71 results on '"LU, T."'
Search Results
2. Understanding the Unusual Response to High Pressure in KBe2BO3F2
- Author
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Yu, D. H., primary, Avdeev, M., additional, Sun, D. H., additional, Huston, L. Q., additional, Shiell, Thomas B., additional, Sun, Q. B., additional, Lu, T., additional, Gu, Q., additional, Liu, H., additional, Bradby, J. E., additional, Yie, N., additional, Liu, Y., additional, Wang, J. Y., additional, and McIntyre, G. J., additional
- Published
- 2017
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3. Density-controlled quantum Hall ferromagnetic transition in a two-dimensional hole system
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Lu, T. M., primary, Tracy, L. A., additional, Laroche, D., additional, Huang, S.-H., additional, Chuang, Y., additional, Su, Y.-H., additional, Li, J.-Y., additional, and Liu, C. W., additional
- Published
- 2017
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4. Generation of flower high-order Poincaré sphere laser beams from a spatial light modulator
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Lu, T. H., primary, Huang, T. D., additional, Wang, J. G., additional, Wang, L. W., additional, and Alfano, R. R., additional
- Published
- 2016
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5. High-mobility capacitively-induced two-dimensional electrons in a lateral superlattice potential
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Lu, T. M., primary, Laroche, D., additional, Huang, S.-H., additional, Chuang, Y., additional, Li, J.-Y., additional, and Liu, C. W., additional
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- 2016
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6. The up-regulation of SYNCRIP promotes the proliferation and tumorigenesis via DNMT3A/p16 in colorectal cancer.
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Li C, Lu T, Chen H, Yu Z, and Chen C
- Subjects
- Humans, Animals, Cell Line, Tumor, Cyclin-Dependent Kinase Inhibitor p16 metabolism, Cyclin-Dependent Kinase Inhibitor p16 genetics, Mice, Heterogeneous-Nuclear Ribonucleoproteins metabolism, Heterogeneous-Nuclear Ribonucleoproteins genetics, Cell Movement genetics, HCT116 Cells, Mice, Nude, Colorectal Neoplasms genetics, Colorectal Neoplasms pathology, Colorectal Neoplasms metabolism, DNA (Cytosine-5-)-Methyltransferases metabolism, DNA (Cytosine-5-)-Methyltransferases genetics, Cell Proliferation genetics, DNA Methyltransferase 3A metabolism, Gene Expression Regulation, Neoplastic, Carcinogenesis genetics, Up-Regulation
- Abstract
Heterogeneous nuclear ribonucleoproteins (hnRNPs), a group of proteins that control gene expression, have been implicated in many post-transcriptional processes. SYNCRIP (also known as hnRNP Q), a subtype of hnRNPs, has been reported to be involved in mRNA splicing and translation. In addition, the deregulation of SYNCRIP was found in colorectal cancer (CRC). However, the role of SYNCRIP in regulating CRC growth remains largely unknown. Here, we found that SYNCRIP was highly expressed in colorectal cancer by analyzing TCGA and GEPIA database. Furthermore, we confirmed the expression of SYNCRIP expression in CRC tumor and CRC cell lines. Functionally, SYNCRIP depletion using shRNA in CRC cell lines (SW480 and HCT 116) resulted in increased caspase3/7 activity and decreased cell proliferation, as well as migration. Meanwhile, overexpression of SYNCRIP showed opposite results. Mechanistically, SYNCRIP regulated the expression of DNA methyltransferases (DNMT) 3A, but not DNMT1 or DNMT3B, which affected the expression of tumor suppressor, p16. More importantly, our in vivo experiments showed that SYNCRIP depletion significantly inhibited colorectal tumor growth. Taken all together, our results suggest SYNCRIP as a potent therapeutic target in colorectal cancer., (© 2024. The Author(s).)
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- 2024
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7. An efficient blockchain-based framework for file sharing.
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Peng W, Lu T, Peng W, and Wang Z
- Abstract
File sharing, being the foundation of the Internet, has traditionally relied on a centralized service architecture resulting in significant maintenance costs. Moreover, due to the lack of an effective file management system, instances of sensitive information going out of control and loss of confidentiality in file sharing have occurred frequently. In order to address the difficulty of tamper detection and the lack of supervision in the entire process of file transfer in the current Internet environment, this paper designs a blockchain-based system architecture for secure sharing of electronic documents. An efficient blockchain model is used in our framework, and with the help of distributed storage system and asymmetric encryption technology, file sharing can be controlled, reliable and traceable in the transfer process. Referring to existing consensus mechanisms, e.g., Delegated Proof of Stake (DPoS) and Practical Byzantine Fault Tolerance (PBFT), we propose a new consensus for efficient and secure file sharing. Our experimental results show that our framework can maintain a higher throughput than existing schemes., (© 2024. The Author(s).)
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- 2024
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8. Demographic and clinical data of patients with spinal epidural angiolipomas.
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Lu T, Wang H, Liu Y, Qin X, Teng Y, and Wang Y
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- Humans, Male, Female, Middle Aged, Retrospective Studies, Adult, Epidural Neoplasms epidemiology, Epidural Neoplasms pathology, Epidural Neoplasms surgery, Aged, Spinal Neoplasms epidemiology, Spinal Neoplasms pathology, Spinal Neoplasms diagnostic imaging, Magnetic Resonance Imaging, SEER Program, Angiolipoma pathology, Angiolipoma epidemiology, Angiolipoma surgery
- Abstract
Spinal epidural angiolipomas are rare, benign, mesenchymal tumors. It remains unclear whether spinal epidural angiolipomas are genuinely rare or merely underreported. Herein, we assessed the demographic and clinical characteristics of patients with spinal epidural angiolipoma. We collected data from patients with spinal epidural angiolipoma from three sources. First, we retrospectively analyzed data from patients diagnosed with spinal epidural angiolipoma in our hospital between January 1, 2014, and December 31, 2023. Second, we performed a literature review of studies retrieved from PubMed. Third, we retrieved detailed data of patients with spinal angiolipoma from the Surveillance, Epidemiology, and End Results (SEER) database. We conducted a descriptive analysis to investigate the demographic and clinical characteristics of patients with spinal epidural angiolipoma. At our institution, three patients were diagnosed with spinal epidural angiolipoma. Additionally, we identified 116 patients from the literature review and 15 patients from the SEER database. We reviewed the treatment history and imaging features of the three patients from our institution. The descriptive analysis of the data collected from the literature review was consistent with previous reports. For example, 63.0% of lesions were located at the thoracic level. 31.9% of these lesions involved two vertebral bodies, while 75.6% involved 2-4 vertebral bodies. The most common symptoms experienced by patients were back pain, paraparesis, and numbness in the legs. Surgery was the primary treatment option for most patients, and complete tumor resection was achieved in the majority of patients. The male:female ratio was 1:1.4, the median age at diagnosis for the patients from the literature was 49 years old, and the median follow-up was 24 months. Notably, most of the reports came from Asia and there were few reports from Africa. The findings from the SEER database indicated a male:female ratio of 2:1. The peak incidence, which is typically reported in the fifth decade of life, was not observed. We presented three cases of spinal epidural angiolipoma and supplemented our findings with a literature review and population-based analysis according to the SEER database for the United States population. We believe that our research will enhance clinicians' comprehension of this uncommon tumor., (© 2024. The Author(s).)
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- 2024
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9. Metagenomic and culture-dependent analysis of Rhinopithecius bieti gut microbiota and characterization of a novel genus of Sphingobacteriaceae.
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Wang Q, Zhan PC, Han XL, and Lu T
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- Animals, Bacteroidetes genetics, Bacteroidetes isolation & purification, Bacteroidetes classification, Gastrointestinal Microbiome genetics, Phylogeny, Metagenomics methods, RNA, Ribosomal, 16S genetics
- Abstract
Culture-dependent and metagenomic binning techniques were employed to gain an insight into the diversification of gut bacteria in Rhinopithecius bieti, a highly endangered primate endemic to China. Our analyses revealed that Bacillota_A and Bacteroidota were the dominant phyla. These two phyla species are rich in carbohydrate active enzymes, which could provide nutrients and energy for their own or hosts' survival under different circumstances. Among the culturable bacteria, one novel bacterium, designated as WQ 2009
T , formed a distinct branch that had a low similarity to the known species in the family Sphingobacteriaceae, based on the phylogenetic analysis of its 16S rRNA gene sequence or phylogenomic analysis. The ANI, dDDH and AAI values between WQ 2009T and its most closely related strains S. kitahiroshimense 10CT , S. pakistanense NCCP-246T and S. faecium DSM 11690T were significantly lower than the accepted cut-off values for microbial species delineation. All results demonstrated that WQ 2009T represent a novel genus, for which names Rhinopithecimicrobium gen. nov. and Rhinopithecimicrobium faecis sp. nov. (Type strain WQ 2009T = CCTCC AA 2021153T = KCTC 82941T ) are proposed., (© 2024. The Author(s).)- Published
- 2024
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10. Response of upper tropospheric water vapor to global warming and ENSO.
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Li L, Chen Z, Wang B, Fan J, Lu T, and Lv K
- Abstract
The upper tropospheric water vapor is a key component of Earth's climate. Understanding variations in upper tropospheric water vapor and identifying its influencing factors is crucial for enhancing our comprehension of global climate change. While many studies have shown the impact of El Niño-Southern Oscillation (ENSO) and global warming on water vapor, how they affect the upper tropospheric water vapor remains unclear. Long-term, high-precision ERA5 specific humidity data from the European Centre for Medium-Range Weather Forecasts (ECMWF) provided the data foundation for this study. On this basis, we successfully obtained the patterns of global warming (Independent Component 1, IC1) and ENSO (Independent Component 2, IC2) by employing the strategy of independent component analysis (ICA) combined with non-parametric optimal dimension selection to investigate the upper tropospheric water vapor variations and responses to ENSO and global warming. The results indicate that global warming and ENSO are the primary factors contributing to water vapor variations in the upper troposphere, achieving the significant correlations of 0.87 and 0.61 with water vapor anomalies respectively. Together, they account for 86% of the global interannual variations in water vapor. Consistent with previous studies, our findings also find positive anomalies in upper tropospheric water vapor during El Niño years and negative anomalies during La Niña years. Moreover, the influence extent of ENSO on upper tropospheric water vapor varies with the changing seasons., (© 2024. The Author(s).)
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- 2024
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11. Identification of EMT-associated prognostic features among grade II/III gliomas.
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Yang W, Lin L, Lu T, Yu H, and Zhang S
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- Humans, Prognosis, Epithelial-Mesenchymal Transition genetics, Laminin, Brain Neoplasms pathology, Glioma pathology
- Abstract
Grade II/III gliomas have a highly heterogeneous clinical course. Identifying prognostic biomarkers in grade II/III gliomas is essential to guide clinical management. We explored epithelial-mesenchymal transition (EMT)-related genes to uncover prognostic features in grade II/III gliomas. Consensus cluster analysis of 200 EMT-related genes classified 512 grade II/III glioma samples into two molecular subtypes, C1 and C2. The C1 subtype had significantly worse overall survival compared to the C2 subtype. Pathway analysis revealed C1 tumors were highly associated with tumor progression pathways and demonstrated higher immune cell infiltration scores. Differential expression analysis identified four genes (ACTN1, AQP1, LAMC3, NRM) that discriminated the two subtypes. Validation in external datasets confirmed that high expression of this four-gene signature predicted poor prognosis in grade II/III gliomas. Cellular experiments showed ACTN1, AQP1 and NRM promoted glioma cell proliferation, migration and invasion. We examined correlations of the signature genes with T cell exhaustion markers and found ACTN1 expression had the strongest association. Immunohistochemistry analysis further demonstrated that ACTN1 protein expression in grade II/III gliomas was negatively correlated with patient overall survival. In summary, our study identified a concise four-gene signature that robustly predicts grade II/III gliomas prognosis across multiple datasets. The signature provides clinical relevance in distinguishing more aggressive grade II/III glioma tumors. Targeting the ACTN1, AQP1 and NRM genes may offer new therapeutic opportunities to improve grade II/III gliomas patient outcomes., (© 2024. The Author(s).)
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- 2024
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12. Three-dimensional analysis of hard and soft tissue changes in skeletal class II patients with high mandibular plane angle undergoing surgery.
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Zhang C, Lu T, Wang L, Wen J, Huang Z, Lin S, Zhou Y, Li G, and Li H
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- Adult, Humans, Mandible diagnostic imaging, Mandible surgery, Nose, Maxilla diagnostic imaging, Maxilla surgery, Lip, Cephalometry methods, Imaging, Three-Dimensional methods, Face diagnostic imaging, Face anatomy & histology, Malocclusion, Angle Class III surgery
- Abstract
This study aimed to study 3-dimensional (3D) changes of hard and soft tissues of skeletal class II patients after 2-jaw surgery and genioplasty. 32 adult patients diagnosed with mandibular hypoplasia who underwent 2-jaw surgery of maxillary impaction, mandibular advancement and genioplasty were enrolled. Cone-beam computed tomography and 3D stereophotogrammetry was conducted 1 week before and 6 months after surgery. Dolphin imaging software was used to establish a 3D digitizing model and 3D measurement system. Paired t-test was performed to compare the values before and after surgery. Pearson's correlation test assessed the degree of correlations between hard and soft tissue change. The mean impaction of the maxilla was 2.600 ± 3.088 mm at A. The mean advancement of the mandible was 7.806 ± 2.647 mm at B. There was a significant upward and forward movement for most landmarks of the nose and lip, while a significant decrease in nasal tip height (lateral view), upper lip height, and upper and lower vermilion height. The nose's width was significantly increased. For maxillary, Sn, Ac-r, Ac-l, and Ls demonstrated a significant correlation with A and U1 in the anteroposterior axis. However, there were no significant correlations among them in the vertical axis. For mandibular, Li demonstrated a significant correlation with L1 in the anteroposterior axis specifically for the mandible. Notably, correlations between the landmarks of the chin's hard and soft tissues were observed across all axes. The utilization of 3-D analysis facilitated a quantitative comprehension of both hard and soft tissues, thereby furnishing valuable insights for the strategic formulation of orthognathic treatment plans targeting patients with skeletal class II conditions., (© 2024. The Author(s).)
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- 2024
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13. Skin autofluorescence, reflecting accumulation of advanced glycation end products, and the risk of dementia in a population-based cohort.
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Mooldijk SS, Lu T, Waqas K, Chen J, Vernooij MW, Ikram MK, Zillikens MC, and Ikram MA
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- Humans, Female, Aged, Male, Glycation End Products, Advanced, Brain diagnostic imaging, Magnetic Resonance Imaging, Skin diagnostic imaging, Diabetes Mellitus, Alzheimer Disease
- Abstract
Conditions such as hyperglycemia and oxidative stress lead to the formation of advanced glycation end products (AGEs), which are harmful compounds that have been implicated in dementia. Within the Rotterdam Study, we measured skin AGEs as skin autofluorescence, reflecting long-term accumulation of AGEs, and determined their association with the risk of dementia and with brain magnetic resonance imaging (MRI) measures. Skin autofluorescence was measured between 2013 and 2016 in 2922 participants without dementia. Of these, 1504 also underwent brain MRI, on which measures of brain atrophy and cerebral small vessel disease were assessed. All participants were followed for the incidence of dementia until 2020. Of 2922 participants (mean age 72.6 years, 57% women), 123 developed dementia. Higher skin autofluorescence (per standard deviation) was associated with an increased risk of dementia (hazard ratio 1.21 [95% confidence interval 1.01-1.46]) and Alzheimer's disease (1.19 [0.97-1.47]), independently of age and other studied potential confounders. Stronger effects were seen in apolipoprotein E (APOE) ε4 carriers (1.34 [0.98-1.82]) and in participants with diabetes (1.35 [0.94-1.94]). Participants with higher skin autofluorescence levels also had smaller total brain volumes and smaller hippocampus volumes on MRI, and they had more often lacunes. These results suggest that AGEs may be involved in dementia pathophysiology., (© 2024. The Author(s).)
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- 2024
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14. miR-373 promotes invasion and metastasis of colorectal cancer cells via activating ERK/MAPK pathway.
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Chen Q, Li Y, Lu T, Luo J, Yang L, Zhou Z, Tian Z, Tan S, and Liu Q
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- Humans, MAP Kinase Signaling System genetics, Phosphatidylinositol 3-Kinases metabolism, Proteomics, Cell Line, Tumor, Cell Movement genetics, Cell Proliferation genetics, Gene Expression Regulation, Neoplastic, MicroRNAs genetics, MicroRNAs metabolism, Colonic Neoplasms pathology, Colorectal Neoplasms genetics, Colorectal Neoplasms pathology
- Abstract
To explore the relationship between miR-373 and the occurrence and development of colorectal cancer. Additionally, it aims to predict the potential cellular signaling pathways and regulatory mechanisms in which miR-373 may be involved and provides a theoretical basis and experimental evidence for the clinical application of miR-373 as a potential biomarker, molecular target, and prognostic indicator in colorectal cancer. Real-time quantitative PCR is used to analyze the expression of miR-373 in human colorectal cancer cell lines and normal human colonic epithelial cells. Further validation of the differential expression of miR-373 in colorectal cancer cell lines is being performed. Biological functions such as cell proliferation, invasion and apoptosis are being detected by MTT, CCK-8, transwell, cell cycle analysis, and flow cytometry experiments to verify the changes in the biological behavior of colon cancer cells after overexpression and interference of miR-373 in SW-480 cells and to explore the effects of miR-373 on cell proliferation, invasion, and apoptosis in colon cancer cells. Proteomic analysis is being conducted on proteins extracted from miR-373 overexpressing SW480 cells, and mass spectrometry is used for protein identification. GO, KEGG, and enrichment analysis are being employed to analyze the significantly differentially expressed proteins. The expression levels of pathway-related proteins are being verified using Western blot. Overexpression of miR-373 increased the invasive and metastatic ability of SW-480 cells; knockdown of miR-373 decreased the invasive and metastatic ability of SW-480 cells. However, there was no statistically significant effect on cell proliferation and apoptosis in SW-480 cells. Proteomic analysis identified 78 differentially expressed proteins based on fold change (FC) > 1.2 and P < 0.05. Annotation of differentially changed proteins revealed that the MAPK signaling pathway, PI3K-Akt signaling pathway, and FAK signaling pathway may play crucial roles in the migration and invasion of colorectal cancer. Western blot analysis showed that overexpression of miR-373 significantly increased the levels of p-ERK1/2 in SW480 cells. miR-373 may activate the ERK/MAPK signaling pathway to promote the invasion and migration of colorectal cancer cells., (© 2024. The Author(s).)
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- 2024
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15. A lightweight weak semantic framework for cinematographic shot classification.
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Li Y, Lu T, and Tian F
- Abstract
Shot is one of the fundamental unit in the content structure of a film, which can provide insights into the film-director's ideas. By analyzing the properties and types of shots, we can gain a better understanding of a film's visual language. In this paper, we delve deeply into the task of shot type classification, proposing that utilizing multimodal video inputs can effectively improve the accuracy of the task, and that shot type classification is closely related to low-level spatiotemporal semantic features. To this end, we propose a Lightweight Weak Semantic Relevance Framework (LWSRNet) for classifying cinematographic shot types. Our framework comprises two modules: a Linear Modalities Fusion module (LMF Module) capable of fusing an arbitrary number of video modalities, and a Weak Semantic 3D-CNN based Feature Extraction Backbone (WSFE Module) for classifying shot movement and scale, respectively. Moreover, to support practical cinematographic analysis, we collect FullShots, a large film shot dataset containing 27K shots from 19 movies with professionally annotations for movement and scale information. Following experimental results validate the correctness of our proposed hypotheses, while our framework also outperforms previous methods in terms of accuracy with fewer parameters and computations, on both FullShots and MovieShots datasets. Our code is available at ( https://github.com/litchiar/ShotClassification )., (© 2023. The Author(s).)
- Published
- 2023
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16. Immunogenic cell death-based prognostic model for predicting the response to immunotherapy and common therapy in lung adenocarcinoma.
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Zhou X, Xu R, Lu T, Wang C, Chang X, Peng B, Shen Z, Yao L, Wang K, Xu C, Shi J, Zhang R, Zhao J, and Zhang L
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- Humans, Prognosis, Immunogenic Cell Death, Immunotherapy, Tumor Microenvironment, Adenocarcinoma of Lung therapy, Lung Neoplasms therapy
- Abstract
Lung adenocarcinoma (LUAD) is a malignant tumor in the respiratory system. The efficacy of current treatment modalities varies greatly, and individualization is evident. Therefore, finding biomarkers for predicting treatment prognosis and providing reference and guidance for formulating treatment options is urgent. Cancer immunotherapy has made distinct progress in the past decades and has a significant effect on LUAD. Immunogenic Cell Death (ICD) can reshape the tumor's immune microenvironment, contributing to immunotherapy. Thus, exploring ICD biomarkers to construct a prognostic model might help individualized treatments. We used a lung adenocarcinoma (LUAD) dataset to identify ICD-related differentially expressed genes (DEGs). Then, these DEGs were clustered and divided into subgroups. We also performed variance analysis in different dimensions. Further, we established and validated a prognostic model by LASSO Cox regression analysis. The risk score in this model was used to evaluate prognostic differences by survival analysis. The treatment prognosis of various therapies were also predicted. LUAD samples were divided into two subgroups. The ICD-high subgroup was related to an immune-hot phenotype more sensitive to immunotherapy. The prognostic model was constructed based on six ICD-related DEGs. We found that high-risk score patients responded better to immunotherapy. The ICD prognostic model was validated as a standalone factor to evaluate the ICD subtype of individual LUAD patients, which might contribute to more effective therapies., (© 2023. Springer Nature Limited.)
- Published
- 2023
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17. HLA-DQ and alcohol in the pathogenesis of irritable bowel syndrome in college students: a case-control study.
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Liu H, Huang L, Li L, Lu T, Liang H, and Liu C
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- Humans, Case-Control Studies, China epidemiology, HLA-DQ Antigens genetics, Ethanol, Students, Genetic Predisposition to Disease, Irritable Bowel Syndrome etiology, Irritable Bowel Syndrome genetics, Celiac Disease genetics
- Abstract
Some researchers have shown that genetics contribute to the incidence of IBS. However, no research has focused on the interaction between HLA-DQ and living habits in the pathogenesis of IBS. The present study explored the risk factors for IBS in college students of Guangxi Han nationality and explored the interaction between HLA-DQ and living habits on the pathogenesis of IBS. Univariate and multivariate analyses were used to determine the risk factors for IBS. Logistic interaction analysis and the Excel table made by Andersson were used to explore the interaction between genes and living habits in the context of IBS. We found that low expression of HLA-DQ2 and DQ8 were associated with the pathogenesis of IBS, while mild to moderate alcohol consumption was associated with the occurrence of IBS symptoms. Only the HLA-DQ8 gene and alcohol consumption had additive interactions in the context of the occurrence of IBS. In other words, for college students of Guangxi Han nationality, HLA-DQ2 and HLA-DQ8 might be protective against IBS, while alcohol consumption might be an independent risk factor. There was an additive interaction between HLA-DQ8 and alcohol consumption in the occurrence of IBS., (© 2023. Springer Nature Limited.)
- Published
- 2023
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18. Synthesis and biological evaluation of substituted acetamide derivatives as potential butyrylcholinestrase inhibitors.
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Yu D, Yang C, Liu Y, Lu T, Li L, Chen G, Liu Z, and Li Y
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- Humans, Acetylcholinesterase metabolism, Molecular Docking Simulation, Cholinesterase Inhibitors chemistry, Amides therapeutic use, Acetamides pharmacology, Acetamides therapeutic use, Structure-Activity Relationship, Molecular Structure, Butyrylcholinesterase metabolism, Alzheimer Disease drug therapy
- Abstract
Alzheimer's disease (AD) is the most common type of age-related dementia. Inhibition of butyrylcholinesterase (BChE) emerge as an effective therapeutic target for AD. A series of new substituted acetamide derivatives were designed, synthesized and evaluated for their ability to inhibit BChE. The bioassay results revealed that several compounds displayed attractive inhibition against BChE). Among them, compound 8c exhibited the highest BChE inhibition with IC
50 values of 3.94 μM. Lineweaver Burk plot indicated that 8c acted as a mixed-type BChE inhibitor. In addition, docking studies confirmed the results obtained through in vitro experiments, and showed that 8c bound to the catalytic anionic site (CAS) and peripheral anionic site (PAS) of BChE active site. Meanwhile, its ADME parameters were approximated using in silico method. Molecular dynamics simulation studies on the complex of 8c-BChE were performed, RMSD, RMSF, Rg, SASA, and the number of hydrogen bonds were calculated as well. These results implied that 8c could serve as appropriate lead molecule for the development of BChE inhibitor., (© 2023. The Author(s).)- Published
- 2023
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19. PRMT5 is a therapeutic target in choroidal neovascularization.
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Muniyandi A, Martin M, Sishtla K, Motolani A, Sun M, Jensen NR, Qi X, Boulton ME, Prabhu L, Lu T, and Corson TW
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- Animals, Mice, Humans, Vascular Endothelial Growth Factor A genetics, Endothelial Cells, NF-kappa B, Retina, Protein-Arginine N-Methyltransferases genetics, Choroidal Neovascularization genetics, Pancreatic Neoplasms
- Abstract
Ocular neovascular diseases including neovascular age-related macular degeneration (nvAMD) are widespread causes of blindness. Patients' non-responsiveness to currently used biologics that target vascular endothelial growth factor (VEGF) poses an unmet need for novel therapies. Here, we identify protein arginine methyltransferase 5 (PRMT5) as a novel therapeutic target for nvAMD. PRMT5 is a well-known epigenetic enzyme. We previously showed that PRMT5 methylates and activates a proangiogenic and proinflammatory transcription factor, the nuclear factor kappa B (NF-κB), which has a master role in tumor progression, notably in pancreatic ductal adenocarcinoma and colorectal cancer. We identified a potent and specific small molecule inhibitor of PRMT5, PR5-LL-CM01, that dampens the methylation and activation of NF-κB. Here for the first time, we assessed the antiangiogenic activity of PR5-LL-CM01 in ocular cells. Immunostaining of human nvAMD sections revealed that PRMT5 is highly expressed in the retinal pigment epithelium (RPE)/choroid where neovascularization occurs, while mouse eyes with laser induced choroidal neovascularization (L-CNV) showed PRMT5 is overexpressed in the retinal ganglion cell layer and in the RPE/choroid. Importantly, inhibition of PRMT5 by PR5-LL-CM01 or shRNA knockdown of PRMT5 in human retinal endothelial cells (HRECs) and induced pluripotent stem cell (iPSC)-derived choroidal endothelial cells (iCEC2) reduced NF-κB activity and the expression of its target genes, such as tumor necrosis factor α (TNF-α) and VEGF-A. In addition to inhibiting angiogenic properties of proliferation and tube formation, PR5-LL-CM01 blocked cell cycle progression at G
1 /S-phase in a dose-dependent manner in these cells. Thus, we provide the first evidence that inhibition of PRMT5 impedes angiogenesis in ocular endothelial cells, suggesting PRMT5 as a potential therapeutic target to ameliorate ocular neovascularization., (© 2023. The Author(s).)- Published
- 2023
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20. Novel multi-mode shortwave broadcast transmitting antenna array.
- Author
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Yao W, Gao H, Tian Y, Lu T, and Zhang X
- Abstract
Currently, shortwave broadcasting in the range of 5.9-26.1 MHz remains a relatively large blind spot within 900 km owing to the limitations of ionospheric characteristics. Reducing the emission frequency is a feasible approach for covering blind spots and improving broadcast performance. Thus, a new type of shortwave broadcasting antenna array capable of reducing the lowest emission frequency to 4.4 MHz is proposed in this paper. An electromagnetic simulation software is used to optimize the design. The simulation analysis shows that for the 4 × 4 multi-mode shortwave broadband transmitting antenna array, the gain obtained is 12-23.5 dB in the 4.4-27.4 MHz frequency band, and the VSWR for each mode is lower than 2.5. The radiation patterns at 5.9 MHz and 4.4 MHz on a vertical plane are compared, and the results prove that the radiation elevation angle of the new transmitting array increases significantly. The larger elevation angle and lower frequency ensure the enhancement of close-range coverage. A scale model prototype is fabricated and characterized, and the results of the measurement agree well with those of the simulations. It provides a theoretical basis and technical support for the improved design of broadband high-power shortwave broadcasting transmitting antenna systems., (© 2022. The Author(s).)
- Published
- 2022
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21. Adiponectin is negatively associated with disease activity and Sharp score in treatment-naïve Han Chinese rheumatoid arthritis patients.
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Chen X, Wang K, Lu T, Wang J, Zhou T, Tian J, Zhou B, Long L, and Zhou Q
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- Adult, Aged, Case-Control Studies, Cross-Sectional Studies, Female, Humans, Linear Models, Male, Middle Aged, Adiponectin blood, Arthritis, Rheumatoid blood, Severity of Illness Index
- Abstract
The association and potential role of the protein hormone adiponectin in autoimmune diseases causing musculoskeletal disorders, including rheumatoid arthritis (RA), are controversial. Conflicting results may arise from the influences of confounding factors linked to genetic backgrounds, disease stage, disease-modifying anti-rheumatic drugs and patients' metabolic characteristics. Here, we examined serum level of adiponectin and its relationship with disease activity score 28 with erythrocytes sedimentation rate (DAS28[ESR]) and Sharp score in a treatment-naïve Han Chinese RA population. This cross-sectional study enrolled 125 RA patients. Serum level of total adiponectin was assessed by enzyme-linked immunosorbent assay (ELISA). Other important clinical and laboratory parameters were collected from the hospital database. DAS28(ESR) was calculated according to the equation previously published. Sharp score was evaluated based on hands radiographs by an independent radiologist. The correlation between serum adiponectin level and DAS28(ESR) or the Sharp score was investigated by univariate and multivariable linear regression analyses, respectively. Multiple imputation by chained equations was used to account for missing data. Univariate analyses showed a significant positive correlation between DAS28(ESR) and age or C-reactive protein (CRP) (both p = 0.003), while serum adiponectin level was negatively correlated with DAS28(ESR) (p = 0.015). The negative correlation between adiponectin level and DAS28(ESR) remained true in multivariable analyses adjusted for confounders. In addition, the univariate analyses revealed positive correlations of Sharp score to disease duration (p < 0.001), CRP (p = 0.023) and ESR (p < 0.001). In the multivariable model adjusted for confounders, adiponectin was negatively correlated with Sharp score (p = 0.013). In this single-institution cross-sectional study, serum adiponectin level in treatment-naive RA patients is negatively correlated with DAS28(ESR) and the Sharp score after adjustment for prominent identified confounders. Serum adiponectin may be potentially useful for assessing disease activity and radiographic progression of RA., (© 2022. The Author(s).)
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- 2022
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22. Refractive lens power and lens thickness in children (6-16 years old).
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Lu T, Song J, Wu Q, Jiang W, Tian Q, Zhang X, Xu J, Wu J, Hu Y, Sun W, and Bi H
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- Adolescent, Age Factors, Biometry, Child, China, Cross-Sectional Studies, Female, Humans, Lens, Crystalline physiology, Male, Refractive Errors etiology, Refractive Errors physiopathology, Refractometry, Sex Factors, Lens, Crystalline anatomy & histology, Refraction, Ocular physiology
- Abstract
To examine the refractive lens power (RLP) and lens thickness and their associated factors in children from North-Western China. Children from two schools (primary school and junior high school) in the North-Western Chinese province of Qinghai underwent a comprehensive ophthalmic examination including biometry and cycloplegic refractometry. The RLP was calculated using Bennett's equation. The study included 596 (77.9%) individuals (mean age: 11.0 ± 2.8 years; range: 6-16 years) with a mean axial length of 23.65 ± 1.24 mm (range: 20.02-27.96 mm). Mean lens thickness was 3.30 ± 0.16 mm (range: 2.85-3.99 mm) and mean RLP was 24.85 ± 1.98D (range: 19.40-32.97). In univariate analysis, girls as compared to boys had a significantly thicker lens and greater RLP, shorter axial length, smaller corneal curvature radius and shorter corneal curvature radius (all P < 0.001). Both sexes did not differ significantly in refractive error (P = 0.11) and corneal thickness (P = 0.16). RLP was positively associated with refractive error (correlation coefficient r = 0.33; P < 0.001) and lens thickness (r = 0.62; P < 0.001) and negatively with axial length (r = - 0.70; P < 0.001). In univariate analysis, RLP decreased significantly with older age in the age group from age 6-13, while it plateaued thereafter, with no significant difference between boys and girls. In multivariate regression analysis, a higher RLP was associated with younger age (P < 0.001; standard regression coefficient β = - 0.07), female sex (P < 0.001; β = - 0.08), shorter axial length (P < 0.001; β = - 0.48) and higher lens thickness (P < 0.001; β = 0.42). In Chinese children, RLP with a mean of 24.85 ± 1.98D decreases with older age, male sex, longer axial length, and thinner lens thickness. Changes in RLP and axial length elongation are important players in the emmetropization and myopization., (© 2021. The Author(s).)
- Published
- 2021
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23. Universal activation function for machine learning.
- Author
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Yuen B, Hoang MT, Dong X, and Lu T
- Abstract
This article proposes a universal activation function (UAF) that achieves near optimal performance in quantification, classification, and reinforcement learning (RL) problems. For any given problem, the gradient descent algorithms are able to evolve the UAF to a suitable activation function by tuning the UAF's parameters. For the CIFAR-10 classification using the VGG-8 neural network, the UAF converges to the Mish like activation function, which has near optimal performance [Formula: see text] when compared to other activation functions. In the graph convolutional neural network on the CORA dataset, the UAF evolves to the identity function and obtains [Formula: see text]. For the quantification of simulated 9-gas mixtures in 30 dB signal-to-noise ratio (SNR) environments, the UAF converges to the identity function, which has near optimal root mean square error of [Formula: see text]. In the ZINC molecular solubility quantification using graph neural networks, the UAF morphs to a LeakyReLU/Sigmoid hybrid and achieves RMSE=[Formula: see text]. For the BipedalWalker-v2 RL dataset, the UAF achieves the 250 reward in [Formula: see text] epochs with a brand new activation function, which gives the fastest convergence rate among the activation functions., (© 2021. The Author(s).)
- Published
- 2021
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24. Author Correction: A generic intelligent tomato classification system for practical applications using DenseNet-201 with transfer learning.
- Author
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Lu T, Han B, Chen L, Yu F, and Xue C
- Published
- 2021
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25. A generic intelligent tomato classification system for practical applications using DenseNet-201 with transfer learning.
- Author
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Lu T, Han B, Chen L, Yu F, and Xue C
- Abstract
A generic intelligent tomato classification system based on DenseNet-201 with transfer learning was proposed and the augmented training sets obtained by data augmentation methods were employed to train the model. The trained model achieved high classification accuracy on the images of different quality, even those containing high levels of noise. Also, the trained model could accurately and efficiently identify and classify a single tomato image with only 29 ms, indicating that the proposed model has great potential value in real-world applications. The feature visualization of the trained models shows their understanding of tomato images, i.e., the learned common and high-level features. The strongest activations of the trained models show that the correct or incorrect target recognition areas by a model during the classification process will affect its final classification accuracy. Based on this, the results obtained in this study could provide guidance and new ideas to improve the development of intelligent agriculture., (© 2021. The Author(s).)
- Published
- 2021
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26. Aptamer-targeting of Aleutian mink disease virus (AMDV) can be an effective strategy to inhibit virus replication.
- Author
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Lu T, Zhang H, Zhou J, Ma Q, Yan W, Zhao L, Wu S, and Chen H
- Subjects
- Aleutian Mink Disease Virus genetics, Capsid Proteins genetics, Genes, Viral, Real-Time Polymerase Chain Reaction, Aleutian Mink Disease Virus physiology, Aptamers, Nucleotide genetics, SELEX Aptamer Technique methods, Virus Replication genetics
- Abstract
Aleutian mink disease (AMD), which is caused by Aleutian mink disease virus (AMDV), is an important contagious disease for which no effective vaccine is yet available. AMD causes major economic losses for mink farmers globally and threatens some carnivores such as skunks, genets, foxes and raccoons. Aptamers have exciting potential for the diagnosis and/or treatment of infectious viral diseases, including AMD. Using a magnetic beads-based systemic evolution of ligands by exponential enrichment (SELEX) approach, we have developed aptamers with activity against AMDV after 10 rounds of selection. After incubation with the ADVa012 aptamer (4 μM) for 48 h, the concentration of AMDV in the supernatant of infected cells was 47% lower than in the supernatant of untreated cells, whereas a random library of aptamers has no effect. The half-life of ADVa012 was ~ 32 h, which is significantly longer than that of other aptamers. Sequences and three dimensions structural modeling of selected aptamers indicated that they fold into similar stem-loop structures, which may be a preferred structure for binding to the target protein. The ADVa012 aptamer was shown to have an effective and long-lasting inhibitory effect on viral production in vitro.
- Published
- 2021
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27. Development of a reverse transcription loop mediated isothermal amplification assay for the detection of Mouse reovirus type 3 in laboratory mice.
- Author
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Lu T, Tao L, Yu H, Zhang H, Wu Y, Wu S, and Zhou J
- Subjects
- Animals, Mice, Sensitivity and Specificity, Mammalian orthoreovirus 3 genetics, Mammalian orthoreovirus 3 metabolism, Molecular Diagnostic Techniques methods, Nucleic Acid Amplification Techniques methods, RNA, Viral genetics, Reverse Transcription physiology
- Abstract
Mouse reovirus type 3 (Reo-3) infection is a viral disease that is harmful for laboratory mice. No rapid and accurate detection methods are currently available for this infection. In this study, we describe a rapid, simple, closed-tube, one step, reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for Reo-3 and compare our assay with indirect enzyme-linked immunosorbent assay (ELISA). Three sets of RT-LAMP primers were designed by sequence analysis of a specific conserved sequence of the Reo-3 S1 gene. Using RS2 primer set, the RT-LAMP assay required 60 min at 65 °C to amplify the S1 gene in one step by using Reo-3 RNA template and had no cross-reactivity with the other related pathogens, such as Sendai virus (SV), pneumonia virus of mice (PVM), mouse hepatitis virus (MHV), Ectromelia virus (Ect), minute virus of mice (MVM), P. pneumotropica, B. bronchiseptica, K. pneumonia and P. aeruginosa. in our LAMP reaction system. The limit of detection (LOD) of our RT-LAMP assay is 4 fg/μL. The established RT-LAMP assay enabled visual detection when fluorescence detection reagents were added, and was demonstrated to be effective and efficient. We tested 30 clinical blood samples and five artificial positive samples from SPF mice, the concordance between the two methods for blood samples was 100% compared with indirect ELISA and RT-PCR. Considering its performance, specificity, sensitivity, and repeatability, the developed RT-LAMP could be a valuable tool to supply a more effective Reo-3 detection method in laboratory animal quality monitoring.
- Published
- 2021
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28. Identification of the raw and processed Crataegi Fructus based on the electronic nose coupled with chemometric methods.
- Author
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Fei C, Ren C, Wang Y, Li L, Li W, Yin F, Lu T, and Yin W
- Abstract
Crataegi Fructus (CF) is widely used as a medicinal and edible material around the world. Currently, different types of processed CF products are commonly found in the market. Quality evaluation of them mainly relies on chemical content determination, which is time and money consuming. To rapidly and nondestructively discriminate different types of processed CF products, an electronic nose coupled with chemometrics was developed. The odour detection method of CF was first established by single-factor investigation. Then, the sensor array was optimised by a stepwise discriminant analysis (SDA) and analysis of variance (ANOVA). Based on the best-optimised sensor array, the digital and mode standard were established, realizing the odour quality control of samples. Meanwhile, mathematical prediction models including the discriminant formula and back-propagation neural network (BPNN) model exhibited good evaluation with a high accuracy rate. These results suggest that the developed electronic nose system could be an alternative way for evaluating the odour of different types of processed CF products.
- Published
- 2021
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29. Synthetic Host Defense Peptides Inhibit Venezuelan Equine Encephalitis Virus Replication and the Associated Inflammatory Response.
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Ahmed A, Bakovic A, Risner K, Kortchak S, Der Torossian Torres M, de la Fuente-Nunez C, Lu T, Bhalla N, and Narayanan A
- Subjects
- Animals, Anti-Inflammatory Agents pharmacology, Antimicrobial Cationic Peptides chemical synthesis, Antimicrobial Cationic Peptides chemistry, Antiviral Agents pharmacology, Cell Line, Chlorocebus aethiops, Disease Models, Animal, Encephalitis Virus, Venezuelan Equine genetics, Horses, Humans, Inflammation, Mice, Vero Cells, Antimicrobial Cationic Peptides pharmacology, Encephalitis Virus, Venezuelan Equine metabolism, Virus Replication drug effects
- Abstract
Venezuelan equine encephalitis virus (VEEV), a New World alphavirus of the Togaviridae family of viruses causes periodic outbreaks of disease in humans and equines. Disease following VEEV infection manifests as a febrile illness with flu-like symptoms, which can progress to encephalitis and cause permanent neurological sequelae in a small number of cases. VEEV is classified as a category B select agent due to ease of aerosolization and high retention of infectivity in the aerosol form. Currently, there are no FDA-approved vaccines or therapeutics available to combat VEEV infection. VEEV infection in vivo is characterized by extensive systemic inflammation that can exacerbate infection by potentially increasing the susceptibility of off-site cells to infection and dissemination of the virus. Hence, a therapeutic targeting both the infection and associated inflammation represents an unmet need. We have previously demonstrated that host defense peptides (HDPs), short peptides that are key components of the innate immune response, exhibit antiviral activity against a multitude of viruses including VEEV. In this study, we designed synthetic peptides derived from indolicidin, a naturally occurring HDP, and tested their efficacy against VEEV. Two candidate synthetic peptides inhibited VEEV replication by approximately 1000-fold and decreased the expression of inflammatory mediators such as IL1α, IL1β, IFNγ, and TNFα at both the gene and protein expression levels. Furthermore, an increase in expression levels of genes involved in chemotaxis of leukocytes and anti-inflammatory genes such as IL1RN was also observed. Overall, we conclude that our synthetic peptides inhibit VEEV replication and the inflammatory burden associated with VEEV infection.
- Published
- 2020
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30. PRMT5-mediated methylation of YBX1 regulates NF-κB activity in colorectal cancer.
- Author
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Hartley AV, Wang B, Mundade R, Jiang G, Sun M, Wei H, Sun S, Liu Y, and Lu T
- Subjects
- Apoptosis, Biomarkers, Tumor genetics, Cell Movement, Cell Proliferation, Colorectal Neoplasms genetics, Colorectal Neoplasms metabolism, Humans, NF-kappa B genetics, Protein Processing, Post-Translational, Protein-Arginine N-Methyltransferases genetics, Tumor Cells, Cultured, Y-Box-Binding Protein 1 genetics, Biomarkers, Tumor metabolism, Colorectal Neoplasms pathology, DNA Methylation, Gene Expression Regulation, Neoplastic, NF-kappa B metabolism, Protein-Arginine N-Methyltransferases metabolism, Y-Box-Binding Protein 1 metabolism
- Abstract
The multifunctional protein Y-box binding protein 1 (YBX1), is a critical regulator of transcription and translation, and is widely recognized as an oncogenic driver in several solid tumors, including colorectal cancer (CRC). However, very little is known about the upstream or downstream factors that underlie YBX1's regulation and involvement in CRC. Previously, we demonstrated that YBX1 overexpression correlated with potent activation of nuclear factor κB (NF-κB), a well-known transcription factor believed to be crucial in CRC progression. Here, we report a novel interaction between NF-κB, YBX1 and protein arginine methyltransferase 5 (PRMT5). Our findings reveal for the first time that PRMT5 catalyzes methylation of YBX1 at arginine 205 (YBX1-R205me2), an event that is critical for YBX1-mediated NF-κB activation and its downstream target gene expression. Importantly, when WT-YBX1 is overexpressed, this methylation exists under basal (unstimulated) conditions and is further augmented upon interleukin-1β (IL-1β) stimulation. Mechanistically, co-immunoprecipitation studies reveal that the R205 to alanine (A) mutant of YBX1 (YBX1-R205A) interacted less well with the p65 subunit of NF-κB and attenuated the DNA binding ability of p65. Importantly, overexpression of YBX1-R205A significantly reduced cell growth, migration and anchorage-independent growth of CRC cells. Collectively, our findings shed important light on the regulation of a novel PRMT5/YBX1/NF-κB axis through PRMT5-mediated YBX1-R205 methylation. Given the fact that PRMT5, YBX1 and NF-κB are all among top crucial factors in cancer progression, pharmacological disruption of this pivotal axis could serve as the basis for new therapeutics for CRC and other PRMT5/YBX1/NF-κB-associated cancers.
- Published
- 2020
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31. Integrative Circuit-Host Modeling of a Genetic Switch in Varying Environments.
- Author
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Sickle JJ, Ni C, Shen D, Wang Z, Jin M, and Lu T
- Subjects
- Gene Regulatory Networks physiology, Genes, Switch genetics, Models, Genetic, Synthetic Biology methods
- Abstract
Synthetic biology is advancing into a new phase where real-world applications are emphasized. There is hence an urgent need for mathematical modeling that can quantitatively describe the behaviors of genetic devices in natural, fluctuating environments. We utilize an integrative circuit-host modeling framework to examine the dynamics of a genetic switch and its host cell in varying environments. For both steady-state and transient cases, we find increasing nutrient reduces the bistability region of the phase space and eventually drives the switch from bistability to monostability. In response, cellular growth and proteome partitioning experience the same transition. Antibiotic perturbations cause the similar circuit and host responses as nutrient variations. However, one difference is the trend of growth rate, which augments with nutrient but declines with antibiotic levels. The framework provides a mechanistic scheme to account for both the dynamic and static characteristics of the circuit-host system upon environmental perturbations, underscoring the intimacy of gene circuits and their hosts and elucidating the complexity of circuit behaviors arising from environmental variations.
- Published
- 2020
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- View/download PDF
32. Serum miRNA as a possible biomarker in the diagnosis of bipolar II disorder.
- Author
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Lee SY, Lu RB, Wang LJ, Chang CH, Lu T, Wang TY, and Tsai KW
- Subjects
- Adult, Aged, Area Under Curve, Asian People genetics, Biomarkers, Bipolar Disorder blood, Bipolar Disorder genetics, Female, Genetic Association Studies, Humans, Male, Middle Aged, ROC Curve, Sensitivity and Specificity, Young Adult, Bipolar Disorder diagnosis, MicroRNAs blood
- Abstract
The diagnosis of Bipolar II disorder (BD-II) is currently based on the patients' description of symptoms and clinical behavioral observations. This study explored the possibility of miRNA in peripheral blood (serum) as a specific biomarker for BD-II. We identified 6 candidate miRNAs to differentiate BD-II patients from controls using next-generation sequencing. We then examined these candidate miRNAs using real-time PCR in the first cohort (as training group) of 79 BD-II and 95 controls. A diagnostic model was built based on these candidate miRNAs and then tested on an individual testing group (BD-II: n = 20, controls: n = 20). We found that serum expression levels of miR-7-5p, miR-23b-3p, miR-142-3p, miR-221-5p, and miR-370-3p significantly increased in BD-II compared with controls in the first cohort, whereas that of miR-145-5p showed no significant difference. The diagnostic power of the identified miRNAs was further analyzed using receiver-operating characteristic (ROC). Support vector machine (SVM) measurements revealed that a combination of the significant miRNAs reached good diagnostic accuracy (AUC: 0.907). We further examined an independent testing group and the diagnostic power reached fair for BD-II (specificity = 90%, sensitivity = 85%). We constructed miRNA panels using SVM model, which may aid in the diagnosis for BD-II.
- Published
- 2020
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33. A Dual-modality Smartphone Microendoscope for Quantifying the Physiological and Morphological Properties of Epithelial Tissues.
- Author
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Hong X, Lu T, Fruzyna L, and Yu B
- Subjects
- Feasibility Studies, Fiber Optic Technology, Humans, Mouth Mucosa, Optical Imaging methods, Phantoms, Imaging, Endoscopy methods, Epithelium physiology, Smartphone
- Abstract
We report a nonconcurrent dual-modality fiber-optic microendoscope (named SmartME) that integrates quantitative diffuse reflectance spectroscopy (DRS) and high-resolution fluorescence imaging (FLI) into a smartphone platform. The FLI module has a spatial resolution of ~3.5 µm, which allows the determination of the nuclear-cytoplasmic ratio (N/C) of epithelial tissues. The DRS has a spectral resolution of ~2 nm and can measure the total hemoglobin concentration (THC) and scattering properties of epithelial tissues with mean errors of 4.7% and 6.9%, respectively, which are comparable to the errors achieved with a benchtop spectrometer. Our preliminary in vivo studies from a single healthy human subject demonstrate that the SmartME can noninvasively quantify the tissue parameters of normal human oral mucosa tissues, including labial mucosa tissue, gingival tissue, and tongue dorsum tissue. The THCs of the three oral mucosa tissues are significantly different from each other (p ≤ 0.003). The reduced scattering coefficients of the gingival and labial tissues are significantly different from those of the tongue dorsum tissue (p < 0.001) but are not significantly different from each other. The N/Cs for all three tissue types are similar. The SmartME has great potential to be used as a portable, cost-effective, and globally connected tool to quantify the THC and scattering properties of tissues in vivo.
- Published
- 2019
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34. The benefits of modified FOLFIRINOX for advanced pancreatic cancer and its induced adverse events: a systematic review and meta-analysis.
- Author
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Tong H, Fan Z, Liu B, and Lu T
- Subjects
- Fatigue chemically induced, Fluorouracil adverse effects, Fluorouracil therapeutic use, Humans, Irinotecan adverse effects, Irinotecan therapeutic use, Leucovorin adverse effects, Leucovorin therapeutic use, Nausea chemically induced, Neutropenia chemically induced, Oxaliplatin adverse effects, Oxaliplatin therapeutic use, Pancreas drug effects, Pancreas pathology, Pancreatic Neoplasms pathology, Survival Analysis, Thrombocytopenia chemically induced, Treatment Outcome, Antineoplastic Agents adverse effects, Antineoplastic Agents therapeutic use, Antineoplastic Combined Chemotherapy Protocols adverse effects, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Pancreatic Neoplasms drug therapy
- Abstract
FOLFIRINOX has been one of the first-line options for advanced pancreatic cancer, even though it induces significant adverse effects. Several institutions have begun using modified FOLFIRINOX to decrease its side effects and increase its tolerability. We systematically investigated the outcome from patients who initially received modified FOLFIRINOX as a chemotherapy regimen for advanced pancreatic cancer. We used the random-model generic inverse variance method to analyse the binary data with 95% confidence intervals (CIs). Eleven studies were included in the meta-analysis with 563 total patients. The 6-month and 1-year overall survival (OS) rates of locally advanced pancreatic cancer (LAPC) were 90.9% and 76.2%. The 6-month and 1-year progression-free survival (PFS) rates of LAPC were 81.5% and 48.5%. The 6-month and 1-year OS rates of metastatic pancreatic cancer (MPC) were 79.7% and 47.6%. The 6-month and 1-year PFS rates of MPC were 56.3% and 20.6%. The following rates were also calculated: complete response rate (CR): 2.9%; partial response rate (PR): 35.9%; stable disease rate (SD): 41.2%; overall response rate (OR): 34.6%; disease control rate (DCR): 76.7%; progressive disease: 23.1%; and grade III/IV adverse events (AEs): neutropenia 23.1%, febrile neutropenia 4.8%, thrombocytopenia 4.8%, anaemia 5.7%, fatigue 11.5%, nausea 9.1%, diarrhoea 10.1%, vomiting 5.7%, neuropathy 3.8%, and increased ALT 5.7%. In conclusion, modified FOLFIRINOX could provide comparative survival benefits with fewer adverse events compared to the conventional dosage.
- Published
- 2018
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35. Flow behavior of N 2 huff and puff process for enhanced oil recovery in tight oil reservoirs.
- Author
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Lu T, Li Z, Li J, Hou D, and Zhang D
- Abstract
In the present work, the potential of N
2 huff and puff process to enhance the recovery of tight oil reservoir was evaluated. N2 huff and puff experiments were performed in micromodels and cores to investigate the flow behaviors of different cycles. The results showed that, in the first cycle, N2 was dispersed in the oil, forming the foamy oil flow. In the second cycle, the dispersed gas bubbles gradually coalesced into the continuous gas phase. In the third cycle, N2 was produced in the form of continuous gas phase. The results from the coreflood tests showed that, the primary recovery was only 5.32%, while the recoveries for the three N2 huff and puff cycles were 15.1%, 8.53% and 3.22%, respectively.The recovery and the pressure gradient in the first cycle were high. With the increase of huff and puff cycles, and the oil recovery and the pressure gradient rapidly decreased. The oil recovery of N2 huff and puff has been found to increase as the N2 injection pressure and the soaking time increased. These results showed that, the properly designed and controlled N2 huff and puff process can lead to enhanced recovery of tight oil reservoirs.- Published
- 2017
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36. Bivalent DNA vaccine induces significant immune responses against infectious hematopoietic necrosis virus and infectious pancreatic necrosis virus in rainbow trout.
- Author
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Xu L, Zhao J, Liu M, Ren G, Jian F, Yin J, Feng J, Liu H, and Lu T
- Subjects
- Animals, Antibodies, Viral, Birnaviridae Infections immunology, Birnaviridae Infections prevention & control, Coinfection immunology, Coinfection veterinary, Coinfection virology, Fish Diseases prevention & control, Fish Diseases virology, Head Kidney virology, Rhabdoviridae Infections immunology, Rhabdoviridae Infections prevention & control, Viral Vaccines immunology, Birnaviridae Infections veterinary, Fish Diseases immunology, Infectious hematopoietic necrosis virus immunology, Infectious pancreatic necrosis virus immunology, Oncorhynchus mykiss, Rhabdoviridae Infections veterinary, Vaccines, DNA immunology
- Abstract
Infectious hematopoietic necrosis virus (IHNV) and infectious pancreatic necrosis virus (IPNV) are important pathogens of salmon and trout. An active bivalent DNA vaccine was constructed with the glycoprotein gene of Chinese IHNV isolate Sn1203 and VP2-VP3 gene of Chinese IPNV isolate ChRtm213. Rainbow trout (5 g) were vaccinated by intramuscular injection with 1.0 µg of the bivalent DNA vaccine and then challenged with an intraperitoneal injection of IHNV, IPNV, or both, at 30 and 60 days post-vaccination (d.p.v.). High protection rates against IHNV were observed, with 6% and 10% cumulative mortality, respectively, compared with 90-94% in the mock-vaccinated groups. IPNV loads (531-fold and 135-fold, respectively) were significantly reduced in the anterior kidneys of the vaccinated trout. Significant protection against co-infection with IHNV and IPNV was observed, with cumulative mortality rates of 6.67% and 3.33%, respectively, compared with 50.0% and 43.3%, respectively, in the mock-vaccinated groups. No detectable infective IHNV or IPNV was recovered from vaccinated trout co-infected with IHNV and IPNV. The bivalent DNA vaccine increased the expression of Mx-1 and IFN-γ at 4, 7, and 15 d.p.v, and IgM at 21 d.p.v., and induced high titres (≥160) of IHNV and IPNV neutralizing antibodies at 30 and 60 d.p.v.
- Published
- 2017
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37. GdmRIII, a TetR Family Transcriptional Regulator, Controls Geldanamycin and Elaiophylin Biosynthesis in Streptomyces autolyticus CGMCC0516.
- Author
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Jiang M, Yin M, Wu S, Han X, Ji K, Wen M, and Lu T
- Subjects
- Anti-Bacterial Agents biosynthesis, Bacterial Proteins metabolism, Base Sequence, Binding Sites, Multigene Family, Promoter Regions, Genetic, Protein Binding, Streptomyces metabolism, Trans-Activators metabolism, Transcriptional Activation, Bacterial Proteins genetics, Benzoquinones metabolism, Gene Expression Regulation, Bacterial, Lactams, Macrocyclic metabolism, Macrolides metabolism, Streptomyces genetics, Trans-Activators genetics
- Abstract
Geldanamycin and elaiophylin are co-produced in several Streptomyces strains. However, the regulation of their biosynthesis is not fully understood yet. Herein the function of a TetR family regulator GdmRIII, which is located in the biosynthetic gene cluster of geldanamycin, was studied to understand the regulatory mechanism of geldanamycin biosynthesis in Streptomyces autolyticus CGMCC0516. The production of geldanamycin decreased substantially in a ΔgdmRIII mutant and the yield of three compounds which were thought to be geldanamycin congeners greatly increased. Surprisingly, the structural elucidation of these compounds showed that they were elaiophylin and its analogues, which implied that GdmRIII not only played a positive regulatory role in the biosynthesis of geldanamycin, but also played a negative role in elaiophylin biosynthesis. GdmRIII affected the expression of multiple genes in both gene clusters, and directly regulated the expression of gdmM, gdmN, and elaF by binding to the promoter regions of these three genes. A conserved non-palindromic sequence was found among the binding sites of elaF. Our findings suggested that the biosynthetic pathways of geldanamycin and elaiophylin were connected through GdmRIII, which might provide a way for Streptomyces to coordinate the biosynthesis of these compounds for better adapting to environment changes.
- Published
- 2017
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38. Diffraction phase microscopy imaging and multi-physics modeling of the nanoscale thermal expansion of a suspended resistor.
- Author
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Wang X, Lu T, Yu X, Jin JM, and Goddard LL
- Abstract
We studied the nanoscale thermal expansion of a suspended resistor both theoretically and experimentally and obtained consistent results. In the theoretical analysis, we used a three-dimensional coupled electrical-thermal-mechanical simulation and obtained the temperature and displacement field of the suspended resistor under a direct current (DC) input voltage. In the experiment, we recorded a sequence of images of the axial thermal expansion of the central bridge region of the suspended resistor at a rate of 1.8 frames/s by using epi-illumination diffraction phase microscopy (epi-DPM). This method accurately measured nanometer level relative height changes of the resistor in a temporally and spatially resolved manner. Upon application of a 2 V step in voltage, the resistor exhibited a steady-state increase in resistance of 1.14 Ω and in relative height of 3.5 nm, which agreed reasonably well with the predicted values of 1.08 Ω and 4.4 nm, respectively.
- Published
- 2017
- Full Text
- View/download PDF
39. Genetic variants in the transcription regulatory region of MEGF10 are associated with autism in Chinese Han population.
- Author
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Wu Z, Qin J, You Y, Ma Y, Jia M, Wang L, Lu T, Yue W, Ruan Y, Zhang D, Li J, and Wang L
- Subjects
- Alleles, Asian People genetics, Autistic Disorder ethnology, China, Family Health, Female, Gene Frequency, Genetic Predisposition to Disease ethnology, Genotype, Haplotypes, Humans, Linkage Disequilibrium, Male, Autistic Disorder genetics, Genetic Predisposition to Disease genetics, Membrane Proteins genetics, Polymorphism, Single Nucleotide, Regulatory Elements, Transcriptional genetics, Transcription Initiation Site
- Abstract
Multiple epidermal growth factor-like-domains 10 (MEGF10), a critical member of the apoptotic engulfment pathway, mediates axon pruning and synapse elimination during brain development. Previous studies indicated that synaptic pruning deficit was associated with autism-related phenotypes. However, the relationship between MEGF10 and autism remains poorly understood. Disease-associated variants are significantly enriched in the transcription regulatory regions. These include the transcription start site (TSS) and its cis-regulatory elements. To investigate the role of MEGF10 variants with putative transcription regulatory function in the etiology of autism, we performed a family-based association study in 410 Chinese Han trios. Our results indicate that three single nucleotide polymorphisms (SNPs), rs4836316, rs2194079 and rs4836317 near the TSS are significantly associated with autism following Bonferroni correction (p = 0.0011, p = 0.0088, and p = 0.0023, respectively). Haplotype T-A-G (rs4836316-rs2194079-rs4836317) was preferentially transmitted from parents to affected offspring (p
permutation = 0.0055). Consistently, functional exploration further verified that the risk allele and haplotype might influence its binding with transcription factors, resulting in decreased transcriptional activity of MEGF10. Our findings indicated that the risk alleles and haplotype near the MEGF10 TSS might modulate transcriptional activity and increase the susceptibility to autism.- Published
- 2017
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40. Functional Characterization of Populus PsnSHN2 in Coordinated Regulation of Secondary Wall Components in Tobacco.
- Author
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Liu Y, Wei M, Hou C, Lu T, Liu L, Wei H, Cheng Y, and Wei Z
- Subjects
- Cell Wall, Cellulose metabolism, Gene Expression Regulation, Plant, Genes, Plant, Lignin metabolism, Plant Proteins metabolism, Polysaccharides metabolism, Populus metabolism, Sequence Analysis, DNA, Sequence Analysis, Protein, Transcription Factors genetics, Transcription Factors metabolism, Two-Hybrid System Techniques, Wood genetics, Wood metabolism, Plant Proteins genetics, Populus genetics, Nicotiana metabolism
- Abstract
Wood formation is a biological process during which the most abundant lignocellulosic biomass on earth is produced. Although a number of transcription factors have been linked to the regulation of wood formation process, none of them has been demonstrated to be a higher hierarchical regulator that coordinately regulates secondary wall biosynthesis genes. Here, we identified a Populus gene, PsnSHN2, a counterpart of the Arabidopsis AP2/ERF type transcription factor, SHINE2. PsnSHN2 is predominantly expressed in xylem tissues and acted evidently as a high hierarchical transcriptional activator. Overexpression of PsnSHN2 in tobacco significantly altered the expression of both transcription factors and biosynthesis genes involved in secondary wall formation, leading to the thickened secondary walls and the changed cell wall composition. The most significant changes occurred in the contents of cellulose and hemicellulose that increased 37% and 28%, respectively, whereas the content of lignin that decreased 34%. Furthermore, PsnSHN2 activated or repressed the promoter activities of transcription factors involved in secondary wall biosynthesis and bound to five cis-acting elements enriched in the promoter regions of these transcription factors. Taken together, our results suggest PsnSHN2 coordinately regulate secondary wall formation through selective up/down-regulation of its downstream transcription factors that control secondary wall formation.
- Published
- 2017
- Full Text
- View/download PDF
41. Neoadjuvant chemotherapy followed by concurrent chemoradiotherapy versus concurrent chemoradiotherapy alone in nasopharyngeal carcinoma patients with cervical nodal necrosis.
- Author
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Lan M, Chen C, Huang Y, Tian L, Duan Z, Han F, Liao J, Deng M, Sio TT, Prayongrat A, Zheng L, Wu S, and Lu T
- Subjects
- Adult, Carcinoma diagnostic imaging, Carcinoma mortality, Carcinoma pathology, Cervical Vertebrae diagnostic imaging, Cervical Vertebrae pathology, Chemoradiotherapy adverse effects, Female, Follow-Up Studies, Humans, Leukopenia etiology, Leukopenia mortality, Leukopenia pathology, Lymph Nodes diagnostic imaging, Lymph Nodes pathology, Magnetic Resonance Imaging, Male, Middle Aged, Mucositis etiology, Mucositis mortality, Mucositis pathology, Nasopharyngeal Carcinoma, Nasopharyngeal Neoplasms diagnostic imaging, Nasopharyngeal Neoplasms mortality, Nasopharyngeal Neoplasms pathology, Necrosis diagnostic imaging, Necrosis mortality, Necrosis pathology, Neoadjuvant Therapy adverse effects, Neoplasm Staging, Patient Compliance, Retrospective Studies, Survival Analysis, Antineoplastic Agents therapeutic use, Carcinoma therapy, Chemoradiotherapy methods, Combined Modality Therapy methods, Nasopharyngeal Neoplasms therapy, Necrosis therapy, Neoadjuvant Therapy methods
- Abstract
The effectiveness of neoadjuvant chemotherapy (NACT) followed by concurrent chemoradiotherapy (CCRT) compared with CCRT alone in nasopharyngeal carcinoma (NPC) patients who presented with cervical nodal necrosis (CNN) is unknown. A total of 792 patients with stage T1-4N1-3M0 NPC and presented with CNN based on magnetic resonance imaging were retrospectively reviewed. Propensity score matching method was used to balance treatment arms for baseline characteristics. Eventually, 508 patients were propensity-matched on a 1:1 basis to create two groups (NACT + CCRT and CCRT groups). Survival rates were calculated by Kaplan-Meier method and differences were compared by using the log-rank test. The 5-year disease specific survival, disease-free survival and distant metastasis-free survival were significantly higher in NACT + CCRT group relative to the matched CCRT group (82.1% vs. 72.5%, P = 0.021; 70.3% vs. 54.1%, P < 0.001; 81.9% vs. 67.3%, P < 0.001, respectively). Although the rates of grade 3-4 leucopenia and mucositis were higher in NACT + CCRT group than CCRT group, compliance with the combined treatment was good and no significant difference was observed between two groups. NACT followed by CCRT was relatively safe and could achieve better survival than CCRT alone in NPC patients with CNN by reducing the risk of death, tumor progression and distant metastasis.
- Published
- 2017
- Full Text
- View/download PDF
42. Genetic variations in the PI3K-PTEN-AKT-mTOR pathway are associated with distant metastasis in nasopharyngeal carcinoma patients treated with intensity-modulated radiation therapy.
- Author
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Guo Q, Lu T, Chen Y, Su Y, Zheng Y, Chen Z, Chen C, Lin S, Pan J, and Yuan X
- Subjects
- Carcinoma pathology, Female, Humans, Kaplan-Meier Estimate, Male, Middle Aged, Nasopharyngeal Carcinoma, Nasopharyngeal Neoplasms pathology, Neoplasm Metastasis, Phosphatidylinositol 3-Kinases metabolism, Polymorphism, Single Nucleotide genetics, Prognosis, Proto-Oncogene Proteins c-akt metabolism, Risk Factors, Carcinoma genetics, Carcinoma radiotherapy, Genetic Variation, Nasopharyngeal Neoplasms genetics, Nasopharyngeal Neoplasms radiotherapy, Phosphatidylinositol 3-Kinases genetics, Proto-Oncogene Proteins c-akt genetics, Radiotherapy, Intensity-Modulated, Signal Transduction genetics, TOR Serine-Threonine Kinases genetics
- Abstract
Distant metastasis is the primary failure pattern of nasopharyngeal carcinoma(NPC) in intensity-modulated radiation therapy(IMRT) era. This study was conducted to find the impact of genetic variations in the phosphatidylinositol 3-kinase(PI3K)/phosphatase and tensin homologue(PTEN)/v-akt murine thymoma viral oncogene homologue(AKT)/mammalian target of rapamycin(mTOR) pathway on the risk of distant metastasis in NPC. We genotyped 16 single-nucleotide polymorphisms(SNPs) in five core genes in this pathway from 496 patients treated by IMRT with or without chemotherapy. The relationships between genetic polymorphisms and distant progression were evaluated. We observed that two loci in the AKT1 gene(rs3803300 and rs2494738 alone or combined) were associated with prognosis, with patients carrying at least one variant allele had significantly reduced risk of distant failure, especially in N2-3 group. In addition, we found that genetic variation may had some joint effect with N classification in recursive-partitioning analysis(RPA) analysis, with which patients were stratified into four different risk subgroups (RPA model): RPA1(low risk), RPA2(moderate risk), RPA3(high risk) and RPA4(highest risk). Our findings suggested that genetic variations within the PI3K signaling pathway modulate the development and invasion of NPC patients. Further research is needed to replicate the study in other centers and races, and to unravel the functional significance of these polymorphisms.
- Published
- 2016
- Full Text
- View/download PDF
43. Electrospun carbon nanofibers reinforced 3D porous carbon polyhedra network derived from metal-organic frameworks for capacitive deionization.
- Author
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Liu Y, Ma J, Lu T, and Pan L
- Abstract
Carbon nanofibers reinforced 3D porous carbon polyhedra network (e-CNF-PCP) was prepared through electrospinning and subsequent thermal treatment. The morphology, structure and electrochemical performance of the e-CNF-PCP were characterized using scanning electron microscopy, Raman spectra, nitrogen adsorption-desorption, cyclic voltammetry and electrochemical impedance spectroscopy, and their electrosorption performance in NaCl solution was studied. The results show that the e-CNF-PCP exhibits a high electrosorption capacity of 16.98 mg g(-1) at 1.2 V in 500 mg l(-1) NaCl solution, which shows great improvement compared with those of electrospun carbon nanofibers and porous carbon polyhedra. The e-CNF-PCP should be a very promising candidate as electrode material for CDI applications.
- Published
- 2016
- Full Text
- View/download PDF
44. Genome-wide DNA methylation analysis in obsessive-compulsive disorder patients.
- Author
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Yue W, Cheng W, Liu Z, Tang Y, Lu T, Zhang D, Tang M, and Huang Y
- Subjects
- Adult, Case-Control Studies, Cluster Analysis, CpG Islands, Epigenesis, Genetic, Female, Gene Regulatory Networks, Genetic Predisposition to Disease, Humans, Male, Promoter Regions, Genetic, DNA Methylation, Genome-Wide Association Study methods, Obsessive-Compulsive Disorder genetics
- Abstract
Literatures have suggested that not only genetic but also environmental factors, interactively accounted for susceptibility of obsessive-compulsive disorder (OCD). DNA methylation may regulate expression of genes as the heritable epigenetic modification. The examination for genome-wide DNA methylation was performed on blood samples from 65 patients with OCD, as well as 96 healthy control subjects. The DNA methylation was examined at over 485,000 CpG sites using the Illumina Infinium Human Methylation450 BeadChip. As a result, 8,417 probes corresponding to 2,190 unique genes were found to be differentially methylated between OCD and healthy control subjects. Of those genes, 4,013 loci were located in CpG islands and 2,478 were in promoter regions. These included BCYRN1, BCOR, FGF13, HLA-DRB1, ARX, etc., which have previously been reported to be associated with OCD. Pathway analyses indicated that regulation of actin cytoskeleton, cell adhesion molecules (CAMs), actin binding, transcription regulator activity, and other pathways might be further associated with risk of OCD. Unsupervised clustering analysis of the top 3,000 most variable probes revealed two distinct groups with significantly more people with OCD in cluster one compared with controls (67.74% of cases v.s. 27.13% of controls, Chi-square = 26.011, df = 1, P = 3.41E-07). These results strongly suggested that differential DNA methylation might play an important role in etiology of OCD.
- Published
- 2016
- Full Text
- View/download PDF
45. Hybrid kappa\lambda antibody is a new serological marker to diagnose autoimmune pancreatitis and differentiate it from pancreatic cancer.
- Author
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Hao M, Li W, Yi L, Yu S, Fan G, Lu T, Yang X, Wang G, Zhang D, Ding J, Zhang K, Zhang R, Lin G, Han Y, Wang L, and Li J
- Subjects
- Acute Disease, Diagnosis, Differential, Enzyme-Linked Immunosorbent Assay, Humans, Immunoglobulin G immunology, Sensitivity and Specificity, Autoimmune Diseases diagnosis, Immunoglobulin kappa-Chains immunology, Immunoglobulin lambda-Chains immunology, Pancreatic Neoplasms diagnosis, Pancreatitis diagnosis
- Abstract
The only generally accepted serological marker currently used for the diagnosis of autoimmune pancreatitis (AIP) is IgG4. Our aim was mainly to determine whether hybrid κ\λ antibody can help to diagnose AIP and to differentiate it from pancreatic cancer. We established an enzyme-linked immunosorbent assay (ELISA) system to measure the levels of hybrid κ\λ antibodies in human sera. Sera were obtained from 338 patients, including 61 with AIP, 74 with pancreatic cancer, 50 with acute pancreatitis, 40 with ordinary chronic pancreatitis, 15 with miscellaneous pancreatic diseases, and 98 with normal pancreas. Our study showed levels of hybrid κ\λ antibodies in the AIP group were significantly higher than in the non-AIP group (P < 0.001). The sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) for the diagnosis of AIP were 80.3%, 91%, 66.2% and 95.5% respectively. Furthermore, the combined measurement of serum hybrid κ\λ antibody and IgG4 tended to increase the sensitivity although the difference was not statistically significant (90.2% vs. 78.7%, P = 0.08), compared to measurement of IgG4 alone. Our findings suggest that hybrid κ\λ antibody could be a new serological marker to diagnose AIP and differentiate it from pancreatic cancer.
- Published
- 2016
- Full Text
- View/download PDF
46. Tensional acoustomechanical soft metamaterials.
- Author
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Xin F and Lu T
- Abstract
We create acoustomechanical soft metamaterials whose response to uniaxial tensile stressing can be easily tailored by programming acoustic wave inputs, resulting in force versus stretch curves that exhibit distinct monotonic, s-shape, plateau and non-monotonic snapping behaviors. We theoretically demonstrate this unique metamaterial by considering a thin soft material sheet impinged by two counter-propagating ultrasonic wave inputs across its thickness and stretched by an in-plane uniaxial tensile force. We establish a theoretical acoustomechanical model to describe the programmable mechanics of such soft metamaterial, and introduce the first- and second-order tangential stiffness of its force versus stretch curve to boundary different behaviors that appear during deformation. The proposed phase diagrams for the underlying nonlinear mechanics show promising prospects for designing tunable and switchable photonic/phononic crystals and microfluidic devices that harness snap-through instability.
- Published
- 2016
- Full Text
- View/download PDF
47. Electric-field-induced AFE-FE transitions and associated strain/preferred orientation in antiferroelectric PLZST.
- Author
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Lu T, Studer AJ, Noren L, Hu W, Yu D, McBride B, Feng Y, Withers RL, Chen H, Xu Z, and Liu Y
- Abstract
Electric-field-induced, antiferroelectric-ferroelectric (AFE-FE) phase transitions are common for AFE materials. To date, the strain and preferred orientation evolution as well as the role of the intermediate FE state during the successive AFE-FE-AFE phase transitions has not been clear. To this end, we have herein studied a typical AFE Pb0.97La0.02(Zr0.56Sn0.33Ti0.11)O3 (PLZST) material using in-situ neutron diffraction. It is striking that the AFE-FE phase transition is not fully reversible: in the electric-field-induced FE state, the induced strain exhibits an elliptical distribution, which in turn leads to significant preferred orientation in the final AFE state after withdrawal of the applied electric-field. The ω-dependent neutron diffraction patterns show clear evidence of the induced strain distribution and associated preferred orientation arising from the AFE-FE phase transition. The current work also provides an explanation for several temperature and electric-field dependent dielectric anomalies as well as unrecovered strain change which appear in AFE materials after exposure to sufficiently high electric fields.
- Published
- 2016
- Full Text
- View/download PDF
48. Nano-thick calcium oxide armed titanium: boosts bone cells against methicillin-resistant Staphylococcus aureus.
- Author
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Cao H, Qin H, Zhao Y, Jin G, Lu T, Meng F, Zhang X, and Liu X
- Subjects
- Alkaline Phosphatase genetics, Alkaline Phosphatase metabolism, Animals, Anti-Bacterial Agents chemical synthesis, Biomarkers metabolism, Bone Morphogenetic Proteins genetics, Bone Morphogenetic Proteins metabolism, Bone-Implant Interface, Calcium Compounds chemistry, Coated Materials, Biocompatible, Female, Gene Expression, Mesenchymal Stem Cells cytology, Mesenchymal Stem Cells drug effects, Mesenchymal Stem Cells metabolism, Methicillin-Resistant Staphylococcus aureus drug effects, Methicillin-Resistant Staphylococcus aureus growth & development, Nanostructures chemistry, Osteocalcin genetics, Osteocalcin metabolism, Osteogenesis genetics, Osteopontin genetics, Osteopontin metabolism, Oxides chemistry, Plasma Gases, Primary Cell Culture, Prostheses and Implants, Prosthesis-Related Infections microbiology, Rabbits, Staphylococcal Infections microbiology, Tibia drug effects, Tibia injuries, Tibia microbiology, Anti-Bacterial Agents pharmacology, Calcium Compounds pharmacology, Osteogenesis drug effects, Oxides pharmacology, Prosthesis-Related Infections prevention & control, Staphylococcal Infections prevention & control, Titanium chemistry
- Abstract
Since the use of systemic antibiotics for preventing acute biomaterial-associated infections (BAIs) may build up bacterial resistance and result in huge medical costs and unpredictable mortality, new precaution strategies are required. Here, it demonstrated that titanium armed with a nano-thick calcium oxide layer was effective on averting methicillin-resistant Staphylococcus aureus (MRSA) infections in rabbits. The calcium oxide layer was constructed by, firstly, injecting of metallic calcium into titanium via a plasma immersion ion implantation process, and then transforming the outer most surface into oxide by exposing to the atmosphere. Although the calcium oxide armed titanium had a relative low reduction rate (~74%) in growth of MRSA in vitro, it could markedly promote the osteogenic differentiation of bone marrow stem cells (BMSCs), restore local bone integration against the challenge of MRSA, and decrease the incidence of MRSA infection with a rate of 100% (compared to the titanium control). This study demonstrated for the first time that calcium, as one of the major elements in a human body, could be engineered to avert MRSA infections, which is promising as a safe precaution of disinfection for implantable biomedical devices.
- Published
- 2016
- Full Text
- View/download PDF
49. Molecular spectrum of KRAS, NRAS, BRAF and PIK3CA mutations in Chinese colorectal cancer patients: analysis of 1,110 cases.
- Author
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Zhang J, Zheng J, Yang Y, Lu J, Gao J, Lu T, Sun J, Jiang H, Zhu Y, Zheng Y, Liang Z, and Liu T
- Subjects
- Adult, Aged, Aged, 80 and over, Class I Phosphatidylinositol 3-Kinases, Colorectal Neoplasms pathology, Female, High-Throughput Nucleotide Sequencing, Humans, Logistic Models, Male, Middle Aged, Multivariate Analysis, Polymerase Chain Reaction, Young Adult, Asian People genetics, Colorectal Neoplasms genetics, GTP Phosphohydrolases genetics, Membrane Proteins genetics, Mutation genetics, Phosphatidylinositol 3-Kinases genetics, Proto-Oncogene Proteins B-raf genetics, Proto-Oncogene Proteins p21(ras) genetics
- Abstract
Mutations in genes such as KRAS, NRAS, BRAF and PIK3CA have become an important part of colorectal carcinoma evaluation. The aim of this study was to screen for mutations in these genes in Chinese patients with colorectal cancer (CRC) and to explore their correlations with certain clinicopathological parameters. We tested mutations in the KRAS (exons 2, 3 and 4), NRAS (exons 2, 3 and 4), PIK3CA (exon 20) and BRAF (exon 15) genes using reverse transcriptase-polymerase chain reaction (RT-PCR) and Sanger sequencing in a large cohort of 1,110 Chinese CRC patients who underwent surgical resection at one of three major teaching hospitals located in different regions of China. The prevalence rates of KRAS, NRAS, BRAF and PIK3CA mutations were 45.4%, 3.9%, 3.1% and 3.5%, respectively. Mutant KRAS was associated with the mucinous subtype and greater differentiation, while mutant BRAF was associated with right-sided tumors and poorer differentiation. Our results revealed differences in the genetic profiles of KRAS, NRAS, PIK3CA and BRAF at mutation hotspots between Chinese CRC patients and those of Western countries, while some of these gene features were shared among patients from other Asian countries.
- Published
- 2015
- Full Text
- View/download PDF
50. Ezh2 is involved in radial neuronal migration through regulating Reelin expression in cerebral cortex.
- Author
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Zhao L, Li J, Ma Y, Wang J, Pan W, Gao K, Zhang Z, Lu T, Ruan Y, Yue W, Zhao S, Wang L, and Zhang D
- Subjects
- Animals, Enhancer of Zeste Homolog 2 Protein, Humans, Reelin Protein, Cell Adhesion Molecules, Neuronal metabolism, Cell Movement physiology, Cerebral Cortex metabolism, Extracellular Matrix Proteins metabolism, Nerve Tissue Proteins metabolism, Neurons physiology, Polycomb Repressive Complex 2 physiology, Serine Endopeptidases metabolism
- Abstract
Radial migration of pyramidal neurons is an important event during the development of cerebral cortex. Neurons experience series of morphological and directional transitions to get to their final laminar positions. Here we report that the histone methyltransferase enhancer of zest homolog 2 (Ezh2) is involved in the regulation of cortical radial migration. We show that Ezh2 knockdown leads to disturbed neuronal orientation, which results in the impairment of radial migration. Further results reveal that this migration deficiency may be due to the derepression of Reelin transcription in the migrating neurons. Our study provides evidence that epigenetic regulation of Reelin by Ezh2 maintains appropriate Reelin expression pattern to fulfill proper orientation of migrating neurons.
- Published
- 2015
- Full Text
- View/download PDF
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