time (the mean change range between quartile 4 and quartile 1 was -0.917 to -0.749 mm Hg for SBP; all P-trends < 0.01), and 20:5n-3 was inversely associated with DBP change (the mean change between quartile 4 and quartile 1 was -0.631; P-trend < 0.001). Path analyses suggested that the associations between cis n-3 PUFAs and BP might be mediated by decreasing serum triglycerides (TGs) and body mass index (BMI). Our findings revealed that a higher content of cis n-3 PUFAs (mainly very long-chain cis n-3 PUFAs) may benefit BP progress, probably mediated by decreasing serum TGs and BMI. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
13. Can financial marketization mitigate the negative effect of exchange rate fluctuations on exports? Evidence from Chinese regions.
- Author
-
Lucey, Brian, Xiaoxue, Wang, Yanfang, Wang, and Ying, Xu
- Abstract
• Chinese financial marketization has been fast and deep but its breadth has been heterogeneous. • We examine the degree of financial marketization and its interaction with provincial real effective exchange rates. • We also show how these real effective exchange rates and financial marketization interact with regard to export performance. A lot of research has been undertaken on the relationship between exchange rate fluctuation and export. On this basis, this paper considers the moderating effect of financial marketization on the relationship between them, and shifts the research perspective to the provincial level. Using quarterly inter-provincial panel data from 2006 to 2017, this paper focuses on whether financial marketization can weaken the negative effect of exchange rate volatility on export. The conclusions are as follows: at the national level, the depreciation of the inter provincial effective exchange rate in the current period can promote export growth in the next period, while exchange rate volatility will inhibit the next period exports. Financial marketization can mitigate the negative effect of exchange rate volatility on exports. We do however find regional differences in the intensity of these relationships. This study provides empirical evidence for accelerating the reform of financial marketization, steadily promoting the formation mechanism of RMB exchange rate and balancing the development of regional trade. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
14. The optimal allocation of H-SFCL in MVDC SPS.
- Author
-
Zheng, Li, Li, Ren, Ying, Xu, Shuqiang, Guo, Jing, Shi, Jingdong, Li, and Yuejin, Tang
- Subjects
- *
SUPERCONDUCTING fault current limiters , *ATHLETIC tape , *STRUCTURAL optimization , *CURRENT limiters , *FAULT current limiters , *SUPERCONDUCTING coils , *FAULT currents - Abstract
• An experiment for comparison of three different current limiting topologies is conducted. For the same tape consumption of 17 m, the limiting rates of R-SFCL, FC-SFCL and H-SFCL are 10 %, 28 % and 58 % respectively within the DC voltage range of 240–440 V. Both FC-SFCL and H-SFCL have good current limiting effect. Compared with FC-SFCL, the H-SFCL has stronger flexibility and adaptability, and there is no quenching recovery time, which makes it better cooperate with the DC circuit breaker to realize automatic reclosing. Therefore, H-SFCL is the most suitable superconducting current limiter for MVDC SPS. • This paper puts forward an optimal allocation method of H-SFCL on MVDC SPS. To solve the problem of optimizing the number and position of current limiters, a dual objective hierarchical optimization configuration method is proposed with the goal of minimizing the maximum allowable current and inductance energy of circuit breakers. The optimization of the number, position, and internal component parameters of current limiters is achieved on a four-terminal system. The results show that the proposed hierarchical optimization configuration method can effectively achieve the optimization of position and component parameters. • An improved four objective optimal allocation method suitable for circuit breakers and H-SFCLs is proposed to address the issue of the breaking sequence between the internal switch in H-SFCL and the external circuit breaker. The results showed that the maximum effective individual ratio within the first 20 generations of improvement was 88%; The improved iteration speed has significantly increased, and the effective individual ratio in the 5th generation can reach 100%, effectively improving the effective individual ratio in the optimization iteration process and achieving overall optimization of isolation and current limiting equipment. Medium voltage direct current shipboard power system (MVDC SPS) is the development trend of navy in the future. At present, one of the bottlenecks restricting the development of MVDC SPS is that the short fault. There is a lack of effective means to limit short fault current to protect MVDC SPS. This paper presents a method of applying a hybrid type superconducting fault current limiter (H-SFCL) to MVDC SPS protection. The architecture and system modeling of MVDC SPS are introduced, and the mechanism of bipolar DC short fault is analyzed. The topology and working principle of H-SFCL are introduced. The small-scale prototype experiment is done, the current limiting effect of H-SFCL is compared with resistive type superconducting fault current limiter (R-SFCL) and flux-coupling type superconducting fault current limiter (FC-SFCL) in the prototype test, so as to verify the superiority of H-SFCL. A dual objective hierarchical optimization configuration method is proposed, and the number and position of H-SFCLs are verified on a four-terminal system, as well as multi-objective optimization for H-SFCLs. A fault isolation and H-SFCL optimal allocation evaluation model is proposed; An improved method suitable for fault isolation and multi-objective optimal allocation of H-SFCLs is proposed to address the issue of breaking timing between internal switches in H-SFCLs and external circuit breakers in the optimization process. The research results indicate that the proposed optimal allocation method can optimize the inductance, resistance, and switch breaking time inside the current limiter, and can match the timing with the external circuit breaker; The proposed multi-objective optimization configuration method has a maximum effective individual ratio of 88% in the first 20 generations of improvement, and the improved iteration speed has significantly increased. In the 5th generation, the effective individual ratio can reach 100%. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
15. Mucosal recombinant BCG vaccine induces lung-resident memory macrophages and enhances trained immunity via mTORC2/HK1-mediated metabolic rewiring.
- Author
-
Xiaofei Peng, Yuting Zhou, Baoying Zhang, Xiaotong Liang, Jingyu Feng, Yuejun Huang, Shufeng Weng, Ying Xu, and Haibo Su
- Subjects
- *
BCG vaccines , *IMMUNOLOGIC memory , *IMMUNITY , *ALVEOLAR macrophages , *T cells , *NATURAL immunity , *T helper cells , *TUBERCULOSIS in cattle - Abstract
Bacillus Calmette-Guérin (BCG) vaccination induces a type of immune memory known as "trained immunity", characterized by the immunometabolic and epigenetic changes in innate immune cells. However, the molecular mechanism underlying the strategies for inducing and/or boosting trained immunity in alveolar macrophages remains unknown. Here, we found that mucosal vaccination with the recombinant strain rBCGPPE27 significantly augmented the trained immune response in mice, facilitating a superior protective response against Mycobacterium tuberculosis and non-related bacterial reinfection in mice when compared to BCG. Mucosal immunization with rBCGPPE27 enhanced innate cytokine production by alveolar macrophages associated with promoted glycolytic metabolism, typical of trained immunity. Deficiency of the mammalian target of rapamycin complex 2 and hexokinase 1 abolished the immunometabolic and epigenetic rewiring in mouse alveolar macrophages after mucosal rBCGPPE27 vaccination. Most noteworthy, utilizing rBCGPPE27's higher-up trained effects: The single mucosal immunization with rBCGPPE27-adjuvanted coronavirus disease (CoV-2) vaccine raised the rapid development of virus-specific immunoglobulin G antibodies, boosted pseudovirus neutralizing antibodies, and augmented T helper type 1-biased cytokine release by vaccine-specific T cells, compared to BCG/CoV-2 vaccine. These findings revealed that mucosal recombinant BCG vaccine induces lung-resident memory macrophages and enhances trained immunity via reprogramming mTORC2- and HK-1-mediated aerobic glycolysis, providing new vaccine strategies for improving tuberculosis (TB) or coronavirus variant vaccinations, and targeting innate immunity via mucosal surfaces. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
16. Free and forced vibrations of nanowires on elastic substrates.
- Author
-
Su, Guang-Yuan, Li, Xiang-Yu, Li, Ying-Xu, and Müller, Ralf
- Subjects
- *
NANOWIRES , *GROUND-effect machines , *VIBRATION (Mechanics) , *LAPLACE transformation , *NUMERICAL calculations - Abstract
This work aims to study the free and forced transverse vibrations of a nanowire on elastic substrate, in a systematic way. To this end, the governing equations are obtained from an updated mechanical model integrating the effects of surface and elastic substrate. The Winkler, Pasternak and Generalized substrate models are taken into consideration to characterize various substrates. The characteristic equations, mode shapes and effective Young’s moduli are determined for nanowires with three typical boundary conditions: simply supported, clamped-clamped and clamped-free. The Laplace transform is employed to derive the exact solutions for forced vibrations of the three typical nanowires. Numerical calculations are performed to validate the proposed solutions and to analyze the effects of surface and elastic substrates on the free and forced vibrations. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
17. Disruption of the glucagon receptor increases glucagon expression beyond α-cell hyperplasia in zebrafish.
- Author
-
Qi Kang, Jihong Zheng, Jianxin Jia, Ying Xu, Xuanxuan Bai, Xinhua Chen, Xiao-Kun Zhang, Wong, F. Susan, Chao Zhang, and Mingyu Li
- Subjects
- *
HYPERPLASIA , *BRACHYDANIO , *TRANSCRIPTION factors , *IN situ hybridization , *GLUCAGON-like peptide-1 receptor , *GLUCAGON , *GLUCAGON receptors - Abstract
The glucagon receptor (GCGR) is a potential target for diabetes therapy. Several emerging GCGR antagonism-based therapies are under preclinical and clinical development. However, GCGR antagonism, as well as genetically engineered GCGR deficiency in animal models, are accompanied by α-cell hyperplasia and hyperglucagonemia, which may limit the application of GCGR antagonism. To better understand the physiological changes in α cells following GCGR disruption, we performed single cell sequencing of α cells isolated from control and gcgr-/- (glucagon receptor deficient) zebrafish. Interestingly, beyond the α-cell hyperplasia, we also found that the expression of gcga, gcgb, pnoca, and several glucagon-regulatory transcription factors were dramatically increased in one cluster of gcgr-/- α cells. We further confirmed that glucagon mRNA was upregulated in gcgr-/- animals by in situ hybridization and that glucagon promoter activity was increased in gcgr-/-;Tg(gcga:GFP) reporter zebrafish. We also demonstrated that gcgr-/- α cells had increased glucagon protein levels and increased granules after GCGR disruption. Intriguingly, the increased mRNA and protein levels could be suppressed by treatment with high-level glucose or knockdown of the pnoca gene. In conclusion, these data demonstrated that GCGR deficiency not only induced α-cell hyperplasia but also increased glucagon expression in α cells, findings which provide more information about physiological changes in α-cells when the GCGR is disrupted. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
18. Age-dependent changes in cuticular hydrocarbons of larvae in Aldrichina grahami (Aldrich) (Diptera: Calliphoridae).
- Author
-
Hong Xu, Gong-Yin Ye, Ying Xu, Cui Hu, and Guang-Hui Zhu
- Subjects
- *
BLOWFLIES , *DIPTERA , *CARRION insects , *HYDROCARBONS , *LARVAE - Abstract
Necrophagous flies, comprising the first wave of insects present in a cadaver, provide a great potential for more accurate determination of the late postmortem interval (PMI) based on their age. Cuticular hydrocarbons (CHs) are a promising age indicator in some insect species, especially for the larvae of necrophagous flies. Gas chromatography (GC) and gas chromatography-mass spectrometry (GC-MS) were used to characterize the age-dependent, quantitative changes in CHs of larval Aldrichina grahami (Aldrich) (Diptera: Calliphoridae) at 24 8C. The majority of low-molecular-weight alkanes (⩽C25) and almost all of the alkenes decreased in abundance with larval development. By contrast, the abundance of high-molecular-weight alkanes of chain length greater than C25 gradually increased with age. For several peaks, including peak 28 (pentacosene a), peak 31 (n-C25), peak 43 (n-C27) and peak 68 (n-C31), a highly significant correlation was found between peak ratio (n-C29 divided by each chromatographic peak) and chronological age of the larvae. A mathematical model, derived from multivariate linear regression analysis, was developed for determining age of the larvae based on age-dependent changes in CHs. The estimated larval age based on the CHs had a good linear correlation with the chronological age (R2 > 0.9). These results indicate that CHs has a great potential for determining the age of fly larvae, and concomitantly for the PMI in forensic investigation. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
19. Ubiquitin-conjugating enzyme UBE2O regulates cellular clock function by promoting the degradation of the transcription factor BMAL1.
- Author
-
Suping Chen, Jing Yang, Yang Zhang, Chunyan Duan, Qing Liu, Zhengyun Huang, Ying Xu, Liang Zhou, and Guoqiang Xu
- Subjects
- *
UBIQUITIN genetics , *CELLULAR mechanics , *CHEMICAL decomposition , *TRANSCRIPTION factors , *OSTEOSARCOMA , *PATIENTS - Abstract
Dysregulation of the circadian rhythm is associated with many diseases, including diabetes, obesity, and cancer. Aryl hydrocarbon receptor nuclear translocator-like protein 1 (Arntl or Bmal1) is the only clock gene whose loss disrupts circadian locomotor behavior in constant darkness. BMAL1 levels are affected by proteasomal inhibition and by several enzymes in the ubiquitin--proteasome system, but the exact molecular mechanism remains unclear. Here, using immunoprecipitation and MS analyses, we discovered an interaction between BMAL1 and ubiquitin-conjugating enzyme E2 O (UBE2O), an E3-independent E2 ubiquitin--conjugating enzyme (i.e. hybrid E2/E3 enzyme). Biochemical experiments with cell lines and animal tissues validated this specific interaction and uncovered that UBE2O expression reduces BMAL1 levels by promoting its ubiquitination and degradation. Moreover, UBE2O expression/ knockdown diminished/increased, respectively, BMAL1-mediated transcriptional activity but did not affect BMAL1 gene expression. Bioluminescence experiments disclosed that UBE2O knockdown elevates the amplitude of the circadian clock in human osteosarcoma U2OS cells. Furthermore, mapping of the BMAL1-interacting domain in UBE2O and analyses of BMAL1 stability and ubiquitination revealed that the conserved region 2 (CR2) in UBE2O significantly enhances BMAL1 ubiquitination and decreases BMAL1 protein levels. A Cys-to-Ser substitution experiment identified the critical Cys residue in theCR2domain responsible for BMAL1 ubiquitination. This work identifies UBE2O as a critical regulator in the ubiquitin--proteasome system, which modulates BMAL1 transcriptional activity and circadian function by promoting BMAL1 ubiquitination and degradation under normal physiological conditions. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
20. Mycobacterium tuberculosis PPE60 antigen drives Th1/Th17 responses via Toll-like receptor 2–dependent maturation of dendritic cells.
- Author
-
Haibo Su, Zhen Zhang, Zijian Liu, Baozhou Peng, Cong Kong, Honghai Wang, Zhi Zhang, and Ying Xu
- Subjects
- *
MYCOBACTERIUM tuberculosis , *TOLL-like receptors , *DENDRITIC cells , *T helper cells , *TUBERCULOSIS vaccines , *DRUG development , *PHYSIOLOGY - Abstract
Targeting of Mycobacterium tuberculosis (MTB) PE/PPE antigens that induce type 1 helper T cell (Th1) and Th17 responses represents a crucial strategy for the development of tuberculosis (TB) vaccines. However, only a few PE/PPE antigens induce these responses. Here, we sought to determine how the cell wall–associated antigen PPE60 (Rv3478) activates dendritic cell (DC) maturation and T-cell differentiation. We observed that PPE60 induces DC maturation by augmenting the protein expression of cluster of differentiation 80 (CD80) and CD86 and major histocompatibility complex (MHC) class I and MHC class II on the cell surface. PPE60 also stimulated the production of tumor necrosis factor-α (TNFα), interleukin (IL)-1β, IL-6, IL-12p70, and IL-23p19 but not IL-10. This induction was mediated by Toll-like receptor 2 (TLR2) and followed by activation of p38, c-Jun N-terminal kinase (JNK), and NF-κB signaling. PPE60 enhanced MHC-II expression and promoted antigen processing by DCs in a TLR2-dependent manner. Moreover, PPE60-stimulated DCs directed naïve CD4+ T cells to produce IFN-γ, IL-2, and IL-17A, expanding the Th1 and Th17 responses, along with activation of T-bet and RAR-related orphan receptor C (RORγt) but not GATA-3. Moreover, PPE60 activated the NLRP3 inflammasome followed by caspase-1–dependent IL-1β and IL-18 synthesis in DCs. Of note, pharmacological inhibition of NLRP3 activation specifically attenuated IFN-γ and IL-17A secretion into the supernatant from CD4+ T cells cocultured with PPE60-activated DCs. These findings indicate that PPE60 induces Th1 and Th17 immune responses by activating DCs in a TLR2-dependent manner, suggesting PPE60's potential for use in MTB vaccine development [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
21. Correlated evolution between CK1δ Protein and the Serine-rich Motif Contributes to Regulating the Mammalian Circadian Clock.
- Author
-
Lijuan Xing, Yang An, Guangsen Shi, Jie Yan, Pancheng Xie, Zhipeng Qu, Zhihui Zhang, Zhiwei Liu, Dejing Pan, and Ying Xu
- Subjects
- *
CASEIN kinase , *SERINE , *CIRCADIAN rhythms , *BIOLOGICAL evolution , *GENETIC mutation - Abstract
Understanding the mechanism underlying the physiological divergence of species is a long-standing issue in evolutionary biology. The circadian clock is a highly conserved system existing in almost all organisms that regulates a wide range of physiological and behavioral events to adapt to the day-night cycle. Here, the interactions between hCK1ε/δ/DBT (Drosophila ortholog of CK1δ/ε) and serine-rich (SR) motifs from hPER2 (ortholog of Drosophila per) were reconstructed in a Drosophila circadian system. The results indicated that in Drosophila, the SR mutant form hPER2S662G does not recapitulate the mouse or human mutant phenotype. However, introducing hCK1δ (but not DBT) shortened the circadian period and restored the SR motif function. We found that hCK1δ is catalytically more efficient than DBT in phosphorylating the SR motif, which demonstrates that the evolution of CK1δ activity is required for SR motif modulation. Moreover, an abundance of phosphorylatable SR motifs and the striking emergence of putative SR motifs in vertebrate proteins were observed, which provides further evidence that the correlated evolution between kinase activity and its substrates set the stage for functional diversity in vertebrates. It is possible that such correlated evolution may serve as a biomarker associated with the adaptive benefits of diverse organisms. These results also provide a concrete example of how functional synthesis can be achieved through introducing evolutionary partners in vivo. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
22. Family-wide Structural Characterization and Genomic Comparisons Decode the Diversity-oriented Biosynthesis of Thalassospiramides by Marine Proteobacteria.
- Author
-
Weipeng Zhang, Liang Lu, Qiliang Lai, Beika Zhu, Zhongrui Li, Ying Xu, Zongze Shao, Herrup, Karl, Moore, Bradley S., Ross, Avena C., and Pei-Yuan Qian
- Subjects
- *
PEPTIDE synthesis , *PROTEOBACTERIA , *NEUROPROTECTIVE agents , *HORIZONTAL gene transfer , *AMINO acid metabolism - Abstract
The thalassospiramide lipopeptides have great potential for therapeutic applications; however, their structural and functional diversity and biosynthesis are poorly understood. Here, by cultivating 130 Rhodospirillaceae strains sampled from oceans worldwide, we discovered 21 new thalassospiramide analogues and demonstrated their neuroprotective effects. To investigate the diversity of biosynthetic gene cluster (BGC) architectures, we sequenced the draft genomes of 28 Rhodospirillaceae strains. Our family-wide genomic analysis revealed three types of dysfunctional BGCs and four functional BGCs whose architectures correspond to four production patterns. This correlation allowed us to reassess the "diversity-oriented biosynthesis" proposed for the microbial production of thalassospiramides, which involves iteration of several key modules. Preliminary evolutionary investigation suggested that the functional BGCs could have arisen through module/domain loss, whereas the dysfunctional BGCs arose through horizontal gene transfer. Further comparative genomics indicated that thalassospiramide production is likely to be attendant on particular genes/pathways for amino acid metabolism, signaling transduction, and compound efflux. Our findings provide a systematic understanding of thalassospiramide production and new insights into the underlying mechanism. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
23. Temperature effect on kinetic friction characteristics of Cu substrate composed by single crystal and polycrystalline structures.
- Author
-
Chien, Chi-Hui, Wang, Chung-Ting, Tsai, Cing-Han, Yang, Ping-Feng, Lu, Ying-Xu, and Chen, Bo-Syun
- Subjects
- *
TEMPERATURE effect , *SLIDING friction , *COPPER compounds , *SUBSTRATES (Materials science) , *SINGLE crystals , *POLYCRYSTALS , *ULTRASONIC bonding , *MOLECULAR dynamics - Abstract
Cu–Cu ultrasonic bonding is a highly promising technology for advanced interconnect technology for a 3D integrated circuit micro bump. The interface kinetic friction characteristic is also a key factor in determining the level of bonding for this technology. This study uses molecular dynamics simulation to determine the effects of different temperatures on the material kinetic friction characteristics of Cu substrates in single-crystal and polycrystalline structures. The Taguchi method is used to optimize the simulation, in order to confirm that the convergent kinetic friction coefficients are not affected by size effect. A comparison between the results obtained in the present study and those of previous studies shows good agreement between these two sets of results for kinetic friction coefficients. In order to thoroughly understand the effect of temperature on material characteristics, this study uses the central symmetry parameter to monitor defected atoms and to determine the kinetic friction characteristics at various temperatures. The results show that in single-crystal structures, because the generation of dislocations is not restricted to grain boundaries, the normal force does not change significantly but the tangential force decreases as the temperature increases. Therefore, the kinetic friction coefficient for single-crystal Cu decreases as temperature increases. Because the generation of dislocations in polycrystalline structures is restricted to grain boundaries between 293 K and 650 K, the tangential force and the normal force do not decrease significantly as the temperature increases. Consequently, the kinetic friction coefficient for polycrystalline Cu remains stable and is unaffected by any increase in temperature. Between 825 K and 1000 K, although the generation of dislocations in polycrystalline structures is still restricted to grain boundaries, high temperatures soften the material, which leads to a significant decrease in the tangential force and the normal force. Therefore, the kinetic friction coefficient of polycrystalline Cu does not decrease significantly. Finally, at temperatures of less than 850 K, the kinetic friction coefficient for single-crystal Cu is greater than that for polycrystalline Cu. At 850 K, the kinetic friction coefficient for single-crystal Cu is equal to that for polycrystalline Cu, but at 1000 K, the kinetic friction coefficient for single-crystal Cu is less than that for polycrystalline Cu. The results of the simulation show that lattice structures have a significant effect on the kinetic friction coefficient at different temperatures. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
24. GW25-e0097 Interleukin-6 promoter polymorphism is associated with P wave dispersion in hypertensive subjects with atrial fibrillation.
- Author
-
Min, Pan, Gang, Li, Ying, Xu, Fei, Cai, Hai-Hua, Geng, and Jian-Hua, Zhu
- Subjects
- *
INTERLEUKIN-6 , *PROMOTERS (Genetics) , *GENETIC polymorphisms , *HYPERTENSION , *ATRIAL fibrillation , *P-waves (Electrocardiography) , *CYTOKINES - Published
- 2014
- Full Text
- View/download PDF
25. Melatonin and the circadian system: contributions to successful female reproduction.
- Author
-
Reiter, Russel J., Hiroshi Tamura, Dun Xian Tan, and Xiao-Ying Xu
- Subjects
- *
PHYSIOLOGICAL effects of melatonin , *CIRCADIAN rhythms , *REPRODUCTIVE health , *OVARIAN follicle , *OXIDATIVE stress , *SUPRACHIASMATIC nucleus - Abstract
Objective To summarize the role of melatonin and circadian rhythms in determining optimal female reproductive physiology, especially at the peripheral level. Design Databases were searched for the related English-language literature published up to March 1, 2014. Only papers in peer-reviewed journals are cited. Setting Not applicable. Patient(s) Not applicable. Intervention(s) Melatonin treatment, alterations of the normal light:dark cycle and light exposure at night. Main Outcome Measure(s) Melatonin levels in the blood and in the ovarian follicular fluid and melatonin synthesis, oxidative damage and circadian rhythm disturbances in peripheral reproductive organs. Result(s) The central circadian regulatory system is located in the suprachiasmatic nucleus (SCN). The output of this master clock is synchronized to 24 hours by the prevailing light-dark cycle. The SCN regulates rhythms in peripheral cells via the autonomic nervous system and it sends a neural message to the pineal gland where it controls the cyclic production of melatonin; after its release, the melatonin rhythm strengthens peripheral oscillators. Melatonin is also produced in the peripheral reproductive organs, including granulosa cells, the cumulus oophorus, and the oocyte. These cells, along with the blood, may contribute melatonin to the follicular fluid, which has melatonin levels higher than those in the blood. Melatonin is a powerful free radical scavenger and protects the oocyte from oxidative stress, especially at the time of ovulation. The cyclic levels of melatonin in the blood pass through the placenta and aid in the organization of the fetal SCN. In the absence of this synchronizing effect, the offspring may exhibit neurobehavioral deficits. Also, melatonin protects the developing fetus from oxidative stress. Melatonin produced in the placenta likewise may preserve the optimal function of this organ. Conclusion(s) Both stable circadian rhythms and cyclic melatonin availability are critical for optimal ovarian physiology and placental function. Because light exposure after darkness onset at night disrupts the master circadian clock and suppresses elevated nocturnal melatonin levels, light at night should be avoided. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
26. Retraction notice to protein–protein interaction and SNP analysis in intraductal papillary mucinous neoplasm [GENE 513/1 (2013) 219 - 224].
- Author
-
Pu, Jiang, Weidong, Zang, Lishan, Wang, Ying, Xu, Yang, Liu, and Shi-xiong, Deng
- Subjects
- *
PUBLISHED errata , *PROTEIN-protein interactions , *SINGLE nucleotide polymorphisms , *RENAL collecting tubule , *MUCINOUS adenocarcinoma , *GENE expression - Published
- 2016
- Full Text
- View/download PDF
27. GW25-e0564 Influencing factors of the success rate of cardiopulmonary resuscitation.
- Author
-
Xiangqian, Sui, Yanhua, Zhou, Min, Deng, Ying, Xu, Wei, Ma, Shibing, Zhu, Xiaojie, Zhang, and Jinyu, Huang
- Subjects
- *
CARDIOPULMONARY resuscitation , *HEART diseases , *HOSPITAL admission & discharge , *MEDICAL statistics , *ADRENALINE , *DRUG dosage , *THERAPEUTICS - Published
- 2014
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.