20 results on '"Chisholm, Andrew"'
Search Results
2. Connectomes across development reveal principles of brain maturation
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Witvliet, Daniel, Mulcahy, Ben, Mitchell, James K., Meirovitch, Yaron, Berger, Daniel R., Wu, Yuelong, Liu, Yufang, Koh, Wan Xian, Parvathala, Rajeev, Holmyard, Douglas, Schalek, Richard L., Shavit, Nir, Chisholm, Andrew D., Lichtman, Jeff W., Samuel, Aravinthan D. T., and Zhen, Mei
- Abstract
An animal’s nervous system changes as its body grows from birth to adulthood and its behaviours mature1–8. The form and extent of circuit remodelling across the connectome is unknown3,9–15. Here we used serial-section electron microscopy to reconstruct the full brain of eight isogenic Caenorhabditis elegansindividuals across postnatal stages to investigate how it changes with age. The overall geometry of the brain is preserved from birth to adulthood, but substantial changes in chemical synaptic connectivity emerge on this consistent scaffold. Comparing connectomes between individuals reveals substantial differences in connectivity that make each brain partly unique. Comparing connectomes across maturation reveals consistent wiring changes between different neurons. These changes alter the strength of existing connections and create new connections. Collective changes in the network alter information processing. During development, the central decision-making circuitry is maintained, whereas sensory and motor pathways substantially remodel. With age, the brain becomes progressively more feedforward and discernibly modular. Thus developmental connectomics reveals principles that underlie brain maturation.
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- 2021
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3. A goods and services tax for Australia.
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Chisholm, Andrew, Freebairn, John, and Porter, Michael
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Consumption taxes -- Analysis ,Value-added tax -- Analysis ,Australia -- Tax policy - Published
- 1990
4. The microtubule regulator EFA-6 forms cortical foci dependent on its intrinsically disordered region and interactions with tubulins
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Sandhu, Anjali, Lyu, Xiaohui, Wan, Xinghaoyun, Meng, Xuefeng, Tang, Ngang Heok, Gonzalez, Gilberto, Syed, Ishana N., Chen, Lizhen, Jin, Yishi, and Chisholm, Andrew D.
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The EFA6 protein family, originally identified as Sec7 guanine nucleotide exchange factors, has also been found to regulate cortical microtubule (MT) dynamics. Here, we find that in the mature C. elegansepidermal epithelium, EFA-6 forms punctate foci in specific regions of the apical cortex, dependent on its intrinsically disordered region (IDR). The EFA-6 IDR can form biomolecular condensates in vitro. In genetic screens for mutants with altered GFP::EFA-6 localization, we identified a gain-of-function (gf) mutation in α-tubulin tba-1that induces ectopic EFA-6 foci in multiple cell types. Lethality of tba-1(gf) is partially suppressed by loss of function in efa-6. The ability of TBA-1(gf) to trigger ectopic EFA-6 foci requires β-tubulin TBB-2 and the chaperon EVL-20/Arl2. tba-1(gf)-induced EFA-6 foci display slower turnover, contain the MT-associated protein TAC-1/TACC, and require the EFA-6 MT elimination domain (MTED). Our results reveal functionally important crosstalk between cellular tubulins and cortical MT regulators in vivo.
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- 2024
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5. Letters
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Durrell, Bryant, Theriault, Richard, Whistler, Donovan, Snyder, Robert, McCutchen, J.E., Baker, Kim, Cowan, K.C., Molitor, Nancy K., Wicks, Tod, and Chisholm, Andrew M.
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LETTERS PostScript Printers Revisited In 'Fit to Print' (September '89), you claim that the Qume CrystalPrint Publisher doesn't work with Apple's LaserWriter driver 6.0. This is simply inaccurate. This very […]
- Published
- 1990
6. Genetic Suppression of Basement Membrane Defects in Caenorhabditis elegansby Gain of Function in Extracellular Matrix and Cell-Matrix Attachment Genes
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Gotenstein, Jennifer R, Koo, Cassidy C, Ho, Tiffany W, and Chisholm, Andrew D
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Basement membranes are extracellular matrices essential for embryonic development in animals. Peroxidasins are extracellular peroxidases implicated in the unique sulfilimine cross-links between type IV basement membrane collagens. Loss of function in the Caenorhabditis elegansperoxidasin PXN-2results in fully penetrant embryonic or larval lethality. Using genetic suppressor screening, we find that the requirement for PXN-2in development can be bypassed by gain of function in multiple genes encoding other basement membrane components, or proteins implicated in cell-matrix attachment. We identify multiple alleles of let-805, encoding the transmembrane protein myotactin, which suppress phenotypes of pxn-2null mutants and of other basement membrane mutants such as F-spondin/spon-1. These let-805suppressor alleles cause missense alterations in two pairs of FNIII repeats in the extracellular domain; they act dominantly and have no detectable phenotypes alone, suggesting they cause gain of function. We also identify suppressor missense mutations affecting basement membrane components type IV collagen (emb-9, let-2) and perlecan (unc-52), as well as a mutation affecting spectraplakin (vab-10), a component of the epidermal cytoskeleton. These suppressor alleles do not bypass the developmental requirement for core structural proteins of the basement membrane such as laminin or type IV collagen. In conclusion, putative gain-of-function alterations in matrix proteins or in cell-matrix receptors can overcome the requirement for certain basement membrane proteins in embryonic development, revealing previously unknown plasticity in the genetic requirements for the extracellular matrix.
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- 2018
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7. Targeted Mutagenesis of Duplicated Genes in Caenorhabditis elegansUsing CRISPR-Cas9
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Xu, Suhong, Wang, Zhiping, Kim, Kyung Won, Jin, Yishi, and Chisholm, Andrew D.
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- 2016
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8. Diary of ... a building surveyor: Andrew Chisholm, managing director of CNP, takes us through his week
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Chisholm, Andrew
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Surveyors -- Personal narratives ,Business ,Business, international ,Real estate industry - Abstract
Monday I DON'T LIKE MONDAYS--I LOVE THEM, ESPECIALLY Mondays like this one. I spent the back-end of last week in Puerto Banus, Spain, with the other 14 directors of CNP [...]
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- 2006
9. Epidermal Wound Healing in the Nematode Caenorhabditis elegans
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Chisholm, Andrew D.
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Significance:Healing of epidermal wounds is a fundamentally conserved process found in essentially all multicellular organisms. Studies of anatomically simple and genetically tractable model invertebrates can illuminate the roles of key genes and mechanisms in wound healing.Recent Advances:The nematode skin is composed of a simple epithelium, the epidermis (also known as hypodermis), and an associated extracellular cuticle. Nematodes likely have a robust capacity for epidermal repair; yet until recently, relatively few studies have directly analyzed wound healing. Here we review epidermal wound responses and repair in the model nematode Caenorhabditis elegans.Critical Issues:Wounding the epidermis triggers a cutaneous innate immune response and wound closure. The innate immune response involves upregulation of a suite of antimicrobial peptides. Wound closure involves a Ca2+-triggered rearrangement of the actin cytoskeleton. These processes appear to be initiated independently, yet, their coordinated activity allows the animal to survive otherwise fatal skin wounds.Future Directions:Unanswered questions include the nature of the damage-associated molecular patterns sensed by the epidermis, the signaling pathways relaying Ca2+to the cytoskeleton, and the mechanisms of permeability barrier repair.
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- 2015
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10. The Microtubule Minus-End-Binding Protein Patronin/PTRN-1 Is Required for Axon Regeneration in C. elegans
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Chuang, Marian, Goncharov, Alexandr, Wang, Shaohe, Oegema, Karen, Jin, Yishi, and Chisholm, Andrew D.
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Precise regulation of microtubule (MT) dynamics is increasingly recognized as a critical determinant of axon regeneration. In contrast to developing neurons, mature axons exhibit noncentrosomal microtubule nucleation. The factors regulating noncentrosomal MT architecture in axon regeneration remain poorly understood. We report that PTRN-1, the C. elegansmember of the Patronin/Nezha/calmodulin- and spectrin-associated protein (CAMSAP) family of microtubule minus-end-binding proteins, is critical for efficient axon regeneration in vivo. ptrn-1-null mutants display generally normal developmental axon outgrowth but significantly impaired regenerative regrowth after laser axotomy. Unexpectedly, mature axons in ptrn-1mutants display elevated numbers of dynamic axonal MTs before and after injury, suggesting that PTRN-1 inhibits MT dynamics. The CKK domain of PTRN-1 is necessary and sufficient for its functions in axon regeneration and MT dynamics and appears to stabilize MTs independent of minus-end localization. Whereas in developing neurons, PTRN-1 inhibits activity of the DLK-1 mitogen-activated protein kinase (MAPK) cascade, we find that, in regeneration, PTRN-1 and DLK-1 function together to promote axonal regrowth.
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- 2014
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11. The Caenorhabditis elegansepidermis as a model skin. I: development, patterning, and growth
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Chisholm, Andrew D. and Hsiao, Tiffany I.
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The skin of the nematode Caenorhabditis elegansis composed of a simple epidermal epithelium and overlying cuticle. The skin encloses the animal and plays central roles in body morphology and physiology; its simplicity and accessibility make it a tractable genetic model for several aspects of skin biology. Epidermal precursors are specified by a hierarchy of transcriptional regulators. Epidermal cells form on the dorsal surface of the embryo and differentiate to form the epidermal primordium, which then spreads out in a process of epiboly to enclose internal tissues. Subsequent elongation of the embryo into a vermiform larva is driven by cell shape changes and cell fusions in the epidermis. Most epidermal cells fuse in mid‐embryogenesis to form a small number of multinucleate syncytia. During mid‐embryogenesis the epidermis also becomes intimately associated with underlying muscles, performing a tendon‐like role in transmitting muscle force. Post‐embryonic development of the epidermis involves growth by addition of new cells to the syncytia from stem cell‐like epidermal seam cells and by an increase in cell size driven by endoreplication of the chromosomes in epidermal nuclei. WIREs Dev Biol2012 doi: 10.1002/wdev.79 This article is categorized under: Early Embryonic Development > Development to the Basic Body PlanInvertebrate Organogenesis > Worms
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- 2012
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12. The Caenorhabditis elegansepidermis as a model skin. II: differentiation and physiological roles
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Chisholm, Andrew D. and Xu, Suhong
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The Caenorhabditis elegansepidermis forms one of the principal barrier epithelia of the animal. Differentiation of the epidermis begins in mid embryogenesis and involves apical–basal polarization of the cytoskeletal and secretory systems as well as cellular junction formation. Secretion of the external cuticle layers is one of the major developmental and physiological specializations of the epidermal epithelium. The four post‐embryonic larval stages are separated by periodic moults, in which the epidermis generates a new cuticle with stage‐specific characteristics. The differentiated epidermis also plays key roles in endocrine signaling, fat storage, and ionic homeostasis. The epidermis is intimately associated with the development and function of the nervous system, and may have glial‐like roles in modulating neuronal function. The epidermis provides passive and active defenses against skin‐penetrating pathogens and can repair small wounds. Finally, age‐dependent deterioration of the epidermis is a prominent feature of aging and may affect organismal aging and life span. WIREs Dev Biol2012 doi: 10.1002/wdev.77 This article is categorized under: Early Embryonic Development > Development to the Basic Body PlanInvertebrate Organogenesis > Worms
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- 2012
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13. The Phosphoinositide Kinase PIKfyve/Fab1p Regulates Terminal Lysosome Maturation in Caenorhabditis elegans
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Nicot, Anne-Sophie, Fares, Hanna, Payrastre, Bernard, Chisholm, Andrew D., Labouesse, Michel, and Laporte, Jocelyn
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Membrane dynamics is necessary for cell homeostasis and signal transduction and is in part regulated by phosphoinositides. Pikfyve/Fab1p is a phosphoinositide kinase that phosphorylates phosphatidylinositol 3-monophosphate into phosphatidylinositol-3,5-bisphosphate [PtdIns(3,5)P2] and is implicated in membrane homeostasis in yeast and in mammalian cells. These two phosphoinositides are substrates of myotubularin phosphatases found mutated in neuromuscular diseases. We studied the roles of phosphatidylinositol phosphate kinase 3 (PPK-3), the orthologue of PIKfyve/Fab1p, in a multicellular organism, Caenorhabditis elegans. Complete loss of ppk-3function induces developmental defects characterized by embryonic lethality, whereas partial loss of function leads to growth retardation. At the cellular level, ppk-3mutants display a striking enlargement of vacuoles positive for lysosome-associated membrane protein 1 in different tissues. In the intestine, RAB-7–positive late endosomes are also enlarged. Membranes of the enlarged lysosomes originate at least in part from smaller lysosomes, and functional and genetic analyses show that the terminal maturation of lysosomes is defective. Protein degradation is not affected in the hypomorphic ppk-3mutant and is thus uncoupled from membrane retrieval. We measured the level of PtdIns(3,5)P2and showed that its production is impaired in this mutant. This work strongly suggests that the main function of PPK-3 is to mediate membrane retrieval from matured lysosomes through regulation of PtdIns(3,5)P2.
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- 2006
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14. The divergent C. elegans ephrin EFN-4 functions inembryonic morphogenesis in a pathway independent of the VAB-1 Eph receptor.
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D, Chin-Sang Ian, L, Moseley Sarah, Mei, Ding, J, Harrington Robert, E, George Sean, and D, Chisholm Andrew
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The C. elegans genome encodes a single Eph receptor tyrosine kinase, VAB-1, which functions in neurons to control epidermal morphogenesis. Four members of the ephrin family of ligands for Eph receptors have been identified in C. elegans. Three ephrins (EFN-1/VAB-2, EFN-2 and EFN-3) have been previously shown to function in VAB-1 signaling. We show that mutations in the gene mab-26 affect the fourth C. elegans ephrin, EFN-4. We show that efn-4 also functions in embryonic morphogenesis, and that it is expressed in the developing nervous system. Interestingly, efn-4 mutations display synergistic interactions with mutations in the VAB-1 receptor and in the EFN-1 ephrin, indicating that EFN-4 may function independently of the VAB-1 Eph receptor in morphogenesis. Mutations in the LAR-like receptor tyrosine phosphatase PTP-3 and in the Semaphorin-2A homolog MAB-20 disrupt embryonic neural morphogenesis. efn-4 mutations synergize with ptp-3 mutations, but not with mab-20 mutations, suggesting that EFN-4 and Semaphorin signaling could function in a common pathway or in opposing pathways in C. elegans embryogenesis.
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- 2002
15. The divergent C. elegans ephrin EFN-4 functions inembryonic morphogenesis in a pathway independent of the VAB-1 Eph receptor
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Chin-Sang, Ian D., Moseley, Sarah L., Ding, Mei, Harrington, Robert J., George, Sean E., and Chisholm, Andrew D.
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The C. elegans genome encodes a single Eph receptor tyrosine kinase, VAB-1, which functions in neurons to control epidermal morphogenesis. Four members of the ephrin family of ligands for Eph receptors have been identified in C. elegans. Three ephrins (EFN-1/VAB-2, EFN-2 and EFN-3) have been previously shown to function in VAB-1 signaling. We show that mutations in the gene mab-26 affect the fourth C. elegansephrin, EFN-4. We show that efn-4 also functions in embryonic morphogenesis, and that it is expressed in the developing nervous system. Interestingly, efn-4 mutations display synergistic interactions with mutations in the VAB-1 receptor and in the EFN-1 ephrin, indicating that EFN-4 may function independently of the VAB-1 Eph receptor in morphogenesis. Mutations in the LAR-like receptor tyrosine phosphatase PTP-3 and in the Semaphorin-2A homolog MAB-20 disrupt embryonic neural morphogenesis.efn-4 mutations synergize with ptp-3 mutations, but not withmab-20 mutations, suggesting that EFN-4 and Semaphorin signaling could function in a common pathway or in opposing pathways in C. elegans embryogenesis.
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- 2002
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16. The C. elegans LAR-like receptor tyrosine phosphatase PTP-3 and the VAB-1 Eph receptor tyrosine kinase have partly redundant functions in morphogenesis.
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J, Harrington Robert, J, Gutch Michael, O, Hengartner Michael, K, Tonks Nicholas, and D, Chisholm Andrew
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Receptor-like protein-tyrosine phosphatases (RPTPs) form a diverse family of cell surface molecules whose functions remain poorly understood. The LAR subfamily of RPTPs has been implicated in axon guidance and neural development. Here we report the molecular and genetic analysis of the C. elegans LAR subfamily member PTP-3. PTP-3 isoforms are expressed in many tissues in early embryogenesis, and later become localized to neuronal processes and to epithelial adherens junctions. Loss of function in ptp-3 causes low-penetrance defects in gastrulation and epidermal development similar to those of VAB-1 Eph receptor tyrosine kinase mutants. Loss of function in ptp-3 synergistically enhances phenotypes of mutations in the C. elegans Eph receptor VAB-1 and a subset of its ephrin ligands, but does not show specific interactions with several other RTKs or morphogenetic mutants. The genetic interaction of vab-1 and ptp-3 suggests that LAR-like RPTPs and Eph receptors have related and partly redundant functions in C. elegans morphogenesis.
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- 2002
17. The C. elegans LAR-like receptor tyrosine phosphatase PTP-3 and the VAB-1 Eph receptor tyrosine kinase have partly redundant functions in morphogenesis
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Harrington, Robert J., Gutch, Michael J., Hengartner, Michael O., Tonks, Nicholas K., and Chisholm, Andrew D.
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Receptor-like protein-tyrosine phosphatases (RPTPs) form a diverse family of cell surface molecules whose functions remain poorly understood. The LAR subfamily of RPTPs has been implicated in axon guidance and neural development. Here we report the molecular and genetic analysis of the C. elegans LAR subfamily member PTP-3. PTP-3 isoforms are expressed in many tissues in early embryogenesis, and later become localized to neuronal processes and to epithelial adherens junctions. Loss of function in ptp-3 causes low-penetrance defects in gastrulation and epidermal development similar to those of VAB-1 Eph receptor tyrosine kinase mutants. Loss of function in ptp-3 synergistically enhances phenotypes of mutations in the C. elegans Eph receptor VAB-1 and a subset of its ephrin ligands, but does not show specific interactions with several other RTKs or morphogenetic mutants. The genetic interaction of vab-1 and ptp-3 suggests that LAR-like RPTPs and Eph receptors have related and partly redundant functions in C. elegans morphogenesis.
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- 2002
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18. Redox-sensitive CDC-42 clustering promotes wound closure in C. elegans
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Xu, Jingxiu, Meng, Xinan, Yang, Qingxian, Zhang, Jianqin, Hu, Wei, Fu, Hongying, Chen, Jack Wei, Ma, Weirui, Chisholm, Andrew D., Sun, Qiming, and Xu, Suhong
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Tissue damage induces immediate-early signals, activating Rho small GTPases to trigger actin polymerization essential for later wound repair. However, how tissue damage is sensed to activate Rho small GTPases locally remains elusive. Here, we found that wounding the C. elegansepidermis induces rapid relocalization of CDC-42 into plasma membrane-associated clusters, which subsequently recruits WASP/WSP-1 to trigger actin polymerization to close the wound. In addition, wounding induces a local transient increase and subsequent reduction of H2O2, which negatively regulates the clustering of CDC-42 and wound closure. CDC-42 CAAX motif-mediated prenylation and polybasic region-mediated cation-phospholipid interaction are both required for its clustering. Cysteine residues participate in intermolecular disulfide bonds to reduce membrane association and are required for negative regulation of CDC-42 clustering by H2O2. Collectively, our findings suggest that H2O2-regulated fine-tuning of CDC-42 localization can create a distinct biomolecular cluster that facilitates rapid epithelial wound repair after injury.
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- 2021
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19. Caenorhabditis elegansjunctophilin has tissue-specific functions and regulates neurotransmission with extended-synaptotagmin
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Piggott, Christopher A, Wu, Zilu, Nurrish, Stephen, Xu, Suhong, Kaplan, Joshua M, Chisholm, Andrew D, and Jin, Yishi
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The junctophilin family of proteins tether together plasma membrane (PM) and endoplasmic reticulum (ER) membranes, and couple PM- and ER-localized calcium channels. Understanding in vivofunctions of junctophilins is of great interest for dissecting the physiological roles of ER-PM contact sites. Here, we show that the sole Caenorhabditis elegansjunctophilin JPH-1 localizes to discrete membrane contact sites in neurons and muscles and has important tissue-specific functions. jph-1null mutants display slow growth and development due to weaker contraction of pharyngeal muscles, leading to reduced feeding. In the body wall muscle, JPH-1 colocalizes with the PM-localized EGL-19 voltage-gated calcium channel and ER-localized UNC-68 RyR calcium channel, and is required for animal movement. In neurons, JPH-1 colocalizes with the membrane contact site protein Extended-SYnaptoTagmin 2 (ESYT-2) in the soma, and is present near presynaptic release sites. Interestingly, jph-1and esyt-2null mutants display mutual suppression in their response to aldicarb, suggesting that JPH-1 and ESYT-2 have antagonistic roles in neuromuscular synaptic transmission. Additionally, we find an unexpected cell nonautonomous effect of jph-1in axon regrowth after injury. Genetic double mutant analysis suggests that jph-1functions in overlapping pathways with two PM-localized voltage-gated calcium channels, egl-19and unc-2, and with unc-68for animal health and development. Finally, we show that jph-1regulates the colocalization of EGL-19 and UNC-68 and that unc-68is required for JPH-1 localization to ER-PM puncta. Our data demonstrate important roles for junctophilin in cellular physiology, and also provide insights into how junctophilin functions together with other calcium channels in vivo.
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- 2021
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20. Conservation and divergence of axon guidance mechanisms
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Chisholm, Andrew and Tessier-Lavigne, Marc
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Analysis of axon guidance mechanisms in vertebrates, Caenorhabditis elegans, and Drosophila melanogaster has led to the identification of several signaling pathways, many of which are strikingly conserved in function. Recent studies indicate that several axon guidance mechanisms are highly conserved in all animals, whereas others, though still conserved in a general sense, show strong evolutionary divergence at a detailed mechanistic level.
- Published
- 1999
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