236,278 results
Search Results
202. Characterizing social media metrics of scholarly papers: the effect of document properties and collaboration patterns.
- Author
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Stefanie Haustein, Rodrigo Costas, and Vincent Larivière
- Subjects
Medicine ,Science - Abstract
A number of new metrics based on social media platforms--grouped under the term "altmetrics"--have recently been introduced as potential indicators of research impact. Despite their current popularity, there is a lack of information regarding the determinants of these metrics. Using publication and citation data from 1.3 million papers published in 2012 and covered in Thomson Reuters' Web of Science as well as social media counts from Altmetric.com, this paper analyses the main patterns of five social media metrics as a function of document characteristics (i.e., discipline, document type, title length, number of pages and references) and collaborative practices and compares them to patterns known for citations. Results show that the presence of papers on social media is low, with 21.5% of papers receiving at least one tweet, 4.7% being shared on Facebook, 1.9% mentioned on blogs, 0.8% found on Google+ and 0.7% discussed in mainstream media. By contrast, 66.8% of papers have received at least one citation. Our findings show that both citations and social media metrics increase with the extent of collaboration and the length of the references list. On the other hand, while editorials and news items are seldom cited, it is these types of document that are the most popular on Twitter. Similarly, while longer papers typically attract more citations, an opposite trend is seen on social media platforms. Finally, contrary to what is observed for citations, it is papers in the Social Sciences and humanities that are the most often found on social media platforms. On the whole, these findings suggest that factors driving social media and citations are different. Therefore, social media metrics cannot actually be seen as alternatives to citations; at most, they may function as complements to other type of indicators.
- Published
- 2015
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203. Is there a relationship between research sponsorship and publication impact? An analysis of funding acknowledgments in nanotechnology papers.
- Author
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Jue Wang and Philip Shapira
- Subjects
Medicine ,Science - Abstract
This study analyzes funding acknowledgments in scientific papers to investigate relationships between research sponsorship and publication impacts. We identify acknowledgments to research sponsors for nanotechnology papers published in the Web of Science during a one-year sample period. We examine the citations accrued by these papers and the journal impact factors of their publication titles. The results show that publications from grant sponsored research exhibit higher impacts in terms of both journal ranking and citation counts than research that is not grant sponsored. We discuss the method and models used, and the insights provided by this approach as well as it limitations.
- Published
- 2015
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204. Evolution of Cooperation Patterns in Psoriasis Research: Co-Authorship Network Analysis of Papers in Medline (1942-2013).
- Author
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Gregorio González-Alcaide, Jinseo Park, Charles Huamaní, Isabel Belinchón, and José M Ramos
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Medicine ,Science - Abstract
BackgroundAlthough researchers have worked in collaboration since the origins of modern science and the publication of the first scientific journals in the eighteenth century, this phenomenon has acquired exceptional importance in the last several decades. Since the mid-twentieth century, new knowledge has been generated from within an ever-growing network of investigators, working cooperatively in research groups across countries and institutions. Cooperation is a crucial determinant of academic success.ObjectiveThe aim of the present paper is to analyze the evolution of scientific collaboration at the micro level, with regard to the scientific production generated on psoriasis research.MethodsA bibliographic search in the Medline database containing the MeSH terms "psoriasis" or "psoriatic arthritis" was carried out. The search results were limited to articles, reviews and letters. After identifying the co-authorships of documents on psoriasis indexed in the Medline database (1942-2013), various bibliometric indicators were obtained, including the average number of authors per document and degree of multi-authorship over time. In addition, we performed a network analysis to study the evolution of certain features of the co-authorship network as a whole: average degree, size of the largest component, clustering coefficient, density and average distance. We also analyzed the evolution of the giant component to characterize the changing research patterns in the field, and we calculated social network indicators for the nodes, namely betweenness and closeness.ResultsThe main active research clusters in the area were identified, along with their authors of reference. Our analysis of 28,670 documents sheds light on different aspects related to the evolution of scientific collaboration in the field, including the progressive increase in the mean number of co-authors (which stood at 5.17 in the 2004-2013 decade), and the rise in multi-authored papers signed by many different authors (in the same decade, 25.77% of the documents had between 6 and 9 co-authors, and 10.28% had 10 or more). With regard to the network indicators, the average degree gradually increased up to 10.97 in the study period. The percentage of authors pertaining to the largest component also rose to 73.02% of the authors. The clustering coefficient, on the other hand, remained stable throughout the entire 70-year period, with values hovering around 0.9. Finally, the average distance peaked in the decades 1974-1983 (8.29) and 1984-2003 (8.12) then fell over the next two decades, down to 5.25 in 2004-2013. The construction of the co-authorship network (threshold of collaboration ≥ 10 co-authored works) revealed a giant component of 161 researchers, containing 6 highly cohesive sub-components.ConclusionsOur study reveals the existence of a growing research community in which collaboration is increasingly important. We can highlight an essential feature associated with scientific collaboration: multi-authored papers, with growing numbers of collaborators contributing to them, are becoming more and more common, therefore the formation of research groups of increasing depth (specialization) and breadth (multidisciplinarity) is now a cornerstone of research success.
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- 2015
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205. Building a comprehensive mill-level database for the Industrial Sectors Integrated Solutions (ISIS) model of the U.S. pulp and paper sector.
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Nabanita Modak, Kelley Spence, Saloni Sood, and Jacky Ann Rosati
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Medicine ,Science - Abstract
Air emissions from the U.S. pulp and paper sector have been federally regulated since 1978; however, regulations are periodically reviewed and revised to improve efficiency and effectiveness of existing emission standards. The Industrial Sectors Integrated Solutions (ISIS) model for the pulp and paper sector is currently under development at the U.S. Environmental Protection Agency (EPA), and can be utilized to facilitate multi-pollutant, sector-based analyses that are performed in conjunction with regulatory development. The model utilizes a multi-sector, multi-product dynamic linear modeling framework that evaluates the economic impact of emission reduction strategies for multiple air pollutants. The ISIS model considers facility-level economic, environmental, and technical parameters, as well as sector-level market data, to estimate the impacts of environmental regulations on the pulp and paper industry. Specifically, the model can be used to estimate U.S. and global market impacts of new or more stringent air regulations, such as impacts on product price, exports and imports, market demands, capital investment, and mill closures. One major challenge to developing a representative model is the need for an extensive amount of data. This article discusses the collection and processing of data for use in the model, as well as the methods used for building the ISIS pulp and paper database that facilitates the required analyses to support the air quality management of the pulp and paper sector.
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- 2015
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206. Preparation and Characterization of Self-Reinforced Antibacterial and Oil-Resistant Paper Using a NaOH/Urea/ZnO Solution.
- Author
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Li Jiao, Jinxia Ma, and Hongqi Dai
- Subjects
Medicine ,Science - Abstract
This paper describes self-reinforced antibacterial and oil-resistant properties that were successfully prepared by surface selective dissolution of filter paper in a NaOH/Urea/ZnO (weight ratio of 8:12:0.25) aqueous solution. The effect of the processing time on the mechanical properties of this paper was evaluated at -12°C. The paper morphologies were characterized using Scanning Electron Microscopy (SEM), X-ray Diffraction (XRD), Fourier Transform Infrared Spectroscopy (FT-IR) and X-ray photoelectron spectroscopy (XPS). The oil-resistance and antibacterial properties of the produced paper were also investigated. Excellent mechanical properties were observed for an optimized handling time. The tensile and burst strengths of the modified paper were in excess of 100% of the original. Meanwhile, the treated paper was completely oil-resistant within 24 h and demonstrated good antibacterial properties when exposed to Staphylococcus aureus. The traces of residual zinc oxide were found to be safe for food.
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- 2015
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207. Performance of an Optimized Paper-Based Test for Rapid Visual Measurement of Alanine Aminotransferase (ALT) in Fingerstick and Venipuncture Samples.
- Author
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Sidhartha Jain, Radha Rajasingham, Farzad Noubary, Erin Coonahan, Ryan Schoeplein, Rachel Baden, Michael Curry, Nezam Afdhal, Shailendra Kumar, and Nira R Pollock
- Subjects
Medicine ,Science - Abstract
A paper-based, multiplexed, microfluidic assay has been developed to visually measure alanine aminotransferase (ALT) in a fingerstick sample, generating rapid, semi-quantitative results. Prior studies indicated a need for improved accuracy; the device was subsequently optimized using an FDA-approved automated platform (Abaxis Piccolo Xpress) as a comparator. Here, we evaluated the performance of the optimized paper test for measurement of ALT in fingerstick blood and serum, as compared to Abaxis and Roche/Hitachi platforms. To evaluate feasibility of remote results interpretation, we also compared reading cell phone camera images of completed tests to reading the device in real time.96 ambulatory patients with varied baseline ALT concentration underwent fingerstick testing using the paper device; cell phone images of completed devices were taken and texted to a blinded off-site reader. Venipuncture serum was obtained from 93/96 participants for routine clinical testing (Roche/Hitachi); subsequently, 88/93 serum samples were captured and applied to paper and Abaxis platforms. Paper test and reference standard results were compared by Bland-Altman analysis.For serum, there was excellent agreement between paper test and Abaxis results, with negligible bias (+4.5 U/L). Abaxis results were systematically 8.6% lower than Roche/Hitachi results. ALT values in fingerstick samples tested on paper were systematically lower than values in paired serum tested on paper (bias -23.6 U/L) or Abaxis (bias -18.4 U/L); a correction factor was developed for the paper device to match fingerstick blood to serum. Visual reads of cell phone images closely matched reads made in real time (bias +5.5 U/L).The paper ALT test is highly accurate for serum testing, matching the reference method against which it was optimized better than the reference methods matched each other. A systematic difference exists between ALT values in fingerstick and paired serum samples, and can be addressed by application of a correction factor to fingerstick values. Remote reading of this device is feasible.
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- 2015
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208. Peer-selected 'best papers'-are they really that 'good'?
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Jacques Wainer, Michael Eckmann, and Anderson Rocha
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Medicine ,Science - Abstract
Peer evaluation is the cornerstone of science evaluation. In this paper, we analyze whether or not a form of peer evaluation, the pre-publication selection of the best papers in Computer Science (CS) conferences, is better than random, when considering future citations received by the papers.Considering 12 conferences (for several years), we collected the citation counts from Scopus for both the best papers and the non-best papers. For a different set of 17 conferences, we collected the data from Google Scholar. For each data set, we computed the proportion of cases whereby the best paper has more citations. We also compare this proportion for years before 2010 and after to evaluate if there is a propaganda effect. Finally, we count the proportion of best papers that are in the top 10% and 20% most cited for each conference instance.The probability that a best paper will receive more citations than a non best paper is 0.72 (95% CI = 0.66, 0.77) for the Scopus data, and 0.78 (95% CI = 0.74, 0.81) for the Scholar data. There are no significant changes in the probabilities for different years. Also, 51% of the best papers are among the top 10% most cited papers in each conference/year, and 64% of them are among the top 20% most cited.There is strong evidence that the selection of best papers in Computer Science conferences is better than a random selection, and that a significant number of the best papers are among the top cited papers in the conference.
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- 2015
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209. The Multimedia Piers-Harris Children's Self-Concept Scale 2: Its Psychometric Properties, Equivalence with the Paper-and-Pencil Version, and Respondent Preferences.
- Author
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Mon-hsin Wang Flahive, Ying-Chih Chuang, and Chien-Mo Li
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Medicine ,Science - Abstract
A multimedia version of Piers-Harris Children's Self-Concept Scale 2 (Piers-Harris 2) was created with audio and cartoon animation to facilitate the measurement of self-concept among younger children. This study aimed to assess the psychometric qualities of the computer version of Piers-Harris 2 scores, examine its score equivalence with the paper-and-pencil version, and survey the respondent preference of the two versions. Two hundred and forty eight Taiwanese students from the first to fourth grade were recruited. In regard to the psychometric properties, high internal consistency (α = .91) was found for the total score of multimedia Piers-Harris 2. High interscale correlations (.77 to .83) of the multimedia Piers-Harris 2 scores and the results of confirmatory factor analysis suggested the multimedia Piers-Harris 2 contained good structural characteristics. The scores of the multimedia Piers-Harris 2 also had significant correlations with the scores of the Elementary School Children's Self Concept Scale. The equality of convergence and criterion-related validities of Piers-Harris 2 scores for the multimedia and paper-and-pencil versions and the results of ICCs between the scores of the multimedia and paper-and-pencil Piers-Harris 2 suggested their high level of equivalence. Participants showed more positive attitudes towards the multimedia version.
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- 2015
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210. Comparing the efficiency of paper-based and electronic data capture during face-to-face interviews.
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Tate A and Smallwood C
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- Animals, Aquatic Organisms, Australia, Cost-Benefit Analysis, Data Accuracy, Fishes, Humans, Random Allocation, Recreation, Western Australia, Fisheries, Interviews as Topic methods, Marine Biology, Surveys and Questionnaires
- Abstract
On-site surveys involving face-to-face interviews are implemented globally across many scientific disciplines. Incorporating new technologies into such surveys by using electronic devices is becoming more common and is widely viewed to be more cost-effective and accurate. However, Electronic Data Capture methods (EDC) when compared to traditional Paper-based Data Capture (PDC) are often implemented without proper evaluation of any changes in efficiency, especially from surveys in coastal and marine environments. A roving creel survey of recreational shore-based fishers in Western Australia in 2019 enabled a direct comparison between the two methods. Randomisation strategies were employed to ensure biases in using each technique were minimised. A total of 1,068 interviews with recreational fishers were undertaken with a total error rate of 5.1% (CI95%: 4.8-5.3%) for PDC and 3.1% (CI95%: 2.9-3.3%) for EDC. These results confirmed that EDC can reduce errors whilst increasing efficiency and decreasing cost, although some aspects of this platform could be improved with some streamlining. This study demonstrates how EDC can be successfully implemented in coastal and marine environments without compromising the randomised, stratified nature of a survey and highlights the cost-effectiveness of this method. Such findings can be widely applied to any discipline which uses face-to-face interviews for data collection., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2021
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211. Facile Preparation of Nanostructured, Superhydrophobic Filter Paper for Efficient Water/Oil Separation.
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Wang, Jianhua, Wong, Jessica X. H., Kwok, Honoria, Li, Xiaochun, and Yu, Hua-Zhong
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- *
NANOSTRUCTURED materials , *OIL-water interfaces , *FILTER paper , *SEPARATION (Technology) , *SURFACE preparation , *SUPERHYDROPHOBIC surfaces - Abstract
In this paper, we present a facile and cost-effective method to obtain superhydrophobic filter paper and demonstrate its application for efficient water/oil separation. By coupling structurally distinct organosilane precursors (e.g., octadecyltrichlorosilane and methyltrichlorosilane) to paper fibers under controlled reaction conditions, we have formulated a simple, inexpensive, and efficient protocol to achieve a desirable superhydrophobic and superoleophilic surface on conventional filter paper. The silanized superhydrophobic filter paper showed nanostructured morphology and demonstrated great separation efficiency (up to 99.4%) for water/oil mixtures. The modified filter paper is stable in both aqueous solutions and organic solvents, and can be reused multiple times. The present study shows that our newly developed binary silanization is a promising method of modifying cellulose-based materials for practical applications, in particular the treatment of industrial waste water and ecosystem recovery. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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212. Agreements and Discrepancies between FDA Reports and Journal Papers on Biologic Agents Approved for Rheumatoid Arthritis: A Meta-Research Project.
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Gil Amarilyo, Daniel E Furst, Jennifer M P Woo, Wen Li, Henning Bliddal, Robin Christensen, and Simon Tarp
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Medicine ,Science - Abstract
BACKGROUND:Sponsors that seek to commercialize new drugs apply to the Food and Drug Administration (FDA) which independently analyzes the raw data and reports the results on its website. OBJECTIVES:This study sought to determine if there are differences between the FDA assessments and journal reports on biologic agents developed for the treatment of rheumatoid arthritis. METHODS:Available data on FDA-approved drugs were extracted from the website, and a systematic literature search was conducted to identify matching studies in peer-reviewed medical journals. Outcome measures were the American College of Rheumatology response criteria ACR20 (efficacy) and withdrawal due to adverse events (safety). As effect size odds ratios were estimated for each active trial arm vs. control arm (i.e. for both sources: FDA and journal report), followed by calculation of the ratios of the FDA and journal report odds ratios. A ratio of odds ratios not equal to 1 was categorized as a discrepancy. RESULTS:FDA reports were available for 8 of 9 FDA-approved biologic agents for rheumatoid arthritis; all identified trials (34) except one were published in peer-reviewed journals. Overall, discrepancies were noted for 20 of the 33 evaluated trials. Differences in the apparent benefit reporting were found in 39% (24/61) pairwise comparisons and in 11 cases these were statistically significant; the FDA report showed greater benefit than the journal publication in 15 comparisons and lesser benefit in 9. Differences in the reported harms were found in 51% (28/55) pairwise comparisons and were statistically significant in 5. The "signal" in FDA reports showed a less harmful effect than the journal publication in 17 comparisons whereas a more harmful effect in 11. The differences were attributed to differences in analytic approach, patient inclusion, rounding effect, and counting discrepancies. However, no differences were categorized as critical. CONCLUSION:There was no empirical evidence to suggest biased estimates between the two sources. Increased and detailed transparency in publications would improve the understanding and credibility of published results. Further, the FDA report was found to be a useful source when data are missing in the published report (i.e. reporting bias).
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- 2016
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213. Correction: Sex Distribution of Paper Mulberry (Broussonetia papyrifera) in the Pacific.
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Johany Peñailillo, Gabriela Olivares, Ximena Moncada, Claudia Payacán, Chi-Shan Chang, Kuo-Fang Chung, Peter J Matthews, Andrea Seelenfreund, and Daniela Seelenfreund
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Medicine ,Science - Abstract
[This corrects the article DOI: 10.1371/journal.pone.0161148.].
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- 2016
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214. Social and content aware One-Class recommendation of papers in scientific social networks.
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Wang, Gang, He, XiRan, and Ishuga, Carolyne Isigi
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INFORMATION technology ,SOCIAL networks ,SPARSE graphs ,HYBRID computers (Computer architecture) ,HYBRID power systems - Abstract
With the rapid development of information technology, scientific social networks (SSNs) have become the fastest and most convenient way for researchers to communicate with each other. Many published papers are shared via SSNs every day, resulting in the problem of information overload. How to appropriately recommend personalized and highly valuable papers for researchers is becoming more urgent. However, when recommending papers in SSNs, only a small amount of positive instances are available, leaving a vast amount of unlabelled data, in which negative instances and potential unseen positive instances are mixed together, which naturally belongs to One-Class Collaborative Filtering (OCCF) problem. Therefore, considering the extreme data imbalance and data sparsity of this OCCF problem, a hybrid approach of Social and Content aware One-class Recommendation of Papers in SSNs, termed SCORP, is proposed in this study. Unlike previous approaches recommended to address the OCCF problem, social information, which has been proved playing a significant role in performing recommendations in many domains, is applied in both the profiling of content-based filtering and the collaborative filtering to achieve superior recommendations. To verify the effectiveness of the proposed SCORP approach, a real-life dataset from CiteULike was employed. The experimental results demonstrate that the proposed approach is superior to all of the compared approaches, thus providing a more effective method for recommending papers in SSNs. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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215. Comment on the paper "Cost-effectiveness of sofosbuvir in hepatitis C genotype 1 infection in Germany: A reanalysis of published results".
- Author
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Mühlbacher AC and Sadler A
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- Cost-Benefit Analysis, Genotype, Germany, Hepacivirus genetics, Humans, Hepatitis C drug therapy, Sofosbuvir therapeutic use
- Abstract
Competing Interests: AM and SA are authors of the work disputed by Gandjour. Previous work related to the letter of Gandjour was financed by Gilead. Further study grants in the last five years were received from Abbvie, Janssen Cilag and Johnson & Johnson.
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- 2021
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216. Are papers addressing certain diseases perceived where these diseases are prevalent? The proposal to use Twitter data as social-spatial sensors.
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Bornmann, Lutz, Haunschild, Robin, and Patel, Vanash M.
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HIV , *MICROBLOGS , *DETECTORS , *MALARIA - Abstract
We propose to use Twitter data as social-spatial sensors. This study deals with the question whether research papers on certain diseases are perceived by people in regions (worldwide) that are especially concerned by these diseases. Since (some) Twitter data contain location information, it is possible to spatially map the activity of Twitter users referring to certain papers (e.g., dealing with tuberculosis). The resulting maps reveal whether heavy activity on Twitter is correlated with large numbers of people having certain diseases. In this study, we focus on tuberculosis, human immunodeficiency virus (HIV), and malaria, since the World Health Organization ranks these diseases as the top three causes of death worldwide by a single infectious agent. The results of the social-spatial Twitter maps (and additionally performed regression models) reveal the usefulness of the proposed sensor approach. One receives an impression of how research papers on the diseases have been perceived by people in regions that are especially concerned by these diseases. Our study demonstrates a promising approach for using Twitter data for research evaluation purposes beyond simple counting of tweets. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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217. Disadvantages in preparing and publishing scientific papers caused by the dominance of the English language in science: The case of Colombian researchers in biological sciences.
- Author
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Ramírez-Castañeda, Valeria
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- *
SCIENCE publishing , *LANGUAGE ability , *LINGUISTICS , *SCIENTIFIC language , *ENGLISH language , *COMPUTER assisted language instruction - Abstract
The success of a scientist depends on their production of scientific papers and the impact factor of the journal in which they publish. Because most major scientific journals are published in English, success is related to publishing in this language. Currently, 98% of publications in science are written in English, including researchers from English as a Foreign Language (EFL) countries. Colombia is among the countries with the lowest English proficiency in the world. Thus, understanding the disadvantages that Colombians face in publishing is crucial to reducing global inequality in science. This paper quantifies the disadvantages that result from the language hegemony in scientific publishing by examining the additional costs that communicating in English creates in the production of articles. It was identified that more than 90% of the scientific articles published by Colombian researchers are in English, and that publishing in a second language creates additional financial costs to Colombian doctoral students and results in problems with reading comprehension, writing ease and time, and anxiety. Rejection or revision of their articles because of the English grammar was reported by 43.5% of the doctoral students, and 33% elected not to attend international conferences and meetings due to the mandatory use of English in oral presentations. Finally, among the translation/editing services reviewed, the cost per article is between one-quarter and one-half of a doctoral monthly salary in Colombia. Of particular note, we identified a positive correlation between English proficiency and higher socioeconomic origin of the researcher. Overall, this study exhibits the negative consequences of hegemony of English that preserves the global gap in science. Although having a common language is important for science communication, generating multilinguistic alternatives would promote diversity while conserving a communication channel. Such an effort should come from different actors and should not fall solely on EFL researchers. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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218. A tale of textiles: Genetic characterization of historical paper mulberry barkcloth from Oceania.
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Peña-Ahumada, Bárbara, Saldarriaga-Córdoba, Mónica, Kardailsky, Olga, Moncada, Ximena, Moraga, Mauricio, Matisoo-Smith, Elizabeth, Seelenfreund, Daniela, and Seelenfreund, Andrea
- Subjects
- *
MULBERRY , *HUMAN settlements , *FOSSIL DNA , *MICROSATELLITE repeats , *TEXTILES , *HERBARIA - Abstract
Humans introduced paper mulberry (Broussonetia papyrifera) from Taiwan into the Pacific over 5000 years ago as a fiber source to make barkcloth textiles that were, and still are, important cultural artifacts throughout the Pacific. We have used B. papyrifera, a species closely associated to humans, as a proxy to understand the human settlement of the Pacific Islands. We report the first genetic analysis of paper mulberry textiles from historical and archaeological contexts (200 to 50 years before present) and compare our results with genetic data obtained from contemporary and herbarium paper mulberry samples. Following stringent ancient DNA protocols, we extracted DNA from 13 barkcloth textiles. We confirmed that the fiber source is paper mulberry in nine of the 13 textiles studied using the nuclear ITS-1 marker and by statistical estimates. We detected high genetic diversity in historical Pacific paper mulberry barkcloth with a set of ten microsatellites, showing new alleles and specific genetic patterns. These genetic signatures allow tracing connections to plants from the Asian homeland, Near and Remote Oceania, establishing links not observed previously (using the same genetic tools) in extant plants or herbaria samples. These results show that historic barkcloth textiles are cultural materials amenable to genetic analysis to reveal human history and that these artifacts may harbor evidence of greater genetic diversity in Pacific B. papyrifera in the past. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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219. Effects of signalling tax evasion on redistribution and voting preferences: Evidence from the Panama Papers.
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Ait Bihi Ouali, Laila
- Subjects
- *
TAX evasion , *VOTER turnout , *INSECTICIDE-treated mosquito nets , *EVIDENCE , *INVESTIGATIONS - Abstract
This paper provides empirical evidence that individuals substantially revise their stated wealth redistribution preferences after fiscal scandals. The 2016 Panama Papers scandal revealed top-income tax evasion behaviour simultaneously worldwide. The empirical investigation exploits this event as a quasi-natural experiment. I rely on two original datasets, a UK household longitudinal dataset and a survey conducted in 22 European countries. I use a difference-in-differences strategy and find that pro-redistribution statements increased between 2% and 3.3% after the scandal. Responses are heterogeneous and larger for right-wing individuals and low-income individuals. This change in wealth redistribution preferences is likely to have been translated into a slight change in votes. The results suggest an increase in stated voting intentions for the left and a decrease for the right. Complementary estimations reveal that more media coverage and more individuals involved by country increase the magnitude of the response. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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220. Are quality assessments in science affected by anchoring effects? The proposal of a follow-up study.
- Author
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Bornmann, Lutz and Ganser, Christian
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ANCHORING effect ,SOCIAL order ,WEB databases ,SCIENCE databases ,BIBLIOMETRICS - Abstract
We plan to empirically study the assessment of scientific papers within the framework of the anchoring-and-adjustment heuristic. This study is a follow-up study which is intended to answer open questions from the previous study with the same topic Bornmann (2021) and Bornmann (2023). The previous and follow-up studies address a central question in research evaluation: does bibliometrics create the social order in science it is designed to measure or does bibliometrics reflect the given social order (which is dependent on the intrinsic quality of research)? If bibliometrics creates the social order, it can be interpreted as an anchoring-and-adjustment heuristic. In the planned study, we shall undertake a survey of corresponding authors with an available email address in the Web of Science database. The authors are asked to assess the quality of articles that they cited in previous papers. The authors are randomly assigned to different experimental settings in which they receive (or not) citation information or a numerical access code to enter the survey. The control group will not receive any further numerical information. In the statistical analyses, we estimate how (strongly) the quality assessments of the cited papers are adjusted by the respondents to the anchor value (citation counts or access code). Thus, we are interested in whether possible adjustments in the assessments can not only be produced by quality-related information (citation counts), but also by numbers that are not related to quality, i.e. the access code. Strong effects of the anchors would mean that bibliometrics (or any other number) create the social order they are supposed to measure. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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221. Smart greenhouse construction and irrigation control system for optimal Brassica Juncea development.
- Author
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Huynh, Hiep Xuan, Tran, Linh Nhut, and Duong-Trung, Nghia
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BRASSICA juncea ,GREENHOUSES ,ELECTRONIC paper ,IRRIGATION ,CROP management ,LIGHT intensity - Abstract
This paper contributes to smart greenhouses and IoT (Internet of Things) research. Our pioneering achievement centers on successfully designing, constructing, and testing a 30m
2 smart greenhouse, explicitly focusing on the cultivation and development of Brassica Juncea, a mustard variety commonly grown in Vietnam. The construction phase entailed the meticulous integration of diverse IoT technologies and systems, culminating in the creation of a finely tuned environment to meet the unique needs of Brassica Juncea cultivation. Notably, our research team has realized the physical infrastructure and developed and implemented a robust web interface. This interface empowers users to monitor and remotely control the smart greenhouse conveniently. It provides real-time visualization of critical parameters, including temperature, humidity, soil moisture, and light intensity, enabling precise monitoring and supporting informed decision-making in crop management. In addition to the web interface, we have meticulously designed and completed an Android mobile application, further enhancing accessibility and convenience. This mobile app allows users to monitor and control the smart greenhouse while on the move. It is imperative to underscore that this work marks a significant milestone as the first complete smart greenhouse IoT solution dedicated to developing Brassica Juncea. Our pioneering accomplishments not only advance the frontiers of innovative greenhouse and IoT research but also contribute substantially to the progress of intelligent agriculture. [ABSTRACT FROM AUTHOR]- Published
- 2023
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222. Counting Highly Cited Papers for University Research Assessment: Conceptual and Technical Issues.
- Author
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Rodríguez-Navarro, Alonso
- Subjects
RESEARCH ,SCIENTIFIC discoveries ,SCIENCE ,RESEARCH institutes ,REPORT writing ,UNIVERSITY & college research - Abstract
A Kuhnian approach to research assessment requires us to consider that the important scientific breakthroughs that drive scientific progress are infrequent and that the progress of science does not depend on normal research. Consequently, indicators of research performance based on the total number of papers do not accurately measure scientific progress. Similarly, those universities with the best reputations in terms of scientific progress differ widely from other universities in terms of the scale of investments made in research and in the higher concentrations of outstanding scientists present, but less so in terms of the total number of papers or citations. This study argues that indicators for the 1% high-citation tail of the citation distribution reveal the contribution of universities to the progress of science and provide quantifiable justification for the large investments in research made by elite research universities. In this tail, which follows a power low, the number of the less frequent and highly cited important breakthroughs can be predicted from the frequencies of papers in the upper part of the tail. This study quantifies the false impression of excellence produced by multinational papers, and by other types of papers that do not contribute to the progress of science. Many of these papers are concentrated in and dominate lists of highly cited papers, especially in lower-ranked universities. The h-index obscures the differences between higher- and lower-ranked universities because the proportion of h-core papers in the 1% high-citation tail is not proportional to the value of the h-index. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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223. Altered feeding behavior and immune competence in paper wasps: A case of parasite manipulation?
- Author
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Beani L, Mariotti Lippi M, Mulinacci N, Manfredini F, Cecchi L, Giuliani C, Tani C, Meriggi N, Cavalieri D, and Cappa F
- Subjects
- Animals, Anti-Bacterial Agents chemistry, Anti-Bacterial Agents isolation & purification, Bignoniaceae parasitology, Chromatography, High Pressure Liquid, Feeding Behavior drug effects, Glucosides chemistry, Glucosides isolation & purification, Immunity, Innate drug effects, Immunocompetence, Larva physiology, Male, Mass Spectrometry methods, Phenols chemistry, Phenols isolation & purification, Plant Nectar chemistry, Wasps drug effects, Wasps immunology, Anti-Bacterial Agents pharmacology, Glucosides pharmacology, Holometabola physiology, Host-Parasite Interactions, Phenols pharmacology, Wasps parasitology
- Abstract
Paper wasps (Polistes dominula), parasitized by the strepsipteran Xenos vesparum, are castrated and desert the colony to gather on plants where the parasite mates and releases primary larvae, thus completing its lifecycle. One of these plants is the trumpet creeper Campsis radicans: in a previous study the majority of all wasps collected from this plant were parasitized and focused their foraging activity on C. radicans buds. The unexpected prevalence and unusual feeding strategy prompted us to investigate the influence of this plant on wasp behavior and physiology through a multidisciplinary approach. First, in a series of laboratory bioassays, we observed that parasitized wasps spent more time than non-parasitized ones on fresh C. radicans buds, rich of extra-floral nectaries (EFNs), while the same wasps ignored treated buds that lacked nectar drops. Then, we described the structure and ultra-structure of EFNs secreting cells, compatible with the synthesis of phenolic compounds. Subsequently, we analysed extracts from different bud tissues by HPLC-DAD-MS and found that verbascoside was the most abundant bioactive molecule in those tissues rich in EFNs. Finally, we tested the immune-stimulant properties of verbascoside, as the biochemical nature of this compound indicates it might function as an antibacterial and antioxidant. We measured bacterial clearance in wasps, as a proxy for overall immune competence, and observed that it was enhanced after administration of verbascoside-even more so if the wasp was parasitized. We hypothesize that the parasite manipulates wasp behavior to preferentially feed on C. radicans EFNs, since the bioactive properties of verbascoside likely increase host survival and thus the parasite own fitness., Competing Interests: The authors have declared that no competing interests exist.
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- 2020
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224. Evaluating fomite risk of brown paper bags storing personal protective equipment exposed to SARS-CoV-2: A quasi-experimental study
- Author
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Kyirsty Unger, Leslie Dietz, Patrick Horve, Kevin Van Den Wymelenberg, Amber Lin, Erin Kinney, and Bory Kea
- Subjects
Multidisciplinary ,SARS-CoV-2 ,Fomites ,Health Personnel ,COVID-19 ,Humans ,Respiratory Aerosols and Droplets ,Personal Protective Equipment - Abstract
IntroductionLiterature is lacking on the safety of storing contaminated PPE in paper bags for reuse, potentially increasing exposure to frontline healthcare workers (HCW) and patients.ObjectivesTo evaluate the effectiveness of paper bags as a barrier for fomite transmission of SARS-CoV-2 by storing limited reusable face masks, respirators, and face shields.MethodsThis quasi-experimental study evaluated the presence of SARS-CoV-2 on the interior and exterior surfaces of paper bags containing PPE that had aerosolized exposures in clinical and simulated settings. Between May and October 2020, 30 unique PPE items were collected from critical and intermediate care COVID-19 units at two urban hospitals. Exposed PPE, worn by either an infected patient or HCW during a SARS-CoV-2 aerosolizing event, were placed into an unused brown paper bag. Samples were tested at 30-minute and 12-hour intervals.ResultsA total of 177 swabs were processed from 30 PPE samples. We found a (12/177 total) 6.8% positivity rate among all samples across both collection sites. Highest positivity rates were associated with ventilator disconnection (1/6 samples, 16.7% positivity) and exposure to respiratory droplets from coughing (2/24 samples, 8.3% positivity), compared to exposure to high-flow nasal cannula (8/129 samples, 6.2% positivity) or tracheostomy surgery (1/18 samples, 5.6% positivity). Positivity rates differed between hospital units. Total positivity rates were similar between 30-minute (6.7%) and 12-hour (6.9%) sample testing time intervals. Control samples exposed to inactivated SARS-CoV-2 droplets had higher total viral counts than samples exposed to nebulized aerosols.ConclusionsData suggests paper bags are not a significant fomite risk for SARS-CoV-2 transmission. However, controls demonstrated a risk with droplet exposure. Data can inform guidelines for storing and re-using PPE in situations of limited supplies during future pandemics.
- Published
- 2022
225. A stochastic generative model for citation networks among academic papers
- Author
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Yuichiro Yasui and Junji Nakano
- Subjects
Likelihood Functions ,Organizations ,Multidisciplinary ,Databases, Factual ,Physics ,Normal Distribution - Abstract
We propose a stochastic generative model to represent a directed graph constructed by citations among academic papers, where nodes and directed edges represent papers with discrete publication time and citations respectively. The proposed model assumes that a citation between two papers occurs with a probability based on the type of the citing paper, the importance of cited paper, and the difference between their publication times, like the existing models. We consider the out-degrees of citing paper as its type, because, for example, survey paper cites many papers. We approximate the importance of a cited paper by its in-degrees. In our model, we adopt three functions: a logistic function for illustrating the numbers of papers published in discrete time, an inverse Gaussian probability distribution function to express the aging effect based on the difference between publication times, and an exponential distribution (or a generalized Pareto distribution) for describing the out-degree distribution. We consider that our model is a more reasonable and appropriate stochastic model than other existing models and can perform complete simulations without using original data. In this paper, we first use the Web of Science database and see the features used in our model. By using the proposed model, we can generate simulated graphs and demonstrate that they are similar to the original data concerning the in- and out-degree distributions, and node triangle participation. In addition, we analyze two other citation networks derived from physics papers in the arXiv database and verify the effectiveness of the model.
- Published
- 2022
226. The Carbon Footprint of Conference Papers.
- Author
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Spinellis, Diomidis and Louridas, Panos
- Subjects
- *
ECOLOGICAL impact , *CONFERENCE papers , *ENVIRONMENTAL impact analysis , *SOCIAL impact , *CLIMATE change , *ENVIRONMENTAL economics , *ECONOMIC policy - Abstract
The action required to stem the environmental and social implications of climate change depends crucially on how humankind shapes technology, economy, lifestyle and policy. With transport CO2 emissions accounting for about a quarter of the total, we examine the contribution of CO2 output by scientific travel. Thankfully for the reputation of the scientific community, CO2 emissions associated with the trips required to present a paper at a scientific conference account for just 0.003% of the yearly total. However, with CO2 emissions for a single conference trip amounting to 7% of an average individual’s total CO2 emissions, scientists should lead by example by demonstrating leadership in addressing the issue. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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- View/download PDF
227. Comparison of the web-based and paper [corrected] questionnaires of the Spanish and Catalan versionsof the KIDSCREEN-52.
- Author
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Luis Rajmil, Noemí Robles, Dolors Rodriguez-Arjona, Marta Azuara, Francisco Codina, Hein Raat, and Ulrike Ravens-Sieberer
- Subjects
Medicine ,Science - Abstract
BackgroundThe objectives of the study were to develop web-based Spanish and Catalan versions of the KIDSCREEN, and to compare scores and psychometric properties with the paper version.MethodsInternet and paper Spanish and Catalan versions of the KIDSCREEN-52 were included in a cross-sectional study in school-age children. Web-based and paper Spanish or Catalan versions of the KIDSCREEN-52 were administered to students aged 8 to 18 years from primary and secondary schools in Palafolls (Barcelona, Spain, n = 923). All students completed both web-based and paper versions during school time with an interval of at least 2 hours between administrations. The order of administration was randomized. The KIDSCREEN-52, the Strengths and Difficulties Questionnaire (SDQ), and sociodemographic variables were collected. Missing values, floor and ceiling effects, and internal consistency were compared between both versions, as well as mean score differences, level of agreement, and known groups and construct validity.ResultsParticipation rate was 77% (n = 715). Web-based and paper versions showed low percentage of missing values and similar high ceiling effect (range 0 to 44%). Mean score differences showed an effect size (ES) lower than 0.2 in all dimensions. Internal consistency ranged from 0.7 to 0.88, and degree of agreement was excellent (Intraclass correlation coefficient [ICC] range 0.75 to 0.87). Expected differences were seen by sex, age, socioeconomic status and mental health status.ConclusionsThe web-based KIDSCREEN-52 showed similar scale score and reliability and validity than the paper version. It will incorporate the child population in the assessment of quality of life providing a more attractive format.
- Published
- 2014
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228. Does assessment type matter? A measurement invariance analysis of online and paper and pencil assessment of the Community Assessment of Psychic Experiences (CAPE).
- Author
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Marloes Vleeschouwer, Chris D Schubart, Cecile Henquet, Inez Myin-Germeys, Willemijn A van Gastel, Manon H J Hillegers, Jim J van Os, Marco P M Boks, and Eske M Derks
- Subjects
Medicine ,Science - Abstract
BackgroundThe psychometric properties of an online test are not necessarily identical to its paper and pencil original. The aim of this study is to test whether the factor structure of the Community Assessment of Psychic Experiences (CAPE) is measurement invariant with respect to online vs. paper and pencil assessment.MethodThe factor structure of CAPE items assessed by paper and pencil (N = 796) was compared with the factor structure of CAPE items assessed by the Internet (N = 21,590) using formal tests for Measurement Invariance (MI). The effect size was calculated by estimating the Signed Item Difference in the Sample (SIDS) index and the Signed Test Difference in the Sample (STDS) for a hypothetical subject who scores 2 standard deviations above average on the latent dimensions.ResultsThe more restricted Metric Invariance model showed a significantly worse fit compared to the less restricted Configural Invariance model (χ(2)(23) = 152.75, pConclusionsOur findings did not support measurement invariance with respect to assessment method. Because of the small effect sizes, the measurement differences between the online assessed CAPE and its paper and pencil original can be neglected without major consequences for research purposes. However, a person with a high vulnerability for psychotic symptoms would score 4.80 points lower on the total scale if the CAPE is assessed online compared to paper and pencil assessment. Therefore, for clinical purposes, one should be cautious with online assessment of the CAPE.
- Published
- 2014
- Full Text
- View/download PDF
229. De Novo assembly of expressed transcripts and global transcriptomic analysis from seedlings of the paper mulberry (Broussonetia kazinoki x Broussonetia papyifera).
- Author
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Peng Xianjun, Teng Linhong, Wang Xiaoman, Wang Yucheng, and Shen Shihua
- Subjects
Medicine ,Science - Abstract
The paper mulberry is one of the multifunctional tree species in agroforestry systems and is also commonly utilized in traditional medicine in China and other Asian countries. However, little is known about its molecular genetics, which hinders research on and exploitation of this valuable resource. To discern the correlation between gene expression and the essential properties of the paper mulberry, we performed a transcriptomics analysis, assembling a total of 37,725 unigenes from 54,638,676 reads generated by RNA-seq. Among these, 22,692 unigenes showed greater than 60% similarity with genes from other species. The lengths of 13,566 annotated unigenes were longer than 1,000 bp. Functional clustering analysis with COG (Cluster of Orthologous Groups) revealed that 17,184 unigenes are primarily involved in transcription, translation, signal transduction, carbohydrate metabolism, secondary metabolism, and energy metabolism. GO (Gene Ontology) annotation suggests enrichment of genes encoding antioxidant activity, transporter activity, biosynthesis, metabolism and stress response, with a total of 30,659 unigenes falling in these categories. KEGG (Kyoto Encyclopedia of Genes and Genomes) metabolic pathway analysis showed that 7,199 unigenes are associated with 119 metabolic pathways. In addition to the basic metabolism, these genes are enriched for plant pathogen interaction, flavonoid metabolism and other secondary metabolic processes. Furthermore, differences in the transcriptomes of leaf, stem and root tissues were analyzed and 7,233 specifically expressed unigenes were identified. This global expression analysis provided novel insights about the molecular mechanisms of the biosynthesis of flavonoid, lignin and cellulose, as well as on the response to biotic and abiotic stresses including the remediation of contaminated soil by the paper mulberry.
- Published
- 2014
- Full Text
- View/download PDF
230. Efficiencies of Internet-based digital and paper-based scientific surveys and the estimated costs and time for different-sized cohorts.
- Author
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Constantin E Uhlig, Berthold Seitz, Nicole Eter, Julia Promesberger, and Holger Busse
- Subjects
Medicine ,Science - Abstract
AimsTo evaluate the relative efficiencies of five Internet-based digital and three paper-based scientific surveys and to estimate the costs for different-sized cohorts.MethodsInvitations to participate in a survey were distributed via e-mail to employees of two university hospitals (E1 and E2) and to members of a medical association (E3), as a link placed in a special text on the municipal homepage regularly read by the administrative employees of two cities (H1 and H2), and paper-based to workers at an automobile enterprise (P1) and college (P2) and senior (P3) students. The main parameters analyzed included the numbers of invited and actual participants, and the time and cost to complete the survey. Statistical analysis was descriptive, except for the Kruskal-Wallis-H-test, which was used to compare the three recruitment methods. Cost efficiencies were compared and extrapolated to different-sized cohorts.ResultsThe ratios of completely answered questionnaires to distributed questionnaires were between 81.5% (E1) and 97.4% (P2). Between 6.4% (P1) and 57.0% (P2) of the invited participants completely answered the questionnaires. The costs per completely answered questionnaire were $0.57-$1.41 (E1-3), $1.70 and $0.80 for H1 and H2, respectively, and $3.36-$4.21 (P1-3). Based on our results, electronic surveys with 10, 20, 30, or 42 questions would be estimated to be most cost (and time) efficient if more than 101.6-225.9 (128.2-391.7), 139.8-229.2 (93.8-193.6), 165.8-230.6 (68.7-115.7), or 188.2-231.5 (44.4-72.7) participants were required, respectively.ConclusionsThe study efficiency depended on the technical modalities of the survey methods and engagement of the participants. Depending on our study design, our results suggest that in similar projects that will certainly have more than two to three hundred required participants, the most efficient way of conducting a questionnaire-based survey is likely via the Internet with a digital questionnaire, specifically via a centralized e-mail.
- Published
- 2014
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231. The citation wake of publications detects nobel laureates' papers.
- Author
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David F Klosik and Stefan Bornholdt
- Subjects
Medicine ,Science - Abstract
For several decades, a leading paradigm of how to quantitatively assess scientific research has been the analysis of the aggregated citation information in a set of scientific publications. Although the representation of this information as a citation network has already been coined in the 1960s, it needed the systematic indexing of scientific literature to allow for impact metrics that actually made use of this network as a whole, improving on the then prevailing metrics that were almost exclusively based on the number of direct citations. However, besides focusing on the assignment of credit, the paper citation network can also be studied in terms of the proliferation of scientific ideas. Here we introduce a simple measure based on the shortest-paths in the paper's in-component or, simply speaking, on the shape and size of the wake of a paper within the citation network. Applied to a citation network containing Physical Review publications from more than a century, our approach is able to detect seminal articles which have introduced concepts of obvious importance to the further development of physics. We observe a large fraction of papers co-authored by Nobel Prize laureates in physics among the top-ranked publications.
- Published
- 2014
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- View/download PDF
232. Loop mediated isothermal amplification (LAMP) accurately detects malaria DNA from filter paper blood samples of low density parasitaemias.
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Berit Aydin-Schmidt, Weiping Xu, Iveth J González, Spencer D Polley, David Bell, Delér Shakely, Mwinyi I Msellem, Anders Björkman, and Andreas Mårtensson
- Subjects
Medicine ,Science - Abstract
Loop mediated isothermal amplification (LAMP) provides an opportunity for improved, field-friendly detection of malaria infections in endemic areas. However data on the diagnostic accuracy of LAMP for active case detection, particularly low-density parasitaemias, are lacking. We therefore evaluated the performance of a new LAMP kit compared with PCR using DNA from filter paper blood spots.Samples from 865 fever patients and 465 asymptomatic individuals collected in Zanzibar were analysed for Pan (all species) and Pf (P. falciparum) DNA with the Loopamp MALARIA Pan/Pf kit. Samples were amplified at 65°C for 40 minutes in a real-time turbidimeter and results were compared with nested PCR. Samples with discordant results between LAMP and nested PCR were analysed with real-time PCR. The real-time PCR corrected nested PCR result was defined as gold standard. Among the 117 (13.5%) PCR detected P. falciparum infections from fever patients (mean parasite density 7491/µL, range 6-782,400) 115, 115 and 111 were positive by Pan-LAMP, Pf-LAMP and nested PCR, respectively. The sensitivities were 98.3% (95%CI 94-99.8) for both Pan and Pf-LAMP. Among the 54 (11.6%) PCR positive samples from asymptomatic individuals (mean parasite density 10/µL, range 0-4972) Pf-LAMP had a sensitivity of 92.7% (95%CI 80.1-98.5) for detection of the 41 P. falciparum infections. Pan-LAMP had sensitivities of 97% (95%CI 84.2-99.9) and 76.9% (95%CI 46.2-95) for detection of P. falciparum and P. malariae, respectively. The specificities for both Pan and Pf-LAMP were 100% (95%CI 99.1-100) in both study groups.Both components of the Loopamp MALARIA Pan/Pf detection kit revealed high diagnostic accuracy for parasite detection among fever patients and importantly also among asymptomatic individuals of low parasite densities from minute blood volumes preserved on filter paper. These data support LAMPs potential role for improved detection of low-density malaria infections in pre-elimination settings.
- Published
- 2014
- Full Text
- View/download PDF
233. Exposure to paper mill effluent at a site in North Central Florida elicits molecular-level changes in gene expression indicative of progesterone and androgen exposure.
- Author
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Erica K Brockmeier, B Sumith Jayasinghe, William E Pine, Krystan A Wilkinson, and Nancy D Denslow
- Subjects
Medicine ,Science - Abstract
Endocrine disrupting compounds (EDCs) are chemicals that negatively impact endocrine system function, with effluent from paper mills one example of this class of chemicals. In Florida, female Eastern mosquitofish (Gambusia holbrooki) have been observed with male secondary sexual characteristics at three paper mill-impacted sites, indicative of EDC exposure, and are still found at one site on the Fenholloway River. The potential impacts that paper mill effluent exposure has on the G. holbrooki endocrine system and the stream ecosystem are unknown. The objective of this study was to use gene expression analysis to determine if exposure to an androgen receptor agonist was occurring and to couple this analysis with in vitro assays to evaluate the presence of androgen and progesterone receptor active chemicals in the Fenholloway River. Focused gene expression analyses of masculinized G. holbrooki from downstream of the Fenholloway River paper mill were indicative of androgen exposure, while genes related to reproduction indicated potential progesterone exposure. Hepatic microarray analysis revealed an increase in the expression of metabolic genes in Fenholloway River fish, with similarities in genes and biological processes compared to G. holbrooki exposed to androgens. Water samples collected downstream of the paper mill and at a reference site indicated that progesterone and androgen receptor active chemicals were present at both sites, which corroborates previous chemical analyses. Results indicate that G. holbrooki downstream of the Fenholloway River paper mill are impacted by a mixture of both androgens and progesterones. This research provides data on the mechanisms of how paper mill effluents in Florida are acting as endocrine disruptors.
- Published
- 2014
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- View/download PDF
234. Evaluation of dried blood spots collected on filter papers from three manufacturers stored at ambient temperature for application in HIV-1 drug resistance monitoring.
- Author
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Erin K Rottinghaus, R Suzanne Beard, Ebi Bile, Mosetsanagape Modukanele, Maruping Maruping, Madisa Mine, John Nkengasong, and Chunfu Yang
- Subjects
Medicine ,Science - Abstract
As more HIV-infected people gain access to antiretroviral therapy (ART), monitoring HIV drug resistance (HIVDR) becomes essential to combat both acquired and transmitted HIVDR. Studies have demonstrated dried blood spots (DBS) are a suitable alternative in HIVDR monitoring using DBS collected on Whatman 903 (W-903). In this study, we sought to evaluate two other commercially available filter papers, Ahlstrom 226 (A-226) and Munktell TFN (M-TFN), for HIVDR genotyping following ambient temperature storage. DBS were prepared from remnant blood specimens collected from 334 ART patients and stored at ambient temperature for a median time of 30 days. HIV-1 viral load was determined using NucliSENS EasyQ® HIV-1 v2.0 RUO test kits prior to genotyping of the protease and reverse transcriptase regions of the HIV-1 pol gene using an in-house assay. Among the DBS tested, 26 specimens had a viral load ≥ 1000 copies/mL in all three types of filter paper and were included in the genotyping analysis. Genotyping efficiencies were similar between DBS collected on W-903 (92.3%), A-226 (88.5%), and M-TFN (92.3%) filter papers (P = 1.00). We identified 50 DR-associated mutations in DBS collected on W-903, 33 in DBS collected on A-226, and 48 in DBS collected on M-TFN, resulting in mutation detection sensitivities of 66.0% for A-226 and 88.0% for M-TFN when compared to W-903. Our data indicate that differences among filter papers may exist at this storage condition and warrant further studies evaluating filter paper type for HIVDR monitoring.
- Published
- 2014
- Full Text
- View/download PDF
235. Holding thermal receipt paper and eating food after using hand sanitizer results in high serum bioactive and urine total levels of bisphenol A (BPA).
- Author
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Annette M Hormann, Frederick S Vom Saal, Susan C Nagel, Richard W Stahlhut, Carol L Moyer, Mark R Ellersieck, Wade V Welshons, Pierre-Louis Toutain, and Julia A Taylor
- Subjects
Medicine ,Science - Abstract
Bisphenol A (BPA) is an endocrine disrupting environmental contaminant used in a wide variety of products, and BPA metabolites are found in almost everyone's urine, suggesting widespread exposure from multiple sources. Regulatory agencies estimate that virtually all BPA exposure is from food and beverage packaging. However, free BPA is applied to the outer layer of thermal receipt paper present in very high (∼20 mg BPA/g paper) quantities as a print developer. Not taken into account when considering thermal paper as a source of BPA exposure is that some commonly used hand sanitizers, as well as other skin care products, contain mixtures of dermal penetration enhancing chemicals that can increase by up to 100 fold the dermal absorption of lipophilic compounds such as BPA. We found that when men and women held thermal receipt paper immediately after using a hand sanitizer with penetration enhancing chemicals, significant free BPA was transferred to their hands and then to French fries that were eaten, and the combination of dermal and oral BPA absorption led to a rapid and dramatic average maximum increase (Cmax) in unconjugated (bioactive) BPA of ∼7 ng/mL in serum and ∼20 µg total BPA/g creatinine in urine within 90 min. The default method used by regulatory agencies to test for hazards posed by chemicals is intra-gastric gavage. For BPA this approach results in less than 1% of the administered dose being bioavailable in blood. It also ignores dermal absorption as well as sublingual absorption in the mouth that both bypass first-pass liver metabolism. The elevated levels of BPA that we observed due to holding thermal paper after using a product containing dermal penetration enhancing chemicals have been related to an increased risk for a wide range of developmental abnormalities as well as diseases in adults.
- Published
- 2014
- Full Text
- View/download PDF
236. Citizen-led sampling to monitor phosphate levels in freshwater environments using a simple paper microfluidic device.
- Author
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Richardson, Samantha, Iles, Alexander, Rotchell, Jeanette M., Charlson, Tim, Hanson, Annabel, Lorch, Mark, and Pamme, Nicole
- Subjects
MICROFLUIDIC devices ,PLASTIC marine debris ,PHOSPHATES ,FRESH water ,SMARTPHONES ,CHEMICAL systems ,AGRICULTURAL chemicals - Abstract
Contamination of waterways is of increasing concern, with recent studies demonstrating elevated levels of antibiotics, antidepressants, household, agricultural and industrial chemicals in freshwater systems. Thus, there is a growing demand for methods to rapidly and conveniently monitor contaminants in waterways. Here we demonstrate how a combination of paper microfluidic devices and handheld mobile technology can be used by citizen scientists to carry out a sustained water monitoring campaign. We have developed a paper-based analytical device and a 3 minute sampling workflow that requires no more than a container, a test device and a smartphone app. The contaminant measured in these pilots are phosphates, detectable down to 3 mg L
-1 . Together these allow volunteers to successfully carry out cost-effective, high frequency, phosphate monitoring over an extended geographies and periods. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
237. De Novo Assembly of Expressed Transcripts and Global Transcriptomic Analysis from Seedlings of the Paper Mulberry (Broussonetia kazinoki x Broussonetia papyifera).
- Author
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Xianjun, Peng, Linhong, Teng, Xiaoman, Wang, Yucheng, Wang, and Shihua, Shen
- Subjects
GENE expression in plants ,PAPER mulberry ,SEEDLINGS ,PLANT species ,PLANT genetics ,GENETIC transcription in plants - Abstract
The paper mulberry is one of the multifunctional tree species in agroforestry systems and is also commonly utilized in traditional medicine in China and other Asian countries. However, little is known about its molecular genetics, which hinders research on and exploitation of this valuable resource. To discern the correlation between gene expression and the essential properties of the paper mulberry, we performed a transcriptomics analysis, assembling a total of 37,725 unigenes from 54,638,676 reads generated by RNA-seq. Among these, 22,692 unigenes showed greater than 60% similarity with genes from other species. The lengths of 13,566 annotated unigenes were longer than 1,000 bp. Functional clustering analysis with COG (Cluster of Orthologous Groups) revealed that 17,184 unigenes are primarily involved in transcription, translation, signal transduction, carbohydrate metabolism, secondary metabolism, and energy metabolism. GO (Gene Ontology) annotation suggests enrichment of genes encoding antioxidant activity, transporter activity, biosynthesis, metabolism and stress response, with a total of 30,659 unigenes falling in these categories. KEGG (Kyoto Encyclopedia of Genes and Genomes) metabolic pathway analysis showed that 7,199 unigenes are associated with 119 metabolic pathways. In addition to the basic metabolism, these genes are enriched for plant pathogen interaction, flavonoid metabolism and other secondary metabolic processes. Furthermore, differences in the transcriptomes of leaf, stem and root tissues were analyzed and 7,233 specifically expressed unigenes were identified. This global expression analysis provided novel insights about the molecular mechanisms of the biosynthesis of flavonoid, lignin and cellulose, as well as on the response to biotic and abiotic stresses including the remediation of contaminated soil by the paper mulberry. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
238. Within-subject variation of C-reactive protein and high-sensitivity C-reactive protein: A systematic review and meta-analysis.
- Author
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Gough, Alex, Sitch, Alice, Ferris, Erica, and Marshall, Tom
- Subjects
C-reactive protein ,INTRACLASS correlation ,DATA extraction ,DATA integrity ,DATABASE searching - Abstract
Background: C-reactive protein (CRP) and high-sensitivity C-reactive protein (hsCRP) are measures of inflammation used in diagnosis, to guide treatment decisions, and in disease prediction. Variability in measured CRP and hsCRP may affect their clinical utility but estimates of within-subject variability are based on limited data. Methods: A systematic review and meta-analysis was performed to estimate longitudinal within-subject variability of CRP and hsCRP over any time period. Follow-up studies of any design in adults or children, with repeated measures of CRP or hsCRP were sought. Multiple databases were searched from inception to November 2022. Titles and abstracts were screened in duplicate. Full text screening and data extraction were performed by one reviewer and verified by a second. Risk of bias was assessed with a modified Consensus-based Standards for the Selection of Health Measurement Instruments (COSMIN) tool. Intraclass correlation coefficient (ICC) results were pooled with a meta-analysis and coefficient of variation (CV) results were described by median and range. Results: Of 2675 studies identified, 60 met the inclusion criteria: 34 reported CRP and 26 reported hsCRP. For CRP, median CV was 0.41 (range 0.11 to 0.89), and the pooled estimate of ICC was 0.55 (95% CI 0.35 to 0.74). For hsCRP, median CV was 0.44 (range 0.27 to 0.76) and the pooled estimate of ICC was 0.62 (95% CI 0.58 to 0.67). Limitations: Assessment of variability was not the main aim of many of the included papers, and it is possible that some relevant papers have been missed. Many of the papers included had low numbers of participants and/or low numbers of repeated measurements. Conclusions: Estimated within-subject variability is high for both CRP and hsCRP, but estimates are based on small numbers of participants and measurements. There is a need for better estimates of within-subject variability from analysis of larger numbers of repeated measurements in larger numbers of subjects. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
239. Non-pharmacological delirium detection and management interventions for informal caregivers of older people at home: A scoping review protocol.
- Author
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Fox, Mary T., Maimets, Ilo-Katryn, Butler, Jeffrey I., Sidani, Souraya, and Godfrey, Christina
- Subjects
TRANSITIONAL care ,CAREGIVERS ,OLD age homes ,CINAHL database ,CHRONIC diseases ,FRAIL elderly - Abstract
Objective: The objective of this proposed scoping review is to identify and map the available evidence on interventions that aim to help informal caregivers identify and/or manage delirium in an older person at home. Introduction: Delirium is a neurocognitive condition characterized by acute confusion and is associated with increased risk of morbidity and mortality. Research estimates delirium to be present in 17% of community-dwellers aged 85 and older, increasing proportionally with age to 45% in those aged 90 and older. Delirium often occurs at the onset of an older person's acute illness or exacerbation of a chronic illness (sometimes while at home) and, because of its protracted nature, usually continues after a hospital stay. Even when an older person's delirium resolves during hospitalization, they remain at risk of its recurrence after discharge home. Consequently, knowing how to detect and manage delirium is critical for informal caregivers of older people at home. However, there are no reviews focused exclusively on this topic in this setting. Inclusion criteria: The population of interest includes informal caregivers of a person aged 65+. Concepts of interest include delirium detection and/or management interventions. The context of interest is any setting where informal care is delivered, including the transition from hospital to home, in any geographical area. Materials and methods: The review will be conducted according to the JBI guidelines for scoping reviews. A three-step search strategy will be used to locate both published and unpublished papers in MEDLINE, Embase, CINAHL, PsycINFO, Web of Science Core Collection, ProQuest Nursing & Allied Health, SCOPUS, LILACS, and SciELO, PQD&T, NDLTD, Google Scholar and Google. No language restrictions will be placed on the review. Papers will be screened for eligibility at the title, abstract, and full text level by two independent reviewers. Data will be extracted by two independent reviewers and managed in Covidence. Any disagreements in screening or data extraction will be resolved by consensus or a third reviewer. Results will be summarised in narrative and tabular formats. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
240. More online interaction, more stock liquidity:——Evidence from Chinese stock exchange online interaction platform.
- Author
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Zhang, Kun, Hu, Zhenyi, Shen, Jianfei, and Wang, Yuanyuan
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NEW business enterprises ,INVESTORS ,INSTITUTIONAL investors ,INSTITUTIONAL ownership (Stocks) ,CORPORATE governance - Abstract
This paper investigates the impact of online interaction between investors and enterprises on stock liquidity, using data from A-share listed companies in China from 2010 to 2021. Firstly, our findings reveal that more frequent interaction leads to better stock liquidity, and this result remains consistent across various robustness tests. Secondly, we observe that the expected tenure of senior executives and the ratio of institutional investor ownership exert a significant moderating effect on this relationship. Thirdly, this effect varies across enterprises at different development stages and with different ownership structures, being more pronounced in growing and privately-owned companies. Furthermore, this paper finds an inverted U-shaped relationship between reply length and stock liquidity, indicating that excessively long replies may introduce noise and negatively affect liquidity. This study provides new insights into how online interactions can improve market efficiency and offers practical implications for corporate governance and investor relations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
241. Handling of thermal paper: Implications for dermal exposure to bisphenol A and its alternatives
- Author
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Laura N. Vandenberg and Meghan R. Bernier
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0301 basic medicine ,Bisphenol A ,Physiology ,lcsh:Medicine ,Hands ,Endocrine Disruptors ,010501 environmental sciences ,Toxicology ,Pathology and Laboratory Medicine ,Mechanical Treatment of Specimens ,01 natural sciences ,Dermal exposure ,chemistry.chemical_compound ,Medicine and Health Sciences ,lcsh:Science ,Musculoskeletal System ,Skin ,education.field_of_study ,Multidisciplinary ,Phenols toxicity ,Environmental exposure ,Chemical Disruption ,Chemical used ,Toxicokinetics ,3. Good health ,Arms ,Physiological Parameters ,Specimen Disruption ,Research Design ,Observational Studies ,Anatomy ,Integumentary System ,Research Article ,Paper ,Population ,Absorption (skin) ,Research and Analysis Methods ,Fingers ,03 medical and health sciences ,Phenols ,Humans ,Benzhydryl Compounds ,education ,0105 earth and related environmental sciences ,Behavior ,Limbs (Anatomy) ,Body Weight ,lcsh:R ,Biology and Life Sciences ,Environmental Exposure ,Thermal paper ,030104 developmental biology ,chemistry ,Specimen Preparation and Treatment ,Environmental science ,lcsh:Q - Abstract
Bisphenol A (BPA) is an endocrine disrupting chemical used in a wide range of consumer products including photoactive dyes used in thermal paper. Recent studies have shown that dermal absorption of BPA can occur when handling these papers. Yet, regulatory agencies have largely dismissed thermal paper as a major source of BPA exposure. Exposure estimates provided by agencies such as the European Food Safety Authority (EFSA) are based on assumptions about how humans interact with this material, stating that ‘typical’ exposures for adults involve only one handling per day for short periods of time (30% of individuals hold thermal paper with more than three fingertips, and >60% allow the paper to touch their palm. Only 11% of the participants we observed were consistent with the EFSA model for time of contact and dermal surface area. Mathematical modeling based on handling times we measured and previously published transfer coefficients, concentrations of BPA in paper, and absorption factors indicate the most conservative estimated intake from handling thermal paper in this population is 51.1 ng/kg/day, similar to EFSA’s estimates of 59 ng/kg/day from dermal exposures. Less conservative estimates, using published data on concentrations in thermal paper and transfer rates to skin, indicate that exposures are likely significantly higher. Based on our observational data, we propose that the current models for estimating dermal BPA exposures are not consistent with normal human behavior and should be reevaluated.
- Published
- 2017
242. A laboratory-based study to explore the use of honey-impregnated cards to detect chikungunya virus in mosquito saliva.
- Author
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Fourniol, Lisa, Madec, Yoann, Mousson, Laurence, Vazeille, Marie, and Failloux, Anna-Bella
- Subjects
MOSQUITOES ,CHIKUNGUNYA virus ,AEDES aegypti ,AEDES albopictus ,SALIVA ,FILTER paper ,MOSQUITO control ,MOSQUITO vectors - Abstract
Mosquito control is implemented when arboviruses are detected in patients or in field-collected mosquitoes. However, mass screening of mosquitoes is usually laborious and expensive, requiring specialized expertise and equipment. Detection of virus in mosquito saliva using honey-impregnated filter papers seems to be a promising method as it is non-destructive and allows monitoring the viral excretion dynamics over time from the same mosquito. Here we test the use of filter papers to detect chikungunya virus in mosquito saliva in laboratory conditions, before proposing this method in large-scale mosquito surveillance programs. We found that 0.9 cm
2 cards impregnated with a 50% honey solution could replace the forced salivation technique as they offered a viral RNA detection until 7 days after oral infection of Aedes aegypti and Aedes albopictus mosquitoes with CHIKV. [ABSTRACT FROM AUTHOR]- Published
- 2021
- Full Text
- View/download PDF
243. Quantitative differences in nourishment affect caste-related physiology and development in the paper wasp Polistes metricus.
- Author
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Timothy M Judd, Peter E A Teal, Edgar Javier Hernandez, Talbia Choudhury, and James H Hunt
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Medicine ,Science - Abstract
The distinction between worker and reproductive castes of social insects is receiving increased attention from a developmental rather than adaptive perspective. In the wasp genus Polistes, colonies are founded by one or more females, and the female offspring that emerge in that colony are either non-reproducing workers or future reproductives of the following generation (gynes). A growing number of studies now indicate that workers emerge with activated reproductive physiology, whereas the future reproductive gynes do not. Low nourishment levels for larvae during the worker-rearing phase of the colony cycle and higher nourishment levels for larvae when gynes are reared are now strongly suspected of playing a major role in this difference. Here, we present the results of a laboratory rearing experiment in which Polistes metricus single foundresses were held in environmental conditions with a higher level of control than in any previously published study, and the amount of protein nourishment made available to feed larvae was the only input variable. Three experimental feeding treatments were tested: restricted, unrestricted, and hand-supplemented. Analysis of multiple response variables shows that wasps reared on restricted protein nourishment, which would be the case for wasps reared in field conditions that subsequently become workers, tend toward trait values that characterize active reproductive physiology. Wasps reared on unrestricted and hand-supplemented protein, which replicates higher feeding levels for larvae in field conditions that subsequently become gynes, tend toward trait values that characterize inactive reproductive physiology. Although the experiment was not designed to test for worker behavior per se, our results further implicate activated reproductive physiology as a developmental response to low larval nourishment as a fundamental aspect of worker behavior in Polistes.
- Published
- 2015
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- View/download PDF
244. Correction: Characterizing social media metrics of scholarly papers: the effect of document properties and collaboration patterns.
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Stefanie Haustein, Rodrigo Costas, and Vincent Larivière
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Medicine ,Science - Published
- 2015
- Full Text
- View/download PDF
245. A protocol paper for the MOTION Study—A longitudinal study in a cohort aged 60 years and older to obtain mechanistic knowledge of the role of the gut microbiome during normal healthy ageing in order to develop strategies that will improve lifelong health and wellbeing
- Author
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Sarah Phillips, Rachel Watt, Thomas Atkinson, Shelina Rajan, Antonietta Hayhoe, George M. Savva, Michael Hornberger, Ben J. L. Burton, Janak Saada, Melissa Cambell-Kelly, Simon Rushbrook, and Simon R. Carding
- Subjects
Cohort Studies ,Healthy Aging ,Multidisciplinary ,Humans ,Longitudinal Studies ,Prospective Studies ,Middle Aged ,Aged ,Gastrointestinal Microbiome - Abstract
Background Advances in medicine and public health mean that people are living longer; however, a significant proportion of that increased lifespan is spent in a prolonged state of declining health and wellbeing which places increasing pressure on medical, health and social services. There is a social and economic need to develop strategies to prevent or delay age-related disease and maintain lifelong health. Several studies have suggested links between the gut microbiome and age-related disease, which if confirmed would present a modifiable target for intervention development. The MOTION study aims to determine whether and how changes in the gut microbiome are associated with physical and mental capacity. A comprehensive longitudinal multiparameter study such as this has not been previously undertaken. Methods MOTION is a longitudinal prospective cohort study with a focus on gut health and cognitive function. 360 healthy individuals aged 60 years and older, living in East Anglia, UK will be recruited to the study, stratified into one of three risk groups (cohorts) for developing dementia based on their cognitive function. Participants will attend study appointments every six months over four years, providing stool and blood samples and a health questionnaire. Participants will also undergo physical measurements and cognitive tests at alternating appointments, and undergo Optical Coherence Tomography scans at 3 timepoints. Two subgroups of participants in the study will provide colonic tissue biopsies (n = ≥30 from each cohort), and brain imaging (n = 30) at two timepoints. Discussion This study will provide new insights into the gut-(microbiota)-brain axis and the relationship between age-associated changes in gut microbe populations and cognitive health. Such insights could help develop new microbe-based strategies to improve lifelong health and wellbeing. Trial registration This study is registered in the ClinicalTrials.gov Database with ID: NCT04199195 Registered: May 14, 2019.
- Published
- 2022
246. Epilepsy detection based on multi-head self-attention mechanism.
- Author
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Ru, Yandong, An, Gaoyang, Wei, Zheng, and Chen, Hongming
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CONVOLUTIONAL neural networks ,EPILEPSY ,SIGNAL detection ,STIMULUS generalization ,TRANSFORMER models ,FOURIER transforms ,COMPUTATIONAL neuroscience - Abstract
CNN has demonstrated remarkable performance in EEG signal detection, yet it still faces limitations in terms of global perception. Additionally, due to individual differences in EEG signals, the generalization ability of epilepsy detection models is week. To address this issue, this paper presents a cross-patient epilepsy detection method utilizing a multi-head self-attention mechanism. This method first utilizes Short-Time Fourier Transform (STFT) to transform the original EEG signals into time-frequency features, then models local information using Convolutional Neural Network (CNN), subsequently captures global dependency relationships between features using the multi-head self-attention mechanism of Transformer, and finally performs epilepsy detection using these features. Meanwhile, this model employs a light multi-head attention mechanism module with an alternating structure, which can comprehensively extract multi-scale features while significantly reducing computational costs. Experimental results on the CHB-MIT dataset show that the proposed model achieves accuracy, sensitivity, specificity, F1 score, and AUC of 92.89%, 96.17%, 92.99%, 94.41%, and 96.77%, respectively. Compared to the existing methods, the method proposed in this paper obtains better performance along with better generalization. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
247. Holding thermal receipt paper and eating food after using hand sanitizer results in high serum bioactive and urine total levels of bisphenol A (BPA).
- Author
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Hormann AM, Vom Saal FS, Nagel SC, Stahlhut RW, Moyer CL, Ellersieck MR, Welshons WV, Toutain PL, and Taylor JA
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- Adult, Benzhydryl Compounds urine, Eating, Endocrine Disruptors urine, Female, Hand Disinfection, Hand Sanitizers chemistry, Humans, Male, Paper, Phenols urine, Skin Absorption, Young Adult, Benzhydryl Compounds blood, Endocrine Disruptors blood, Environmental Exposure, Phenols blood
- Abstract
Bisphenol A (BPA) is an endocrine disrupting environmental contaminant used in a wide variety of products, and BPA metabolites are found in almost everyone's urine, suggesting widespread exposure from multiple sources. Regulatory agencies estimate that virtually all BPA exposure is from food and beverage packaging. However, free BPA is applied to the outer layer of thermal receipt paper present in very high (∼20 mg BPA/g paper) quantities as a print developer. Not taken into account when considering thermal paper as a source of BPA exposure is that some commonly used hand sanitizers, as well as other skin care products, contain mixtures of dermal penetration enhancing chemicals that can increase by up to 100 fold the dermal absorption of lipophilic compounds such as BPA. We found that when men and women held thermal receipt paper immediately after using a hand sanitizer with penetration enhancing chemicals, significant free BPA was transferred to their hands and then to French fries that were eaten, and the combination of dermal and oral BPA absorption led to a rapid and dramatic average maximum increase (Cmax) in unconjugated (bioactive) BPA of ∼7 ng/mL in serum and ∼20 µg total BPA/g creatinine in urine within 90 min. The default method used by regulatory agencies to test for hazards posed by chemicals is intra-gastric gavage. For BPA this approach results in less than 1% of the administered dose being bioavailable in blood. It also ignores dermal absorption as well as sublingual absorption in the mouth that both bypass first-pass liver metabolism. The elevated levels of BPA that we observed due to holding thermal paper after using a product containing dermal penetration enhancing chemicals have been related to an increased risk for a wide range of developmental abnormalities as well as diseases in adults.
- Published
- 2014
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- View/download PDF
248. Efficiencies of Internet-based digital and paper-based scientific surveys and the estimated costs and time for different-sized cohorts.
- Author
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Uhlig CE, Seitz B, Eter N, Promesberger J, and Busse H
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- Adolescent, Adult, Aged, Cohort Studies, Demography, Electronic Mail, Female, Hospitals, University, Humans, Internet, Male, Middle Aged, Paper, Postal Service, Surveys and Questionnaires, Young Adult, Data Collection economics
- Abstract
Aims: To evaluate the relative efficiencies of five Internet-based digital and three paper-based scientific surveys and to estimate the costs for different-sized cohorts., Methods: Invitations to participate in a survey were distributed via e-mail to employees of two university hospitals (E1 and E2) and to members of a medical association (E3), as a link placed in a special text on the municipal homepage regularly read by the administrative employees of two cities (H1 and H2), and paper-based to workers at an automobile enterprise (P1) and college (P2) and senior (P3) students. The main parameters analyzed included the numbers of invited and actual participants, and the time and cost to complete the survey. Statistical analysis was descriptive, except for the Kruskal-Wallis-H-test, which was used to compare the three recruitment methods. Cost efficiencies were compared and extrapolated to different-sized cohorts., Results: The ratios of completely answered questionnaires to distributed questionnaires were between 81.5% (E1) and 97.4% (P2). Between 6.4% (P1) and 57.0% (P2) of the invited participants completely answered the questionnaires. The costs per completely answered questionnaire were $0.57-$1.41 (E1-3), $1.70 and $0.80 for H1 and H2, respectively, and $3.36-$4.21 (P1-3). Based on our results, electronic surveys with 10, 20, 30, or 42 questions would be estimated to be most cost (and time) efficient if more than 101.6-225.9 (128.2-391.7), 139.8-229.2 (93.8-193.6), 165.8-230.6 (68.7-115.7), or 188.2-231.5 (44.4-72.7) participants were required, respectively., Conclusions: The study efficiency depended on the technical modalities of the survey methods and engagement of the participants. Depending on our study design, our results suggest that in similar projects that will certainly have more than two to three hundred required participants, the most efficient way of conducting a questionnaire-based survey is likely via the Internet with a digital questionnaire, specifically via a centralized e-mail.
- Published
- 2014
- Full Text
- View/download PDF
249. The boundary-spanning mechanisms of Nobel Prize winning papers
- Author
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Chaomei Chen and Yakub Sebastian
- Subjects
FOS: Computer and information sciences ,Computer and Information Sciences ,Cell Physiology ,Entropy ,Autophagic Cell Death ,Science ,Boundary spanning ,Space (commercial competition) ,Bibliometrics ,Research and Analysis Methods ,Betweenness centrality ,Citation analysis ,Medicine and Health Sciences ,Centrality ,Digital Libraries (cs.DL) ,Sociology ,Multidisciplinary ,Cell Death ,Physics ,Publications ,Biology and Life Sciences ,Computer Science - Digital Libraries ,Cell Biology ,Research Assessment ,Nobel Prize ,Databases as Topic ,Cell Processes ,Citation Analysis ,Physical Sciences ,Thermodynamics ,Medicine ,Bibliographies as Topic ,Mathematical economics ,Network Analysis ,Research Article - Abstract
The breakthrough potentials of research papers can be explained by their boundary-spanning qualities. Here, for the first time, we apply the structural variation analysis (SVA) model and its affiliated metrics to investigate the extent to which such qualities characterize a group of Nobel Prize winning papers. We find that these papers share remarkable boundary-spanning traits, marked by exceptional abilities to connect disparate and topically-diverse clusters of research papers. Further, their publications exert structural variations on the scale that significantly alters the betweenness centrality distributions of existing intellectual space. Overall, SVA not only provides a set of leading indicators for describing future Nobel Prize winning papers, but also broadens our understanding of the similar prize-winning properties that may have been overlooked among other regular publications., 27 pages, 8 figures, 9 tables. Submitted to Frontiers in Research Metrics and Analytics
- Published
- 2021
250. A comprehensive examination of the lysine acetylation targets in paper mulberry based on proteomics analyses
- Author
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Ping Li, Chao Chen, and Yibo Dong
- Subjects
Proteomics ,Chloroplasts ,Lysine ,Amino Acid Motifs ,Enzyme Metabolism ,Plant Science ,Biochemistry ,Serine ,Tandem Mass Spectrometry ,Nanotechnology ,Threonine ,Post-Translational Modification ,Amino Acids ,Photosynthesis ,Enzyme Chemistry ,Chromatography, High Pressure Liquid ,Protein Metabolism ,Multidisciplinary ,Chemistry ,Organic Compounds ,Plant Biochemistry ,Chemical Reactions ,Acetylation ,Physical Sciences ,Amino Acid Analysis ,Medicine ,Basic Amino Acids ,Cellular Structures and Organelles ,Cellular Types ,Research Article ,Plant Cell Biology ,Science ,Protein domain ,Research and Analysis Methods ,Protein Domains ,Plant Cells ,HSP70 Heat-Shock Proteins ,Secondary metabolism ,Molecular Biology Techniques ,Molecular Biology ,Histidine ,Phenylalanine Ammonia-Lyase ,Molecular Biology Assays and Analysis Techniques ,Organic Chemistry ,Chemical Compounds ,Biology and Life Sciences ,Proteins ,Cell Biology ,Gene Ontology ,Metabolism ,Enzymology ,Morus - Abstract
Rocky desertification is a bottleneck that reduces ecological and environmental security in karst areas. Paper mulberry, a unique deciduous tree, shows good performance in rocky desertification areas. Its resistance mechanisms are therefore of high interest. In this study, a lysine acetylation proteomics analysis of paper mulberry seedling leaves was conducted in combination with the purification of acetylated protein by high-precision nano LC-MS/MS. We identified a total of 7130 acetylation sites in 3179 proteins. Analysis of the modified sites showed a predominance of nine motifs. Six positively charged residues: lysine (K), arginine (R), and histidine (H), serine (S), threonine (T), and tyrosine (Y) occurred most frequently at the +1 position, phenylalanine (F) was both detected both upstream and downstream of the acetylated lysines; and the sequence logos showed a strong preference for lysine and arginine around acetylated lysines. Functional annotation revealed that the identified enzymes were mainly involved in translation, transcription, ribosomal structure and biological processes, showing that lysine acetylation can regulate various aspects of primary carbon and nitrogen metabolism and secondary metabolism. Acetylated proteins were enriched in the chloroplast, cytoplasm, and nucleus, and many stress response-related proteins were also discovered to be acetylated, including PAL, HSP70, and ERF. HSP70, an important protein involved in plant abiotic and disease stress responses, was identified in paper mulberry, although it is rarely found in woody plants. This may be further examined in research in other plants and could explain the good adaptation of paper mulberry to the karst environment. However, these hypotheses require further verification. Our data can provide a new starting point for the further analysis of the acetylation function in paper mulberry and other plants.
- Published
- 2021
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