To determine the toxicity of 7 fungicides including prochloraz, difenoconazole, propiconazole, boscalid, myclobutanil, isopyrazam, and thiophanate-methyl against conidia of quinoa leaf spot pathogen(Alternaria alternate), and their morphological toxicology against conidia, the toxicity of 7 fungicides against growth of A. alternata mycelium was determined by mycelial growth rate method, and the toxicity and the effects of 7 fungicides on germination toxicity and germination morphology of conidia of A. alternata were determined and observed by hanging drop method. The results showed that the 7 fungicides had different toxicities against mycelial growth and conidial germination of A. alternata, and the toxicity against mycelial growth was as follows: prochloraz > difenoconazole > propiconazole > boscalid > myclobutanil > isopyrazam > thiophanate-methyl. The EC50 values ranged from 0.19 μg/mL to 245.45 μg/mL. Among them, prochloraz, difenoconazole, and propiconazole had the best antibacterial effect on mycelial growth of A. alternata at the highest concentration(2.5, 2.5, and 10.0 μg/mL, respectively), the inhibition rates were 78.9%, 81.4%, and 79.7%, respectively. The EC50 values were 0.19, 0.26, and 0.47 μg/ mL, respectively. The toxicity of the 7 fungicides against A. alternata conidia was as follows: isopyrazam > boscalid > propiconazole > myclobutanil > prochloraz > difenoconazole > thiophanate-methyl. Their EC50 values ranged from 0.21 μg/mL to 524.69 μg/mL. Among them, isopyrazam and boscalid had the best inhibition effect on A. alternata conidial germination, with inhibition rates of 76.9% and 84.0% at the highest concentration(1.0 μg/mL and 5.0 μg/mL, respectively). Their EC50 values were 0.21 μg/mL and 0.29 μg/mL, respectively. Morphological toxicology study showed that isopyrazam and boscalid could cause malformed germination of A. alternata conidia, which was characterized by enlargement of the germ tube tip and increased branching of the conidia. In conclusion, isopyrazam and boscalid could be used as protective agents to control the alternaria leaf spot of quinoa, and prochloraz, difenoconazole, and propiconazole could be used as therapeutic agents to control the alternaria leaf spot of quinoa. [ABSTRACT FROM AUTHOR]