1. Understanding metabolic plasticity at single cell resolution
- Author
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Abbate, Christina C, Hu, Jason, and Albeck, John G
- Subjects
Biochemistry and Cell Biology ,Biological Sciences ,Bioengineering ,Genetics ,1.1 Normal biological development and functioning ,2.1 Biological and endogenous factors ,Generic health relevance ,Single-Cell Analysis ,Humans ,Animals ,Metabolomics ,Circadian Rhythm ,Cell Cycle ,Carbon ,adenosine triphosphate ,fluorescence resonance energy transfer ,glycolysis ,metabolic regulation ,oxidative phosphorylation ,systems biology ,Biochemistry & Molecular Biology ,Biochemistry and cell biology - Abstract
It is increasingly clear that cellular metabolic function varies not just between cells of different tissues, but also within tissues and cell types. In this essay, we envision how differences in central carbon metabolism arise from multiple sources, including the cell cycle, circadian rhythms, intrinsic metabolic cycles, and others. We also discuss and compare methods that enable such variation to be detected, including single-cell metabolomics and RNA-sequencing. We pay particular attention to biosensors for AMPK and central carbon metabolites, which when used in combination with metabolic perturbations, provide clear evidence of cellular variance in metabolic function.
- Published
- 2024