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CO2 fixation plays a key role to make biobased production cost competitive. Here, we use 3-hydroxypropionic acid (3-HP) to showcase how CO2 fixation enables approaching theoretical-yield production. Using genome-scale metabolic models to calculate the production envelope, we demonstrate that the provision of bicarbonate, formed from CO2, restricts previous attempts for high yield production of 3-HP. We thus develop multiple strategies for bicarbonate uptake, including the identification of Sul1 as a potential bicarbonate transporter, domain swapping of malonyl-CoA reductase, identification of Esbp6 as a potential 3-HP exporter, and deletion of Uga1 to prevent 3-HP degradation. The combined rational engineering increases 3-HP production from 0.14 g/L to 11.25 g/L in shake flask using 20 g/L glucose, approaching the maximum theoretical yield with concurrent biomass formation. The engineered yeast forms the basis for commercialization of bio-acrylic acid, while our CO2 fixation strategies pave the way for CO2 being used as the sole carbon source. CO2 fixation plays an important role to make bioproduction cost competitive. Here, the authors take 3-hydroxypropionic acid as an example to showcase how to achieve high carbon yield production through increasing the accessible bicarbonate, minimizing native CO2 release and avoiding carbon waste. [ABSTRACT FROM AUTHOR]

Parkinson's disease (PD) is a chronic neurodegenerative disorder characterized by dopaminergic neuron loss, which is related to excessive reactive oxygen species (ROS) accumulation. Endogenous peroxiredoxin-2 (Prdx-2) has potent anti-oxidative and anti-apoptotic effects. Proteomics studies revealed plasma levels of Prdx-2 were significantly lower in PD patients than in healthy individuals. For further study of the activation of Prdx-2 and its role in vitro, SH-SY5Y cells and the neurotoxin 1-methyl-4-phenylpyridinium (MPP+) were used to model PD. ROS content, mitochondrial membrane potential, and cell viability were used to assess the effect of MPP+ in SH-SY5Y cells. JC-1 staining was used to determine mitochondrial membrane potential. ROS content was detected using a DCFH-DA kit. Cell viability was measured using the Cell Counting Kit-8 assay. Western blot detected the protein levels of tyrosine hydroxylase (TH), Prdx-2, silent information regulator of transcription 1 (SIRT1), Bax, and Bcl-2. The results showed that MPP+-induced accumulation of ROS, depolarization of mitochondrial membrane potential, and reduction of cell viability occurred in SH-SY5Y cells. In addition, the levels of TH, Prdx-2, and SIRT1 decreased, while the ratios of Bax and Bcl-2 increased. Then, Prdx-2 overexpression in SH-SY5Y cells showed significant protection against MPP+ -induced neuronal toxicity, as evidenced by the decrease in ROS content, increase in cell viability, increase in the level of TH, and decrease in the ratios of Bax and Bcl-2. Meanwhile, SIRT1 levels increase with the level of Prdx-2. This suggests that the protection of Prdx-2 may be related to SIRT1. In conclusion, this study indicated that overexpression of Prdx-2 reduces MPP+-induced toxicity in SH-SY5Y cells and may be mediated by SIRT1. [ABSTRACT FROM AUTHOR]

The growth status, root exudates, radial oxygen loss, and sewage purification effect of plants acclimated with sewage and cultured with a nutrient solution were studied by selecting Acorus gramineus Aiton, Pistia stratiotes L., and Eichhornia crassipes (Mart.) Solms with the same individual size. The results showed that the root oxygen secretion rate of the Acorus gramineus Aiton was higher in light and dark conditions. For a single plant species, the oxygen secretion rate under light conditions was much higher than that under dark conditions. The root oxygen secretion rate of Acorus gramineus Aiton was the highest (2.03 µmol O2/h/plant), followed by Pistia stratiotes L. (1.68 µmol O2/h/plant), and the root oxygen secretion rate of Eichhornia crassipes (Mart.) Solms was the lowest (1.15 µmol O2/h/plant). After a period of adaptation, plants showed strong removal effects on COD, NH3-N, TN, and TP. The removal intensity was in the order of Acorus gramineus Aiton > Pistia stratiotes L. > Eichhornia crassipes (Mart.) Solms; the higher the temperature, the bigger the removal rate. These results were consistent with Acorus gramineus Aiton's organic matter secretion and radial oxygen loss, which were better than those of Pistia stratiotes L. and Eichhornia crassipes (Mart.) Solms. Three kinds of plants had better COD removal effects in an acidic environment and better TP removal effects in an alkaline environment. The results show that using the Acorus gramineus Aiton can achieve better remediation of polluted water bodies. [ABSTRACT FROM AUTHOR]

In this study, a modified horizontal settling tank with rotating biological discs was developed to treat slightly polluted surface water, and its performance on the simultaneous removal of turbidity, organics, and NH 4 + -N was investigated on a lab scale. Results show that the effluent quality of the modified settling tank is stable in more than two months of continuous operation. At a hydraulic retention time (HRT) of 2.0 h, 73.65 ± 5.15% turbidity, 53.98 ± 5.17% TOC, and 77.01 ± 10.02%, NH 4 + -N could be removed by the modified settling tank with an average of 1.96 NTU turbidity, 1.98 mg/L TOC, and 0.46 mg/L NH 4 + -N residue in the effluent. Due to the improvement in DO supply, higher removal efficiencies of both organics and NH 4 + -N were achieved with increased disc rotating speed (r < 4 r/min). Further study showed that the genus Hyphomicrobium dominant on the posterior discs and the genus Nitrospira dominant on the anterior discs mainly contributed to the enhanced bio-oxidation of organics and NH 4 + -N, respectively. [ABSTRACT FROM AUTHOR]

Large-scale fumaric acid chemical brownfield sites have posed a significant obstacle to environmental safety, public safety, and the redevelopment of brownfield sites. A comprehensive study was conducted to determine the main pollution indicators, soil pollution characteristics, and the multiple potential risks to the environment and the ecosystem of a fumaric acid brownfield site in northwestern China. The results showed that 1,2,3-trichloropropane(1,2,3-TCP) was the primary pollutant at the fumaric acid brownfield site. The atmospheric volatile organic compounds (VOCs) in this brownfield site did not exceed the Chinese standard limits. The soil contamination was more severe within the site, with a total of about 30 VOCs detected, including the uncommon brominated pollutants. The level of longitudinal soil contamination decreased with increasing soil depth. The distillation area was more contaminated with a maximum exceedance multiple of 11,291.8. The longitudinal contamination depths in the distillation and reactor zones were 10.0 m and 4.0 m, respectively. Soil texture and production processes are considered to be one of the influencing factors for the depth of vertical soil contamination. Our findings heighten the awareness of brownfield site soil contamination and provide a reference for contamination controls and the comprehensive management of fumaric acid brownfield sites. [ABSTRACT FROM AUTHOR]

Vitamin K epoxide reductases (VKORs) are a large family of integral membrane enzymes found from bacteria to humans. Human VKOR, specific target of warfarin, has both the epoxide and quinone reductase activity to maintain the vitamin K cycle. Bacterial VKOR homologs, however, are insensitive to warfarin inhibition and are quinone reductases incapable of epoxide reduction. What affords the epoxide reductase activity in human VKOR remains unknown. Here, we show that a representative bacterial VKOR homolog can be converted to an epoxide reductase that is also inhibitable by warfarin. To generate this new activity, we first substituted several regions surrounding the active site of bacterial VKOR by those from human VKOR based on comparison of their crystal structures. Subsequent systematic substitutions narrowed down to merely eight residues, with the addition of a membrane anchor domain, that are responsible for the epoxide reductase activity. Substitutions corresponding to N80 and Y139 in human VKOR provide strong hydrogen bonding interactions to facilitate the epoxide reduction. The rest of six substitutions increase the size and change the shape of the substrate‐binding pocket, and the membrane anchor domain stabilizes this pocket while allowing certain flexibility for optimal binding of the epoxide substrate. Overall, our study reveals the structural features of the epoxide reductase activity carried out by a subset of VKOR family in the membrane environment. [ABSTRACT FROM AUTHOR]

Arsenic (As) is among the most dangerous metalloids and is harmful to human wellbeing. In this laboratory study, Al(III)-modified kapok fibres (Al-Kapok) were used to remove As(V) from water. The sorbent was characterised using Fourier transform infrared spectroscopy (FT-IR) and scanning electron microscopy (SEM) combined with energy-dispersive X-ray spectroscopy (EDX). Batch experiments were performed to observe the performance of Al-Kapok in the removal of As(V) and to examine the effects of pH, temperature, adsorbent dose, and coexisting ions on the adsorption process. The surface of the sorbent changed after aluminium modification, and the results of the batch experiments showed that the adsorption of As(V) occurred mainly via endothermic-spontaneous chemisorption at the solution and solid interface of Al-Kapok. The As(V) removal efficiency was approximately 76%–84%, and it was slightly affected at pH levels below 8.0. Further study showed that the maximum adsorption capacity of Al-Kapok for As(V) was 118 μg/g at 30 °C and pH 6, and notable adverse effects were caused by the presence of SO 4 2 − and PO 4 3 − . It was also found that the boundary layer and film diffusion contributed more to As(V) adsorption. After five adsorption/desorption cycles, regeneration recovered approximately 92% of the adsorption capacity of Al-Kapok used. Overall, Al-Kapok appears to be a suitable adsorbent material for the purification of As-contaminated water. [Display omitted] • The adsorption of As(V) on the Al-Kapok is slightly affected by pH at pHs below 8.0 • As(V) adsorption is mainly a chemical process and inhibited by multi-valent anions. • Boundary layer and film diffusion shows more contribution to the adsorption of As(V). • 92% of the Al-Kapok's adsorption capacity could be recovered through regeneration. [ABSTRACT FROM AUTHOR]

More than 170 million individuals have been influenced by arsenic (As) because of the ingestion of As-polluted groundwater. The presence of As in water bodies, particularly groundwater, has been found to become a widespread issue in the past few decades. Because arsenic causes extreme wellbeing impacts, even at a low concentration in drinking water, the innovations of As removal from contaminated water are of significant importance. Traditional strategies, for example, reverse osmosis, ion exchange, and electro-dialysis are generally utilized for the remediation of As-polluted water; however, the high cost and/or sludge production restricts their application in less-developed areas. The utilization of adsorbents acquired from natural materials has been explored as an alternative for the costly techniques for As removal. This paper aims to review the past and current developments in using naturals adsorbents or modified natural materials for arsenic removal and show the different parameters, which may influence the As removal effectiveness of the natural adsorbent, such as contact time, adsorbent dosage, flow rate, pH, reusability, temperature, and influence of others ions. [ABSTRACT FROM AUTHOR]

Although many prokaryotes have glycolysis alternatives, it's considered as the only energy-generating glucose catabolic pathway in eukaryotes. Here, we managed to create a hybrid-glycolysis yeast. Subsequently, we identified an inositol pyrophosphatase encoded by OCA5 that could regulate glycolysis and respiration by adjusting 5-diphosphoinositol 1,2,3,4,6-pentakisphosphate (5-InsP 7) levels. 5-InsP 7 levels could regulate the expression of genes involved in glycolysis and respiration, representing a global mechanism that could sense ATP levels and regulate central carbon metabolism. The hybrid-glycolysis yeast did not produce ethanol during growth under excess glucose and could produce 2.68 g/L free fatty acids, which is the highest reported production in shake flask of Saccharomyces cerevisiae. This study demonstrated the significance of hybrid-glycolysis yeast and determined Oca5 as an inositol pyrophosphatase controlling the balance between glycolysis and respiration, which may shed light on the role of inositol pyrophosphates in regulating eukaryotic metabolism. [Display omitted] • Hybrid of glycolysis with the phosphoketolase pathway made an efficient cell factory • Oca5, identified as an inositol pyrophosphatase, degrading 5-InsP 7 to InsP 6 • InsPs control gene expression involved in glycolysis and respiration to balance fluxes • The mechanism of Oca5 regulating glycolysis and respiration was elaborated Glycolysis is considered as the only energy-generating glucose catabolic pathway in eukaryotes. Qin et al. establish a hybrid-glycolysis yeast that disrupts the Embden-Meyerhof-Parnas glycolysis pathway and introduced components of the phosphoketolase pathway. They further identify Oca5 as an inositol pyrophosphatase controlling the balance between glycolysis and respiration activities. [ABSTRACT FROM AUTHOR]

CO 2 fixation plays a key role to make biobased production cost competitive. Here, we use 3-hydroxypropionic acid (3-HP) to showcase how CO 2 fixation enables approaching theoretical-yield production. Using genome-scale metabolic models to calculate the production envelope, we demonstrate that the provision of bicarbonate, formed from CO 2 , restricts previous attempts for high yield production of 3-HP. We thus develop multiple strategies for bicarbonate uptake, including the identification of Sul1 as a potential bicarbonate transporter, domain swapping of malonyl-CoA reductase, identification of Esbp6 as a potential 3-HP exporter, and deletion of Uga1 to prevent 3-HP degradation. The combined rational engineering increases 3-HP production from 0.14 g/L to 11.25 g/L in shake flask using 20 g/L glucose, approaching the maximum theoretical yield with concurrent biomass formation. The engineered yeast forms the basis for commercialization of bio-acrylic acid, while our CO 2 fixation strategies pave the way for CO 2 being used as the sole carbon source., (© 2024. The Author(s).)