160 results on '"Ayral, P.-A."'
Search Results
2. A review of flash‐floods management: From hydrological modeling to crisis management
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Salma Sadkou, Guillaume Artigue, Noémie Fréalle, Pierre‐Alain Ayral, Séverin Pistre, Sophie Sauvagnargues, and Anne Johannet
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crisis management ,emergency decision‐making ,flash‐flood ,flash‐flood forecasting ,hydrological modeling ,machine learning ,River protective works. Regulation. Flood control ,TC530-537 ,Disasters and engineering ,TA495 - Abstract
Abstract In a context of climate change, flash‐floods are expected to increase in frequency. Considering their devastating impacts, it is primordial to safeguard the exposed population and infrastructure. This is the responsibility of crisis managers but they face difficulties due to the rapidity of these events. The focus of this study was to characterize the extent of the link between hydrologists and crisis managers. It also aimed to determine the limiting and the fostering factors to an effective integration of forecasting in crisis management during flash‐floods. This was achieved through an extensive and methodological study of available literature in selected platforms. The models encountered were characterized on multiple levels including the physical, geographical and crisis management level. The results revealed a limited link between the two involved parties with limiting factors such as the complexity of the modeling approach, the insufficient projection in the implications of operationality of the models proposed and the financial aspect. On the other hand, acknowledging the threat of flash‐floods and conducting cost–benefit‐analysis were pinpointed as fostering factors. This study showed to reconsider the forecasting methods employed, particularly, the integration of machine learning, and the needs of end‐user in these applications in a crisis management context.
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- 2024
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3. Genome sequencing identifies coding and non-coding variants for non-syndromic hearing loss
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Ramzan, Memoona, Duman, Duygu, Hendricks, LeShon Chere Peart, Guo, Shengru, Mutlu, Ahmet, Kalcioglu, Mahmut Tayyar, Seyhan, Serhat, Carranza, Claudia, Bonyadi, Murtaza, Mahdieh, Nejat, Yildirim-Baylan, Muzeyyen, Figueroa-Ildefonso, Erick, Alper, Ozgul, Atik, Tahir, Ayral, Abdurrahman, Bozan, Nazim, Balta, Burhan, Rivas, Christian, Manzoli, Gabrielle N., Huesca-Hernandez, Fabiola, Kuchay, Raja A. H., Durgut, Merve, Bademci, Guney, and Tekin, Mustafa
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- 2023
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4. Tracking potential Leptospira sources following human cases of leptospirosis: A One Health approach applied to an ecosystem in Brittany, France
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Elena Harran, Grégoire Kuntz, Anouk Decors, Pascale Bourhy, Alexandre Auffret, Clément Bigeard, Damien Cherel, Angeli Kodjo, Eric Le Dréan, Cyrille Lejas, Guillaume Lequeux, Marie-Agnès Pilard, Mathilde Pivette, Yvonnick Guillois, and Florence Ayral
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Maintenance community ,Cattle ,Rodents ,Reservoirs ,Zoonosis ,Rivers ,Medicine (General) ,R5-920 - Abstract
Pathogenic Leptospira can cause leptospirosis: a widespread, potentially fatal bacterial zoonosis whose risk is mediated by the soil and water features, animal host distributions, meaning the local ecosystem. When human cases of leptospirosis occur, it is challenging to track down their source because ecosystem-level epidemiological knowledge on Leptospira is needed. Between 2016 and 2019 in a focal riparian ecosystem, the human population experienced an outbreak and successive cases of leptospirosis attributable to L. kirschneri and L. interrogans. The epidemiological investigation was carried out using the One Health approach, as described in international health guidelines. As a first step in this process, we investigated leptospiral carriage in the main animal hosts found in the region. We sampled 143 nutrias, 17 muskrats, and 10 Norway rats using convenient trapping. DNA was extracted from their kidneys, lungs, and urine and subjected to real-time PCR (RT-PCR) targeting the Leptospira 16S rDNA and lfb1 genes. In the farms along the river's stretch of interest, we sampled serum from 439 cattle and used a microscopic agglutination test to detect the presence of antibodies against Leptospira. Urine samples were concomitantly obtained from 145 cattle and were used in two analyses: RT-PCR targeting the Leptospira 16S rDNA gene and Leptospira culturing. We found th, wt rodents were the most likely source of the L. interrogans behind the human cases. The cattle tested negative for Leptospira DNA but positive for antibodies against the serogroups implicated in the human cases. We failed to identify the potential source of the L. kirschneri responsible for several human cases of leptospirosis. Our results call for further clarification of the Leptospira maintenance community, which may comprise known maintenance hosts, such as rodents, as well as taxa not commonly considered to be maintenance hosts but that can still spread Leptospira. The resulting research network will collaboratively conduct future eco-epidemiological surveys to illuminate the leptospirosis risks faced by humans and animals within ecosystems.
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- 2024
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5. Seroprevalence and renal carriage of pathogenic Leptospira in livestock in Cotonou, Benin
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Rebecca Her, Laurent Crespin, Jonas Etougbétché, Karine Groud, Mathias Gnolonfoun, Audrey Chapron, Camille Evenamia, Gualbert Houéménou, Thibaut Lurier, Julien Cappelle, Gauthier Dobigny, and Florence Ayral
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abattoir ,Akaike's information criterion ,leptospirosis ,microscopic agglutination test ,PCR ,slum ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Background Leptospirosis is a zoonotic disease. It is particularly prevalent in tropical countries and has major consequences for human and animal health. In Benin, the disease's epidemiology remains poorly understood, especially in livestock, for which data are lacking. Objectives To characterise Leptospira seroprevalence and locally circulating serogroups in livestock from Cotonou and to estimate the prevalence of Leptospira renal carriage in cattle. Methods We conducted a cross‐sectional study in February 2020 during which livestock were sampled at an abattoir and in an impoverished city district. We analysed blood samples from 279 livestock animals (i.e. cattle, sheep, goats and pigs) using the microscopic agglutination test. Additionally, samples of renal tissue from 100 cattle underwent 16s rRNA (rrs) real‐time PCR analysis. Results For the 131 cattle, 85 sheep, and 50 goats tested, seroprevalence was 18% (95% confidence interval [CI] [12%, 26%]), 9% (95% CI [4%, 17%] and 2% (95% CI [0%, 9%]), respectively, and most of the seropositive animals were associated with 1:100 titres. All 13 pigs were seronegative. Leptospira DNA was found in the renal tissue of 10% (95% CI [5%, 18%]) of the cattle tested (n = 100). Leptospira borgpetersenii was the main species present (n = 7), but Leptospira interrogans (n = 2) and Leptospira kirschneri (n = 1) were also detected. Various serogroups (Canicola, Grippotyphosa, Sejroe, Icterohaemorrhagiae, Pomona, Pyrogenes, Australis and Autumnalis) were detected using microscopic agglutination test without a clear predominance of any of them. Conclusions These results suggest that abattoir workers and people living in close contact with livestock in poor urban areas are exposed to the risk of Leptospira infection.
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- 2024
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6. Novel GPR156 variants confirm its role in moderate sensorineural hearing loss
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Memoona Ramzan, Nazim Bozan, Serhat Seyhan, Mohammad Faraz Zafeer, Aburrahman Ayral, Duygu Duman, Guney Bademci, and Mustafa Tekin
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Medicine ,Science - Abstract
Abstract Hereditary hearing loss (HL) is a genetically heterogeneous disorder affecting people worldwide. The implementation of advanced sequencing technologies has significantly contributed to the identification of novel genes involved in HL. In this study, probands of two Turkish families with non-syndromic moderate HL were subjected to exome sequencing. The data analysis identified the c.600G > A (p.Thr200Thr) and c.1863dupG (p.His622fs) variants in GPR156, which co-segregated with the phenotype as an autosomal recessive trait in the respective families. The in silico predictions and a minigene assay showed that the c.600G > A variant disrupts mRNA splicing. This gene belongs to the family of G protein-coupled receptors whose function is not well established in the inner ear. GPR156 variants have very recently been reported to cause HL in three families. Our study from a different ethnic background confirms GPR156 as a bona fide gene involved in HL in humans. Further investigation towards the understanding of the role of GPCRs in the inner ear is warranted.
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- 2023
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7. Novel GPR156 variants confirm its role in moderate sensorineural hearing loss
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Ramzan, Memoona, Bozan, Nazim, Seyhan, Serhat, Zafeer, Mohammad Faraz, Ayral, Aburrahman, Duman, Duygu, Bademci, Guney, and Tekin, Mustafa
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- 2023
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8. Quantum computing with and for many-body physics
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Ayral, Thomas, Besserve, Pauline, Lacroix, Denis, and Ruiz Guzman, Edgar Andres
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- 2023
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9. Hybrid system coupling ozonation and nanofiltration with functionalized catalytic ceramic membrane for ibuprofen removal
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Szymański, Kacper, Mozia, Sylwia, Ayral, Andre, Brosillon, Stephan, and Mendret, Julie
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- 2023
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10. Landscape Drivers of Floods Genesis (Case Study: Mayo Mizao Peri-Urban Watershed in Far North Cameroon)
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Lucas Bouba, Pierre-Alain Ayral, and Sophie Sauvagnargues
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saturated hydraulic conductivity ,infiltration tests ,landscape feature ,runoff ,flood hazard ,Hydraulic engineering ,TC1-978 ,Water supply for domestic and industrial purposes ,TD201-500 - Abstract
Landscape has significant effects on hydrological processes in a watershed. In the Sudano-Sahelian area, watersheds are subjected to a quick change in landscape patterns due to the human footprint, and the exact role of the actual landscape features in the modification of the hydrological process remains elusive. This study tends to assess the effects of landscape on the genesis of the runoff in the Mayo Mizao watershed. To achieve this goal, 62 infiltration tests were performed at different points and depths (5 cm and 20 cm) using the double-ring method and the Porchet method. The results show that the combination of many factors (soil type, land use, and farming practices) can guide the hydraulic conductivity behavior of soils. For example, at 5 cm depths, clayey-evolved soils, such as vertisols and halomorphic soils, inhibit infiltration, as opposed to non-evolved mineral soils, such as lithosols and clayey-sandy soils. However, at 20 cm depths, gray soils with halomorphic tendencies followed by vertisols have a low sensitivity to infiltration, as opposed to soils derived from loose materials and halomorphic soils. For a given soil type, rainfed crops are the primary land use that runs against infiltration. However, the effect of tillage varies according to the soil type. Finally, given the extent of vertisols and halomorphic soils in the Far North region of Cameroon in general, and in the Mayo Mizao watershed in particular, and regarding the increase in cultivated areas, a probable reduction in the infiltration capacity of soils in this region is to be expected in the medium term. The results of this study can be used as a basis for land-use planning and sustainable watershed management in semi-arid tropical zones.
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- 2024
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11. The Diagnostic Value of Fine Needle Aspiration Biopsy in Parotid Tumors
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Ayral, Muhammed, Akil, Ferit, Yilmaz, Umit, Toprak, Serdar Ferit, Dedeoğlu, Serkan, and Akdağ, Mehmet
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- 2022
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12. Genetic diversity of Leptospira strains circulating in humans and dogs in France in 2019-2021
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Marta Garcia-Lopez, Celine Lorioux, Anais Soares, Sabine Trombert-Paolantoni, Elena Harran, Florence Ayral, Mathieu Picardeau, Zouheira Djelouadji, and Pascale Bourhy
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leptospirosis ,zoonotic disease ,human ,dog ,France ,lfb1 gene ,Microbiology ,QR1-502 - Abstract
Leptospirosis is a bacterial zoonotic disease. Humans and dogs are susceptible hosts, with similar clinical manifestations ranging from a febrile phase to multiple organ dysfunction. The incidence of leptospirosis in mainland France is relatively high, at about 1 case per 100,000 inhabitants, but our knowledge of the strains circulating in humans and dogs remains limited. We studied the polymorphism of the lfb1 gene sequences in an exhaustive database, to facilitate the identification of Leptospira strains. We identified 46 species-groups (SG) encompassing the eight pathogenic species of Leptospira. We sequenced the lfb1 gene amplification products from 170 biological samples collected from 2019 to 2021: 110 from humans and 60 from dogs. Epidemiological data, including vaccination status in dogs, were also collected. Three Leptospira species displaying considerable diversity were identified: L. interrogans, with eight lfb1 species-groups (including five new lfb1 species-groups) in humans and dogs; L. kirschneri, with two lfb1 species-groups in humans and dogs; and L. borgpetersenii, with one lfb1 species-group in humans only. The lfb1 species-group L. interrogans SG1, corresponding to serovar Icterohaemorrhagiae or Copenhageni, was frequently retrieved from both humans and dogs (n=67/110; 60.9% and n=59/60; 98.3% respectively). A high proportion of the affected dogs developed the disease despite vaccination (n=30/60; 50%). Genotyping with the polymorphic lfb1 gene is both robust and simple. This approach provided the first global picture of the Leptospira strains responsible for acute infections in mainland France, based on biological samples but without the need for culture. Identification of the Leptospira strains circulating and their changes over time will facilitate more precise epidemiological monitoring of susceptible and reservoir species. It should also facilitate the monitoring of environmental contamination, making it possible to implement preventive measures and to reduce the burden of this disease.
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- 2023
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13. Development of the Chrono-Systemic Timeline as a Tool for Cross-Sectional Analysis of Droughts—Application in Wallonia
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Kevin Thibaut, Pierre-Alain Ayral, and Pierre Ozer
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meteorological drought ,water scarcity ,climate change ,chrono-systemic timeline ,cross-sectional analysis ,risk management ,Hydraulic engineering ,TC1-978 ,Water supply for domestic and industrial purposes ,TD201-500 - Abstract
Drought is a complex hazard with multiple and often dramatic impacts, depending on the environmental and societal context of the affected area. In recent years, due to global warming, this phenomenon has been occurring more intensely and frequently, affecting regions worldwide, including Wallonia, the southern part of Belgium. This study aims to enhance our understanding of the interdisciplinary dynamics of drought in order to improve its anticipation and crisis management by stakeholders. To achieve these objectives, a cross-disciplinary analysis tool has been developed: the chrono-systemic timeline. Applied here to the severe drought of 2018 in Wallonia, this tool provides a comprehensive visual representation of the crisis, simultaneously offering temporal and multi-sectoral perspectives. The data incorporated into the model encompass environmental conditions, economic and social contexts, as well as political and administrative decisions made during the case study. The analysis of the chrono-systemic timeline reveals numerous interdisciplinary connections, a prolonged period of significant impacts, a gradual return to a ‘normal’ situation, and a reactive form of crisis management. In conclusion, the study emphasizes the importance of giving due consideration to the risks associated with water deficits and advocates for the implementation of anticipatory and adaptive management strategies to enhance our ability to effectively address droughts.
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- 2023
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14. Using Games to Build and Improve 10th Grade Students' Understanding of the Concept of Chemical Bonding and the Representation of Molecules
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Molvinger, Karine, Lautier, Gaëtan, and Ayral, Rose-Marie
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This article focuses on the case study of the concept of covalent bonding for 10th grade pupils in France. On the basis of their conceptions and difficulties, didactical engineering has been established that should lead to an improvement in the understanding of this concept. After analyzing the pupils' difficulties, we reflected on the construction of the concept of bonding as it is introduced in 10th grade. We argue that the use of several semiotic registers can promote the assimilation of the concept of covalent bonding. The results show that an approach based on learning games allows pupils to take an active part in the construction of the covalent bonding concept and that the stability of this construction depends greatly on the semiotic registers mobilized.
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- 2021
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15. Circulating serogroups of Leptospira in swine from a 7-year study in France (2011–2017)
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Jeanne Naudet, Laurent Crespin, Julien Cappelle, Angeli Kodjo, and Florence Ayral
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Leptospira ,Pig ,Reproductive failure ,Microagglutination test ,Australis ,Icterohaemorrhagiae ,Animal culture ,SF1-1100 ,Veterinary medicine ,SF600-1100 - Abstract
Abstract Background Leptospirosis is a widespread zoonotic disease caused by pathogenic Leptospira and is responsible for significant economic porcine livestock losses. Knowledge of Leptospira serogroups and their distributions is important for evaluation of the relevance of leptospirosis management measures, including use of the prophylactic vaccine that was recently made available in France. A retrospective study was conducted to determine the relationships between different circulating Leptospira serogroups. Pigs from across France presenting clinical signs suggestive of leptospirosis were tested with the microagglutination test (MAT) between 2011 and 2017. We used weighted averages to determine serogroup distributions according to MAT results and considering cross-reactions. Results A total of 19,395 pig sera, mostly from Brittany, were tested, and 22.7% were found to be positive for at least one Leptospira serogroup. Analysis of the 4,346 seropositive results for which the putative infective serogroup could be defined, revealed that two out of ten serogroups were much more frequent than the others: Australis (48.5%) and Icterohaemorrhagiae (38.2%). Other serogroups, including Autumnalis, Panama, Ballum, Tarassovi, Sejroe, Grippotyphosa, Bataviae, and Pomona, were less common. Conclusions Although diagnostic laboratory data cannot be extrapolated to infer the distribution of Leptospira serogroups at the nationwide scale in France, the analysis of such data can provide an overview of the relationship between circulating Leptospira serogroups in space and time. During the last decade, protection against the serogroups Australis and Icterohaemorrhagiae would have prevented most of the clinical porcine leptospirosis cases in the large number of farms that we studied. In the future, epidemiological information related to circulating Leptospira serogroups should be extracted from data with a standardized approach for use in nationwide or international surveillance and prophylactic strategy support.
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- 2022
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16. Seroprevalence of Francisella tularensis in patients with neck mass complaints
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Serdar Ferit Toprak, Muhammed Ayral, Serkan Dedeoğlu, Erdal Özbek, and Hakan Temiz
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Neck mass ,tularemia ,seroprevalence ,Medicine - Abstract
Aim: Tularemia is a zoonotic disease endemic in the northern hemisphere. The causative agent of the disease is Francisella tularensis. F.tularensis is endemic in Turkey, predominantly in the Marmara and Black Sea regions, and causes small outbreaks. This study aimed to investigate the seroprevalence of F.tularensis in patients admitted to the Otorhinolaryngology outpatient clinic with the complaint of neck mass by using two different methods. Methods: Serum samples were collected from patients who were admitted to the Otorhinolaryngology outpatient clinic of Dicle University Faculty of Medicine Hospitals between January 2021 and December 2021 with the complaint of neck mass. A commercially available immunochromatographic lateral flow test (ICT) and a single-assay chemiluminescence test (CHT) were used to detect F.tularensis antibodies. Rose-Bengal test was performed on all sera to determine cross-reactions with antibodies produced in brucellosis. Brucella immunocapture agglutination tests (BCT) were performed on the sera of patients with positive screening tests. Results: The ages of patients diagnosed with neck mass ranged between 14–70 years, with a mean age of 44.5±12.1 years. Sixty two (62%) of the patients were male, and 38 (38%) were female. When the test results were evaluated, two sera were positive for F.tularensis by both ICT and CHT methods. The first serum tests were negative for Brucella. The titer of the second serum in the chemiluminescence test was low positive. Conclusion: Tularemia should be considered in the differential diagnosis of patients presenting with neck mass complaints, especially in patients living in rural areas, and specific diagnostic tests should be performed. In addition, a more comprehensive seroprevalence study supported by molecular testing techniques to be conducted in Diyarbakır will provide clearer data on the extent to which tularemia affects our region and which subspecies is the causative agent.
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- 2023
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17. Circulating serogroups of Leptospira in swine from a 7-year study in France (2011–2017)
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Naudet, Jeanne, Crespin, Laurent, Cappelle, Julien, Kodjo, Angeli, and Ayral, Florence
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- 2022
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18. Investigation of Descriptive Characteristics of Randomized Controlled Trials of COVID-19 Vaccines
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Elif Köse, Hasan Çetin Ekerbiçer, Alper Arslan, Arman Özaygın, Betül Nas, Beyza Yavuz, Büşranur Metin, Elif Şahin, Emine Nuran Keske, Hande Çelik, Kadir Özkan, Melike Kutlu, Merve Ayral, Merve Erdoğan, Neslihan Kılıç, Nilay Nur Önder, Özge Arıcı, Özge Bölükbaşoğlu, Sadeq Albishari, and Gökhan Oturak
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covid-19 vaccines ,randomized controlled trial ,vaccines ,pubmed ,Medicine - Abstract
INTRODUCTION: The aim of this study was to examine the descriptive characteristics of randomized controlled trials published in PubMed on COVID-19 vaccines until May 30, 2021. METHODS: Seventy three articles reached by scanning the keywords "vaccine" and "COVID 19" in the PubMed database were reviewed by researchers, 33 randomized controlled trials (RCTs) related to COVID 19 vaccines were included in the study. According to the 17-item questionnaire created by the researchers, the descriptive features of included studies were examined. RESULTS: The total number of investigative authors in 33 RCT articles published in approximately one and a half years from the outbreak of the pandemic was 946, and the average number of authors per article was 28.67+-18.56. 39.3% of the articles were published in The Lancet and 27.2% in The New England Journal of Medicine. Of the vaccines used in the studies, 36.3% mRNA vaccine, 21.2% Inactivated vaccine, 18.1% Recombinant adenovirus vaccine, 12.1% Chimpanzee adenovirus-based vector vaccine, 6% BCG vaccine. 22.5% of vaccines are Phase 1, 12.9% Phase 2, 19.3% Phase 3, 3.2% Phase 4, 32.3% Phase 1-2, 9%,6 of them are Phase 2-3 studies. DISCUSSION AND CONCLUSION: The majority of randomized controlled trials on COVID-19 vaccines are phase 1 and phase 2 trials for mRNA vaccines and inactivated vaccines. Studies have generally been conducted on the adult age group and studies are needed to evaluate the effect of vaccines on the pediatric age group. In studies, the safety of vaccines has been examined more, and there is limited information on efficacy and effectiveness of vaccines.
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- 2022
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19. Mesoporous SiC-Based Photocatalytic Membranes and Coatings for Water Treatment
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Karla Begonia Cervantes-Diaz, Martin Drobek, Anne Julbe, André Ayral, and Julien Cambedouzou
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silicon carbide ,mesoporous membrane ,photocatalysis ,membrane reactor ,Chemical technology ,TP1-1185 ,Chemical engineering ,TP155-156 - Abstract
Photocatalytically active silicon carbide (SiC)-based mesoporous layers (pore sizes between 5 and 30 nm) were synthesized from preceramic polymers (polymer-derived ceramic route) on the surface and inside the pores of conventional macroporous α-alumina supports. The hybrid membrane system obtained, coupling the separation and photocatalytical properties of SiC thin films, was characterized by different static and dynamic techniques, including gas and liquid permeation measurements. The photocatalytic activity was evaluated by considering the degradation efficiency of a model organic pollutant (methylene blue, MB) under UV light irradiation in both diffusion and permeation modes using SiC-coated macroporous supports. Specific degradation rates of 1.58 × 10−8 mol s−1 m−2 and 7.5 × 10−9 mol s−1 m−2 were obtained in diffusion and permeation modes, respectively. The performance of the new SiC/α-Al2O3 materials compares favorably to conventional TiO2-based photocatalytic membranes, taking advantage of the attractive physicochemical properties of SiC. The developed synthesis strategy yielded original photocatalytic SiC/α-Al2O3 composites with the possibility to couple the ultrafiltration SiC membrane top-layer with the SiC-functionalized (photocatalytic) macroporous support. Such SiC-based materials and their rational associations on porous supports offer promising potential for the development of efficient photocatalytic membrane reactors and contactors for the continuous treatment of polluted waters.
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- 2023
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20. Integrating Lecture and Laboratory Work for a Materials Chemistry Course to Engage and Motivate Students through Highly Visual and Intriguing Syntheses
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Molvinger, Karine, Ayral, Rose-Marie, and Filhol, Jean-Sébastien
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An original integrated course called "Chemistry: Magical Science" at Montpellier University (France) is presented. This approach mixes tutorials and practical work by using the pretext of high-tech materials synthesis to teach students knowledge, skills, and practical techniques. It also educates students about chemical risks and bibliographic research and trains them for oral presentations. The practical work is partly directed and partly autonomous. This work involves a description of this course and its evaluation.
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- 2020
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21. Identification of the contributing area to river discharge during low-flow periods
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M. Gillet, C. Le Gal La Salle, P. A. Ayral, S. Khaska, P. Martin, and P. Verdoux
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Technology ,Environmental technology. Sanitary engineering ,TD1-1066 ,Geography. Anthropology. Recreation ,Environmental sciences ,GE1-350 - Abstract
The increasing severity of hydrological droughts in the Mediterranean basin related to climate change raises the need to understand the processes sustaining low flow. The purpose of this paper is to evaluate simple mixing model approaches, first to identify and then to quantify streamflow contribution during low-water periods. An approach based on the coupling of geochemical data with hydrological data allows the quantification of flow contributions. In addition, monitoring during the low-water period was used to investigate the drying-up trajectory of each geological reservoir individually. Data were collected during the summers of 2018 and 2019 on a Mediterranean river (Gardon de Sainte-Croix). The identification of the end-members was performed after the identification of a groundwater geochemical signature clustered according to the geological nature of the reservoir. Two complementary methods validate further the characterisation: rock-leaching experiments and unsupervised classification (k-means). The use of the end-member mixture analysis (EMMA) coupled with a generalised likelihood uncertainty estimate (GLUE) (G-EMMA) mixing model coupled with hydrological monitoring of the main river discharge rate highlights major disparities in the contribution of the geological units, showing a reservoir with a minor contribution in high flow becoming preponderant during the low-flow period. This finding was revealed to be of the utmost importance for the management of water resources during the dry period.
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- 2021
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22. Density-Matrix Renormalization Group Algorithm for Simulating Quantum Circuits with a Finite Fidelity
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Thomas Ayral, Thibaud Louvet, Yiqing Zhou, Cyprien Lambert, E. Miles Stoudenmire, and Xavier Waintal
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Physics ,QC1-999 ,Computer software ,QA76.75-76.765 - Abstract
We develop a density-matrix renormalization group (DMRG) algorithm for the simulation of quantum circuits. This algorithm can be seen as the extension of the time-dependent DMRG from the usual situation of Hermitian Hamiltonian matrices to quantum circuits defined by unitary matrices. For small circuit depths, the technique is exact and equivalent to other matrix product state–based techniques. For larger depths, it becomes approximate in exchange for an exponential speed up in computational time. Like an actual quantum computer, the quality of the DMRG results is characterized by a finite fidelity. However, unlike a quantum computer, the fidelity depends strongly on the quantum circuit considered. For the most difficult possible circuit for this technique, the so-called “quantum supremacy” benchmark of Google LLC [Arute et al., Nature 574, 505 (2019)], we find that the DMRG algorithm can generate bit strings of the same quality as the seminal Google experiment on a single computing core. For a more structured circuit used for combinatorial optimization (quantum approximate optimization algorithm), we find a drastic improvement of the DMRG results with error rates dropping by a factor of 100 compared with random quantum circuits. Our results suggest that the current bottleneck of quantum computers is their fidelities rather than the number of qubits.
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- 2023
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23. Is carnosine effective to alleviate lung injury: a systematic review
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Yalaza Metin, Akin Irem, Altiner Seda, Aribal Ayral Pelin, and Yazihan Nuray
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carnosine ,lung ,lung injury ,respiratory diseases ,systematic review ,karnozin ,akciğer ,akciğer hasarı ,solunum hastalıkları ,sistematik derleme ,Biochemistry ,QD415-436 - Abstract
Lung injury is one of the most important risk factor for morbidity and mortality, especially in older people. There are several reasons causing acute lung injury (ALI) and acute respiratory distress syndrome (ARDS) such as pneumonia, sepsis, viruses, oxidants, and trauma. Evidence has shown that carnosine has many properties, such as suppressing hydroxyl, superoxide, and peroxyl radicals, inhibiting peroxidation, membrane protection and wound healing. We aimed to analyze the effects of carnosine on lung injury in this systematic review.
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- 2021
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24. Evaluation using latent class models of the diagnostic performances of three ELISA tests commercialized for the serological diagnosis of Coxiella burnetii infection in domestic ruminants
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Thibaut Lurier, Elodie Rousset, Patrick Gasqui, Carole Sala, Clément Claustre, David Abrial, Philippe Dufour, Renée de Crémoux, Kristel Gache, Marie Laure Delignette-Muller, Florence Ayral, and Elsa Jourdain
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Q fever ,Latent class model ,Bayesian ,Diagnostic accuracy ,Herd sensitivity ,Conditional dependence ,Veterinary medicine ,SF600-1100 - Abstract
Abstract ELISA methods are the diagnostic tools recommended for the serological diagnosis of Coxiella burnetii infection in ruminants but their respective diagnostic performances are difficult to assess because of the absence of a gold standard. This study focused on three commercial ELISA tests with the following objectives (1) assess their sensitivity and specificity in sheep, goats and cattle, (2) assess the between- and within-herd seroprevalence distribution in these species, accounting for diagnostic errors, and (3) estimate optimal sample sizes considering sensitivity and specificity at herd level. We comparatively tested 1413 cattle, 1474 goat and 1432 sheep serum samples collected in France. We analyzed the cross-classified test results with a hierarchical zero-inflated beta-binomial latent class model considering each herd as a population and conditional dependence as a fixed effect. Potential biases and coverage probabilities of the model were assessed by simulation. Conditional dependence for truly seropositive animals was high in all species for two of the three ELISA methods. Specificity estimates were high, ranging from 94.8% [92.1; 97.8] to 99.2% [98.5; 99.7], whereas sensitivity estimates were generally low, ranging from 39.3 [30.7; 47.0] to 90.5% [83.3; 93.8]. Between- and within-herd seroprevalence estimates varied greatly among geographic areas and herds. Overall, goats showed higher within-herd seroprevalence levels than sheep and cattle. The optimal sample size maximizing both herd sensitivity and herd specificity varied from 3 to at least 20 animals depending on the test and ruminant species. This study provides better interpretation of three widely used commercial ELISA tests and will make it possible to optimize their implementation in future studies. The methodology developed may likewise be applied to other human or animal diseases.
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- 2021
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25. A novel method based on unbiased correlations tests for covariate selection in nonlinear mixed effects models: The COSSAC approach
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Géraldine Ayral, Jean‐François Si Abdallah, Claude Magnard, and Jonathan Chauvin
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Therapeutics. Pharmacology ,RM1-950 - Abstract
Abstract Building a covariate model is a crucial task in population pharmacokinetics and pharmacodynamics in order to understand the determinants of the interindividual variability. Identifying a good covariate model usually requires many runs. Several procedures have been proposed in the past to automatize this task. The most commonly used is Stepwise Covariate Modeling (SCM). Here, we present a novel stepwise method based on statistical tests between individual parameters sampled from their conditional distribution and the covariates. This strategy, called the COnditional Sampling use for Stepwise Approach based on Correlation tests (COSSAC), makes use of the information contained in the current model to choose which parameter‐covariate relationship to try next. This strategy greatly reduces the number of covariate models tested, while retaining on its search path the models improving the log‐likelihood (LL). In this article, we detail the COSSAC method and its implementation in Monolix, and evaluate its performance. The performance was assessed by comparing COSSAC to the traditional SCM method on 17 representative data sets. For the large majority of cases (15 out of 17), the final covariate model is identical (11 cases) or very similar (4 cases with LL differences less than 3.84) with both procedures. Yet, COSSAC requires between 2 to 20 times fewer runs than SCM. This represents a decisive speed up, especially for models that take long to run and would not be tractable using the SCM method.
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- 2021
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26. Benchmarking Quantum Coprocessors in an Application-Centric, Hardware-Agnostic, and Scalable Way
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Simon Martiel, Thomas Ayral, and Cyril Allouche
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Combinatorial optimization ,quantum algorithms ,quantum benchmarking ,Atomic physics. Constitution and properties of matter ,QC170-197 ,Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
Existing protocols for benchmarking current quantum coprocessors fail to meet the usual standards for assessing the performance of high-performance-computing platforms. After a synthetic review of these protocols—whether at the gate, circuit, or application level—we introduce a new benchmark, dubbed Atos Q-score, which is application-centric, hardware-agnostic, and scalable to quantum advantage processor sizes and beyond. The Q-score measures the maximum number of qubits that can be used effectively to solve the MaxCut combinatorial optimization problem with the quantum approximate optimization algorithm. We give a robust definition of the notion of effective performance by introducing an improved approximation ratio based on the scaling of random and optimal algorithms. We illustrate the behavior of Q-score using perfect and noisy simulations of quantum processors. Finally, we provide an open-source implementation of Q-score that makes it easy to compute the Q-score of any quantum hardware.
- Published
- 2021
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27. Identification of Pathogenic Leptospira kirschneri Serogroup Grippotyphosa in Water Voles (Arvicola terrestris) from Ruminant Pastures in Puy-de-Dôme, Central France
- Author
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Elena Harran, Adrien Pinot, Angeli Kodjo, Zouheira Djelouadji, Marine Le Gudayer, Soro Sionfoungo Daouda, Karine Groud, Virginie Lattard, and Florence Ayral
- Subjects
leptospirosis ,water voles ,maintenance hosts ,reservoir ,diagnosis ,epidemiology ,Medicine - Abstract
Rodents are the primary reservoirs for pathogenic Leptospira species, which cause leptospirosis. Among the key potential carriers are water voles, whose population outbreaks can consequently pose a major threat to human and animal health. We studied the prevalence, prominence, and epidemiology of pathogenic Leptospira species in water voles in central France. First, 46 voles were captured, and DNA was extracted from kidney, lung, liver, blood, and urine and tested for the presence of Leptospira using three molecular methods: PCR, O-antigen typing, and variable number tandem repeat (VNTR) typing. We also attempted to culture leptospires from kidney and urine samples. In addition, we investigated leptospiral antibodies in serum samples from 60 sheep using microscopic agglutination testing. These animals co-occurred with the voles, so we sought to assess their degree of exposure and involvement in pathogen dynamics. The overall prevalence of infection was 76.1% (CI95% [61.2%, 87.4%]). The only strain found was L. kirschneri serogroup Grippotyphosa and a similar VNTR profile was acquired. Leptospires were successfully cultured from kidney and urine samples for four voles. Three sheep had low antibody titers against the Leptospira serogroup Grippotyphosa. Taken together, our results suggest the exclusive carriage of L. kirschneri serogroup Grippotyphosa among water voles in central France. Nevertheless, their ability to act as reservoir hosts that transmit the pathogen to co-occurring livestock remains unclear and merits further research.
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- 2023
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28. The Relationship Between Metabolic Syndrome Development and Tissue Trace Elements Status and Inflammatory Markers
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Akdas, Sevginur, Turan, Belma, Durak, Aysegul, Aribal Ayral, Pelin, and Yazihan, Nuray
- Published
- 2020
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29. Efficient Pharmacokinetic Modeling Workflow With the MonolixSuite: A Case Study of Remifentanil
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Pauline Traynard, Géraldine Ayral, Monika Twarogowska, and Jonathan Chauvin
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Therapeutics. Pharmacology ,RM1-950 - Abstract
MonolixSuite is a software widely used for model‐based drug development. It contains interconnected applications for data visualization, noncompartmental analysis, nonlinear mixed effect modeling, and clinical trial simulations. Its main assets are ease of use via an interactive graphical interface, computation speed, and efficient parameter estimation even for complex models. This tutorial presents a step‐by‐step pharmacokinetic (PK) modeling workflow using MonolixSuite, including how to visualize the data, set up a population PK model, estimate parameters, and diagnose and improve the model incrementally.
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- 2020
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30. Evaluation using latent class models of the diagnostic performances of three ELISA tests commercialized for the serological diagnosis of Coxiella burnetii infection in domestic ruminants
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Lurier, Thibaut, Rousset, Elodie, Gasqui, Patrick, Sala, Carole, Claustre, Clément, Abrial, David, Dufour, Philippe, de Crémoux, Renée, Gache, Kristel, Delignette-Muller, Marie Laure, Ayral, Florence, and Jourdain, Elsa
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- 2021
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31. Level of Certain Oxidants and Antioxidants in Patients with Uterine Fibroids
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Kadir Cetinkaya, Pelin Aribal Ayral, Semra Cetinkaya, Nuray Yazihan, Seyma Fadiloglu, Melahat Atasever, and Ozcan Erel
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antioxidants, oxidants, oxidative stress, pathophysiology, uterine fibroid ,Gynecology and obstetrics ,RG1-991 - Abstract
Objective: The mechanism of the leiomyoma formation process is still unknown. However, the menstrual cycle is associated with hypoxia, and ongoing hypoxia is associated with cellular events leading to the conversion of myometrial cells into uterine fibroids. After the hypoxic environment, the balance of cellular cytokines and growth factors changes. It was planned to evaluate the balance of oxidative agents and the role of oxidative stress in the formation of uterine fibroids. Study Design: The study was conducted in patients of gynecology outpatient clinic of Ankara Oncology Training and Research Hospital. Those volunteers with fibroids formed the study group, and the healthy ones were identified as the control group. A total of 64 subjects, 32 in both groups were included. The levels of catalase, ceruloplasmin, myeloperoxidase, native thiol, disulfide, and total thiol levels were investigated in groups. Results: Antioxidant parameters such as native thiol, disulfide, and total thiol levels were significantly decreased in uterine fibroid group. Catalase, ceruloplasmin, and myeloperoxidase levels were not statistically different between groups. Conclusion: Decrease in these antioxidant parameters showed that the hypoxia and the balance of oxidant and antioxidant substances changes may probably have associated with the pathophysiology of uterine fibroids.
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- 2019
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32. Epidemiology of Leptospirosis: The First Literature Review of the Neglected Disease in the Middle East
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Elena Harran, Christo Hilan, Zouheira Djelouadji, and Florence Ayral
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Leptospira ,one health ,diagnosis ,epidemiology ,middle eastern countries ,Medicine - Abstract
Leptospirosis is a major zoonotic disease that has emerged worldwide, and numerous studies performed in affected countries have provided epidemiological knowledge of the disease. However, currently, there is inadequate knowledge of leptospirosis in the Middle East. Therefore, we grouped publications from various Middle Eastern countries to acquire a general knowledge of the epidemiological situation of leptospirosis and provide an initial description of the leptospiral relative risk and circulating serogroups. We conducted a detailed literature search of existing studies describing Leptospira prevalence and seroprevalence in Middle Eastern countries. The search was performed using online PubMed and ScienceDirect databases. One hundred and one articles were included in this review. Some countries, including Iran, Turkey, and Egypt, reported more publications compared to others, such as Lebanon, Kuwait, and Saudi Arabia. Frequently, the seroprevalence of leptospirosis varied considerably between and within countries. The prevalence of leptospirosis was comparable in most Middle Eastern countries; however, it varied between some countries. The methods of detection also varied among studies, with the microscopic agglutination test used most commonly. Some hosts were more recurrent compared with others. This review summarizes the epidemiological situation of Leptospira infection in the Middle East, reporting predominant serogroups—Sejroe, Grippotyphosa, Icterohaemorrhagiae, Autumnalis, and Pomona—that were identified in the most commonly tested hosts. Our findings emphasize the need to develop a deeper understanding of the epidemiology of Leptospira spp. and prioritize the disease as a public health problem in this region. To achieve this goal, increased awareness is critical, and more publications related to the topic and following a standardized approach are needed.
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- 2022
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33. Quantum Divide and Compute: Exploring the Effect of Different Noise Sources
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Ayral, Thomas, Régent, François-Marie Le, Saleem, Zain, Alexeev, Yuri, and Suchara, Martin
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- 2021
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34. Recent progress on ceria doping and shaping strategies for solar thermochemical water and CO2 splitting cycles
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Anita Haeussler, Stéphane Abanades, Julien Jouannaux, Martin Drobek, André Ayral, and Anne Julbe
- Subjects
ceria ,oxygen vacancies ,redox reactions ,non-stoichiometric materials ,doping ,thermochemical cycles ,co2/h2o splitting ,hydrogen ,solar fuel ,Materials of engineering and construction. Mechanics of materials ,TA401-492 - Abstract
Thermochemical redox cycling for either water or CO2 splitting is a promising strategy to convert solar energy into clean fuels. Such splitting reaction can convert water and recycled CO2 into H2 and CO respectively, the building blocks for the preparation of various synthetic liquid fuels. Attractively, CO2 is valorized in this way and can be used as a carbon-neutral fuel. However, the efficiency of the solar thermochemical process has to be improved to achieve an economically viable fuel production. For this purpose, an optimization of the reactive materials regarding both their chemical activity and long-term stability is a key requirement. To date, ceria is considered as the benchmark material for thermochemical redox cycles. Indeed, it is able to maintain a single cubic fluorite phase during thermal cycling over a large range of oxygen non-stoichiometry and also provides thermodynamically favorable oxidation. However, it suffers from a high reduction temperature and a low reduction extent. Several doping strategies of ceria have been developed to increase its redox activity and long-term performance stability. This paper provides an overview of the efforts made to enhance the thermochemical performance of ceria by investigation of dopant incorporation and material shaping for designed morphologies and microstructures.
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- 2019
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35. Integrated high-resolution dataset of high-intensity European and Mediterranean flash floods
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W. Amponsah, P.-A. Ayral, B. Boudevillain, C. Bouvier, I. Braud, P. Brunet, G. Delrieu, J.-F. Didon-Lescot, E. Gaume, L. Lebouc, L. Marchi, F. Marra, E. Morin, G. Nord, O. Payrastre, D. Zoccatelli, and M. Borga
- Subjects
Environmental sciences ,GE1-350 ,Geology ,QE1-996.5 - Abstract
This paper describes an integrated, high-resolution dataset of hydro-meteorological variables (rainfall and discharge) concerning a number of high-intensity flash floods that occurred in Europe and in the Mediterranean region from 1991 to 2015. This type of dataset is rare in the scientific literature because flash floods are typically poorly observed hydrological extremes. Valuable features of the dataset (hereinafter referred to as the EuroMedeFF database) include (i) its coverage of varied hydro-climatic regions, ranging from Continental Europe through the Mediterranean to Arid climates, (ii) the high space–time resolution radar rainfall estimates, and (iii) the dense spatial sampling of the flood response, by observed hydrographs and/or flood peak estimates from post-flood surveys. Flash floods included in the database are selected based on the limited upstream catchment areas (up to 3000 km2), the limited storm durations (up to 2 days), and the unit peak flood magnitude. The EuroMedeFF database comprises 49 events that occurred in France, Israel, Italy, Romania, Germany and Slovenia, and constitutes a sample of rainfall and flood discharge extremes in different climates. The dataset may be of help to hydrologists as well as other scientific communities because it offers benchmark data for the identification and analysis of the hydro-meteorological causative processes, evaluation of flash flood hydrological models and for hydro-meteorological forecast systems. The dataset also provides a template for the analysis of the space–time variability of flash flood triggering rainfall fields and of the effects of their estimation on the flood response modelling. The dataset is made available to the public with the following DOI: https://doi.org/10.6096/MISTRALS-HyMeX.1493.
- Published
- 2018
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36. Sol–gel-derived multifunctional nanoporous ceramic membranes
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AYRAL, André
- Published
- 2019
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37. A Subtle Symmetry of Lebesgue’s Measure
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Uludağ, Muhammed and Ayral, Hakan
- Published
- 2019
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38. Muskrats are greater carriers of pathogenic Leptospira than coypus in ecosystems with temperate climates.
- Author
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Florence Ayral, Angeli Kodjo, Gérald Guédon, Franck Boué, and Céline Richomme
- Subjects
Medicine ,Science - Abstract
Knowledge on the possible sources of human leptospirosis, other than rats, is currently lacking. To assess the distribution pattern of exposure and infection by Leptospira serogroups in the two main semi-aquatic rodents of Western France, coypus (Myocastor coypus) and muskrats (Ondatra zibethicus), results of micro-agglutination testing and renal tissue PCR were used. In coypus, the apparent prevalence was 11% (n = 524, CI95% = [9% - 14%]), seroprevalence was 42% (n = 590, CI95% = [38% - 46%]), and the predominant serogroup was Australis (84%). In muskrats, the apparent prevalence was 33% (n = 274, CI95% = [27% - 39%]), seroprevalence was 57% (n = 305, CI95% = [52% - 63%]), and the predominant serogroup was Grippotyphosa (47%). Muskrats should therefore be considered an important source of Grippotyphosa infection in humans and domestic animals exposed in this part of France.
- Published
- 2020
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39. Management of Urban Waters with Nature-Based Solutions in Circular Cities—Exemplified through Seven Urban Circularity Challenges
- Author
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Hasan Volkan Oral, Matej Radinja, Anacleto Rizzo, Katharina Kearney, Theis Raaschou Andersen, Pawel Krzeminski, Gianluigi Buttiglieri, Derya Ayral-Cinar, Joaquim Comas, Magdalena Gajewska, Marco Hartl, David C. Finger, Jan K. Kazak, Harri Mattila, Patrícia Vieira, Patrizia Piro, Stefania Anna Palermo, Michele Turco, Behrouz Pirouz, Alexandros Stefanakis, Martin Regelsberger, Nadia Ursino, and Pedro N. Carvalho
- Subjects
blue-green infrastructure ,climate change and mitigation ,sustainable water management ,urban circularity challenges ,water reuse ,Hydraulic engineering ,TC1-978 ,Water supply for domestic and industrial purposes ,TD201-500 - Abstract
Nature-Based Solutions (NBS) have been proven to effectively mitigate and solve resource depletion and climate-related challenges in urban areas. The COST (Cooperation in Science and Technology) Action CA17133 entitled “Implementing nature-based solutions (NBS) for building a resourceful circular city” has established seven urban circularity challenges (UCC) that can be addressed effectively with NBS. This paper presents the outcomes of five elucidation workshops with more than 20 European experts from different backgrounds. These international workshops were used to examine the effectiveness of NBS to address UCC and foster NBS implementation towards circular urban water management. A major outcome was the identification of the two most relevant challenges for water resources in urban areas: ‘Restoring and maintaining the water cycle’ (UCC1) and ‘Water and waste treatment, recovery, and reuse’ (UCC2). s Moreover, significant synergies with ‘Nutrient recovery and reuse’, ‘Material recovery and reuse’, ‘Food and biomass production’, ‘Energy efficiency and recovery’, and ‘Building system recovery’ were identified. Additionally, the paper presents real-life case studies to demonstrate how different NBS and supporting units can contribute to the UCC. Finally, a case-based semi-quantitative assessment of the presented NBS was performed. Most notably, this paper identifies the most typically employed NBS that enable processes for UCC1 and UCC2. While current consensus is well established by experts in individual NBS, we presently highlight the potential to address UCC by combining different NBS and synergize enabling processes. This study presents a new paradigm and aims to enhance awareness on the ability of NBS to solve multiple urban circularity issues.
- Published
- 2021
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40. Comparison of Radiological and Surgical Findings in Patients with Chronic suppurative Otitis Media
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Nazim Bozan, Burcu Fidan, Özlem Tiren, Ayşe Arslan, Pınar Kundi, Hüseyin Özkan, Abdurrahman Ayral, Semra Ağırbaş, Harun Arslan, Abdussamet Batur, Mahfuz Turan, and Ahmet Faruk Kıroğlu
- Subjects
chronic otitis media ,computed tomography ,tympanomastoidectomy ,Medicine - Abstract
INTRODUCTION: To retrospectively evaluate the data of patients with chronic suppurative otitis media (CSOM) who were operated and who also had routine preoperative temporal bone computed tomography (CT) inorder to determine the role of preoperative CT in CSOM surgery. METHODS: Preoperative CT results and intraoperative data of 42 patients with chronic suppurative otitis media were retrospectively evaluated. RESULTS: Cholesteatoma was determined in 23 cases (54.76%) during operation and in 21 of those cases cholesteatoma presence was reported in preoperative CT evaluations. CT evaluation had a 91.30% (confidence interval (CI): 71.96%-98.93%) sensitivity and 78.95% (CI: 54.43%-93.95%) specificity regarding determination of cholesteatoma. Intraoperative ossicular chain destruction was reported in 32 (76.19%) patients and in 27 of them, CT reported ossicular chain destruction. CT evaluation had a 84.38% (CI: 67.21%-98.93%) sensitivity and 80% (CI: 44.39%-97.48%) specificity regarding determination of ossicular chain destruction. DISCUSSION AND CONCLUSION: We believe that, preoperative CT provides important data in surgical management of CSOM and for that reason all patients should be evaluated with CT in preoperative period.
- Published
- 2017
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41. Inverse modeling of soil water content to estimate the hydraulic properties of a shallow soil and the associated weathered bedrock
- Author
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Le Bourgeois, O., Bouvier, C., Brunet, P., and Ayral, P.-A.
- Published
- 2016
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42. Hierarchical Porosity Tailoring of Sol–Gel Derived Pt/SiO2 Catalysts
- Author
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Sierra-Salazar, Andrés Felipe, Ayral, André, Chave, Tony, Hulea, Vasile, Nikitenko, Sergey I., Perathoner, Siglinda, and Lacroix-Desmazes, Patrick
- Published
- 2018
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43. Mapping topsoil field-saturated hydraulic conductivity from point measurements using different methods
- Author
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Braud Isabelle, Desprats Jean-François, Ayral Pierre-Alain, Bouvier Christophe, and Vandervaere Jean-Pierre
- Subjects
infiltration methods ,topsoil field-saturated hydraulic conductivity ,land cover ,geology ,mapping ,Hydraulic engineering ,TC1-978 - Abstract
Topsoil field-saturated hydraulic conductivity, Kfs, is a parameter that controls the partition of rainfall between infiltration and runoff and is a key parameter in most distributed hydrological models. There is a mismatch between the scale of local in situ Kfs measurements and the scale at which the parameter is required in models for regional mapping. Therefore methods for extrapolating local Kfs values to larger mapping units are required. The paper explores the feasibility of mapping Kfs in the Cévennes-Vivarais region, in south-east France, using more easily available GIS data concerning geology and land cover. Our analysis makes uses of a data set from infiltration measurements performed in the area and its vicinity for more than ten years. The data set is composed of Kfs derived from infiltration measurements performed using various methods: Guelph permeameters, double ring and single ring infiltrotrometers and tension infiltrometers. The different methods resulted in a large variation in Kfs up to several orders of magnitude. A method is proposed to pool the data from the different infiltration methods to create an equivalent set of Kfs. Statistical tests showed significant differences in Kfs distributions in function of different geological formations and land cover. Thus the mapping of Kfs at regional scale was based on geological formations and land cover. This map was compared to a map based on the Rawls and Brakensiek (RB) pedotransfer function (mainly based on texture) and the two maps showed very different patterns. The RB values did not fit observed equivalent Kfs at the local scale, highlighting that soil texture alone is not a good predictor of Kfs.
- Published
- 2017
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44. Laryngectomy: what is the impact of the type of surgery on life quality and sexual function?
- Author
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F. Akil, U. Yollu, S.F. Toprak, and M. Ayral
- Subjects
Otorhinolaryngology ,RF1-547 - Abstract
Lo scopo del presente studio è stato quello di confrontare gli effetti della laringectomia totale e della laringetomia parziale sulla qualità di vita e sulla sessualità. Lo studio ha incluso 31 pazienti affetti da carcinoma laringeo sottoposti a laringectomia parziale (Gruppo 1) e 51 pazienti sottoposti a laringectomia totale (Gruppo 2). Ai pazienti sono stati somministrati i questionari dedicati dell EORTC (QLQ-H&N35) e lArizona Sexual Experiences Scale (ASEX). I risultati del test EORTC QLQ-H&N35 relativamente alle sezioni HNSW (deglutizione), HNSE (sensi), HNSP (voce), HNSO (alimentazione sociale), HNSX (sessualità), HNTE (problematiche coi denti), HNOM (problemi nellapertura della bocca) e HNCO (tosse) sono risultati significativamente più alti per il gruppo 2. Tuttavia il test Arizona non ha mostrato differenze significative fra i due gruppi.
- Published
- 2017
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45. Effect of Euthyroid Nodular Goiter on Anxiety and Depression
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Ferit Akıl, Ahmet Üzer, Akif Deniz, Muhammed Ayral, Serkan Dedeoğlu, Eşref Araç, Mehmet Güven, and Ayhan Kaydu
- Subjects
euthyroid nodular goiter ,anxiety ,depression ,Medicine - Abstract
INTRODUCTION: The aim of this study was to evaluate the effect of the euthyroid nodular gouiter on the anxiety and depression. METHODS: 50 male and 50 female patients between ages of 18-50 who diagnosed euthyroid nodular gouiter at least 6 months were included in our study (group 2). 20 male and 20 female healthy patients were included as control group (group 1). The patients who had psychiatric problems and chronic comorbidities were excluded. The BDS ( Beck Depression scale) and BAS (Beck anxiety scale) tests were used as compasion of two groups. Student's T-test was performed for parametric data A p level of
- Published
- 2017
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46. The Anatomical Relationship Between Recurrent Laryngeal Nerve and First Tracheal Ring in Males and Females
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Ferit Akil, Umur Yollu, Muhammed Ayral, Faith Turgut, and Murat Yener
- Subjects
Recurrent Laryngeal Nerve ,Thyroidectomy ,Intraoperative Complications ,Trachea ,Anatomy ,Medicine ,Otorhinolaryngology ,RF1-547 - Abstract
Objectives Despite the modern advances in thyroid surgery, recurrent laryngeal nerve (rln) paralysis is still a critical problem. In order to decrease the rate of this complication, rln anatomy has been studied intensively. In our study, we aimed to recognize the relationship of rln and landmarks of the first tracheal ring. Methods Eighty-six female and 18 male patients who were undergone total thyroidectomy were included in this study. Trachea vertical height (tvh), right recurrent laryngeal nerve height (rrh), left recurrent laryngeal nerve height (lrh), right recurrent laryngeal nerve to trachea anterior face median raphe distance (rrd), left recurrent laryngeal nerve to trachea anterior face median raphe distance (lrd), right recurrent laryngeal nerve respect to trachea ratio (rrtr), and left recurrent laryngeal nerve respect to trachea ratio (lrtr) parameters of all patients were measured and compared in males and females using independent t-test and measurements on both right and left sides were compared statistically without sex discrimination. Results There were no significant differences between groups in tvh, rrh, rrd, lrd, rrtr, and lrtr parameters. Lrh parameter was significantly higher in males than in females (P
- Published
- 2017
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47. Voxel-Based Statistical Analysis of 3D Immunostained Tissue Imaging
- Author
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Michel E. Vandenberghe, Nicolas Souedet, Anne-Sophie Hérard, Anne-Marie Ayral, Florent Letronne, Yaël Balbastre, Elmahdi Sadouni, Philippe Hantraye, Marc Dhenain, Frédérique Frouin, Jean-Charles Lambert, and Thierry Delzescaux
- Subjects
voxel-based ,3D ,immunohistochemistry ,microscopy ,rodent ,Alzheimer's disease ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Recently developed techniques to visualize immunostained tissues in 3D and in large samples have expanded the scope of microscopic investigations at the level of the whole brain. Here, we propose to adapt voxel-based statistical analysis to 3D high-resolution images of the immunostained rodent brain. The proposed approach was first validated with a simulation dataset with known cluster locations. Then, it was applied to characterize the effect of ADAM30, a gene involved in the metabolism of the amyloid precursor protein, in a mouse model of Alzheimer's disease. This work introduces voxel-based analysis of 3D immunostained microscopic brain images and, therefore, opens the door to localized whole-brain exploratory investigation of pathological markers and cellular alterations.
- Published
- 2018
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48. ADAM30 Downregulates APP-Linked Defects Through Cathepsin D Activation in Alzheimer's Disease
- Author
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Florent Letronne, Geoffroy Laumet, Anne-Marie Ayral, Julien Chapuis, Florie Demiautte, Mathias Laga, Michel E. Vandenberghe, Nicolas Malmanche, Florence Leroux, Fanny Eysert, Yoann Sottejeau, Linda Chami, Amandine Flaig, Charlotte Bauer, Pierre Dourlen, Marie Lesaffre, Charlotte Delay, Ludovic Huot, Julie Dumont, Elisabeth Werkmeister, Franck Lafont, Tiago Mendes, Franck Hansmannel, Bart Dermaut, Benoit Deprez, Anne-Sophie Hérard, Marc Dhenain, Nicolas Souedet, Florence Pasquier, David Tulasne, Claudine Berr, Jean-Jacques Hauw, Yves Lemoine, Philippe Amouyel, David Mann, Rebecca Déprez, Frédéric Checler, David Hot, Thierry Delzescaux, Kris Gevaert, and Jean-Charles Lambert
- Subjects
Alzheimer ,APP ,ADAM30 ,Amyloid ,Metabolism ,LTP ,Medicine ,Medicine (General) ,R5-920 - Abstract
Although several ADAMs (A disintegrin-like and metalloproteases) have been shown to contribute to the amyloid precursor protein (APP) metabolism, the full spectrum of metalloproteases involved in this metabolism remains to be established. Transcriptomic analyses centred on metalloprotease genes unraveled a 50% decrease in ADAM30 expression that inversely correlates with amyloid load in Alzheimer's disease brains. Accordingly, in vitro down- or up-regulation of ADAM30 expression triggered an increase/decrease in Aβ peptides levels whereas expression of a biologically inactive ADAM30 (ADAM30mut) did not affect Aβ secretion. Proteomics/cell-based experiments showed that ADAM30-dependent regulation of APP metabolism required both cathepsin D (CTSD) activation and APP sorting to lysosomes. Accordingly, in Alzheimer-like transgenic mice, neuronal ADAM30 over-expression lowered Aβ42 secretion in neuron primary cultures, soluble Aβ42 and amyloid plaque load levels in the brain and concomitantly enhanced CTSD activity and finally rescued long term potentiation alterations. Our data thus indicate that lowering ADAM30 expression may favor Aβ production, thereby contributing to Alzheimer's disease development.
- Published
- 2016
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49. Genome-wide, high-content siRNA screening identifies the Alzheimer’s genetic risk factor FERMT2 as a major modulator of APP metabolism
- Author
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Chapuis, Julien, Flaig, Amandine, Grenier-Boley, Benjamin, Eysert, Fanny, Pottiez, Virginie, Deloison, Gaspard, Vandeputte, Alexandre, Ayral, Anne-Marie, Mendes, Tiago, Desai, Shruti, Goate, Alison M., Kauwe, John S. K., Leroux, Florence, Herledan, Adrien, Demiautte, Florie, Bauer, Charlotte, Checler, Fréderic, Petersen, Ronald C., Blennow, Kaj, Zetterberg, Henrik, Minthon, Lennart, Van Deerlin, Vivianna M., Lee, Virginia Man-Yee, Shaw, Leslie M., Trojanowski, John Q., Albert, Marilyn, Moghekar, Abhay, O’Brien, Richard, Peskind, Elaine R., Malmanche, Nicolas, Schellenberg, Gerard D., Dourlen, Pierre, Song, Ok-Ryul, Cruchaga, Carlos, Amouyel, Philippe, Deprez, Benoit, Brodin, Priscille, Lambert, Jean-Charles, and ADGC, Alzheimer’s Disease Neuroimaging Initiative
- Published
- 2017
- Full Text
- View/download PDF
50. Dehydration of 2,3-Butanediol: A Catalytical and Theoretical Approach
- Author
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Thome, Andreas Georg, Ayral, Nils, Toufar, Helge, Klüner, Thorsten, and Roessner, Frank
- Published
- 2017
- Full Text
- View/download PDF
Catalog
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