282 results on '"Nikolaos S. Thomaidis"'
Search Results
2. Artificial Sweeteners
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Konstatinos Vasilatos, Maria‐Christina Nika, Georgios Gkotsis, and Nikolaos S. Thomaidis
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- 2022
3. Complete chemical characterization of Crocus sativus via LC-HRMS: Does trimming affect the chemical content of saffron?
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Anthi Panara, Evagelos Gikas, and Nikolaos S. Thomaidis
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General Medicine ,Food Science ,Analytical Chemistry - Published
- 2023
4. Current progress in the environmental analysis of poly- and perfluoroalkyl substances (PFAS)
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Andreas Androulakakis, Nikiforos Alygizakis, Erasmia Bizani, and Nikolaos S. Thomaidis
- Abstract
Per- and polyfluoroalkyl substances (PFASs) are a class of persistent organic pollutants (POPs).
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- 2022
5. Contributors
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D.U. Ahn, Lopa Basu, Luis Calvo, Marie-Christine Champomier-Vergès, Marilena E. Dasenaki, Per Ertbjerg, Cameron Faustman, X. Feng, Mónica Flores, Luca Fontanesi, Kerri B. Gehring, David E. Gerrard, Benjamin W.B. Holman, David L. Hopkins, Dacheng Kang, Joe P. Kerry, Anastasia S. Kritikou, Alexandra Lianou, Clemente López-Bote, Sulaiman K. Matarneh, Mark McGee, A. Mendonca, Rhonda K. Miller, Aidan P. Moloney, George-John E. Nychas, Herbert W. Ockerman, Efstathios Z. Panagou, Eric N. Ponnampalam, Peter P. Purslow, Ranjith Ramanathan, Jeffrey W. Savell, Tracy L. Scheffler, Surendranath P. Suman, Nikolaos S. Thomaidis, Fidel Toldrá, Andrey A. Tyuftin, Robyn Dorothy Warner, Jeffrey D. Wood, Youling L. Xiong, Monique Zagorec, and Wangang Zhang
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- 2023
6. Meat safety: II Residues and contaminants
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Marilena E. Dasenaki, Anastasia S. Kritikou, and Nikolaos S. Thomaidis
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- 2023
7. Characterization of Scrubber Water Discharges from Ships Using Comprehensive Suspect Screening Strategies Based on GC-APCI-HRMS
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Elisa García-Gómez, Georgios Gkotsis, Maria-Christina Nika, Ida-Maja Hassellöv, Kent Salo, Anna Lunde Hermansson, Erik Ytreberg, Nikolaos S. Thomaidis, Meritxell Gros, and Mira Petrovic
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- 2023
8. Development of Liquid Chromatographic Retention Index Based on Cocamide Diethanolamine Homologous Series (C(
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Reza Aalizadeh, Varvara Nikolopoulou, and Nikolaos S. Thomaidis
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Ethanolamines ,Neural Networks, Computer ,Mass Spectrometry ,Analytical Chemistry ,Chromatography, Liquid - Abstract
There is a growing need for indexing and harmonizing retention time (tR) data in liquid chromatography derived under different conditions to aid in the identification of compounds in high resolution mass spectrometry (HRMS) based suspect and nontarget screening of environmental samples. In this study, a rigorously tested, inexpensive, and simple system-independent retention index (RI) approach is presented for liquid chromatography (LC), based on the cocamide diethanolamine homologous series (C(
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- 2022
9. Authenticity and Chemometrics of Olive Oil
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Ioannis C. Martakos, Marios G. Kostakis, Marilena E. Dasenaki, and Nikolaos S. Thomaidis
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- 2022
10. Evaluation of the human exposure to a broad spectrum of organic chemicals and the potential use of sewage sludge to prioritize hazardous substances
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Rubén Gil-Solsona, Maria-Christina Nika, Nikiforos Alygizakis, Mariona Bustamante, Cristina M. Villanueva, Daniel Gutierrez-Martin, Esteban Restrepo, Maria Foraster, Maria Dolores Gómez-Roig, Elisa Llurba-Olive, Jordi Sunyer, Payam Dadvand, Nikolaos S. Thomaidis, and Pablo Gago-Ferrero
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General Earth and Planetary Sciences ,General Environmental Science - Published
- 2022
11. Wide-scope target and suspect screening of emerging contaminants in sewage sludge from Nigerian WWTPs by UPLC-qToF-MS
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Varvara Nikolopoulou, Akinranti S. Ajibola, Reza Aalizadeh, and Nikolaos S. Thomaidis
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Environmental Engineering ,Sewage ,Environmental Chemistry ,Nigeria ,Wastewater ,Pollution ,Waste Management and Disposal ,Mass Spectrometry ,Water Pollutants, Chemical ,Water Purification ,Chromatography, Liquid ,Environmental Monitoring - Abstract
There is currently a paucity of scientific data in Africa on the analysis and occurrence of emerging contaminants in sewage sludge. In this work, the occurrence of European Union (EU) Water Framework Directive priority substances and wide-range emerging contaminants were investigated and discussed comprehensively in the sewage sludge samples from three different wastewater treatment plants (WWTPs) in Lagos, Nigeria. The identification strategy was implemented by target and suspect screening in liquid chromatography-high resolution mass spectrometry. 250 compounds were identified in the sewage sludge samples from the investigated WWTPs. From 250 detected compounds, 182 compounds were quantified, and 78 compounds significantly show high environmental risk score (calculated from provisional no-effect concentrations values (PNEC) as well as their environmental quality data (EQs)). Most of contaminants detected at high amount belong to pharmaceuticals and are from hospital WWTP. While the highest concentration (72.4 mg kg
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- 2022
12. Using environmental monitoring data from apex predators for chemicals management: towards harmonised sampling and processing of archived wildlife samples to increase the regulatory uptake of monitoring data in chemicals management
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Alexander Badry, Jaroslav Slobodnik, Nikiforos Alygizakis, Dirk Bunke, Alessandra Cincinelli, Daniela Claßen, Rene W. R. J. Dekker, Guy Duke, Valeria Dulio, Bernd Göckener, Georgios Gkotsis, Georg Hanke, Morten Jartun, Paola Movalli, Maria-Christina Nika, Heinz Rüdel, Nikolaos S. Thomaidis, Jose V. Tarazona, Victoria Tornero, Gabriele Treu, Katrin Vorkamp, Lee A. Walker, Jan Koschorreck, and Publica
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Archived samples ,Chemicals regulations ,Digital sample freezing platform ,Suspect screening ,Apex predators ,Pollution ,Quality assurance - Abstract
Monitoring data from apex predators were key drivers in the development of early chemicals legislations due to the population declines of many species during the twentieth century, which was linked to certain persistent organic pollutants (POPs). Besides triggering the development of global treaties (e.g. the Stockholm Convention), chemical monitoring data from apex predators have been particularly important for identifying compounds with bioaccumulative properties under field conditions. Many apex predators are protected species and only a few environmental specimen banks (ESBs) regularly collect samples as many ESBs were established during the 1980–1990s when apex predators were scarce. Today, many POPs have been banned, which contributed to the recovery of many apex predator populations. As a consequence, apex predator samples are now available in research collections (RCs) and natural history museums (NHMs). These samples can be used for routine analysis as well as for screening studies using novel analytical techniques and advanced data treatment workflows, such as suspect and non-target screening. The LIFE APEX project has demonstrated how these samples can be used in a cost-efficient way to generate data on legacy compounds and contaminants of emerging concern. Furthermore, it has described quality assurance/control measures to ensure high quality and comparable data, with a view to uses in chemicals risk assessment and management. To increase the visibility of available sample collections and monitoring data from apex predators we developed accessible online database systems. Additionally, the acquired high-resolution mass spectrometric data were stored in a digital sample freezing platform that allows retrospective suspect screening in previously analysed samples for substances that may be of concern/under assessment in the future. These databases provide open access to a wide range of chemical data, for use by regulators, researchers, industry and the general public, and contribute to a stronger link between science and policy.
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- 2022
13. Assessment of selected pharmaceuticals in Riyadh wastewater treatment plants, Saudi Arabia: Mass loadings, seasonal variations, removal efficiency and environmental risk
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Obaid A. Alharbi, Edward Jarvis, Aikaterini Galani, Nikolaos S. Thomaidis, Maria-Christina Nika, and Deborah V. Chapman
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Environmental Engineering ,Environmental Chemistry ,Pollution ,Waste Management and Disposal - Published
- 2023
14. Handling the risk dimensions of wind energy generation
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Nikolaos S. Thomaidis, Theodoros Christodoulou, and Francisco Santos-Alamillos
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General Energy ,Mechanical Engineering ,Building and Construction ,Management, Monitoring, Policy and Law - Published
- 2023
15. A novel thermophile β-galactosidase from Thermothielavioides terrestris producing galactooligosaccharides from acid whey
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Anastasia Zerva, Evangelos Topakas, Nikolaos S. Thomaidis, Anastasia S. Kritikou, Athanasios Limnaios, and Petros Taoukis
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0106 biological sciences ,Food industry ,medicine.medical_treatment ,Sordariales ,Oligosaccharides ,Bioengineering ,01 natural sciences ,Catalysis ,Pichia pastoris ,03 medical and health sciences ,Hydrolysis ,chemistry.chemical_compound ,Whey ,010608 biotechnology ,medicine ,Food science ,Lactose ,Molecular Biology ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,biology ,Chemistry ,business.industry ,Prebiotic ,Thermophile ,General Medicine ,Hydrogen-Ion Concentration ,beta-Galactosidase ,biology.organism_classification ,Enzyme ,business ,Biotechnology - Abstract
β-Galactosidases are key enzymes in the food industry. Apart from the hydrolysis of the saccharide bond of lactose, they also catalyze transgalactosylation reactions, producing galactooligosaccharides (GOS) with prebiotic activity. Here we report the heterologous production in Pichia pastoris of a novel β-galactosidase from the fungus Thermothielavioides terrestris. The enzyme (TtbGal1) was purified and characterized, showing optimal activity at 60 °C and pH 4. TtbGal1 is thermostable, retaining almost full activity for 24 h at 50 °C. It was applied to the production of GOS from defined lactose solutions and acid whey, a liquid waste from the Greek yoghurt industry, reaching yields of 19.4 % and 14.8 %, respectively. HILIC-ESI-QTOF-MS analysis revealed the production of GOS with up to 4 saccharide monomers. The results demonstrate efficient GOS production catalyzed by TtbGal1, valorizing acid whey, a waste with a heavy polluting load from the dairy industry.
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- 2021
16. Development and Analytical Validation of a One-Step Five-Plex RT-ddPCR Assay for the Quantification of SARS-CoV-2 Transcripts in Clinical Samples
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Areti Strati, Martha Zavridou, Dimitrios Paraskevis, Gkikas Magiorkinis, Spyros Sapounas, Pagona Lagiou, Nikolaos S. Thomaidis, and Evi S. Lianidou
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SARS-CoV-2 ,COVID-19 ,Humans ,RNA, Viral ,Reproducibility of Results ,Pandemics ,Sensitivity and Specificity ,Analytical Chemistry - Abstract
Highly sensitive methodologies for SARS-CoV-2 detection are essential for the control of COVID-19 pandemic. We developed and analytically validated a highly sensitive and specific five-plex one-step RT-ddPCR assay for SARS-CoV-2. We first designed in-silico novel primers and probes for the simultaneous absolute quantification of three different regions of the nucleoprotein (
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- 2022
17. First Novel Workflow for Semiquantification of Emerging Contaminants in Environmental Samples Analyzed by Gas Chromatography-Atmospheric Pressure Chemical Ionization-Quadrupole Time of Flight-Mass Spectrometry
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Reza Aalizadeh, Varvara Nikolopoulou, Nikiforos A. Alygizakis, and Nikolaos S. Thomaidis
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Atmospheric Pressure ,Humans ,Dust ,Gas Chromatography-Mass Spectrometry ,Software ,Analytical Chemistry ,Workflow - Abstract
The ionization efficiency of emerging contaminants was modeled for the first time in gas chromatography-high-resolution mass spectrometry (GC-HRMS) which is coupled to an atmospheric pressure chemical ionization source (APCI). The recent chemical space has been expanded in environmental samples such as soil, indoor dust, and sediments thanks to recent use of high-resolution mass spectrometric techniques; however, many of these chemicals have remained unquantified. Chemical exposure in dust can pose potential risk to human health, and semiquantitative analysis is potentially of need to semiquantify these newly identified substances and assist with their risk assessment and environmental fate. In this study, a rigorously tested semiquantification workflow was proposed based on GC-APCI-HRMS ionization efficiency measurements of 78 emerging contaminants. The mechanism of ionization of compounds in the APCI source was discussed via a simple connectivity index and topological structure. The quantitative structure-property relationship (QSPR)-based model was also built to predict the APCI ionization efficiencies of unknowns and later use it for their quantification analyses. The proposed semiquantification method could be transferred into the household indoor dust sample matrix, and it could include the effect of recovery and matrix in the predictions of actual concentrations of analytes. A suspect compound, which falls inside the application domain of the tool, can be semiquantified by an online web application, free of access at http://trams.chem.uoa.gr/semiquantification/.
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- 2022
18. Advanced throughput analytical strategies for the comprehensive HRMS screening of organic micropollutants in eggs of different bird species
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Georgios Gkotsis, Maria-Christina Nika, Antonia I. Athanasopoulou, Konstantinos Vasilatos, Nikiforos Alygizakis, Martin Boschert, Raphaela Osterauer, Kai-Achim Höpker, and Nikolaos S. Thomaidis
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Environmental Engineering ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,General Medicine ,General Chemistry ,Pollution ,Gas Chromatography-Mass Spectrometry ,Mass Spectrometry ,Birds ,Environmental Chemistry ,Animals ,Environmental Pollutants ,Ecosystem ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Raptors are ideal indicators for biomonitoring studies using wildlife in order to assess the environmental pollution in the terrestrial ecosystem, since they are placed in the highest trophic position in the food webs and their life expectancy is relatively long. In this study, 26 eggs of 4 bird species (Peregrine falcon, Eurasian curlew, Little owl and Eagle owl) collected in Germany, were investigated for the presence of persistent organic pollutants (POPs) and thousands of contaminants of emerging concern (CECs). Generic sample preparation protocols were followed for the extraction of the analytes and the purification of the extracts, and the samples were analyzed both by liquid (LC) and gas chromatography (GC) coupled to high resolution mass spectrometry (HRMS), for capturing a wide range of organic micropollutants with different physicochemical properties. State-of-the-art screening methodologies were applied in the acquired HRMS data, including wide-scope target analysis of 2448 known pollutants and suspect screening of over 65,000 environmentally relevant compounds. Overall, 58 pollutants from different chemical classes, such as plant protection products, per- and polyfluoroalkyl substances and medicinal products, as well as their transformation products, were determined through target analysis. Most of the detected compounds were lipophilic (logP2), although the presence of (semi)polar contaminants should not be overlooked, underlying the need for holistic analytical approaches in environmental monitoring studies. p,p'-DDE, PCB 153 and PCB138, PFOS and methylparaben were the most frequently detected compounds. 50 additional substances were identified and semi-quantified through suspect screening workflows, including mainly compounds of industrial use with high production volume.
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- 2022
19. Effectiveness of tertiary treatment processes in removing different classes of emerging contaminants from domestic wastewater
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Olga S. Arvaniti, Marilena E. Dasenaki, Alexandros G. Asimakopoulos, Niki C. Maragou, Vasilios G. Samaras, Korina Antoniou, Georgia Gatidou, Daniel Mamais, Constantinos Noutsopoulos, Zacharias Frontistis, Nikolaos S. Thomaidis, and Athanasios S. Stasinakis
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General Environmental Science - Published
- 2022
20. LogD-based modelling and ΔlogD as a proxy for pH-dependent action of ionizable chemicals reveal the relevance of both neutral and ionic species for fish embryotoxicity and possess great potential for practical application in the regulation of chemicals
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Heinz-R. Köhler, Thomas Gräff, Mona Schweizer, Jasmin Blumhardt, Jasmin Burkhardt, Lisa Ehmann, Janine Hebel, Christoph Heid, Lone Kundy, Julia Kuttler, Miroslava Malusova, Friederike-Marie Moroff, Anne-Frida Schlösinger, Pia Schulze-Berge, Eleni I. Panagopoulou, Dimitrios E. Damalas, Nikolaos S. Thomaidis, Rita Triebskorn, Dirk Maletzki, Ute Kühnen, and Peter C. von der Ohe
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Environmental Engineering ,Ecological Modeling ,Pollution ,Waste Management and Disposal ,Water Science and Technology ,Civil and Structural Engineering - Published
- 2023
21. The importance of in-year seasonal fluctuations for biomonitoring of apex predators: A case study of 14 essential and non-essential elements in the liver of the common buzzard (Buteo buteo) in the United Kingdom
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Shinji Ozaki, Paola Movalli, Alessandra Cincinelli, Nikiforos Alygizakis, Alexander Badry, Jacqueline S. Chaplow, Daniela Claßen, René W.R. J. Dekker, Beverley Dodd, Guy Duke, Jan Koschorreck, M. Glória Pereira, Elaine Potter, Jaroslav Slobodnik, Sarah Thacker, Nikolaos S. Thomaidis, Gabriele Treu, and Lee Walker
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Health, Toxicology and Mutagenesis ,General Medicine ,Toxicology ,Pollution - Published
- 2023
22. Non-target screening of emerging contaminants in landfills: A review
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Maria-Christina Nika, Nikiforos Alygizakis, Olga S. Arvaniti, and Nikolaos S. Thomaidis
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Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,Environmental Chemistry - Published
- 2023
23. Effect of Temperature and Yeast on the Formation of Coumarin in Bakery Ware Containing Mahaleb. A Fully Validated Approach
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Antony C. Calokerinos, Charalampos Proestos, Evangelia Krystalli, Nikolaos S. Thomaidis, and Efstratios Komaitis
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chemistry.chemical_compound ,Chemistry ,Biochemistry (medical) ,Clinical Biochemistry ,Electrochemistry ,Natural source ,Food science ,Coumarin ,Biochemistry ,Spectroscopy ,Yeast ,Analytical Chemistry - Abstract
Mahaleb, which is a spice with culinary use in Eastern and Mediterranean countries, is a natural source of coumarin. Its presence in bakery ware has not yet been studied, despite the fact that it i...
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- 2021
24. Application of High Resolution Mass Spectrometric methods coupled with chemometric techniques in olive oil authenticity studies - A review
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Marilena E. Dasenaki, Nikolaos S. Thomaidis, Natasa P. Kalogiouri, and Reza Aalizadeh
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02 engineering and technology ,computer.software_genre ,01 natural sciences ,Biochemistry ,Mass Spectrometry ,Analytical Chemistry ,Chemometrics ,Environmental Chemistry ,Olive Oil ,Spectroscopy ,Reliability (statistics) ,Principal Component Analysis ,Chemistry ,010401 analytical chemistry ,Discriminant Analysis ,Reproducibility of Results ,Experimental data ,021001 nanoscience & nanotechnology ,Linear discriminant analysis ,0104 chemical sciences ,Random forest ,Hierarchical clustering ,Support vector machine ,Principal component analysis ,Data mining ,0210 nano-technology ,computer - Abstract
Extra Virgin Olive Oil (EVOO), the emblematic food of the Mediterranean diet, is recognized for its nutritional value and beneficial health effects. The main authenticity issues associated with EVOO's quality involve the organoleptic properties (EVOO or defective), mislabeling of production type (organic or conventional), variety and geographical origin, and adulteration. Currently, there is an emerging need to characterize EVOOs and evaluate their genuineness. This can be achieved through the development of analytical methodologies applying advanced "omics" technologies and the investigation of EVOOs chemical fingerprints. The objective of this review is to demonstrate the analytical performance of High Resolution Mass Spectrometry (HRMS) in the field of food authenticity assessment, allowing the determination of a wide range of food constituents with exceptional identification capabilities. HRMS-based workflows used for the investigation of critical olive oil authenticity issues are presented and discussed, combined with advanced data processing, comprehensive data mining and chemometric tools. The use of unsupervised classification tools, such as Principal Component Analysis (PCA) and Hierarchical Clustering Analysis (HCA), as well as supervised classification techniques, including Linear Discriminant Analysis (LDA), Support Vector Machine (SVM), Partial Least Square Discriminant Analysis (PLS-DA), Orthogonal Projection to Latent Structure-Discriminant Analysis (OPLS-DA), Counter Propagation Artificial Neural Networks (CP-ANNs), Self-Organizing Maps (SOMs) and Random Forest (RF) is summarized. The combination of HRMS methodologies with chemometrics improves the quality and reliability of the conclusions from experimental data (profile or fingerprints), provides valuable information suggesting potential authenticity markers and is widely applied in food authenticity studies.
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- 2020
25. Nationwide surveillance of azole-resistant Aspergillus fumigatus environmental isolates in Greece: detection of pan-azole resistance associated with the TR46/Y121F/T289A cyp51A mutation
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Ana Alastruey-Izquierdo, Spyros Pournaras, Georgios Gkotsis, Maria Siopi, Joseph Meletiadis, Olga Rivero-Menendez, Anthi Panara, and Nikolaos S. Thomaidis
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Azoles ,Microbiology (medical) ,Posaconazole ,Antifungal Agents ,Itraconazole ,Aspergillus flavus ,Microbial Sensitivity Tests ,Aspergillus fumigatus ,Microbiology ,Fungal Proteins ,Drug Resistance, Fungal ,medicine ,Pharmacology (medical) ,Aspergillus terreus ,Pharmacology ,chemistry.chemical_classification ,Aspergillus ,Greece ,biology ,Aspergillus niger ,biology.organism_classification ,Infectious Diseases ,chemistry ,Mutation ,Azole ,medicine.drug - Abstract
Background Acquired azole resistance (AR) in Aspergillus fumigatus emphasizes the importance of the One Health multisectorial approach. The prevalence of azole-resistant A. fumigatus in the environment of Greece is unknown. Methods Between October 2016 and September 2017, a total of 716 soil samples were collected from 23 provinces and screened for AR using azole-containing agar plates. Recovered isolates were macro-/microscopically identified and colonies were counted. Azole susceptibility testing of A. fumigatus species complex (SC) isolates was performed (EUCAST E.DEF9.3.1). Azole-resistant A. fumigatus isolates were subjected to confirmatory molecular identification and sequencing of the cyp51A gene. Results No yeasts were recovered, while multiple moulds grew on 695 (97%) samples. Overall, zygomycetes (most non-Mucor genera) grew on 432 (60%) samples, while Aspergillus spp. grew on 500 (70%) [410 (57%) Aspergillus niger SC; 120 (17%) Aspergillus terreus SC; 101 (14%) A. fumigatus SC; 34 (5%) Aspergillus flavus SC]. The mean ± SD soil load of Aspergillus spp. was 2.23 ± 0.41 log10 cfu/g (no differences among species). No azole-resistant non-A. fumigatus spp. isolate was detected. Itraconazole, voriconazole, isavuconazole and posaconazole MIC50/MIC90 (MIC range) of A. fumigatus SC strains were 0.25/0.5 (0.25 to >8), 0.5/1 (0.25 to >8), 1/1 (0.125 to >8) and 0.06/0.125 (0.06–1) mg/L, respectively. Overall, 1/500 (0.2%) of Aspergillus isolates, and 1/101 (1%) of A. fumigatus SC isolates, was pan-azole-resistant (itraconazole, voriconazole, isavuconazole and posaconazole MIC >8, >8, >8 and 1 mg/L, respectively). The resistant isolate was recovered from organically grown raisin grapes treated with homemade compost and it was an A. fumigatus sensu stricto isolate harbouring the TR46/Y121F/T289A mutation. The soil’s load was higher compared with azole-susceptible strains (3.74 versus 2.09 log10 cfu/g). Conclusions This is the first known report of environmental pan-azole-resistant A. fumigatus in Greece. Since data on Greek clinical isolates are lacking, this finding must alarm the systematic local surveillance of AR in medical settings.
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- 2020
26. A novel nested design approach for estimation of uncertainty arising from sampling in feed
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Evangelia Kritikou, Marios Kostakis, Nikolaos S. Thomaidis, and Anastasia Koupa
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Estimation ,General Chemical Engineering ,010401 analytical chemistry ,Nested analysis ,Sampling (statistics) ,Sample (statistics) ,General Chemistry ,Variance (accounting) ,01 natural sciences ,0104 chemical sciences ,010309 optics ,Nested design ,0103 physical sciences ,Particle diameter ,Statistics ,Analysis of variance ,Safety, Risk, Reliability and Quality ,Instrumentation ,Mathematics - Abstract
Uncertainty arising from sampling is nowadays a controversial issue, if it is necessary to be taken into account in total uncertainty. As in the quantification of analysis uncertainty, there are two principal approaches in order to estimate uncertainty of sampling: the bottom-up and the top-down approach. A novel top-down approach for sampling uncertainty is proposed in this study using nested analysis of variance (ANOVA). Determination of the oxytetracycline (OTC) content in feed was utilized for estimating uncertainty arising from sampling using the new approach. The advantage of nested ANOVA is that the effect of every factor on the total uncertainty can be calculated. In the present study, factors such as physical preparation of sample, lots of production and particle diameter were examined in the experimental design. It was found that the effect of different lots had the highest uncertainty among the factors. Finally, the results of nested ANOVA were compared with the uncertainty calculated using other top-down approaches. Classical ANOVA and robust ANOVA (RANOVA) did not show significant differences in their results. On the other hand, nested ANOVA estimated higher uncertainty of sampling in comparison with the other approaches.
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- 2020
27. Antihypertensive activity and molecular interactions of irbesartan in complex with 2‐hydroxypropyl‐β‐cyclodextrin
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Dimitrios Ntountaniotis, Eirini Christodoulou, Dimitrios Damalas, Georgios Liapakis, Georgia Valsami, Vlasios Karageorgos, Nikolaos Naziris, Nikolaos S. Thomaidis, Thomas Mavromoustakos, Maria V. Chatziathanasiadou, Andreas G. Tzakos, Maria Chountoulesi, Georgios Leonis, and Costas Demetzos
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Spectrometry, Mass, Electrospray Ionization ,Drug Compounding ,Molecular Conformation ,Molecular Dynamics Simulation ,01 natural sciences ,Biochemistry ,Irbesartan ,2 hydroxypropyl β cyclodextrin ,Drug Discovery ,medicine ,Humans ,Beneficial effects ,Antihypertensive Agents ,Pharmacology ,Molecular interactions ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Combinatorial chemistry ,2-Hydroxypropyl-beta-cyclodextrin ,0104 chemical sciences ,Drug Liberation ,010404 medicinal & biomolecular chemistry ,Freeze Drying ,Solubility ,Drug delivery ,Lipophilicity ,Molecular Medicine ,medicine.drug - Abstract
Irbesartan (IRB) exerts beneficial effects either alone or in combination with other drugs on numerous diseases, such as cancer, diabetes, and hypertension. However, due to its high lipophilicity, IRB does not possess the optimum pharmacological efficiency. To circumvent this problem, a drug delivery system with 2-hydroxypropyl-β-cyclodextrin (2-HP-β-CD) was explored. The 1:1 complex between IRB and 2-HP-β-CD was identified through ESI QTF HRMS. Dissolution studies showed a higher dissolution rate of the lyophilized IRB-2-HP-β-CD complex than the tablet containing IRB at pH = 1.2. DSC results revealed the differences of the thermal properties between the complex and various mixtures consisting of the two components, namely IRB and 2-HP-β-CD. Interestingly, depending on the way the mixture preparation was conducted, different association between the two components was observed. Molecular dynamics (MD) simulations predicted the favorable formation of the above complex and identified the dominant interactions between IRB and 2-HP-β-CD. In vitro pharmacological results verified that the inclusion complex not only preserves the binding affinity of IRB for AT1R receptor, but also it slightly increases it. As the complex formulation lacks the problems of the tablet, our approach is a promising new way to improve the efficiency of IRB.
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- 2020
28. Assessment of the chemical pollution status of the Dniester River Basin by wide-scope target and suspect screening using mass spectrometric techniques
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Konstantina Diamanti, Nikiforos A. Alygizakis, Maria-Christina Nika, Martina Oswaldova, Jaroslav Slobodnik, Nikolaos S. Thomaidis, and Peter Oswald
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Pollutant ,geography ,geography.geographical_feature_category ,010401 analytical chemistry ,chemistry.chemical_element ,02 engineering and technology ,Pesticide ,021001 nanoscience & nanotechnology ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Analytical Chemistry ,Mercury (element) ,Wastewater ,chemistry ,Water Framework Directive ,Environmental chemistry ,Tributary ,Environmental science ,0210 nano-technology ,Surface water ,Inductively coupled plasma mass spectrometry - Abstract
The quality of the Dniester River Basin has been seriously impacted by the chemicals released by agriculture, industry, and wastewater discharges. To assess its current chemical pollution status, a transboundary monitoring campaign was conducted in May 2019. Thirteen surface water, 13 sediment, and three biota samples were collected and analyzed using generic sample preparation methods for the determination of organic substances by liquid chromatography high-resolution mass spectrometry (LC-HRMS) and metals by inductively coupled plasma mass spectrometry (ICP-MS). Wide-scope target and suspect screening resulted in detection of Water Framework Directive (WFD) priority substances and emerging contaminants, whereas the raw data were stored in NORMAN Digital Sample Freezing Platform (DSFP) for future retrospective screening. Furthermore, risk assessment was performed to prioritize detected substances and propose a draft list of river basin–specific pollutants. All studied metals (As, Hg, Zn, Cu, Cr, Cd, Pb, Ni) were detected in the surface water and sediments. In total, 139 organic contaminants belonging to various chemical classes (pesticides, pharmaceuticals, drugs of abuse, stimulants, sweeteners, industrial chemicals, and their transformation products) were detected. The highest cumulative concentration of contaminants was observed in surface water from the Byk River, a tributary of the Dniester (Moldova). Concentrations of WFD priority substances diuron and mercury and EU Watch List neonicotinoid compounds imidacloprid and thiamethoxam exceeded their environmental quality standards (EQS), whereas concentrations of 23 emerging substances exceeded their predicted no-effect concentration (PNEC) at minimum one site. Emerging contaminants telmisartan, metolachlor, terbuthylazine, and 4-acetamidoantipyrine were prioritized as potential river basin–specific pollutants.
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- 2020
29. A novel workflow for semi-quantification of emerging contaminants in environmental samples analyzed by LC-HRMS
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Reza Aalizadeh, Varvara Nikolopoulou, Nikiforos Alygizakis, Jaroslav Slobodnik, and Nikolaos S. Thomaidis
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Seawater ,Biochemistry ,Mass Spectrometry ,Analytical Chemistry ,Chromatography, Liquid ,Workflow - Abstract
There is an increasing need for developing a strategy to quantify the newly identified substances in environmental samples, where there are not always reference standards available. The semi-quantitative analysis can assist risk assessment of chemicals and their environmental fate. In this study, a rigorously tested and system-independent semi-quantification workflow is proposed based on ionization efficiency measurement of emerging contaminants analyzed in liquid chromatography-high-resolution mass spectrometry. The quantitative structure-property relationship (QSPR)-based model was built to predict the ionization efficiency of unknown compounds which can be later used for their semi-quantification. The proposed semi-quantification method was applied and tested in real environmental seawater samples. All semi-quantification-related calculations can be performed online and free of access at http://trams.chem.uoa.gr/semiquantification/ .
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- 2022
30. High Resolution Mass Spectrometric Suspect Screening, Wide-Scope Target Analysis of Emerging Contaminants and Determination of Legacy Pollutants in Adult Western Black-Tailed Godwit Limosa Limosa Limosa in the Netherlands – a Pilot Study
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Paola Movalli, Koos Biesmeijer, Georgios Gkotsis, Jaroslav Slobodnik, Maria-Christina Nika, Kostantinos Vasilatos, Marios Kostakis, Nikolaos S. Thomaidis, Peter Oswald, Martina Oswaldova, Nikiforos A. Alygizakis, Natalia Glowacka, Jos Hooijmeijer, Ruth Howison, Rene Dekker, Nico van den Brink, and Theunis Piersma
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History ,Polymers and Plastics ,Business and International Management ,Industrial and Manufacturing Engineering - Published
- 2022
31. Target and Suspect Screening of 4,777 Per- and Polyfluoroalkyl Substances (Pfas) in River Water, Wastewater, Groundwater and Biota Samples in the Danube River Basin
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Nikiforos Alygizakis, Kelsey Ng, Andreas Androulakakis, Aikaterini Galani, Reza Aalizadeh, Nikolaos S. Thomaidis, and Nikiforos A. Alygizakis
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- 2022
32. Development of Two-Level Design of Experiments (DoE) for the Optimization of a HS-SPME-GCMS Method to Study Greek Monovarietal PDO and PGI Wines
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Maria Marinaki, Ioannis Sampsonidis, Artemis Lioupi, Panagiotis Arapitsas, Nikolaos S. Thomaidis, Kyriaki G. Zinoviadou, and Georgios Theodoridis
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- 2022
33. Socioeconomic status and public health in Australia: A wastewater-based study
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Nikolaos I. Rousis, Zhe Li, Richard Bade, Michael S. McLachlan, Jochen F. Mueller, Jake W. O'Brien, Saer Samanipour, Benjamin J. Tscharke, Nikolaos S. Thomaidis, Kevin V. Thomas, HIMS Other Research (FNWI), and Analytical Chemistry and Forensic Science (HIMS, FNWI)
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Sotalol ,Australia ,Wastewater-based epidemiology ,Venlafaxine ,Wastewater ,Diabetes Mellitus, Type 2 ,Social Class ,Socioeconomic Factors ,Cardiovascular Diseases ,Humans ,Sitagliptin ,Public Health ,Atenolol acid ,General Environmental Science ,Metoprolol - Abstract
Analysis of untreated municipal wastewater is recognized as an innovative approach to assess population exposure to or consumption of various substances. Currently, there are no published wastewater-based studies investigating the relationships between catchment social, demographic, and economic characteristics with chemicals using advanced non-targeted techniques. In this study, fifteen wastewater samples covering 27% of the Australian population were collected during a population Census. The samples were analysed with a workflow employing liquid chromatography high-resolution mass spectrometry and chemometric tools for non-target analysis. Socioeconomic characteristics of catchment areas were generated using Geospatial Information Systems software. Potential correlations were explored between pseudo-mass loads of the identified compounds and socioeconomic and demographic descriptors of the wastewater catchments derived from Census data. Markers of public health (e.g., cardiac arrhythmia, cardiovascular disease, anxiety disorder and type 2 diabetes) were identified in the wastewater samples by the proposed workflow. They were positively correlated with descriptors of disadvantage in education, occupation, marital status and income, and negatively correlated with descriptors of advantage in education and occupation. In addition, markers of polypropylene glycol (PPG) and polyethylene glycol (PEG) related compounds were positively correlated with housing and occupation disadvantage. High positive correlations were found between separated and divorced people and specific drugs used to treat cardiac arrhythmia, cardiovascular disease, and depression. Our robust non-targeted methodology in combination with Census data can identify relationships between biomarkers of public health, human behaviour and lifestyle and socio-demographics of whole populations. Furthermore, it can identify specific areas and socioeconomic groups that may need more assistance than others for public health issues. This approach complements important public health information and enables large-scale national coverage with a relatively small number of samples., This project has received funding from the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska–Curie Grant Agreement No. 896141.
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- 2022
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34. Battery of In Vitro Bioassays: A Case Study for the Cost-Effective and Effect-Based Evaluation of Wastewater Effluent Quality
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Nikiforos Alygizakis, Kelsey Ng, Niki Maragou, Sylvana Alirai, Peter Behnisch, Harrie Besselink, Peter Oswald, Ľuboš Čirka, Nikolaos S. Thomaidis, and Jaroslav Slobodnik
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toxicity endpoints ,effect-based trigger values ,drinking water ,Geography, Planning and Development ,environmental risk assessment ,wastewater treatment plants ,Aquatic Science ,risk management ,Biochemistry ,organic micropollutants ,Danube River Basin ,endocrine-disrupting compounds ,mixture toxicity ,Water Science and Technology - Abstract
Wastewater treatment plants (WWTPs) represent an important input of contaminants in the environment. Therefore, it is critical to continuously monitor the performance of WWTPs to take appropriate action and avoid an influx of contaminants in the environment. In this study, a battery of seven in vitro bioassays covering a selected spectrum of toxicity effects is proposed for quality control of wastewater effluents. The bioassays address mixture toxicity, which is the combined adverse effect of multiple contaminants and can act as an early warning system. The proposed battery was applied to samples from 11 WWTPs of representative technology from the Danube River Basin (DRB). The order of toxic effects in terms of extent of exceedance of effect-based trigger values (EBTs) was PAH (PAH activity) > PXR (xenobiotic metabolism) > ERα (estrogenic activity) > PPARγ > Nrf2 (oxidative stress) > anti-AR > GR. A mitigation plan for WWTP operators based on EBT exceedance is proposed. This study demonstrates that the proposed effect-based monitoring battery is a complementary tool to the chemical analysis approach. A regular application of such time- and cost-effective bioanalytical tools in the WWTPs of the DRB is proposed to provide a ‘safety net’ for aquatic ecosystems.
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- 2023
35. Trapped Ion Mobility Incorporated in LC-HRMS Workflows as an Integral Analytical Platform of High Sensitivity: Targeted and Untargeted 4D-Metabolomics in Extra Virgin Olive Oil
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Sofia K. Drakopoulou, Dimitrios E. Damalas, Carsten Baessmann, and Nikolaos S. Thomaidis
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Tandem Mass Spectrometry ,Metabolomics ,General Chemistry ,General Agricultural and Biological Sciences ,Olive Oil ,Chromatography, Liquid ,Workflow - Abstract
Trapped ion mobility spectrometry (TIMS) is a promising technique for the separation of isomers based on their mobility. In the present work, TIMS coupled to liquid chromatography (LC) and high-resolution mass spectrometry (HRMS) was applied as a comprehensive analytical platform to address authenticity challenges, focusing on extra virgin olive oil (EVOO). Isomers detected in EVOO's phenolic fraction, classified into secoiridoids group, were successfully separated. Thanks to parallel accumulation serial fragmentation (PASEF) acquisition mode, high-quality spectra were obtained, facilitating identification. Moreover, a four-dimensional (4D) untargeted metabolomics approach was implemented to evaluate EVOO's global profile in cases of both variety and geographical origin discrimination. Potential authenticity markers, attributed to isomers, were successfully identified through the proposed workflow that incorporates ion mobility information along with LC-HRMS analytical evidence (i.e., mass accuracy, retention time, isotopic pattern, MS/MS fragmentation). Our study establishes LC-TIMS-HRMS in food authenticity and highlights mobility-enhanced metabolomics in four dimensions.
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- 2021
36. Making use of apex predator sample collections: an integrated workflow for quality assured sample processing, analysis and digital sample freezing of archived samples
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Alexander Badry, Heinz Rüdel, Bernd Göckener, Maria-Christina Nika, Nikiforos Alygizakis, Georgios Gkotsis, Nikolaos S. Thomaidis, Gabriele Treu, Rene W.R.J. Dekker, Paola Movalli, Lee A. Walker, Elaine D. Potter, Alessandra Cincinelli, Tania Martellini, Guy Duke, Jaroslav Slobodnik, Jan Koschorreck, and Publica
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Quality Control ,Environmental Engineering ,Health, Toxicology and Mutagenesis ,Public Health, Environmental and Occupational Health ,General Medicine ,General Chemistry ,Pollution ,Ecology and Environment ,Quality assurance ,Workflow ,Specimen Handling ,Apex predator ,Chemistry ,European sample collections ,Freezing ,Data and Information ,Non-target screening ,Environmental Chemistry ,Digital sample freezing platform ,Environmental Monitoring - Abstract
Using monitoring data from apex predators for chemicals risk assessment can provide important information on bioaccumulating as well as biomagnifying chemicals in food webs. A survey among European institutions involved in chemical risk assessment on their experiences with apex predator data in chemical risk assessment revealed great interest in using such data. However, the respondents indicated that constraints were related to expected high costs, lack of standardisation and harmonised quality criteria for exposure assessment, data access, and regulatory acceptance/application. During the Life APEX project, we demonstrated that European sample collections (i.e. environmental specimen banks (ESBs), research collection (RCs), natural history museums (NHMs)) archive a large variety of biological samples that can be readily used for chemical analysis once appropriate quality assurance/control (QA/QC) measures have been developed and implemented. We therefore issued a second survey on sampling, processing and archiving procedures in European sample collections to derive key quality QA/QC criteria for chemical analysis. The survey revealed great differences in QA/QC measures between ESBs, NHMs and RCs. Whereas basic information such as sampling location, date and biometric data were mostly available across institutions, protocols to accompany the sampling strategy with respect to chemical analysis were only available for ESBs. For RCs, the applied QA/QC measures vary with the respective research question, whereas NHMs are generally less aware of e.g. chemical cross-contamination issues. Based on the survey we derived key indicators for assessing the quality of biota samples that can be easily implemented in online databases. Furthermore, we provide a QA/QC workflow not only for sampling and processing but also for the chemical analysis of biota samples. We focussed on comprehensive analytical techniques such as non-target screening and provided insights into subsequent storage of high-resolution chromatograms in online databases (i.e. digital sample freezing platform) to ultimately support chemicals risk assessment.
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- 2022
37. Heart rate as an early warning parameter and proxy for subsequent mortality in Danio rerio embryos exposed to ionisable substances
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Ute Kühnen, Peter C. von der Ohe, Rita Triebskorn, Julia Kuttler, Christoph Heid, Dimitrios Damalas, Elena Panagopoulou, Anne-Frida Schlösinger, Janine Hebel, Thomas Gräff, Lone Kundy, Mona Schweizer, Pia Schulze-Berge, Nikolaos S. Thomaidis, Friederike-Marie Moroff, and Heinz-R. Köhler
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Environmental Engineering ,Toxicodynamics ,Embryo, Nonmammalian ,Chemistry ,Propranolol ,Pharmacology ,Pollution ,Acute toxicity ,Aquatic toxicology ,Standard error ,Heart Rate ,Toxicity ,Heart rate ,medicine ,Toxicity Tests, Acute ,Environmental Chemistry ,Animals ,Waste Management and Disposal ,Water Pollutants, Chemical ,Zebrafish ,Metoprolol ,medicine.drug - Abstract
Environmental risk assessments of organic chemicals usually do not consider pH as a key factor. Hence, most substances are tested at a single pH only, which may underestimate the toxicity of ionisable substances with a pKa in the range of 4–10. Thus, the ability to consider the pH-dependent toxicity would be crucial for a more realistic assessment. Moreover, there is a tendency in acute toxicity tests to focus on mortality only, while little attention is paid to sublethal endpoints. We used Danio rerio embryos exposed to ten ionisable substances (the acids diclofenac, ibuprofen, naproxen and triclosan and the bases citalopram, fluoxetine, metoprolol, propranolol, tramadol and tetracaine) at four external pH levels, investigating the endpoints mortality (LC50) and heart rate (EC20). Dose-response curves were fitted with an ensemble-model to determine the true uncertainty and variation around the mean endpoints. The ensemble considers eight (heart rate) or twelve (mortality) individual models for binominal and Poisson distributed data, respectively, selected based on the Akaike Information Criterion (AIC). In case of equally good models, the mean endpoint of all models in the ensemble was calculated, resulting in more robust ECx estimates with lower ‘standard errors’ as compared to randomly selected individual models. We detected a high correlation between mortality (LC50) at 96 hpf and reduced heart rate (EC20) at 48 hpf for all compounds and all external pH levels (r = 0.98). Moreover, the observed pH-dependent effects were strongly associated with log D and thus, likely driven by differences in uptake (toxicokinetic) rather than internal (toxicodynamic) processes. Prospectively, the a priori consideration of pH-dependent effects of ionisable substances might make testing at different pH levels redundant, while the endpoint of mortality might even be replaced by a reliable sublethal proxy that would reduce the exposure, accelerating the evaluation process.
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- 2021
38. TrendProbe: Time profile analysis of emerging contaminants by LC-HRMS non-target screening and deep learning convolutional neural network
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Varvara Nikolopoulou, Reza Aalizadeh, Maria-Christina Nika, and Nikolaos S. Thomaidis
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Environmental Engineering ,Deep Learning ,Rivers ,Health, Toxicology and Mutagenesis ,Environmental Chemistry ,Neural Networks, Computer ,Pollution ,Waste Management and Disposal ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Peak prioritization is one of the key steps in non-target screening of environmental samples to direct the identification efforts to relevant and important features. Occurrence of chemicals is sometimes a function of time and their presence in consecutive days (trend) reveals important aspects such as discharges from agricultural, industrial or domestic activities. This study presents a validated computational framework based on deep learning conventional neural network to classify trends of chemicals over 30 consecutive days of sampling in two sampling sites (upstream and downstream of a river). From trend analysis and factor analysis, the chemicals could be classified into periodic, spill, increasing, decreasing and false trend. The developed method was validated with list of 42 reference standards (target screening) and applied to samples. 25 compounds were selected by the deep learning and identified via non-target screening. Three classes of surfactants were identified for the first time in river water and two of them were never reported in the literature. Overall, 21 new homologous series of the newly identified surfactants were tentatively identified. The aquatic toxicity of the identified compounds was estimated by in silico tools and a few compounds along with their homologous series showed potential risk to aquatic environment.
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- 2021
39. Water hardness and its impact on arterial stiffness and carotid atherosclerotic burdens; insights from the 'Corinthia study'
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Ariadne Argyraki, E Christoforatou, Athina Goliopoulou, E Oikonomou, Zacharenia Kypritidou, Marios Kostakis, Dimitrios Tousoulis, Georgia Vogiatzi, Panagiotis Theofilis, G Vavouranaki, C H Chasikidis, Vasiliki-Xara Mystakidi, G Lazaros, and Nikolaos S. Thomaidis
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medicine.medical_specialty ,business.industry ,Internal medicine ,medicine ,Arterial stiffness ,Cardiology ,Cardiology and Cardiovascular Medicine ,medicine.disease ,business - Abstract
Introduction It has been long investigated the potential role of water quality in cardiovascular health. Purpose The aim of this study was to examine the association between water hardness, arterial stiffness and atheromatic burden in carotid arteries. Design and methods Corinthia study is a cross-sectional epidemiological study conducted in subjects aged 40–99 years. Intima media thickness (IMT) was measured in the left and right common carotid artery, carotid bulb and internal carotid artery. The average of the measurements (mean IMT) and the maximum IMT were determined as the representative value of carotid atherosclerosis burden. Pulse wave velocity (PWV) was used to evaluate arterial stiffness. Tap-water samples were collected from the study area, and analyzed for major, minor and trace elements, as well as pH and total hardness. Results In this analysis we included data from 1.404 participants. In subjects consuming water with a hardness above 250mg/dL, especially in those above >65 years old maximum and mean IMT was significantly increased compared to those consuming water with a hardness above 250mg/dL (1.61mm vs. 1.34mm respectively, p Conclusions There seem to be a negative association between extra hard water and carotid atheromatic burden highlighting the possible impact of water quality in cardiovascular health. Funding Acknowledgement Type of funding sources: None. Table 1
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- 2021
40. Simultaneous Or Sequential Multi-Element Graphite Furnace Atomic Absorption Spectrometry Techniques: Advances Within The Last 20 Years
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Nikolaos S. Thomaidis, Nikolaos I. Rousis, Ioannis N. Pasias, and Aikaterini K. Psoma
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Chemistry ,Analytical chemistry ,Mass spectrometry ,Graphite furnace atomic absorption ,Multi element ,Spectroscopy - Abstract
Electrothermal or graphite furnace atomic absorption spectrometry (ETAAS or GFAAS) is one of the most widely used techniques for determining elements in different matrices (e.g., foodstuffs, pharmaceuticals, biological specimens, nanomaterials, polymers, fuels and environmental media). Numerous elements can be simply and quickly determined with high precision and accuracy, low detection limits, and at moderate cost. The technique is also suitable for direct solid and slurry sample analysis. A crucial feature of this technique is that it can perform simultaneous or sequential multi-element analysis. Over the years, many instruments have come on the market for multi-elemental analysis using mostly line source (LS) GFAAS and high-resolution continuum source (HR-CS) GFAAS. This review covers publications from 2000 to 2020related to the simultaneous or sequential multi-elemental analysis by LS-GFAAS and HR-CS-GFAAS. Mainly the applications, the limits of detection, the use of internal standardization and other aspects regarding the matrix, pyrolysis and atomization temperatures and modifiers are discussed. Finally, a critical comparison is made between the LS-GFAAS and HR-CS-GFAAS techniques.
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- 2021
41. Mineralocorticoid receptor signaling is implicated in carfilzomib-induced increase in blood pressure
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Constantinos A. Dimitriou, Nikolaos S. Thomaidis, M.A. Dimopoulos, Panagiota-Efstathia Nikolaou, Evangelos Gikas, S Lamprou, A Christodoulou, Efstathios Kastritis, Panagiotis Efentakis, Manousos Makridakis, E. Terpos, Ioanna Andreadou, I Barla, A Vlachou, and Charikleia Gakiopoulou
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chemistry.chemical_compound ,Blood pressure ,Mineralocorticoid receptor ,chemistry ,business.industry ,Medicine ,Pharmacology ,Cardiology and Cardiovascular Medicine ,business ,Carfilzomib - Abstract
Introduction Carfilzomib (Cfz), an irreversible proteasome inhibitor, is a first line antineoplastic agent indicated for relapsed/refractory multiple myeloma, with its clinical use being hampered by cardiovascular adverse effects. Hypertension, is the most common cardiovascular side effect of Cfz, remaining of unknown pathogenicity. Purpose Considering that management of Cfz-related hypertension remains an unmet clinical need and that renal function plays a pivotal role in blood pressure regulation we sought to investigate the renal contribution in Cfz-induced hypertension. Methods We have previously established a translational model of Cfz-induced cardiomyopathy, based on clinically applicable dose regimens and we have concluded that two and four dose protocols successfully resemble the clinical observations in vivo. Herein, sixty C57Bl/6 male mice (12–14 weeks old) were randomized to: 1. Two doses Protocol: i. Control (N/S 0.9%), ii. Cfz (8mg/kg) for two consecutive days; and 2. Four doses Protocol: i. Control (N/S 0.9%), ii. Cfz (8mg/kg) for seven days intraperitoneally. Systolic (SBP) and diastolic blood pressure (DBP) were measured by tail cuffs; the latter protocol was repeated and urine collection was performed via metabolic cages studies. Renal samples were collected for histological, proteomic, metabolomic and molecular signaling analyses. Finally, eplerenone, a mineralocorticoid receptor (MR) blocker, was orally co-administered with Cfz to the mice daily (165 mg/kg) in the four doses protocol. Results Cfz increased SBP only in the four doses protocol (78.50±2.05 vs 68.20±0.73 in the Control group, **P Conclusions Activation of MR signaling by Cfz in the kidneys orchestrates renal water/salt retention and drives an increase in blood pressure in vivo. Histological and metabolomic analyses present that Cfz induces an acute kidney injury and a tonicity increase. Eplerenone reversed Cfz-induced blood pressure increase and restored diuresis by inhibiting MR/SGK-1 signaling. Therefore, MR blockade emerges as a potent therapeutic approach against Cfz-related cardiovascular adverse events. Funding Acknowledgement Type of funding sources: None.
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- 2021
42. Thermally activated persulfate oxidation of ampicillin: Kinetics, transformation products and ecotoxicity
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Kosmas Lalas, Olga S. Arvaniti, Eirini Zkeri, Maria-Christina Nika, Nikolaos S. Thomaidis, Dionissios Mantzavinos, Athanasios S. Stasinakis, and Zacharias Frontistis
- Subjects
Kinetics ,Environmental Engineering ,Sulfates ,Water ,Environmental Chemistry ,Ampicillin ,Chlorella ,Oxidation-Reduction ,Pollution ,Waste Management and Disposal ,Adenosine Monophosphate ,Water Pollutants, Chemical - Abstract
The heat-activated persulfate system showed encouraging results for the destruction of the widely used antibiotic Ampicillin (AMP). AMP removal follows exponential decay, and the observed kinetic constant was enhanced with persulfate (PS) dosage at the range 50-500 mg L
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- 2022
43. Evaluation of the performance of a pilot-scale solar still for olive mill wastewater treatment
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Petros Mastoras, Stergios Vakalis, Michail S. Fountoulakis, Georgia Gatidou, Panagiota Katsianou, Georgios Koulis, Nikolaos S. Thomaidis, Dias Haralambopoulos, and Athanasios S. Stasinakis
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Renewable Energy, Sustainability and the Environment ,Strategy and Management ,Building and Construction ,Industrial and Manufacturing Engineering ,General Environmental Science - Published
- 2022
44. Development and Application of Liquid Chromatographic Retention Time Indices in HRMS-Based Suspect and Nontarget Screening
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Adrian Covaci, Tobias Schulze, Martin Krauss, Juliane Hollender, Andrew D. McEachran, Nikiforos Alygizakis, Emma L. Schymanski, Alex Chao, Pablo Gago-Ferrero, Nikolaos S. Thomaidis, Christoph Moschet, Reza Aalizadeh, Antony Williams, Jaroslav Slobodnik, María Ibáñez, and Thomas M. Young
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Reproducibility ,Chromatography ,Chemistry ,Elution ,molecular modeling ,Calibration set ,Reproducibility of Results ,Liquid Chromatographic ,Chemical similarity ,HRMS ,calibration ,cations ,Mass Spectrometry ,Analytical Chemistry ,Calibration ,liquid chromatography ,chromatography ,Engineering sciences. Technology ,Retention time ,Chromatography, Liquid - Abstract
There is an increasing need for comparable and harmonized retention times (tR) in liquid chromatography (LC) among different laboratories, to provide supplementary evidence for the identity of compounds in high-resolution mass spectrometry (HRMS)-based suspect and nontarget screening investigations. In this study, a rigorously tested, flexible, and less system-dependent unified retention time index (RTI) approach for LC is presented, based on the calibration of the elution pattern. Two sets of 18 calibrants were selected for each of ESI+ and ESI-based on the maximum overlap with the retention times and chemical similarity indices from a total set of 2123 compounds. The resulting calibration set, with RTI set to range between 1 and 1000, was proposed as the most appropriate RTI system after rigorous evaluation, coordinated by the NORMAN network. The validation of the proposed RTI system was done externally on different instrumentation and LC conditions. The RTI can also be used to check the reproducibility and quality of LC conditions. Two quantitative structure-retention relationship (QSRR)-based models were built based on the developed RTI systems, which assist in the removal of false-positive annotations. The applicability domains of the QSRR models allowed completing the identification process with higher confidence for substances within the domain, while indicating those substances for which results should be treated with caution. The proposed RTI system was used to improve confidence in suspect and nontarget screening and increase the comparability between laboratories as demonstrated for two examples. All RTI-related calculations can be performed online at http://rti.chem.uoa.gr/., The authors acknowledge the contributions of Birgit Beck (Eawag) during this work. They also acknowledge the partial financial support from the NORMAN Association. R.A. acknowledges the scholarship and financial support from the Hellenic Foundation for Research and Innovation (HFRI) and the General Secretariat for Research and Technology (GSRT), under the HFRI Ph.D. Fellowship grant (GA. no. 14484). E.L.S. was supported by the Luxembourg National Research Fund (FNR, Grant A18/BM/12341006).
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- 2021
45. SARS-CoV-2 wastewater surveillance data can predict hospitalizations and ICU admissions
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Aikaterini Galani, Apostolos Karagiannidis, Panagiotis G. Adamopoulos, Nikiforos Alygizakis, Theodore Lytras, Nikolaos S. Thomaidis, Athina Markou, Evi Lianidou, Aikaterini Kontou, Meletios-Athanasios Dimopoulos, Jordan Peccia, Dimitrios Paraskevis, Vasilis Vasiliou, Sotirios Tsiodras, Reza Aalizadeh, Marios Kostakis, Margaritis Avgeris, David C. Thompson, and Andreas Scorilas
- Subjects
medicine.medical_specialty ,Wastewater-Based Epidemiological Monitoring ,Environmental Engineering ,Surveillance data ,Coronavirus disease 2019 (COVID-19) ,Method validation ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Wastewater-based epidemiology ,Wastewater ,Article ,law.invention ,law ,Pandemic ,medicine ,Environmental Chemistry ,Humans ,Waste Management and Disposal ,business.industry ,SARS-CoV-2 ,RT-qPCR ,COVID-19 ,Pollution ,Health indicator ,Intensive care unit ,Hospitalization ,Intensive Care Units ,Hospital admission rates ,ICU admission rates ,Emergency medicine ,RNA, Viral ,Infection dynamics ,business - Abstract
We measured SARS-CoV-2 RNA load in raw wastewater in Attica, Greece, by RT-qPCR for the environmental surveillance of COVID-19 for 6 months. The lag between RNA load and pandemic indicators (COVID-19 hospital and intensive care unit (ICU) admissions) was calculated using a grid search. Our results showed that RNA load in raw wastewater is a leading indicator of positive COVID-19 cases, new hospitalization and admission into ICUs by 5, 8 and 9 days, respectively. Modelling techniques based on distributed/fixed lag modelling, linear regression and artificial neural networks were utilized to build relationships between SARS-CoV-2 RNA load in wastewater and pandemic health indicators. SARS-CoV-2 mutation analysis in wastewater during the third pandemic wave revealed that the alpha-variant was dominant. Our results demonstrate that clinical and environmental surveillance data can be combined to create robust models to study the on-going COVID-19 infection dynamics and provide an early warning for increased hospital admissions., Graphical abstract Unlabelled Image
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- 2021
46. Characterization of the Phenolic Fingerprint of
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Natasa P, Kalogiouri, Evangelia, Kritikou, Ioannis C, Martakos, Constantina, Lazarou, Michalis, Pentogennis, and Nikolaos S, Thomaidis
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Kolovi ,Phenols ,Tandem Mass Spectrometry ,secoiridoids ,phenolic content ,Iridoids ,QTOF-MS ,olive oil ,Olive Oil ,health claim ,Chromatography, High Pressure Liquid ,Article - Abstract
Extra virgin olive oil (EVOO) is recognized for its nutritional virtues and the beneficial health effects deriving from its hydrophilic fraction (phenolic acids, phenolic alcohols, flavonoids, and secoiridoids). The phenolic compounds of EVOOs possess multiple biological properties such as antioxidant, antimicrobial, anticarcinogenic, and anti-inflammatory properties, among others. Considering that EVOOs produced in Greece are recognized as high-quality products due to their rich phenolic content, it is imperative to characterize Greek monovarietal EVOOs and ensure that their uniqueness is closely linked to their botanical and territorial origin. In this work, an ultra-high-performance liquid chromatography–quadrupole time-of-flight tandem mass spectrometry (UHPLC-QTOF-MS) analytical method combined with target and suspect screening was used to characterize monovarietal EVOOs of the Kolovi variety from Lesvos, and thereby establish their phenolic fingerprint. Overall, 25 phenols were determined, and the total quantification and semi-quantification results ranged between 251 and 1230 mg/kg, highlighting the high phenolic content of the Kolovi variety from the island of Lesvos in the North Aegean.
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- 2021
47. Authentication of Olive Products with Liquid Chromatographic Techniques
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Ioannis Martakos, Sofia K. Drakopoulou, Marilena E. Dasenaki, Panagiota A. Katsianou, and Nikolaos S. Thomaidis
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Chromatography ,Computer science ,Authentication (law) - Published
- 2021
48. Screening of legacy and emerging substances in surface water, sediment, biota and groundwater samples collected in the Siverskyi Donets River Basin employing wide-scope target and suspect screening
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Nikiforos A. Alygizakis, Anastasia Koupa, Marios Kostakis, Peter Oswald, Varvara Nikolopoulou, Maria-Christina Nika, Martina Oswaldova, Jaroslav Slobodnik, and Nikolaos S. Thomaidis
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Pollution ,Geologic Sediments ,Environmental Engineering ,media_common.quotation_subject ,Drainage basin ,Rivers ,Environmental Chemistry ,Ecotoxicology ,Waste Management and Disposal ,Groundwater ,Ecosystem ,media_common ,Pollutant ,geography ,geography.geographical_feature_category ,Water ,Biota ,Water Framework Directive ,Environmental chemistry ,Environmental science ,Surface water ,Water Pollutants, Chemical ,Environmental Monitoring - Abstract
Siverskyi Donets is the fourth longest river in Ukraine and its ecosystem is heavily affected by numerous agricultural and industrial activities. An impact of the on-going armed military conflicts in the Eastern Ukraine to the overall pollution by the chemicals has been studied. Considering the uncontrolled activities in the catchment due to the conflict, there is a high demand to assess the contamination status of the Siverskyi Donets basin. In this study, the occurrence of the EU Water Framework Directive priority substances, selected physicochemical parameters and wide-range emerging contaminants were investigated in surface water, groundwater, biota and river sediments samples from 13 sampling sites in the river basin. The study included metals, inorganic, non-polar and polar organic contaminants. The wide-scope target screening of 2316 substances and suspect screening of 2219 substances revealed occurrence of 83 compounds in the studied samples. A few industrial chemicals such as plasticizers bisphenol A and DEHP, as well as flame retardant brominated diphenylethers were found to be potentially hazardous to the ecosystem, exceeding the established legacy environmental quality standards (EQS) or the provisional no-effect concentration (PNEC) values. River sediment samples contained traces of long-term banned chemicals such as polychlorinated biphenyls (PCBs) and degradation products of DDT (p,p'-DDD and p,p'-DDE). A simplified risk assessment based on comparison of measured concentration of the detected compounds against their (eco)toxicity threshold values from the NORMAN Ecotoxicology Database has been performed to aid their prioritization in future monitoring and, eventually, establishing the list of Siverskyi Donets River Basin Specific Pollutants. A comparison with the recent similar studies in the Dniester and Dnieper river basins in Ukraine has shown that the overall pollution by chemicals in the Siverskyi Donets basin is significantly lower.
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- 2021
49. MALDI-TOF-MS integrated workflow for food authenticity investigations: An untargeted protein-based approach for rapid detection of PDO feta cheese adulteration
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Ioanna V. Barla, Dimitrios Damalas, Anastasia S. Kritikou, Reza Aalizadeh, Nikolaos S. Thomaidis, and Carsten Baessmann
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Sheep ,Chemistry ,food and beverages ,Food Contamination ,General Medicine ,Mass spectrometry ,Animal origin ,Rapid detection ,Feta cheese ,Analytical Chemistry ,Workflow ,Chemometrics ,Cow milk ,Matrix-assisted laser desorption/ionization ,food ,Milk ,Cheese ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Animals ,Cattle ,Female ,Food science ,food.cheese ,Routine analysis ,Food Science - Abstract
Advances in Matrix-assisted Laser Desorption/Ionization -Time-Of-Flight Mass Spectrometry (MALDI-TOF-MS) have led to its supremacy for complex assessment of food authenticity studies, like dairy products fraud, holding promise for the discovery of potential authenticity (bio)markers. In this study, an integrated untargeted protein-based workflow in combination with advanced chemometrics is presented, to address authenticity challenges in PDO feta cheese which is legally manufactured by the mixture of sheep/goat milk. Potential markers attributed to specific animal origin were found from protein profiles acquired for authentic feta and white cheeses (prepared from cow milk), belonging to 4 kDa–18.5 kDa mass area. Rapid detection of feta cheese adulteration from cow milk was also achieved down to 1% adulteration level. The discriminative models showed high predictive ability for feta cheese authenticity (Q2 = 0.920, RMSEE = 0.053) and its adulteration (Q2 = 0.835, RMSEE = 0.121), introducing a reliable approach in routine analysis. The methodology was successfully applied in detection of cow milk in sheep yoghurt.
- Published
- 2021
50. Corrigendum
- Author
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Despo Fatta-Kassinos, Evroula Hapeshi, Jean-Daniel Berset, Asher Brenner, Leon Barron, Ivona Krizman-Matasic, Fabio Polesel, Adrian Covaci, María Jesús Andrés-Costa, Ester López-García, Jose Antonio Baz-Lomba, Benjamin J. Tscharke, Damien A. Devault, Miren López de Alda, Félix Hernández, Ettore Zuccato, Rosario Rodil, Barbara Kasprzyk-Hordern, Emma Gracia-Lor, Igor Bodík, Gillian L. McEneff, Reinhard Oertel, Anne Bannwarth, Robin Udrisard, Roman Grabic, Konstantinos Fytianos, Iria González-Mariño, Erika Castrignanò, Foon Yin Lai, Yolanda Picó, Malcolm J. Reid, Arndis S. C. Love, Erik Emke, Wojciech Lechowicz, Björn Helm, Nikolaos S. Thomaidis, Susana M. Simoes, Kelly Munro, Benedek G. Plósz, Alexander L.N. van Nuijs, Nikiforos A. Alygizakis, Olivier Delemont, Kristin Olafsdottir, Christophoros Christophoridis, Lubertus Bijlsma, Alvaro Lopes, Ester Heath, Sara Karolak, Sara Schubert, Mário Dias, Daniel A. Burgard, Frederic Been, Alberto Celma, Kevin V. Thomas, Jake W. O'Brien, Sara Castiglioni, Jack Rice, Christoph Ort, Teemu Gunnar, Nicola Mastroianni, Cristina Postigo, Pim de Voogt, Herbert Oberacher, Thomas Nefau, Cobus Gerber, Ganna Fedorova, Lisa Benaglia, Maja M. Sremacki, Richard Bade, Viviane Yargeau, Stefan Gruener, Noelia Salgueiro-Gonzalez, Ivan Senta, Aino Kankaanpää, Katarzyna Styszko, José Benito Quintana, Rosa Montes, Andreas Libonati Brock, Pierre Esseiva, Pedram Ramin, and Senka Terzić
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Internationality ,Scale (ratio) ,Illicit Drugs ,N-Methyl-3,4-methylenedioxyamphetamine ,Medicine (miscellaneous) ,Wastewater ,Methamphetamine ,Substance Abuse Detection ,Amphetamine ,Psychiatry and Mental health ,Spatio-Temporal Analysis ,Cocaine ,Tandem Mass Spectrometry ,Humans ,Environmental science ,Illicit drug ,Corrigendum ,Water resource management ,Chromatography, Liquid ,Environmental Monitoring - Abstract
Wastewater-based epidemiology is an additional indicator of drug use that is gaining reliability to complement the current established panel of indicators. The aims of this study were to: (i) assess spatial and temporal trends of population-normalized mass loads of benzoylecgonine, amphetamine, methamphetamine and 3,4-methylenedioxymethamphetamine (MDMA) in raw wastewater over 7 years (2011-17); (ii) address overall drug use by estimating the average number of combined doses consumed per day in each city; and (iii) compare these with existing prevalence and seizure data.Analysis of daily raw wastewater composite samples collected over 1 week per year from 2011 to 2017.Catchment areas of 143 wastewater treatment plants in 120 cities in 37 countries.Parent substances (amphetamine, methamphetamine and MDMA) and the metabolites of cocaine (benzoylecgonine) and of ΔBenzoylecgonine was the stimulant metabolite detected at higher loads in southern and western Europe, and amphetamine, MDMA and methamphetamine in East and North-Central Europe. In other continents, methamphetamine showed the highest levels in the United States and Australia and benzoylecgonine in South America. During the reporting period, benzoylecgonine loads increased in general across Europe, amphetamine and methamphetamine levels fluctuated and MDMA underwent an intermittent upsurge.The analysis of wastewater to quantify drug loads provides near real-time drug use estimates that globally correspond to prevalence and seizure data.
- Published
- 2020
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