12 results on '"Amy Trinh Pham"'
Search Results
2. Therapeutic opportunities in cancer therapy: targeting the p53-MDM2/MDMX interactions
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Murali, Munisamy, Nayonika, Mukherjee, Levin, Thomas, Amy Trinh, Pham, Arash, Shakeri, Yusheng, Zhao, Jill, Kolesar, Praveen P N, Rao, Vivek M, Rangnekar, and Mahadev, Rao
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Review Article - Abstract
Ubiquitination is a key enzymatic post-translational modification that influences p53 stability and function. p53 protein regulates the expression of MDM2 (mouse double-minute 2 protein) E3 ligase and MDMX (double-minute 4 protein), through proteasome-based degradation. Exploration of targeting the ubiquitination pathway offers a potentially promising strategy for precision therapy in a variety of cancers. The p53-MDM2-MDMX pathway provides multiple molecular targets for small molecule screening as potential therapies for wild-type p53. As a result of its effect on molecular carcinogenesis, a personalized therapeutic approach based on the wild-type and mutant p53 protein is desirable. We highlighted the implications of p53 mutations in cancer, p53 ubiquitination mechanistic details, targeting p53-MDM2/MDMX interactions, significant discoveries related to MDM2 inhibitor drug development, MDM2 and MDMX dual target inhibitors, and clinical trials with p53-MDM2/MDMX-targeted drugs. We also investigated potential therapeutic repurposing of selective estrogen receptor modulators (SERMs) in targeting p53-MDM2/MDMX interactions. Molecular docking studies of SERMs were performed utilizing the solved structures of the p53/MDM2/MDMX proteins. These studies identified ormeloxifene as a potential dual inhibitor of p53/MDM2/MDMX interaction, suggesting that repurposing SERMs for dual targeting of p53/MDM2 and p53/MDMX interactions is an attractive strategy for targeting wild-type p53 tumors and warrants further preclinical research.
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- 2021
3. Magneto-structural studies of two M–O–M bridged homochiral mixed valence Co(II)/Co(III) complexes
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Gabriele Delle Monache, Melanie Pilkington, Jeremy M. Rawson, Parisa Abbasi, Amy Trinh Pham, Eleni C. Mazarakioti, and Theocharis C. Stamatatos
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Circular dichroism ,Valence (chemistry) ,010405 organic chemistry ,Chemistry ,Intermolecular force ,Space group ,010402 general chemistry ,01 natural sciences ,Magnetic susceptibility ,0104 chemical sciences ,Inorganic Chemistry ,Crystallography ,Molecular geometry ,Octahedron ,Materials Chemistry ,Physical and Theoretical Chemistry ,Chirality (chemistry) - Abstract
Two mixed-valence cobalt complexes, [CoIICoIII2(mpm)6](ClO4)2 (1) and [CoII2CoIII2(μ3-OMe)2(μ-mpm)4(NO3)4] (2), where mpm is the deprotonated form of R or S α-methyl-2-pyridinemethanol, have been structurally and magnetically characterized. Both complexes crystallize in chiral space groups, where 1 is a trinuclear compound with a linear Co(III)–Co(II)–Co(III) topology and 2 is a tetranuclear cluster with a defect dicubane-type structure that has two missing vertices. In both cases the mpm− ligand bridges adjacent Co ions in a η1:η2:μ manner. The molecular geometries of the complexes reveal the Co ions are octahedral, where the greatest deviation from Oh symmetry is apparent for the HS d7 Co(II) ions. The chirality of 1 and 2 were studied by circular dichroism spectroscopy where opposite Cotton effects are observed for the R- and S-enantiomers of both complexes. Magnetic susceptibility studies reveal the presence of largely quenched first order orbital angular momentum together with weak ion or intermolecular dipole exchange.
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- 2019
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4. Drug repurposing for Alzheimer’s disease: Selective serotonin reuptake inhibitors
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Tarek Mohamed, Arash Shakeri, Gary Tin, Amy Trinh Pham, and Praveen P.N. Rao
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Epidemiology ,business.industry ,Health Policy ,Disease ,Pharmacology ,Serotonin reuptake ,Psychiatry and Mental health ,Cellular and Molecular Neuroscience ,Drug repositioning ,Developmental Neuroscience ,Medicine ,Neurology (clinical) ,Geriatrics and Gerontology ,business - Published
- 2020
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5. Disease-modifying therapy for Alzheimer’s
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Praveen P.N. Rao and Amy Trinh Pham
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Oncology ,medicine.medical_specialty ,business.industry ,Internal medicine ,Medicine ,Disease ,business - Published
- 2020
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6. Interactions of Selective Serotonin Reuptake Inhibitors with β-Amyloid
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Gary Tin, Amy Trinh Pham, Praveen P.N. Rao, Tarek Mohamed, and Arash Shakeri
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Physiology ,Cognitive Neuroscience ,Fluvoxamine ,Pharmacology ,Biochemistry ,Protein Aggregates ,03 medical and health sciences ,0302 clinical medicine ,Alzheimer Disease ,medicine ,Humans ,Escitalopram ,030304 developmental biology ,Depressive Disorder ,0303 health sciences ,Fluoxetine ,Sertraline ,Amyloid beta-Peptides ,Chemistry ,Fibrillogenesis ,Cell Biology ,General Medicine ,Paroxetine ,Peptide Fragments ,3. Good health ,Molecular Docking Simulation ,Drug repositioning ,Pharmacophore ,Selective Serotonin Reuptake Inhibitors ,030217 neurology & neurosurgery ,Protein Binding ,medicine.drug - Abstract
Treating Alzheimer's disease (AD) is a major challenge at the moment with no new drugs available to cure this devastating neurodegenerative disorder. In this regard, drug repurposing, which aims to determine novel therapeutic usage for drugs already approved by the regulatory agencies, is a pragmatic approach to discover novel treatment strategies. Selective serotonin reuptake inhibitors (SSRIs) are a known class of United States Food and Drug Administration approved drugs used in the treatment of depression. We investigated the ability of SSRIs fluvoxamine, fluoxetine, paroxetine, sertraline, and escitalopram on Aβ42 aggregation and fibrillogenesis. Remarkably, the aggregation kinetic experiments carried out demonstrate the anti-Aβ42 aggregation activity of SSRIs fluoxetine, paroxetine, and sertraline at all the tested concentrations (1, 10, 50, and 100 μM). Both fluoxetine and paroxetine were identified as the most promising SSRIs, showing 74.8 and 76% inhibition of Aβ42 aggregation at 100 μM. The transmission electron microscopy experiments and dot-blot study also demonstrate the ability of fluoxetine and paroxetine to prevent Aβ42 aggregation and fibrillogenesis, providing further evidence. Investigating the binding interactions of fluoxetine and paroxetine in the Aβ42 oligomer and fibril models derived from the solid-state NMR structure suggests that these SSRIs interact at a region close to the N-terminal (Lys16-Glu22) in the S-shaped cross-β-strand assembly and reduce Aβ42 fibrillogenesis. On the basis of this study, a pharmacophore model is proposed which shows that the minimum structural requirements to design novel Aβ42 aggregation inhibitors include the presence of one ionizable group, one hydrophobic group, two aromatic rings, and two hydrogen bond donor groups. These studies demonstrate that SSRIs have the potential to prevent Aβ42 aggregation by direct binding and could be beneficial to AD patients on SSRIs.
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- 2018
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7. Contributors
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Michelle R. Arkin, Andrea Basso, Pietro Capurro, Stuart J. Conway, Margarida Espadinha, M. Isabel García-Moreno, José M. García Fernández, Kamal Kumar, Elena Lenci, Qingliang Li, José L. Medina-Franco, Carmen Ortiz Mellet, Amy Trinh Pham, Praveen P.N. Rao, Fernanda I. Saldívar-González, Elena M. Sánchez-Fernández, Maria M.M. Santos, Arash Shakeri, Andrea Trabocchi, and Chris G.M. Wilson
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- 2020
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8. Discovery of small molecules for the treatment of Alzheimer’s disease
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Praveen P.N. Rao, Amy Trinh Pham, and Arash Shakeri
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Drug discovery ,Chemistry ,Computational biology ,Disease ,Small molecule - Abstract
This chapter provides a summary on the recent progress in discovering small molecule therapies aimed at Alzheimer’s disease (AD). In particular, the focus is on hybrid small molecules that exhibit multifunctional properties. A summary on the design, synthetic methods utilized, in vitro and in vivo assays used, and activity data of small molecules based on diverse core templates such as quinones, selenazolones, stilbenes, hydroxyanthraquinones, indoles, coumarins, phenothiazines, phenoselenazines, pyrimidinylthioureas, quinazolines, pyrido[3,2-d]pyrimidines, thiazoles, pyridothiazoles, benzyloxyphenylpiperazines, and quinolone-indoles is described. Due to a string of recent clinical trial failures in search of anti-AD drugs, the tide is slowly shifting toward developing multifunctional small molecules as anti-AD agents. From a regulatory perspective, developing multitarget-directed ligands for treating AD would significantly increase the cost and duration in drug discovery and market launch. However, the progress to date on this front holds tremendous promise and hope to find a cure for AD.
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- 2020
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9. {Ni
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Julia, Mayans, Angeliki A, Athanasopoulou, Amy Trinh, Pham, Mercè, Font-Bardia, Eleni C, Mazarakioti, Melanie, Pilkington, Theocharis C, Stamatatos, and Albert, Escuer
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Homometallic {NiII4} cubane-like clusters with a rare chiral core have been prepared via the employment of enantiomerically pure 2-(1-hydroxyethyl)pyridine (Hmpm). Comparison with the achiral cubanes derived from the related 2-pyridinemethanol (Hpym) ligand reveals drastic structural changes as a consequence of the transfer of chirality from the ligands to the whole structure. Their magnetic properties have been related to the structural features of their cubane-type cores.
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- 2019
10. Drug Repurposing: Dipeptidyl Peptidase IV (DPP4) Inhibitors as Potential Agents to Treat SARS-CoV-2 (2019-nCoV) Infection
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Praveen P.N. Rao, Amna El Shatshat, Yusheng Zhao, Amy Trinh Pham, Ahmed Hefny, Arash Shakeri, and Rahul C Karuturi
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0301 basic medicine ,serine proteases ,Proteases ,MERS-CoV CLpro ,viruses ,lcsh:Medicine ,lcsh:RS1-441 ,Pharmaceutical Science ,030209 endocrinology & metabolism ,type-2 diabetes ,Linagliptin ,medicine.disease_cause ,Bioinformatics ,Article ,cysteine proteases ,Dipeptidyl peptidase ,lcsh:Pharmacy and materia medica ,03 medical and health sciences ,0302 clinical medicine ,Drug Discovery ,Evogliptin ,medicine ,SARS-CoV-2 Mpro protomer ,SARS-CoV-2 Mpro dimer ,Dipeptidyl peptidase-4 ,Coronavirus ,drug repurposing ,business.industry ,SARS-CoV-2 infection ,lcsh:R ,fungi ,molecular docking ,Gemigliptin ,3. Good health ,Drug repositioning ,030104 developmental biology ,dipeptidyl peptidase IV inhibitors ,Molecular Medicine ,business ,medicine.drug - Abstract
The current outbreak of severe acute respiratory distress syndrome (SARS) or nCOVID-19 pandemic, caused by the coronavirus-2 (CoV-2), continues to wreak havoc globally. As novel vaccines are being discovered and developed, small molecule drugs still constitute a viable treatment option for SARS-CoV-2 infections due to their advantages such as superior patient compliance for oral therapies, reduced manufacturing costs and ease of large scale distribution due to better stability and storage profiles. Discovering new drugs for SARS-CoV-2 infections is a time consuming and expensive proposition. In this regard, drug repurposing is an appealing approach which can provide rapid access to therapeutics with proven record of safety and efficacy. We investigated the drug repurposing potential of a library of dipeptidyl peptidase 4 (DPP4) inhibitors which are currently marketed for type-2 diabetes as treatment option for SARS-CoV-2 infections. These computational studies led to the identification of three marketed DPP4 inhibitors, gemigliptin, linagliptin and evogliptin as potential inhibitors of SARS-CoV-2 Mpro viral cysteine protease. In addition, our computational modeling shows that these drugs have the potential to inhibit other viral cysteine proteases from the beta coronavirus family, including the SAR-CoV Mpro and MERS-CoV CLpro suggesting their potential to be repurposed as broad-spectrum antiviral agents.
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- 2021
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11. The effects of heat and freeze-thaw cycling on naloxone stability
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Praveen P.N. Rao, Michael A. Beazely, Amy Trinh Pham, and Dulcie Lai
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Experimental control ,Hot Temperature ,Narcotic Antagonists ,030508 substance abuse ,Medicine (miscellaneous) ,Naloxone Hydrochloride ,Ampoule ,03 medical and health sciences ,Drug Stability ,Naloxone ,Freezing ,medicine ,Chromatography, High Pressure Liquid ,Drug Packaging ,Harm reduction ,Chromatography ,Chemistry ,lcsh:Public aspects of medicine ,Brief Report ,Naloxone stability ,Temperature ,Public Health, Environmental and Occupational Health ,Opioid overdose ,lcsh:RA1-1270 ,medicine.disease ,Psychiatry and Mental health ,Drug concentration ,Calibration ,0305 other medical science ,medicine.drug ,Freeze thaw cycling - Abstract
Purpose The availability of take home naloxone (THN) was increased for Canadians in 2016, including access to kits via pharmacies. Unlike typical over-the-counter (OTC) and prescription drugs, THN kits may be stored in non-standard conditions, including in vehicles, backpacks, and out of doors. To evaluate whether these non-standard storage conditions affect stability, we investigated the impact of heat and freeze-thaw cycling on naloxone hydrochloride stability. Methods To assess the effect of heat, naloxone hydrochloride ampoules were exposed to 80 °C in a temperature-controlled oven for 8 h followed by 16 h at room temperature. To assess the effect of freeze-thaw cycles, naloxone hydrochloride ampoules were exposed to − 20 °C for 16 h followed by 8 h at 4 °C. The impact of these conditions on naloxone hydrochloride stability was evaluated each day for 1 week and after 2 and 4 weeks. The concentration of remaining naloxone hydrochloride was quantified using high-performance liquid chromatography (HPLC). Naloxone hydrochloride ampoules stored at room temperature served as the experimental control. Results Naloxone hydrochloride ampoules exhibit no changes in drug concentration following exposure to heat or freeze-thaw cycles for up to 28 days compared to ampoules maintained at room temperature (as indicated in the product monograph). Conclusions Naloxone hydrochloride remains chemically stable following exposure to heat or freeze-thaw cycles after 28 days. If THN kits are stored in non-standard conditions (for up to 28 days) the active naloxone is likely to remain stable. Despite this, pharmacists should continue to emphasize the importance of appropriate storage of THN kits to ensure optimal efficacy should naloxone administration be required in an emergency situation. Electronic supplementary material The online version of this article (10.1186/s12954-019-0288-4) contains supplementary material, which is available to authorized users.
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- 2019
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12. Interactions of polyunsaturated fatty acids with amyloid peptides Aβ40 and Aβ42
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Amy Trinh Pham, Praveen P.N. Rao, and Amna El Shatshat
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0301 basic medicine ,Eicosatetraenoic acid ,Linoleic acid ,Biophysics ,Peptide ,Biochemistry ,03 medical and health sciences ,chemistry.chemical_compound ,Microscopy, Electron, Transmission ,Humans ,Molecular Biology ,chemistry.chemical_classification ,Amyloid beta-Peptides ,030102 biochemistry & molecular biology ,Fibrillogenesis ,Peptide Fragments ,Molecular Docking Simulation ,Oleic acid ,Kinetics ,030104 developmental biology ,Spectrometry, Fluorescence ,chemistry ,Docosahexaenoic acid ,Fatty Acids, Unsaturated ,lipids (amino acids, peptides, and proteins) ,Arachidonic acid ,Dimerization ,Polyunsaturated fatty acid ,Protein Binding - Abstract
Polyunsaturated fatty acids (PUFAs) are reported to exert beneficial effects in Alzheimer's disease. Some PUFAs are known to reduce amyloid-beta (Aβ) toxicity by promoting its degradation and clearance. Studies on the direct interactions of PUFAs with Aβ peptides are limited and contradictory. In this study, we report the interactions of fatty acids docosahexaenoic acid (DHA), eicosatetraenoic acid (EPA), α-linolenic acid (ALA), arachidonic acid (ARA), linoleic acid (LNA) and oleic acid (OA) with Aβ peptides by carrying out fluorescence based aggregation kinetic experiments, transmission electron microscopy and molecular docking studies. Our investigations demonstrate that all the fatty acids tested exhibit anti-aggregation properties by preventing both Aβ40 and Aβ42 fibrillogenesis (∼16–84% inhibition). OA and DHA were identified as excellent inhibitors of Aβ40 or Aβ42 fibrillogenesis respectively (∼84% and 81% inhibition at 25 μM). Molecular docking studies conducted, using the dimer and oligomer models of Aβ40 peptide, suggest that these fatty acids interact in the aggregation prone Phe19–Ala21 and the β-turn region (Asp23–Lys28) whereas a similar study with Aβ42 dimer and oligomer models, indicate that the fatty acids were oriented in a hydrophobic region (Gln15, Leu16, Leu17 and Leu34). These results, suggest that DHA, EPA, ALA, ARA, LNA and OA are capable of directly interacting with both Aβ40 and Aβ42 peptides. These studies will have implications in developing potential therapeutics for Alzheimer's disease.
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- 2018
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