1. Assessing Environmental Quality in a Historically Polluted Fjord: A Comparison of Benthic Foraminiferal eDNA and Morphospecies Approaches.
- Author
-
O'Brien, Phoebe, Barrenechea Angeles, Inés, Cermakova, Kristina, Pawlowski, Jan, Alve, Elisabeth, Nordberg, Kjell, and Polovodova Asteman, Irina
- Subjects
OXYGEN in water ,POLLUTANTS ,OCEAN bottom ,SILLS (Geology) ,PAPER industry - Abstract
This study is the first assessment of a fjord Ecological Quality Status (EcoQS) by comparing both the traditional morphology‐based and emerging metabarcoding techniques in benthic foraminifera. For this, we focus on historically polluted Idefjord on the Swedish Norwegian border, which has experienced high effluent load from pulp and paper mill for almost a century. Based on our results, the morphological data was more sensitive to "naturally stressed" conditions, like course sediments and cascading water inflows at fjord sills. Generally, both data sets report congruous responses in the EcoQS and benthic foraminiferal assemblages to environmental stress factors, showing highest diversity at the coastal reference station and the outer fjord, with a diversity decline in proximity of industrial facilities and at the most oxygen depleted sites in the inner fjord. Genetic methods tend to overestimate EcoQS at highly anoxic sites probably due to a presence of dormant propagules or extraorganismal DNA, emphasizing a need for cross‐correlation with morphological methods to validate EcoQS assessment in such conditions. Plain Language Summary: The Ecosystem Quality Status (EcoQS) of fjords can be difficult to assess because of natural variation caused by for example, complex sea floor topography and bottom water oxygen depletion. Fjords have often restricted water exchange, resulting in stagnant bottom waters and pollutant accumulation in basin sediment caused by proximity to industrial facilities. Benthic foraminifera (shell‐bearing protists) can be used to provide information about the health of such ecosystems. Environmental DNA (eDNA) extracted from sediment samples can also be used to identify the foraminifera species present and calculate biological indices. Yet, it is still unclear how well the eDNA technique performs in fjord EcoQS assessment and how it compares to the traditional morphology‐based approach. In Idefjord (Sweden‐Norway), historic dumping of waste from the pulp and paper industry, has led to a build‐up of organic matter, chemical pollutants in the sediment and widespread oxygen depletion. Based on our study, the fjord EcoQS determined by both approaches was fairly similar, showing highest diversity at the coastal reference station and the outer fjord, with a decline in diversity in proximity to industrial facilities and in the inner fjord. The genetic method, however, tended to over‐estimate the EcoQS at the anoxic stations, likely due to left‐over eDNA from transport or resting stages. Key Points: Natural and anthropogenic variability for example, low oxygen, organic matter and pollutant accumulation, deteriorate Ecological Quality StatusMorphology‐based and molecular assessment methods show congruent responses of benthic foraminifera to environmental stressGenetic methods can overestimate Ecological Quality Status in anoxic sites due to dormant propagules or transported DNA presence [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF