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Over the last 5 years, multiple stakeholders in the field of spinal cord injury (SCI) research have initiated efforts to promote publications standards and enable sharing of experimental data. In 2016, the National Institutes of Health/National Institute of Neurological Disorders and Stroke hosted representatives from the SCI community to streamline these efforts and discuss the future of data sharing in the field according to the FAIR (Findable, Accessible, Interoperable and Reusable) data stewardship principles. As a next step, a multi-stakeholder group hosted a 2017 symposium in Washington, DC entitled "FAIR SCI Ahead: the Evolution of the Open Data Commons for Spinal Cord Injury research." The goal of this meeting was to receive feedback from the community regarding infrastructure, policies, and organization of a community-governed Open Data Commons (ODC) for pre-clinical SCI research. Here, we summarize the policy outcomes of this meeting and report on progress implementing these policies in the form of a digital ecosystem: the Open Data Commons for Spinal Cord Injury (ODC-SCI.org). ODC-SCI enables data management, harmonization, and controlled sharing of data in a manner consistent with the well-established norms of scholarly publication. Specifically, ODC-SCI is organized around virtual "laboratories" with the ability to share data within each of three distinct data-sharing spaces: within the laboratory, across verified laboratories, or publicly under a creative commons license (CC-BY 4.0) with a digital object identifier that enables data citation. The ODC-SCI implements FAIR data sharing and enables pooled data-driven discovery while crediting the generators of valuable SCI data.

Abstract Background Targeted delivery of pharmaceutical agents into selected populations of CNS (Central Nervous System) neurons is an extremely compelling goal. Currently, systemic methods are generally used for delivery of pain medications, anti-virals for treatment of dermatomal infections, anti-spasmodics, and neuroprotectants. Systemic side effects or undesirable effects on parts of the CNS that are not involved in the pathology limit efficacy and limit clinical utility for many classes of pharmaceuticals. Axonal transport from the periphery offers a possible selective route, but there has been little progress towards design of agents that can accomplish targeted delivery via this intraneural route. To achieve this goal, we developed a tripartite molecular construction concept involving an axonal transport facilitator molecule, a polymer linker, and a large number of drug molecules conjugated to the linker, then sought to evaluate its neurobiology and pharmacological behavior. Results We developed chemical synthesis methodologies for assembling these tripartite complexes using a variety of axonal transport facilitators including nerve growth factor, wheat germ agglutinin, and synthetic facilitators derived from phage display work. Loading of up to 100 drug molecules per complex was achieved. Conjugation methods were used that allowed the drugs to be released in active form inside the cell body after transport. Intramuscular and intradermal injection proved effective for introducing pharmacologically effective doses into selected populations of CNS neurons. Pharmacological efficacy with gabapentin in a paw withdrawal latency model revealed a ten fold increase in half life and a 300 fold decrease in necessary dose relative to systemic administration for gabapentin when the drug was delivered by axonal transport using the tripartite vehicle. Conclusion Specific targeting of selected subpopulations of CNS neurons for drug delivery by axonal transport holds great promise. The data shown here provide a basic framework for the intraneural pharmacology of this tripartite complex. The pharmacologically efficacious drug delivery demonstrated here verify the fundamental feasibility of using axonal transport for targeted drug delivery.

The past decade has seen accelerating movement from data protectionism in publishing toward open data sharing to improve reproducibility and translation of biomedical research. Developing data sharing infrastructures to meet these new demands remains a challenge. One model for data sharing involves simply attaching data, irrespective of its type, to publisher websites or general use repositories. However, some argue this creates a 'data dump' that does not promote the goals of making data Findable, Accessible, Interoperable and Reusable (FAIR). Specialized data sharing communities offer an alternative model where data are curated by domain experts to make it both open and FAIR. We report on our experiences developing one such data-sharing ecosystem focusing on 'long-tail' preclinical data, the Open Data Commons for Spinal Cord Injury (odc-sci.org). ODC-SCI was developed with community-based agile design requirements directly pulled from a series of workshops with multiple stakeholders (researchers, consumers, non-profit funders, governmental agencies, journals, and industry members). ODC-SCI focuses on heterogeneous tabular data collected by preclinical researchers including bio-behaviour, histopathology findings and molecular endpoints. This has led to an example of a specialized neurocommons that is well-embraced by the community it aims to serve. In the present paper, we provide a review of the community-based design template and describe the adoption by the community including a high-level review of current data assets, publicly released datasets, and web analytics. Although odc-sci.org is in its late beta stage of development, it represents a successful example of a specialized data commons that may serve as a model for other fields. [ABSTRACT FROM AUTHOR]

Abstract Background Targeted delivery of pharmaceutical agents into selected populations of CNS (Central Nervous System) neurons is an extremely compelling goal. Currently, systemic methods are generally used for delivery of pain medications, anti-virals for treatment of dermatomal infections, anti-spasmodics, and neuroprotectants. Systemic side effects or undesirable effects on parts of the CNS that are not involved in the pathology limit efficacy and limit clinical utility for many classes of pharmaceuticals. Axonal transport from the periphery offers a possible selective route, but there has been little progress towards design of agents that can accomplish targeted delivery via this intraneural route. To achieve this goal, we developed a tripartite molecular construction concept involving an axonal transport facilitator molecule, a polymer linker, and a large number of drug molecules conjugated to the linker, then sought to evaluate its neurobiology and pharmacological behavior. Results We developed chemical synthesis methodologies for assembling these tripartite complexes using a variety of axonal transport facilitators including nerve growth factor, wheat germ agglutinin, and synthetic facilitators derived from phage display work. Loading of up to 100 drug molecules per complex was achieved. Conjugation methods were used that allowed the drugs to be released in active form inside the cell body after transport. Intramuscular and intradermal injection proved effective for introducing pharmacologically effective doses into selected populations of CNS neurons. Pharmacological efficacy with gabapentin in a paw withdrawal latency model revealed a ten fold increase in half life and a 300 fold decrease in necessary dose relative to systemic administration for gabapentin when the drug was delivered by axonal transport using the tripartite vehicle. Conclusion Specific targeting of selected subpopulations of CNS neurons for drug delivery by axonal transport holds great promise. The data shown here provide a basic framework for the intraneural pharmacology of this tripartite complex. The pharmacologically efficacious drug delivery demonstrated here verify the fundamental feasibility of using axonal transport for targeted drug delivery.

We introduce a control logic which allows a group of autonomous ‘pursuers’ to herd a single, non-hostile ‘evader’ along a desired trajectory. They achieve this with a general knowledge of the repulsion scheme on the evader and utilizing a feedback control, based on the evader state and the known desired trajectory of the evader. The quasi-decentralized control of the pursuers is a version of a region holding sliding mode controller (SMC). The novelty of this work lies in the decentralized distribution of pursuers within a desired region whose boundaries are maintained utilizing the robust properties of SMC. The dynamic pursuer distribution repels the evader with a desired force which reduces its tracking error. Illustrative examples are studied for validation. [ABSTRACT FROM PUBLISHER]

We consider hostile conflicts between two multi-agent swarms, called pursuers and evaders. A Newtonian dynamics-based double integrator model is taken into account, as well as a control strategy using the relative positions and velocities of opposing swarm members. This control is introduced to achieve stability and the capture of the evaders by the pursuers. The present document considers only swarms with equal membership strengths and equal mass for simplicity. This effort begins with a set of suggested interaction force profiles, which are functions of local vectors. To formulate a robust control law, a Lyapunov-based stability analysis is used. The group pursuit is conceived in two phases: the approach phase, during which the two swarms act like two individual agents, and the assigned pursuit phase, where each pursuer has an assigned evader. We show that the uncontrolled dynamics, which are marginally stable, are stabilized by the new controller. [ABSTRACT FROM PUBLISHER]

The article presents a study that examines the base type of the crude oil samples at Stoney Creek, Ontario. The study performs cross-polarized microscopy (CPM) to compare oil samples from Creek with two naphthenic crude oils at North Sea and paraffinic oils. Result shows that Stoney Creek and naphtenic oils have similarities on its small rounded structures and smaller size of microcrystalline. Moreover, it concludes that crude oils at Stoney Creek are naphthenic.

Studies the mechanism by which leaf and fruit growth are regulated in plants growing on drying soil. Exploitation of plants' chemical signalling system and hydraulic architecture to increase the efficiency of water use in agriculture; Measurements on young plants with no fruit load; Analysis of yield and fruit quality.

We highlight the novel observation that the responses of maize leaf growth to abscisic acid (ABA) signals can be amplified both by mild water deficits and by nutrient stress. Under our experimental conditions these stresses alone had no effect on leaf growth rate. In most cases leaf growth responses were not attributable to changes in the turgors of growing cells, focusing attention on a regulatory role for cell wall biochemistry. Roles for xyloglucan endotransglycosylase (XET), expansins and peroxidases are discussed. An effect of drought on the activity of expansins seems particularly attractive if xylem sap pH is considered as a chemical signal. We show how changes in xylem sap pH can also modify local accumulation of ABA and thereby modify the apparent sensitivity of guard cells to ABA signals. [ABSTRACT FROM AUTHOR]

Demonstrates high-resolution analysis of tomato leaf elongation and application of novel time-series analysis techniques. Rejection of the practice curve fitting by data based mechanistic modelling methodology; Advantage of the technique in optimal recursive estimation of non-stationary and non-linear time series; Encouragement in using the techniques in analytical plant physiology.

Corrects an error in an article about leaf and fruit growth regulation in plants growing in dry soil appearing on the periodical 'Journal of Experimental Botany.'

Partial rootzone drying (PRD) is an irrigation technique where water is distributed unevenly to the root system such that part is irrigated while the remainder is allowed to dry the soil. Tomato (Lycopersicon esculentum Mill.) plants were grown with their roots in two soil columns to compare the physiological consequences of alternation of wet and dry columns during PRD irrigation (alternate PRD, PRD-A) with retention of the same wet and dry columns (fixed PRD, PRD-F). When PRD plants received 50% less water than well-watered (WW) plants, xylem ABA concentration ([X-ABA]) increased and stomatal conductance decreased relative to WW plants. Although both sets of PRD plants received the same amount of water, [X-ABA] of PRD-A plants increased up to 2-fold above that of PRD-F plants, which further decreased stomatal conductance. Differences in [X-ABA] were detected within an hour of alternation, but did not persist beyond the photoperiod of alternation. [X-ABA] increased linearly as whole-pot soil water content (θ pot ) and leaf water potential (Ψ leaf ) declined, but the difference in [X-ABA] between the two sets of PRD plants was not due to differences in either θ pot or Ψ leaf . In PRD-F plants, the unwatered part of the root system contributes proportionally less to the transpiration stream as the soil progressively dries (Yao et al. 2001, Plant, Cell & Environment 24, 227-235). In PRD-A plants, we hypothesise that re-watering the dry part of the root system allows these roots to contribute proportionally more to total sap flux, thus liberating a pulse of ABA to the transpiration stream as the root ABA pool accumulated during soil drying is depleted. Since the enhancement of [X-ABA] caused by PRD-A increased as θ pot and Ψ leaf declined, an optimal frequency of alternation to maximise the cumulative physiological effects of this ABA pulse must consider possible negative impacts of leaf water deficit as soil water status declines.

Tomato (Lycopersicon esculentum Mill.) plants were grown in either a glasshouse (GH) or a controlled environment cabinet (CEC) to assess the effects of partial rootzone drying (PRD) on biomass allocation. Control and PRD plants received the same amounts of water. In control plants, water was equally distributed between two compartments of a split-root system. In PRD plants, only one compartment was watered while the other was allowed to dry. At the end of each drying cycle, wet and dry compartments were alternated. In the GH, total biomass did not differ between PRD and control plants after four cycles of PRD, but PRD increased root biomass by 55% as resources were partitioned away from shoot organs. In the CEC, leaf water potential did not differ between treatments at the end of either of two cycles of PRD, but stomatal conductance of PRD plants was 20% less at the end of the first cycle than at the beginning. After two cycles of PRD in the CEC, biomass did not differ between PRD and control plants, but PRD increased root biomass by 19% over the control plants. The promotion of root biomass in PRD plants was associated with the alternation of wet and dry compartments, with increased root biomass occurring in the re-watered compartment after previous exposure to soil drying. Promotion of root biomass in field-grown PRD plants may allow the root system to access resources (water and nutrients) that would otherwise be unavailable to control plants. This may contribute to the ability of PRD plants to maintain similar leaf water potentials to conventionally irrigated plants, even when smaller irrigation volumes are supplied.