230 results on '"SLAMA, Petr"'
Search Results
2. Author Correction: Production, optimization, scale up and characterization of polyhydoxyalkanoates copolymers utilizing dairy processing waste
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Patil, Tejaswini Dhanaji, Ghosh, Saptaneel, Agarwal, Aparna, Patel, Sanjay Kumar Singh, Tripathi, Abhishek Dutt, Mahato, Dipendra Kumar, Kumar, Pradeep, Slama, Petr, Pavlik, Ales, and Haque, Shafiul
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- 2024
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3. ‘Intracytoplasmic sperm injection (ICSI) paradox’ and ‘andrological ignorance’: AI in the era of fourth industrial revolution to navigate the blind spots
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Sengupta, Pallav, Dutta, Sulagna, Jegasothy, Ravindran, Slama, Petr, Cho, Chak-Lam, and Roychoudhury, Shubhadeep
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- 2024
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4. Integrated approach for detection of SARS-CoV-2 and its variant by utilizing LAMP and ARMS-PCR
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Nawab, Maryam, Riaz, Syeda Kiran, Ismail, Eiman, Ahamed, Alfar, Tariq, Aaysha, Malik, Muhammad Faraz Arshad, Qusty, Naeem F., Bantun, Farkad, Slama, Petr, Umair, Massab, Haque, Shafiul, Bonilla-Aldana, D. Katterine, and Rodriguez-Morales, Alfonso J.
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- 2024
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5. Production, optimization, scale up and characterization of polyhydoxyalkanoates copolymers utilizing dairy processing waste
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Patil, Tejaswini Dhanaji, Ghosh, Saptaneel, Agarwal, Aparna, Patel, Sanjay Kumar Singh, Tripathi, Abhishek Dutt, Mahato, Dipendra Kumar, Kumar, Pradeep, Slama, Petr, Pavlik, Ales, and Haque, Shafiul
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- 2024
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6. Garcinol in gastrointestinal cancer prevention: recent advances and future prospects
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Patwa, Nitika, Chauhan, Ritu, Chauhan, Abhishek, Kumar, Manoj, Ramniwas, Seema, Mathkor, Darin Mansor, Saini, Adesh Kumar, Tuli, Hardeep Singh, Haque, Shafiul, and Slama, Petr
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- 2024
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7. Use of nanotechnology-based nanomaterial as a substitute for antibiotics in monogastric animals
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Qadeer, Abdul, Khan, Aamir, Khan, Noor Muhammad, Wajid, Abdul, Ullah, Kaleem, Skalickova, Sylvie, Chilala, Pompido, Slama, Petr, Horky, Pavel, Alqahtani, Mohammed S., and Alreshidi, Maha Awjan
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- 2024
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8. Mechanistic insights into the potential role of dietary polyphenols and their nanoformulation in the management of Alzheimer’s disease
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Albadrani, Hind Muteb, Chauhan, Payal, Ashique, Sumel, Babu, M. Arockia, Iqbal, Danish, Almutary, Abdulmajeed G., Abomughaid, Mosleh Mohammad, Kamal, Mehnaz, Paiva-Santos, Ana Cláudia, Alsaweed, Mohammed, Hamed, Munerah, Sachdeva, Punya, Dewanjee, Saikat, Jha, Saurabh Kumar, Ojha, Shreesh, Slama, Petr, and Jha, Niraj Kumar
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- 2024
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9. Multirole of the internet of medical things (IoMT) in biomedical systems for managing smart healthcare systems: An overview of current and future innovative trends
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Mathkor, Darin Mansor, Mathkor, Noof, Bassfar, Zaid, Bantun, Farkad, Slama, Petr, Ahmad, Faraz, and Haque, Shafiul
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- 2024
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10. Study of genes polymorphisms in RANK/RANKL/OPG and WNT signaling pathways and their associations with bone parameters in broiler chicken
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Steinerova, Michala, Horecky, Cenek, Knoll, Ales, Nedomova, Sarka, Slama, Petr, and Pavlik, Ales
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- 2023
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11. Chitosan-PEI passivated carbon dots for plasmid DNA and miRNA-153 delivery in cancer cells
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Thakur, Saloni, Saini, Reena V., Thakur, Neelam, Sharma, Rohit, Das, Joydeep, Slama, Petr, Tuli, Hardeep Singh, Haque, Shafiul, Niyazi, Hatoon A., Moulay, Mohammed, Harakeh, Steve, and Saini, Adesh K.
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- 2023
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12. Synergistic anti-bacterial effects of green synthesized zinc oxide nanoparticles with levofloxacin
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Thakral, Falak, Singh Tuli, Hardeep, Gupta, Saurabh, Joshi, Hemant, Ashgar, Sami S., Faidah, Hani, Bantun, Farkad, Slama, Petr, and Haque, Shafiul
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- 2023
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13. Mesenchymal stem cells of Oravka chicken breed: promising path to biodiversity conservation
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Svoradová, Andrea, Vašíček, Jaromír, Zmrhal, Vladimír, Venusová, Eva, Pavlík, Aleš, Bauer, Miroslav, Olexiková, Lucia, Langraf, Vladimír, Sláma, Petr, and Chrenek, Peter
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- 2023
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14. Study of selected genes of Wnt signaling pathway in relation to the parameters in the bone tissue of the laying hens
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Steinerova, Michala, Horecky, Cenek, Horecka, Eliska, Knoll, Ales, Nedomova, Sarka, Slama, Petr, and Pavlik, Ales
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- 2022
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15. Molecular mechanism(s) of regulation(s) of c-MET/HGF signaling in head and neck cancer
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Raj, Sibi, Kesari, Kavindra Kumar, Kumar, Arun, Rathi, Brijesh, Sharma, Ashok, Gupta, Piyush Kumar, Jha, Saurabh Kumar, Jha, Niraj Kumar, Slama, Petr, Roychoudhury, Shubhadeep, and Kumar, Dhruv
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- 2022
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16. Reproductomics: Exploring the Applications and Advancements of Computational Tools.
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SENGUPTA, Pallav, DUTTA, Sulagna, Fong Fong LIEW, SAMROT, Antony V., DASGUPTA, Sujoy, RAJPUT, Muhammad Ali, SLAMA, Petr, KOLESAROVA, Adriana, and ROYCHOUDHURY, Shubhadeep
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PROTEOMICS ,GENOMICS ,MACHINE learning ,METABOLOMICS ,MOLECULAR computers - Abstract
Over recent decades, advancements in omics technologies, such as proteomics, genomics, epigenomics, metabolomics, transcriptomics, and microbiomics, have significantly enhanced our understanding of the molecular mechanisms underlying various physiological and pathological processes. Nonetheless, the analysis and interpretation of vast omics data concerning reproductive diseases are complicated by the cyclic regulation of hormones and multiple other factors, which, in conjunction with a genetic makeup of an individual, lead to diverse biological responses. Reproductomics investigates the interplay between a hormonal regulation of an individual, environmental factors, genetic predisposition (DNA composition and epigenome), health effects, and resulting biological outcomes. It is a rapidly emerging field that utilizes computational tools to analyze and interpret reproductive data, with the aim of improving reproductive health outcomes. It is time to explore the applications of reproductomics in understanding the molecular mechanisms underlying infertility, identification of potential biomarkers for diagnosis and treatment, and in improving assisted reproductive technologies (ARTs). Reproductomics tools include machine learning algorithms for predicting fertility outcomes, gene editing technologies for correcting genetic abnormalities, and single cell sequencing techniques for analyzing gene expression patterns at the individual cell level. However, there are several challenges, limitations and ethical issues involved with the use of reproductomics, such as the applications of gene editing technologies and their potential impact on future generations are discussed. The review comprehensively covers the applications and advancements of reproductomics, highlighting its potential to improve reproductive health outcomes and deepen our understanding of reproductive molecular mechanisms. [ABSTRACT FROM AUTHOR]
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- 2024
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17. Clinical Evaluation of AMNIODERM+ ® Wound Dressing Containing Non-Viable Human Amniotic Membrane: Retrospective-Perspective Clinical Trial.
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Schmiedova, Iveta, Slama, Petr, Dembickaja, Alena, Kozova, Beata, Hyneckova, Vendula, Gogolkova, Sona, Stastna, Elen, Zahradnicek, Michal, Savic, Stefan, Davani, Arash, Hulo, Edward, and Martinka, Emil
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DIABETIC foot , *AMNION , *CHRONIC wounds & injuries , *LEG amputation , *WOUND healing , *HEALING - Abstract
Chronic wounds result from the body's inability to heal, causing pain, pathogen entry, limited treatment options, and societal burden. Diabetic foot ulcers are particularly challenging, often leading to severe complications like leg amputation. A clinical study tested AMNIODERM+®, a new device with a lyophilized human amniotic membrane (HAM), on chronic diabetic foot ulcers. Participants had diabetic neuropathic or neuroischemic leg wounds (2–16 cm2) unhealed by 20% after six weeks of standard care. This study showed significant wound healing improvements with AMNIODERM+®. The median wound size reduction after 12 weeks was 95.5%, far exceeding the null hypothesis of 20% change. Additionally, 65% of patients achieved complete ulceration healing, surpassing the 50% efficacy requirement. The median time to full closure was 11.4 weeks, with the proportion of completely healed patients rising progressively, reaching 55% by week 11. These findings, from the clinical trial "Freeze-dried amniotic membrane in the treatment of nonhealing wounds", suggest AMNIODERM+® as a promising future treatment for chronic diabetic foot ulcers. The published results were obtained as part of a clinical trial entitled "Freeze-dried amniotic membrane in the treatment of nonhealing wounds: a single-arm, retrospectively-perspective clinical trial", EUDAMED Nr. CIV-SK-22-10-041146. [ABSTRACT FROM AUTHOR]
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- 2024
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18. Synthetic Extracellular Matrix of Polyvinyl Alcohol Nanofibers for Three-Dimensional Cell Culture.
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Tran, Thi Xuan Thuy, Sun, Gyu-Min, Tran, Hue Vy An, Jeong, Young Hun, Slama, Petr, Chang, Young-Chae, Lee, In-Jeong, and Kwak, Jong-Young
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EXTRACELLULAR matrix ,CELL adhesion ,CELL morphology ,POLYVINYL alcohol ,CELL aggregation ,CELL culture - Abstract
An ideal extracellular matrix (ECM) replacement scaffold in a three-dimensional cell (3D) culture should induce in vivo-like interactions between the ECM and cultured cells. Highly hydrophilic polyvinyl alcohol (PVA) nanofibers disintegrate upon contact with water, resulting in the loss of their fibrous morphology in cell cultures. This can be resolved by using chemical crosslinkers and post-crosslinking. A crosslinked, water-stable, porous, and optically transparent PVA nanofibrous membrane (NM) supports the 3D growth of various cell types. The binding of cells attached to the porous PVA NM is low, resulting in the aggregation of cultured cells in prolonged cultures. PVA NMs containing integrin-binding peptides of fibronectin and laminin were produced to retain the blended peptides as cell-binding substrates. These peptide-blended PVA NMs promote peptide-specific cell adherence and growth. Various cells, including epithelial cells, cultured on these PVA NMs form layers instead of cell aggregates and spheroids, and their growth patterns are similar to those of the cells cultured on an ECM-coated PVA NM. The peptide-retained PVA NMs are non-stimulatory to dendritic cells cultured on the membranes. These peptide-retaining PVA NMs can be used as an ECM replacement matrix by providing in vivo-like interactions between the matrix and cultured cells. [ABSTRACT FROM AUTHOR]
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- 2024
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19. Current knowledge about interactions between avian dendritic cells and poultry pathogens
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Zmrhal, Vladimir and Slama, Petr
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- 2020
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20. Bioactive Aqueous Fraction of Edible Trigonella foenum‐graecum, Piper betel, and Lagenaria siceraria Homogenate Downregulate the Inflammatory Mediators: In‐silico and In‐vitro Appraisal.
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Karmakar, Sankha, Ikbal, Abu Md Ashif, Bhardwaj, Prashant, Tiwari, Onkar Nath, Slama, Petr, Roychoudhury, Shubhadeep, Mandal, Subhash C., Kondi, Vanitha, De, Sirshendu, and Palit, Partha
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LAGENARIA siceraria ,FENUGREEK ,METABOLITES ,DENATURATION of proteins ,MOLECULAR docking ,INFLAMMATORY mediators ,CELL culture - Abstract
Traditional nutraceutical therapy is a promising approach in the management of inflammatory disorders. Fenugreek, bottle gourd, and betel leaf are rich sources of polyphenolic secondary metabolites. They are abundantly found in the Indian subcontinent for the preparation of healthy traditional functional food. Traditional evidence recommended that these herbs could control inflammation. The study was conducted with those herbs to validate their protective role against inflammatory mediators of arthritis and asthma through in‐silico and in‐vitro models. Phytochemical tests revealed the presence of flavonoids, amino acids, polyphenols, and saponins. Molecular docking was performed against six potential inflammatory bio‐marker proteins, like, LOX‐5, 15‐LOX, PLA2, IL‐6, TNFR1 & TNF‐α with the phyto‐marker compounds of test herbs and found satisfactory binding scores against inflammatory bio‐markers. Extended studies with Fenugreek and betel leaf aqueous fractions showcased 87 % and 91 % inhibition of protein denaturation at 200 μg/ml. Bottle‐gourd and betel‐leaf demonstrated 96 % and 98 % inhibition against 15‐Lipoxygenase at 100 μg/ml. TNF‐α and IL‐6 were dropped significantly by 49 % and 36 % upon treatment of betel leaf at 200 μg/ml from the LPS‐stimulated PBMC cultured cells. Findings may recommend the development of commercial anti‐inflammatory polyherbal phytopharmaceuticals for controlling polyarthritis and inflammatory complications subject to preclinical in‐vivo and clinical investigation. [ABSTRACT FROM AUTHOR]
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- 2024
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21. A perspective review on the biosynthesis of plant-based secondary metabolites and their application as potent drugs.
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PRAMANIK, JHILAM, KUMAR, AKASH, RUSTAGI, SARVESH, KATYAL, MEHAK, THAKUR, SHEETAL, BORA, JUTISHNA, MALIK, SUMIRA, TREHAN, ANCHAL, TALUKDAR, NAYAN, and SLAMA, PETR
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PLANT metabolites ,BIOSYNTHESIS ,DRUG development ,MEDICINAL plants ,THERAPEUTICS - Abstract
Many phytochemicals and their derived metabolites produced by plants are extensively employed in commercial goods, pharmaceutical products as well as in the environmental and medical fields. However, these secondary metabolites obtained from plants are in low amounts, and it is difficult to synthesize them at the industrial level. Despite these challenges, they may be utilized for a variety of medicinal products that are either available in the market or are being researched and tested. Secondary metabolites are complex compounds that exhibit chirality. Further, under controlled conditions with elicitors, desired secondary metabolites may be produced from plant cell cultures. This review emphasizes the various aspects of secondary metabolites including their types, synthesis, and applications as medicinal products. The article aims to promote the use of plant secondary metabolites in the management and treatment of various diseases. [ABSTRACT FROM AUTHOR]
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- 2024
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22. ALTERNATIVE SOURCES OF PROTEINS IN FARM ANIMAL FEEDING.
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Khan, Noor Muhammad, Qadeer, Abdul, Khan, Aamir, Nasir, Amar, Sikandar, Arbab, Adil, Muhammad, Horky, Pavel, Nevrkla, Pavel, Slama, Petr, Weisbauerova, Eva, and Kopec, Tomas
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ANIMAL feeding ,FAVA bean ,PROTEINS in animal nutrition ,DOMESTIC animals ,RAPESEED ,HERMETIA illucens ,SINGLE cell proteins - Abstract
The global demand for protein is on the rise owing to the exponential increase in the world population and to meet the global protein requirements, it is imperative to seek alternative sources of proteins in farm animal feeding. Recognizing the importance of proteins and the fact that a major portion of human protein requirements is derived from livestock in the form of meat, milk, and eggs, the available protein-feeding stuff in the form of soybean meal cannot be regarded as sufficient for feeding to livestock. Oil seeds such as rapeseed meal and canola meal have a crude protein content of 30%-40% and are widely used and hence a potential alternative protein source to soybean meal. Going forward, Grain legumes such as peas, faba beans, and lupins, another alternative source of proteins have the potential to replace traditional protein feeds completely or partially such as bone and fish meals. Duckweed with a protein content of 20%-45% is another plant-based potential protein source that can be employed in livestock feeding particularly pigs owing to its huge potential as a growth promoter as evidenced by studies in pigs and piglets. Because of their nutritional qualities and possible environmental advantages, insects represent another class of alternative protein sources that have enormous potential to function as sustainable protein sources. Several insect species have been assessed for use as animal feeds; the most promising ones include the yellow mealworm (Tenebrio molitor, TM), the common house fly (MD), and the black soldier fly (Hermetia illucens, HI). Byproducts from aquaculture and fisheries are abundant in macro- and micronutrients, and their utilisation can provide fishmeal and fish oil, which can then be further adapted for use as a source of protein in animal nutrition. Employing microalgae as an alternative source of protein in animal feeding is somehow a new concept. Many nutritional and toxicological studies have demonstrated the potential of algae biomass as a valued feed supplement or substitute for conventional protein sources such as soybean meal. While these alternative protein sources in livestock feeding may serve as useful tools, parameters such as feed safety and acceptability should be monitored based on feed safety regulations. [ABSTRACT FROM AUTHOR]
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- 2024
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23. Chapter 26 - Gellan gum as a drug delivery system: reproductive and developmental toxicity, and its potential role in the management of female reproductive disorders
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Roychoudhury, Shubhadeep, Roy, Vikram Deb, Dey, Anwesha, Roychoudhury, Shatabhisha, Nayak, Amit Kumar, Slama, Petr, and Kolesarova, Adriana
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- 2024
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24. Monitoring of taurine dietary supplementation effect on parameters of Duroc boar ejaculate in summer season.
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Pribilova, Magdalena, Skalickova, Sylvie, Urbankova, Lenka, Baholet, Daria, Nevrkla, Pavel, Kopec, Tomas, Slama, Petr, and Horky, Pavel
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DIETARY supplements ,TAURINE ,BOARS ,MICROSCOPY ,SUMMER ,EXPERIMENTAL groups - Abstract
The aim of this experiment was to find out whether the taurine supplementation in daily ration had an effect on quantity or quality of Duroc boar ejaculate. The experiment duration was from June to August, when it could assumed the possible occurrence of heat stress. For the study was chosen 12 Duroc boars of approximately the same age and condition. The control group of 6 Duroc boars was fed only by basic diet and the experimental group of 6 Duroc boars was fed by the same basic diet with supplementation of 15 g taurine/boar/day. Ejaculate was collected once a week by hand glowed technique. From ejaculate parameters were monitored volume of ejaculate, sperm concentration, total amount of sperm, morphologically abnormal sperm, taurine concentration and GSH/GSSH concentration. From microscopic analysis, results were statistically significant in motility in June and July (P<0.05). In biochemical results, a significant difference (P<0.05) has been found between the experimental groups in the concentrations of taurine as well as GSH/GSSG in ejaculate which indicates the effect of heat stress on boars during the experimental period. [ABSTRACT FROM AUTHOR]
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- 2024
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25. Integrated Network Pharmacology Approach to Evaluate Bioactive Phytochemicals of Acalypha indica and Their Mechanistic Actions to Suppress Target Genes of Tuberculosis.
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Harakeh, Steve, Niyazi, Hanouf A., Niyazi, Hatoon A., Abdalal, Shaymaa A., Mokhtar, Jawahir A., Almuhayawi, Mohammed S., Alkuwaity, Khalil K., Abujamel, Turki S., Slama, Petr, and Haque, Shafiul
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- 2024
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26. Study on the antioxidant potential of Catharanthus species and its thermal stability in sunflower oil model system.
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Awasthi, Yogesh Kumar, Sharma, RenuB., Rustagi, Sarvesh, Thakur, Arti, Katyal, Mehak, Thakur, Sheetal, Dulta, Kanika, Aman, Junaid, Malik, Sumira, and Slama, Petr
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- 2024
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27. COMPARISON OF CELL DEATH RATE IN VARIOUS CHICKEN LYMPHOCYTES POPULATIONS IN A RESPONSE TO THREE TEMPERATURE TREATMENTS.
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Zmrhal, Vladimir, Svoradova, Andrea, Olexikova, Lucia, Chrenek, Peter, Vasicek, Jaromir, and Slama, Petr
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T cells ,CELL death ,LYMPHOCYTES ,CHICKENS ,B cells ,DEATH rate ,POULTRY breeding ,BODY temperature regulation - Abstract
The goal of the experiment was to evaluate susceptibility of lymphocytes populations derived from bursa of Fabricius, spleen, thymus, and blood to temperature treatments in vitro. Temperatures used in study was 37 °C (thermoneutral), 41 °C (mild heat stress) and 45 °C (severe heat stress). Cells were incubated for 8 hours and after 3 and 8 hours were measured numbers of apoptotic, necrotic and CellROX positive cells by flow cytometry. Representation of live lymphocyte phenotypes (CD3, CD4, CD8, BU1) in cell populations were also measured. At all temperature treatments, thymus lymphocytes population had the lowest (p < 0.05) percentage of apoptotic cells. On the other hand, significantly highest numbers (p < 0.05) of apoptotic cells were found in bursal lymphocytes after 8 hours of incubation. Differences in numbers of necrotic cells were more pronounced at 45 °C, where after 3 and 8 hours of incubation were significantly highest numbers (p < 0.05) of necrotic cells in spleen. Increasing temperature induce production of reactive oxygen species (ROS) in cells and highest proportion (p < 0.05) of ROS-positive cells were found in bursal and spleen cell population after 8 hours of incubation. Transmission electron microscopy showed loss of mitochondrial matrix and disrupted mitochondrial membrane in mitochondria of lymphocytes at 45 °C as initial damage caused by ROS. From individual cell phenotypes, there were significantly decreased (p < 0.05) B lymphocytes in bursa of Fabricius, CD4+ and CD8+ lymphocytes in thymus and whole T lymphocytes population in spleen at 45 °C. Various susceptibility to temperature can be predictive factor of worse function in some organs in stress conditions where body temperature increase. [ABSTRACT FROM AUTHOR]
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- 2023
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28. Environmental and Genetic Traffic in the Journey from Sperm to Offspring.
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Sengupta, Pallav, Dutta, Sulagna, Liew, Fong Fong, Dhawan, Vidhu, Das, Biprojit, Mottola, Filomena, Slama, Petr, Rocco, Lucia, and Roychoudhury, Shubhadeep
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SPERMATOZOA ,REPRODUCTIVE health ,GENETICS ,SEMEN analysis ,FERTILITY ,EPIGENETICS - Abstract
Recent advancements in the understanding of how sperm develop into offspring have shown complex interactions between environmental influences and genetic factors. The past decade, marked by a research surge, has not only highlighted the profound impact of paternal contributions on fertility and reproductive outcomes but also revolutionized our comprehension by unveiling how parental factors sculpt traits in successive generations through mechanisms that extend beyond traditional inheritance patterns. Studies have shown that offspring are more susceptible to environmental factors, especially during critical phases of growth. While these factors are broadly detrimental to health, their effects are especially acute during these periods. Moving beyond the immutable nature of the genome, the epigenetic profile of cells emerges as a dynamic architecture. This flexibility renders it susceptible to environmental disruptions. The primary objective of this review is to shed light on the diverse processes through which environmental agents affect male reproductive capacity. Additionally, it explores the consequences of paternal environmental interactions, demonstrating how interactions can reverberate in the offspring. It encompasses direct genetic changes as well as a broad spectrum of epigenetic adaptations. By consolidating current empirically supported research, it offers an exhaustive perspective on the interwoven trajectories of the environment, genetics, and epigenetics in the elaborate transition from sperm to offspring. [ABSTRACT FROM AUTHOR]
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- 2023
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29. Radical scavenging activity of Chlorophytum borivilianum L. root extract and its protective role in cauda epididymal sperm integrity in Mus musculus after gamma irradiation
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Vyas, Ruchi, Kesari, Kavindra Kumar, Lukac, Norbert, Slama, Petr, Roychoudhury, Shubhadeep, Sisodia, Rashmi, University of Rajasthan, Department of Applied Physics, Slovak University of Agriculture in Nitra, Mendel University in Brno, Assam University, Aalto-yliopisto, and Aalto University
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sperm characteristics ,sperm maturation ,oxidative stress ,Cell Biology ,Chlorophytum borivilianum ,male fertility ,Developmental Biology - Abstract
Background:Chlorophytumborivilianum L. is a recognized herbal medicine for the management of impotency in South Asian countries. In Ayurveda, it is used for the management of multiple health conditions, including diabetes, infection, and cardiovascular diseases. Parts of the plant have been used as excellent antioxidants and scavengers of free radicals. Since oxidative stress plays an important role in spermatogenesis and fertility in male populations, this study evaluated the role of ethanolic extract of C. borivilianum roots in epididymal sperm maturation against adversities posed by ionizing gamma irradiation.Materials and methods: Antioxidant potential of C. borivilianum root extract (CRE) was evaluated through DPPH (2,2-diphenylpicrylhydrazyl) and NO (nitric oxide) scavenging assays. Four groups of healthy Swiss albino mice were constituted, which were labeled as follows: Group I: sham control, Group II: 7-day pre-treatment with 50 mg/kg CRE, Group III: 6 Gy irradiation without pre-treatment, and Group IV: 7-day pre-treatment with 50 mg/kg CRE and 6 Gy irradiation on day 7. Swiss albino mice were observed for 30 days and later sacrificed to evaluate sperm quality parameters.Results: CRE showed a remarkable antioxidant potential with IC50 values of 46.37 μg/ml and 98.39 μg/ml for DPPH and NO, respectively. A significant decline (p < 0.001) in cauda epididymal sperm count, motility, and viability was observed in Group III animals. Group IV also showed a substantial decline (p < 0.01) in all three parameters compared to Group I; nonetheless, these were significantly higher than Group III. Morphological alterations indicated a coiled and bent tail, with the presence of cytoplasmic droplets in Group III, which declined substantially in Group IV. The ultrastructure of sperm indicated higher curvature of hook in Group III than Group IV, indicating specific interferences in the sperm maturation process.Conclusion: It was concluded that pre-treatment with 50 mg/kg body weight of CRE could protect sperm during epididymal maturation against oxidative stress.
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- 2023
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30. Antimicrobial Susceptibility and Resistance Genes in Streptococcus uberis Isolated from Bovine Mastitis in the Czech Republic.
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Zouharova, Monika, Nedbalcova, Katerina, Matiaskova, Katarina, Slama, Petr, and Matiasovic, Jan
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BOVINE mastitis ,DRUG resistance in microorganisms ,MYCOPLASMA bovis ,NUCLEOTIDE sequencing ,GENES ,STREPTOCOCCUS ,DAIRY farms ,DRUG resistance in bacteria - Abstract
Streptococcus uberis is one of the most important causative agents of mastitis and is a common reason for the use of antimicrobials in dairy cows. In this study, we assessed the antimicrobial susceptibility of 667 S. uberis isolates originating from 216 Czech dairy farms collected between 2019 and 2023 using the broth microdilution method. We tested 140 of the isolates for the presence of antimicrobial genes using whole-genome sequencing and evaluated their relationship with phenotypic resistance. Streptococcus uberis isolates showed high levels of resistance to tetracycline (59%), followed by streptomycin (38%) and clindamycin (29%). Although all of the isolates were susceptible to beta-lactams, a relatively high percentage of intermediately susceptible isolates was recorded for ampicillin (44%) and penicillin (18%). The isolates were mainly resistant to tetracycline alone (31.3%); the second most frequent occurrence of the phenotypic profile was simultaneous resistance to tetracycline, streptomycin, and clindamycin (16.6%). The occurrence of antibiotic resistance genes did not always match the phenotypic results; in total, 36.8% of isolates that possessed the ant(6)-Ia gene did not show phenotypic resistance to streptomycin. To a lesser extent, silent genes were also detected in clindamycin and tetracycline. This study confirmed the high susceptibility of S. uberis to penicillins used as first-line antimicrobials for S. uberis mastitis treatment. [ABSTRACT FROM AUTHOR]
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- 2023
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31. POLYCAPROLACTONE FIBER-BASED BOVINE DENDRITIC CELL DEVELOPMENT AND THREE- DIMENSIONAL CULTURE IN VITRO.
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Kratochvilova, Lucie, Venusova, Eva, Zavadilova, Terezie, Svec, Pavel, Pavlik, Ales, Hleba, Lukas, Jong-Young Kwak, and Slama, Petr
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DENDRITIC cells ,CELL culture ,POLYCAPROLACTONE ,BOS ,MONOCYTES - Abstract
Two-dimensional (2D) cell culture systems are normally used for in vitro experiments. These systems have some drawbacks which affect results of in vitro experiments because cultured cells have different morphology and physiological properties comparing to in vivo models. Therefore, there are current technique to develop three-dimensional (3D) cell culture systems which are closer to the environment in real tissues. In our study, we used polycaprolactone fiber scaffold for culture of bovine monocytes to develop dendritic cells (DCs) from those cells. Cultured monocytes in the polycaprolactone nanofiber scaffold differentiated to DCs. The differentiated DCs showed a 3D structure in the scaffold. These results suggest that this method is suitable for the development of DCs in a manner of three-dimension. These methods are perspective for bovine cell culture and has advantages compare to conventional 2D culture systems. [ABSTRACT FROM AUTHOR]
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- 2023
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32. IMPORTANCE OF SELECTED PROTEINS OF COMPACT BONE TISSUE IN POULTRY.
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Steinerova, Michala, Nedomova, Sarka, Slama, Petr, and Pavlik, Ales
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COMPACT bone ,BONE metabolism ,PROTEIN structure ,POULTRY ,PROTEINS - Abstract
Within modern poultry lines, the integrity of the skeleton is subjected to increasing genetic and production stress, which in many cases leads to different health problems of the skeletal system, including problems with osteoporosis and the development of fractures. The role of genetics in bone integrity has been demonstrated by several studies, while the knowledge gained from the targeted study of genes, i.e., proteins that play an important role in bone metabolism, is of great value both for skeletal health and may provide new clues to the biological processes underlying diseases leading to the weakening of the bones. In addition to summarizing basic knowledge about bone metabolism, this review provides insight into the structure and function of proteins that are part of compact bone tissue, focusing on noncollagenous proteins and proteins that are encoded by genes involved in signaling pathways that play an important role in bone metabolism. [ABSTRACT FROM AUTHOR]
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- 2023
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33. Optimization and Characterization of a Novel Antioxidant Naringenin-Loaded Hydrogel for Encouraging Re-Epithelization in Chronic Diabetic Wounds: A Preclinical Study.
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Raina, Neha, Haque, Shafiul, Tuli, Hardeep Singh, Jain, Atul, Slama, Petr, and Gupta, Madhu
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- 2023
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34. Aluminum Oxide and Zinc Oxide Induced Nanotoxicity in Rat Brain, Heart, and Lung
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YOUSEF, Mokhtar Ibrahim, ROYCHOUDHURY, Shubhadeep, JAFAAR, Karrar Sabah, SLAMA, Petr, KESARI, Kavindra Kumar, KAMEL, Maher Abd El-Nabi, Alexandria University, Assam University, Mendel University in Brno, Department of Applied Physics, Aalto-yliopisto, and Aalto University
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p53 ,Histology ,LIVER ,Physiology ,Metal Nanoparticles ,Aluminum oxide ,Antioxidants ,TOXICITY ,DISEASE ,Zinc oxide ,Aluminum Oxide ,Animals ,EXPOSURE ,ZNO NANOPARTICLES ,Lung ,NANOMATERIALS ,Brain ,Articles ,General Medicine ,Neurotransmitters ,MITOCHONDRIAL BIOGENESIS ,BARRIER ,Acetylcholine ,Rats ,Oxidative Stress ,Oxidative stress ,CELLS ,Nanoparticles ,Cytokines ,Gene expression ,Zinc Oxide - Abstract
Nanomaterials or nanoparticles are commonly used in the cosmetics, medicine, and food industries. Many researchers studied the possible side effects of several nanoparticles including aluminum oxide (Al2O3-nps) and zinc oxide nanoparticles (ZnO-nps). Although, there is limited information available on their direct or side effects, especially on the brain, heart, and lung functions. This study aimed to investigate the neurotoxicity, cardiotoxicity, and lung toxicity induced by Al2O3-nps and ZnO-nps or in combination via studying changes in gene expression, alteration in cytokine production, tumor suppressor protein p53, neurotransmitters, oxidative stress, and the histological and morphological changes. Obtained results showed that Al2O3-nps, ZnO-nps and their combination cause an increase in 8-hydroxy-2 acute accent -deoxyguanosine (8-OHdG), cytokines, p53, oxidative stress, creatine kinase, norepinephrine, acetylcholine (ACh), and lipid profile. Moreover, significant changes in the gene expression of mitochondrial transcription factor-A (mtTFA) and peroxisome proliferator activator receptor-gamma-coactivator-1 alpha (PGC-1 alpha) were also noted. On the other hand, a significant decrease in the levels of antioxidant enzymes, total antioxidant capacity (TAC), reduced glutathione (GSH), paraoxonase 1 (PON1), neurotransmitters (dopamine - DA, and serotonin - SER), and the activity of acetylcholine esterase (AChE) in the brain, heart, and lung were found. Additionally, these results were confirmed by histological examinations. The present study revealed that the toxic effects were more when these nanoparticle doses are used in combination. Thus, Al2O3-nps and ZnO-nps may behave as neurotoxic, cardiotoxic, and lung toxic, especially upon exposure to rats in combination.
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- 2022
35. The Influence of Heat Stress on Chicken Immune System and Mitigation of Negative Impacts by Baicalin and Baicalein.
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Zmrhal, Vladimir, Svoradova, Andrea, Venusova, Eva, and Slama, Petr
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CHICKENS ,IMMUNE system ,LYMPHOID tissue ,POULTRY farming ,IMMUNOREGULATION ,AVIAN influenza - Abstract
Simple Summary: Research in the field of heat stress in poultry focusing on additives with immunomodulatory properties is reviewed here. Modulations of the immune system components are strongly associated with the negative impacts of heat stress on poultry production. The research reported the anti-inflammatory and antioxidant properties of baicalin and baicalein to support their benefits for poultry under heat-stress conditions. Therefore, these two flavonoids can mitigate the negative impacts of heat stress on the immune system and improve poultry health and performance under stressful conditions. Heat stress (HS) in poultry husbandry is an important stressor and with increasing global temperatures its importance will increase. The negative effects of stress on the quality and quantity of poultry production are described in a range of research studies. However, a lack of attention is devoted to the impacts of HS on individual chicken immune cells and whole lymphoid tissue in birds. Oxidative stress and increased inflammation are accompanying processes of HS, but with deleterious effects on the whole organism. They play a key role in the inflammation and oxidative stress of the chicken immune system. There are a range of strategies that can help mitigate the adverse effects of HS in poultry. Phytochemicals are well studied and some of them report promising results to mitigate oxidative stress and inflammation, a major consequence of HS. Current studies revealed that mitigating these two main impacts of HS will be a key factor in solving the problem of increasing temperatures in poultry production. Improved function of the chicken immune system is another benefit of using phytochemicals in poultry due to the importance of poultry health management in today's post pandemic world. Based on the current literature, baicalin and baicalein have proven to have strong anti-inflammatory and antioxidative effects in mammalian and avian models. Taken together, this review is dedicated to collecting the literature about the known effects of HS on chicken immune cells and lymphoid tissue. The second part of the review is dedicated to the potential use of baicalin and baicalein in poultry to mitigate the negative impacts of HS on poultry production. [ABSTRACT FROM AUTHOR]
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- 2023
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36. Rhizospheric bacteria: the key to sustainable heavy metal detoxification strategies.
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Joshi, Samiksha, Gangola, Saurabh, Bhandari, Geeta, Bhandari, Narendra Singh, Nainwal, Deepa, Rani, Anju, Malik, Sumira, and Slama, Petr
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HEAVY metals ,PLANT growth ,BIOLOGICAL transport ,MICROBIAL metabolism ,MICROBIAL cells ,BACTERIA - Abstract
The increasing rate of industrialization, anthropogenic, and geological activities have expedited the release of heavy metals (HMs) at higher concentration in environment. HM contamination resulting due to its persistent nature, injudicious use poses a potential threat by causing metal toxicities in humans and animals as well as severe damage to aquatic organisms. Bioremediation is an emerging and reliable solution for mitigation of these contaminants using rhizospheric microorganisms in an environmentally safe manner. The strategies are based on exploiting microbial metabolism and various approaches developed by plant growth promoting bacteria (PGPB) to minimize the toxicity concentration of HM at optimum levels for the environmental clean-up. Rhizospheric bacteria are employed for significant growth of plants in soil contaminated with HM. Exploitation of bacteria possessing plant-beneficial traits as well as metal detoxifying property is an economical and promising approach for bioremediation of HM. Microbial cells exhibit different mechanisms of HM resistance such as active transport, extra cellular barrier, extracellular and intracellular sequestration, and reduction of HM. Tolerance of HM in microorganisms may be chromosomal or plasmid originated. Proteins such as MerT and MerA of mer operon and czcCBA, ArsR, ArsA, ArsD, ArsB, and ArsC genes are responsible for metal detoxification in bacterial cell. This review gives insights about the potential of rhizospheric bacteria in HM removal from various polluted areas. In addition, it also gives deep insights about different mechanism of action expressed by microorganisms for HM detoxification. The dual-purpose use of biological agent as plant growth enhancement and remediation of HM contaminated site is the most significant future prospect of this article. [ABSTRACT FROM AUTHOR]
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- 2023
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37. Reactive oxygen species mediated apoptotic death of colon cancer cells: therapeutic potential of plant derived alkaloids.
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Nelson, Vinod K., Nuli, Mohana Vamsi, Mastanaiah, Juturu, T. S., Mohamed Saleem, Birudala, Geetha, Jamous, Yahya F., Alshargi, Omar, Kotha, Kranthi Kumar, Sudhan, Hari Hara, Mani, Ravishankar Ram, Muthumanickam, Alagusundaram, Niranjan, Divya, Jain, Nem Kumar, Agrawal, Ankur, Jadon, Arvind Singh, Mayasa, Vinyas, Jha, Niraj Kumar, Kolesarova, Adriana, Slama, Petr, and Roychoudhury, Shubhadeep
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COLON cancer ,REACTIVE oxygen species ,CANCER cells ,DRUG resistance in cancer cells ,MEDICINAL plants ,HOMEOSTASIS - Abstract
Colorectal cancer (CRC) is one of the most deaths causing diseases worldwide. Several risk factors including hormones like insulin and insulin like growth factors (e.g., IGF-1) have been considered responsible for growth and progression of colon cancer. Though there is a huge advancement in the available screening as well as treatment techniques for CRC. There is no significant decrease in the mortality of cancer patients. Moreover, the current treatment approaches for CRC are associated with serious challenges like drug resistance and cancer regrowth. Given the severity of the disease, there is an urgent need for novel therapeutic agents with ideal characteristics. Several pieces of evidence suggested that natural products, specifically medicinal plants, and derived phytochemicals may serve as potential sources for novel drug discovery for various diseases including cancer. On the other hand, cancer cells like colon cancer require a high basal level of reactive oxygen species (ROS) to maintain its own cellular functions. However, excess production of intracellular ROS leads to cancer cell death via disturbing cellular redox homeostasis. Therefore, medicinal plants and derived phytocompounds that can enhance the intracellular ROS and induce apoptotic cell death in cancer cells via modulating various molecular targets including IGF-1 could be potential therapeutic agents. Alkaloids form a major class of such phytoconstituents that can play a key role in cancer prevention. Moreover, several preclinical and clinical studies have also evidenced that these compounds show potent anti-colon cancer effects and exhibit negligible toxicity towards the normal cells. Hence, the present evidencebased study aimed to provide an update on various alkaloids that have been reported to induce ROS-mediated apoptosis in colon cancer cells via targeting various cellular components including hormones and growth factors, which play a role in metastasis, angiogenesis, proliferation, and invasion. This study also provides an individual account on each such alkaloid that underwent clinical trials either alone or in combination with other clinical drugs. In addition, various classes of phytochemicals that induce ROS-mediated cell death in different kinds of cancers including colon cancer are discussed. [ABSTRACT FROM AUTHOR]
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- 2023
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38. Nano-biochar: recent progress, challenges, and opportunities for sustainable environmental remediation.
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Bhandari, Geeta, Gangola, Saurabh, Dhasmana, Archna, Rajput, Vishal, Gupta, Sanjay, Malik, Sumira, and Slama, Petr
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ENVIRONMENTAL remediation ,BIOCHAR ,PHOTOCATALYSTS ,LIGNOCELLULOSE ,POLLUTANTS ,HEAVY metals ,SURFACE area - Abstract
Biochar is a carbonaceous by-product of lignocellulosic biomass developed by various thermochemical processes. Biochar can be transformed into "nanobiochar" by size reduction to nano-meters level. Nano-biochar presents remarkable physico-chemical behavior in comparison to macro-biochar including; higher stability, unique nanostructure, higher catalytic ability, larger specific surface area, higher porosity, improved surface functionality, and surface active sites. Nano-biochar efficiently regulates the transport and absorption of vital microand macro-nutrients, in addition to toxic contaminants (heavy metals, pesticides, antibiotics). However an extensive understanding of the recent nano-biochar studies is essential for large scale implementations, including development, physico-chemical properties and targeted use. Nano-biochar toxicity on different organisms and its in-direct effect on humans is an important issue of concern and needs to be extensively evaluated for large scale applications. This review provides a detailed insight on nanobiochar research for (1) development methodologies, (2) compositions and properties, (3) characterization methods, (4) potentiality as emerging sorbent, photocatalyst, enzyme carrier for environmental application, and (5) environmental concerns. [ABSTRACT FROM AUTHOR]
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- 2023
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39. Selenium Nanoparticles as Potential Antioxidants to Improve Semen Quality in Boars.
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Horky, Pavel, Urbankova, Lenka, Bano, Iqra, Kopec, Tomas, Nevrkla, Pavel, Pribilova, Magdalena, Baholet, Daria, Chilala, Pompido, Slama, Petr, and Skalickova, Sylvie
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SELENIUM ,BOARS ,SELENIUM supplements ,GLUTATHIONE peroxidase ,NANOPARTICLES ,SEMEN analysis ,MALE infertility - Abstract
Simple Summary: Duroc boars were supplemented by sodium selenite or selenium nanoparticles at the dose of 0.3 mg Se/kg/day for 126 days. Sampling was carried out at days 0, 42, 84 and 126. Sperm qualitative parameters and antioxidant activity were compared with those of the control group (without selenium supplementation). The findings indicate that SeNPs slightly improved GPx activity, and both SeNPs and sodium selenite influenced the antioxidant capacity of semen. This research also showed that both treatments did not affect semen qualitative parameters based on comparisons with the control group. Selenium is an essential compound which can influence the fertility of boars by a greater margin. In past decades, research was mainly focused on a bioavailability of various selenium forms and the effect on semen quality. Recently, nanotechnology has expanded the possibilities of selenium supplementation research. Twenty-one Duroc boars (three groups with seven boars each) were included in this experiment with the first group being a control group with no selenium supplementation, and the second group being supplemented with 0.3 mg Se/kg of selenium in inorganic form of Na
2 SeO3 . The third group was supplemented with selenium nanoparticles (100 nm) at the same dose as that of the second group. The experiment lasted for 126 days (three spermatogenesis cycles of boars) and the antioxidant parameters of boar semen were analysed at 42, 84 and 126 days, respectively. The antioxidant parameters (DPPH, FRAP, DMPD, GSH, GSSG) were not influenced by both Se2 NO3 and selenium nanoparticle supplementation during this experiment. At the end of the monitored period, significantly higher (p < 0.004) antioxidant readings were observed by using the ABTS method but not the DPPH, DMPD and FRAP methods on the supplemented groups compared to the control. Moreover, selenium-nanoparticle-supplemented groups showed elevated glutathione peroxidase activity in the seminal fluid (p < 0.008). However, the selenium nanoparticle supplementation has not shown an improving effect on sperm quality. This could be considered as a safe alternative to inorganic selenium as well as having a potential to enhance the antioxidant properties of the semen of boars. [ABSTRACT FROM AUTHOR]- Published
- 2023
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40. In-Vitro, In-Vivo AND In-Silico ANTIMICROBIAL ASSESSMENT OF Bacillus Subtilis (RB14) ITURIN A AGAINST Fusarium Graminearum MYOSIN I PROTEIN.
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Khan, Muddasir, Salman, Muhammad, Ali, Sher, Abdullah, Slama, Petr, Skladanka, Jiri, and Horky, Pavel
- Abstract
In this study Bacillus subtilis RB14 iturin A was screened by in-vitro, in-vivo, and in-silico approaches against Fusarium graminearum, causing a major threat to worldwide crop production. Lipopeptide iturin A was characterized by highperformance liquid chromatography (HPLC). Iturin A showed successful inhibitory potential (p<0.005) against a growing F. graminearum in varied concentrations (1.00, 0.50, 0.25, 0.125 M). Nevertheless, the lipopeptide ext ract revealed an upsurged growth in plant's height, weight, and roots weight. Evidently, such spp. prominently reduces the incidence of F. graminearum (23%). Moreover, in computational analysis, the iturin A has a -6.7 kcal/mol b inding affinity for myosin I protein, and due to this it inhibited the production of F. graminearum deoxynivalenol (DON) mycotoxin. To this an end, B. subtilis RB14 can be classified as a good biological candidate and capably produces a variety of biomarkers to diminish deleterious phytopathogens and can be used as biopesticide. [ABSTRACT FROM AUTHOR]
- Published
- 2023
41. A Perspective Review on Green Nanotechnology in Agro-Ecosystems: Opportunities for Sustainable Agricultural Practices & Environmental Remediation.
- Author
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Bhandari, Geeta, Dhasmana, Archna, Chaudhary, Parul, Gupta, Sanjay, Gangola, Saurabh, Gupta, Ashulekha, Rustagi, Sarvesh, Shende, Sudhir S., Rajput, Vishnu D., Minkina, Tatiana, Malik, Sumira, and Slama, Petr
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GREEN technology ,SUSTAINABILITY ,ENVIRONMENTAL remediation ,NANOTECHNOLOGY ,CHEMICAL processes ,AGRICULTURAL technology ,PHOTOSYNTHETICALLY active radiation (PAR) - Abstract
The modern agricultural system is facing the unprecedented task of contriving the extensive demand for agrarian production owing to population explosion and global climate change. The employment of Nanotechnology in agriculture has gained immense interest in recent times for the development of sustainable agricultural technologies and environmental remediation strategies. Nanotechnology pertains to the employment of nanoparticles and furnishes the potential to fabricate novel materials and products possessing improved quality. The nanomaterials may be used as; nanosensors, nanocides, nanofertilizers, nanobarcodes, and nano-remediators, which play a significant role in modern agricultural practices. However, the physical and chemical processes of nanoparticle production is neither economical nor environmentally sustainable. Therefore, the need for green or biogenic nanoparticles obtained from plants, bacteria, fungi or their metabolites has emerged as novel, sustainable, economical, biocompatible, and eco-friendly technology. In this perspective, the production and sources of biogenic nanoparticles and their implication in agro-ecosystems for crop productivity, soil health management, biocontrol, and environmental remediation have been focused on in this review. The potential development and implementation challenges are also explored. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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42. Phytochemicals from Indian ethnomedicines
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Fatima, Nishat, Baqri, Syed Shabihe Raza, Alsulimani, Ahmad, Fagoonee, Sharmila, Slama, Petr, Kesari, Kavindra Kumar, Roychoudhury, Shubhadeep, Haque, Shafiul, Shia PG College, Jazan University, CNR-ENEA-EURATOM Association, Mendel University in Brno, Department of Applied Physics, Assam University, Aalto-yliopisto, and Aalto University
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Oxidative stress ,Phytochemicals ,ROS ,Ethnomedicine ,Cancer - Abstract
Publisher Copyright: © 2021 by the authors. Licensee MDPI, Basel, Switzerland. Oxygen is indispensable for most organisms on the earth because of its role in respiration. However, it is also associated with several unwanted effects which may sometimes prove fatal in the long run. Such effects are more evident in cells exposed to strong oxidants containing reactive oxygen species (ROS). The adverse outcomes of oxidative metabolism are referred to as oxidative stress, which is a staple theme in contemporary medical research. Oxidative stress leads to plasma membrane disruption through lipid peroxidation and has several other deleterious effects. A large body of literature suggests the involvement of ROS in cancer, ageing, and several other health haz-ards of the modern world. Plant-based cures for these conditions are desperately sought after as supposedly safer alternatives to mainstream medicines. Phytochemicals, which constitute a diverse group of plant-based substances with varying roles in oxidative reactions of the body, are impli-cated in the treatment of cancer, aging, and all other ROS-induced anomalies. This review presents a summary of important phytochemicals extracted from medicinal plants which are a part of Indian ethnomedicine and Ayurveda and describes their possible therapeutic significance.
- Published
- 2021
43. List of contributors
- Author
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Aderibigbe, Blessing Atim, Ahuja, Munish, Alaimo, Agustina, Alam, Mahboob, Ali, Syed Sarfaraz, Ansari, Azim, Askari, Vahid Reza, Atanase, Leonard Ionut, Azizi, Shohreh, Banitaba, Seyedeh Nooshin, Baradaran Rahimi, Vafa, Barroca-Ferreira, J., Basu, Aalok, Batista-Silva, J.P., Bindhani, Sabitri, Biswal, Snehanjana, Bose, Anindya, Bugarski, Branko, Costa, D., Costa, Eduardo, Das, Subhraseema, de Mello Ferreira, Ivana Lourenço, Dey, Anwesha, Di Santo, M. Carolina, Divya, Domínguez Rubio, A. Paula, D’Antoni, Cecilia L., Ezzati, Shiva, Fahimirad, Shohreh, Ganesh Kumar, Y., Gautam, Drashya, Ghasempour, Zahra, Gomes, D., Goyal, Sameer N., Hadi, Mohd Abdul, Hamcerencu, Mihaela, Hasnain, Md Saquib, Hooda, Sunita, Huda, Nurul, Kamaruddin, Anis Farhan, Khademolqorani, Sanaz, Khairnar, Mahendra, Kolesarova, Adriana, Kouhi, Monireh, Kumar, Sarita, Kundu, Sonia, Lanbiliu, P., Li, Rachel W., Lin, G. David, Machado, Manuela, Melo da Costa, Marcia Parente, Milivojevic, Milan, Moghaddas Kia, Ehsan, Mohd Noor, Siti Noor Fazliah, Mydin, Rabiatul Basria S.M.N., Navanita, S.K., Nayak, Amit Kumar, Pahwa, Rimpy, Pajic-Lijakovic, Ivana, Panmei, Kungreiliu, Parumasivam, Thaigarajan, Passarinha, L.A., Pérez, Oscar E., Perrechil, F.A., Popa, Marcel, Rahmanian Devin, Pouria, Raman, Subashini, Rezaei, Mohammad, Roy, Vikram Deb, Roychoudhury, Shatabhisha, Roychoudhury, Shubhadeep, Sahoo, Rudra Narayan, Samal, Roopa Rani, Samaniego López, Cecilia, Saravanan, Chandrarohini, Saya, Laishram, Shaikh, Mohd Sayeed, Shanker, Kalakotla, Sharma, Rashmi, Siddique, Mohd Usman Mohd, Silva, F.G., Silva, Sara, Slama, Petr, Smith, Paul N., Sousa, A., Subuddhi, Usharani, Tafazzoli Mehrjerdi, Soheil, Tincu, Camelia, Vemireddy, Bala Gurivi Reddy, Vilela, J.A.P., Wiwanitkit, Viroj, Yasri, Sora, Zamanzade, Zeynab, and Zendedel, Elham
- Published
- 2024
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44. Effect of Staphylococcus aureus and Streptococcus uberis on apoptosis of bovine mammary gland lymphocytes
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Slama, Petr, Sladek, Zbysek, Rysanek, Dusan, and Langrova, Tereza
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- 2009
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45. Multidrug resistant Klebsiella Pneumoniae reservoir and their capsular resistance genes in cow farms of district Peshawar, Pakistan.
- Author
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Saddam, Saddam, Khan, Muddasir, Jamal, Muhsin, Rehman, Sadeeq Ur, Slama, Petr, and Horky, Pavel
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KLEBSIELLA pneumoniae ,COWS ,GENES ,VANCOMYCIN resistance ,DOMESTIC animals - Abstract
Klebsiella pneumoniae is a major zoonotic pathogen that causes a variety of severe illnesses as well as mastitis. The distribution of mastitis-causing K. Pneumoniae and its virulence factors vary by country and geographical location. The present study aimed to find out the occurrence of Multidrug-resistant (MDR) K. Pneumoniae and their capsular resistance genes which were undocumented previously in cow farms of district Peshawar, Pakistan. A total of 700 milk samples from symptomatic mastitic cows were screened for MDR K. Pneumoniae. Furthermore, the characterization of capsular resistance genes was done by molecular techniques. Among these samples, K. pneumoniae was found 180/700 (25.7%), while MDR K. pneumoniae was found 80/180 (44.4%). The antibiogram analysis revealed high resistance to Vancomycin (95%) while highly sensitive to Ceftazidime (80%). The distribution of capsular genes shows the most common serotype K2 gene 39/80 (48.7%), followed by serotype K1 gene 34/80 (42.5%), serotype K5 17/80 (21.2%), and serotype K54 13/80 (16.2), respectively. Moreover, the co-occurrence of serotypes K1+K2 was found at 11.25%, KI+K5 was 05%, K1+K54 was 3.75%, and K2+K5 was 7.5%, respectively. A statistically significant association (p ≤ 0.05) was found between predicted and discovered K. pneumoniae values. In conclusion, the presence of MDR K. pneumoniae in combination with capsular genes may be a possible threat to dairy farm animals and humans in Peshawar, Pakistan. It may give us special attention to follow up on hygienic practices in livestock management. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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46. In Silico Mining and Characterization of High-Quality SNP/Indels in Some Agro-Economically Important Species Belonging to the Family Euphorbiaceae.
- Author
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Sen, Surojit, Rathi, Sunayana, Sahu, Jagajjit, Mandal, Subhash C., Ray, Supratim, Slama, Petr, and Roychoudhury, Shubhadeep
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SINGLE nucleotide polymorphisms ,GENE expression ,GENETIC variation ,NUCLEOTIDE sequencing ,EUPHORBIACEAE - Abstract
(1) Background: To assess the genetic makeup among the agro-economically important members of Euphorbiaceae, the present study was conducted to identify and characterize high-quality single-nucleotide polymorphism (SNP) markers and their comparative distribution in exonic and intronic regions from the publicly available expressed sequence tags (ESTs). (2) Methods: Quality sequences obtained after pre-processing by an EG assembler were assembled into contigs using the CAP3 program at 95% identity; the mining of SNP was performed by QualitySNP; GENSCAN (standalone) was used for detecting the distribution of SNPs in the exonic and intronic regions. (3) Results: A total of 25,432 potential SNPs (pSNP) and 14,351 high-quality SNPs (qSNP), including 2276 indels, were detected from 260,479 EST sequences. The ratio of quality SNP to potential SNP ranged from 0.22 to 0.75. A higher frequency of transitions and transversions was observed more in the exonic than the intronic region, while indels were present more in the intronic region. C↔T (transition) was the most dominant nucleotide substitution, while in transversion, A↔T was the dominant nucleotide substitution, and in indel, A/- was dominant. (4) Conclusions: Detected SNP markers may be useful for linkage mapping; marker-assisted breeding; studying genetic diversity; mapping important phenotypic traits, such as adaptation or oil production; or disease resistance by targeting and screening mutations in important genes. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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47. Environmental factors-induced oxidative stress
- Author
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Roychoudhury, Shubhadeep, Chakraborty, Saptaparna, Choudhury, Arun Paul, Das, Anandan, Jha, Niraj Kumar, Slama, Petr, Nath, Monika, Massanyi, Peter, Ruokolainen, Janne, Kesari, Kavindra Kumar, Assam University, Sharda University, Mendel University in Brno, Slovak University of Agriculture in Nitra, Department of Applied Physics, Aalto-yliopisto, and Aalto University
- Subjects
Pesticide ,Endocrine-disrupting chemicals ,Radiation ,Heavy metals ,Hypogonadism ,Infertility ,Air pollution ,Erectile dysfunction ,Testosterone - Abstract
Publisher Copyright: © 2021 by the authors. Licensee MDPI, Basel, Switzerland. Copyright: Copyright 2021 Elsevier B.V., All rights reserved. Hypogonadism is an endocrine disorder characterized by inadequate serum testosterone production by the Leydig cells of the testis. It is triggered by alterations in the hypothalamic–pituitary– gonadal axis. Erectile dysfunction (ED) is another common disorder in men that involves an alteration in erectile response–organic, relational, or psychological. The incidence of hypogonadism and ED is common in men aged over 40 years. Hypogonadism (including late-onset hypogonadism) and ED may be linked to several environmental factors-induced oxidative stresses. The factors mainly include exposure to pesticides, radiation, air pollution, heavy metals and other endocrine-disrupting chemicals. These environmental risk factors may induce oxidative stress and lead to hormonal dysfunctions. To better understand the subject, the study used many keywords, including “hy-pogonadism”, “late-onset hypogonadism”, “testosterone”, “erectile dysfunction”, “reactive oxygen species”, “oxidative stress”, and “environmental pollution” in major online databases, such as SCO-PUS and PUBMED to extract relevant scientific information. Based on these parameters, this review summarizes a comprehensive insight into the important environmental issues that may have a direct or indirect association with hypogonadism and ED in men. The study concludes that environmental factors-induced oxidative stress may cause infertility in men. The hypothesis and outcomes were reviewed critically, and the mechanistic approaches are applied through oxidant-sensitive path-ways. This study also provides reccomendations on future therapeutic interventions and protective measures against such adverse environmental factors-induced hypogonadism and ED.
- Published
- 2021
48. Clinical Potential of Himalayan Herb Bergenia ligulata : An Evidence-Based Study.
- Author
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Roychoudhury, Shubhadeep, Das, Dipika, Das, Sandipan, Jha, Niraj Kumar, Pal, Mahadeb, Kolesarova, Adriana, Kesari, Kavindra Kumar, Kalita, Jogen C., and Slama, Petr
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TANNINS ,SYRINGIC acid ,CHLOROGENIC acid ,TRADITIONAL medicine ,BIOACTIVE compounds ,GALLIC acid ,HERBAL medicine - Abstract
Herbal products have been used in traditional systems of medicine and by ethnic healers for ages to treat various diseases. Currently, it is estimated that about 80% of people worldwide use herbal traditional medicines against various ailments, partly due to easy accessibility and low cost, and the lower side effects they pose. Bergenia ligulata, a herb ranging from the Himalayas to the foothills, including the north-eastern states of India, has traditionally been used as a remedy against various diseases, most prominently kidney stones. The medicinal properties of B. ligulata have been attributed to bergenin, its most potent bioactive component. Apart from bergenin, the other compounds available in B. ligulata are arbutin, gallic acid, protocatechuic acid, chlorogenic acid, syringic acid, catechin, ferulic acid, afzelechin, paashaanolactone, caryophyllene, 1,8-cineole, β-eudesmol, stigmasterol, β-sitosterol, parasorbic acid, 3-methyl-2-buten-1-ol, phytol, terpinen-4-ol, tannic acid, isovalaric acid, avicularin, quercetin, reynoutrin, and sitoinoside I. This review summarizes various medicinal properties of the herb, along with providing deep insight into its bioactive molecules and their potential roles in the amelioration of human ailments. Additionally, the possible mechanism(s) of action of the herb's anti-urolithiatic, antioxidative, antipyretic, anti-diabetic, anti-inflammatory and hepatoprotective properties are discussed. This comprehensive documentation will help researchers to better understand the medicinal uses of the herb. Further studies on B. ligulata can lead to the discovery of new drug(s) and therapeutics for various ailments. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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49. A Comparative Cross-Platform Analysis to Identify Potential Biomarker Genes for Evaluation of Teratozoospermia and Azoospermia.
- Author
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Das, Suchismita, Guha, Pokhraj, Nath, Monika, Das, Sandipan, Sen, Surojit, Sahu, Jagajjit, Kopanska, Marta, Dutta, Sulagna, Jamal, Qazi Mohammad Sajid, Kesari, Kavindra Kumar, Sengupta, Pallav, Slama, Petr, and Roychoudhury, Shubhadeep
- Subjects
AZOOSPERMIA ,MALE infertility ,SPERM competition ,BIOMARKERS ,OLIGOSPERMIA ,GENES ,COMPARATIVE studies ,PROTEIN folding - Abstract
Male infertility is a global public health concern. Teratozoospermia is a qualitative anomaly of spermatozoa morphology, contributing significantly to male infertility, whereas azoospermia is the complete absence of spermatozoa in the ejaculate. Thus, there is a serious need for unveiling the common origin and/or connection between both of these diseases, if any. This study aims to identify common potential biomarker genes of these two diseases via an in silico approach using a meta-analysis of microarray data. In this study, a differential expression analysis of genes was performed on four publicly available RNA microarray datasets, two each from teratozoospermia (GSE6872 and GSE6967) and azoospermia (GSE145467 and GSE25518). From the analysis, 118 DEGs were found to be common to teratozoospermia and azoospermia, and, interestingly, sperm autoantigenic protein 17 (SPA17) was found to possess the highest fold change value among all the DEGs (9.471), while coiled-coil domain-containing 90B (CCDC90B) and coiled-coil domain-containing 91 (CCDC91) genes were found to be common among three of analyses, i.e., Network Analyst, ExAtlas, and GEO2R. This observation indicates that SPA17, CCDC90B, and CCDC91 genes might have significant roles to play as potential biomarkers for teratozoospermia and azoospermia. Thus, our study opens a new window of research in this area and can provide an important theoretical basis for the diagnosis and treatment of both these diseases. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
50. Epigenetic factors in breast cancer therapy.
- Author
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Mathur, Runjhun, Jha, Niraj Kumar, Saini, Gaurav, Jha, Saurabh Kumar, Shukla, Sheo Prasad, Filipejová, Zita, Kesari, Kavindra Kumar, Iqbal, Danish, Nand, Parma, Upadhye, Vijay Jagdish, Jha, Abhimanyu Kumar, Roychoudhury, Shubhadeep, and Slama, Petr
- Subjects
BREAST cancer ,EPIGENETICS ,EPIGENOMICS ,CANCER treatment ,NUCLEOTIDE sequence ,GENE expression - Abstract
Epigenetic modifications are inherited differences in cellular phenotypes, such as cell gene expression alterations, that occur during somatic cell divisions (also, in rare circumstances, in germ line transmission), but no alterations to the DNA sequence are involved. Histone alterations, polycomb/trithorax associated proteins, short non-coding or short RNAs, long non--coding RNAs (lncRNAs), & DNA methylation are just a few biological processes involved in epigenetic events. These various modifications are intricately linked. The transcriptional potential of genes is closely conditioned by epigenetic control, which is crucial in normal growth and development. Epigenetic mechanisms transmit genomic adaptation to an environment, resulting in a specific phenotype. The purpose of this systematic review is to glance at the roles of Estrogen signalling, polycomb/trithorax associated proteins, DNA methylation in breast cancer progression, as well as epigenetic mechanisms in breast cancer therapy, with an emphasis on functionality, regulatory factors, therapeutic value, and future challenges. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
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