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In wildlife populations, parasites often go unnoticed, as infected animals appear asymptomatic. However, these infections can subtly alter behaviour. Field evidence of how these subclinical infections induce changes in movement behaviour is scarce in free-ranging animals, yet it may be crucial for zoonotic disease surveillance. We used an ultra-high-resolution tracking system (ATLAS) to monitor the movements of 60 free-ranging swallows every 8 seconds across four breeding seasons, resulting in over 1 million localizations. About 40% of these swallows were naturally infected with haemosporidian parasites. Here, we show that infected individuals had reduced foraging ranges, foraged in lower quality habitats, and faced a lowered survival probability, with an average reduction of 7.4%, albeit with some variation between species and years. This study highlights the impact of subclinical infections on movement behaviour and survival, emphasizing the importance of considering infection status in movement ecology. Our findings provide insights into individual variations in behaviour and previously unobservable local parasite transmission dynamics. Subclinical infections in wild swallows reduce foraging ranges, alter habitat use, and decrease survival rates. A study using ultra-high-resolution tracking reveals overlooked impacts of infection on movement behaviour and links them to demography. [ABSTRACT FROM AUTHOR]

Background: The use of mobile applications helps improving self-management in adolescents with asthma. However, no evidence is available for children with preschool wheezing. In addition, we have no data on the reliability of medical history collected at visits. The first aim was to assess the feasibility of a smartphone app in the management of preschool wheezing; secondly we aimed to evaluate the reliability of anamnestic data collected during face-to-face medical interviews. Methods: Children with recurrent wheezing, age between 25 and 72 months, were randomly assigned to the intervention group, provided with a smartphone app for symptoms monitoring and asthma attack treatment, or to the control group, with a written action plan. At follow-up medical history was collected and the asthma control test and a clinical questionnaire were completed. App acceptability was also explored. Respiratory symptoms, medication and utilization of healthcare resources were collected. Plus, medical information obtained from the paper questionnaires was compared with data daily recorded by the app. Results: We enrolled 85 preschool children with recurrent wheezing: 43 assigned to the intervention and 42 to the control group. The average (SD) adherence to e-Diary compilation was 60 (15)%. The acceptance and usability of the intervention was favorable as 70% and 93% of participants in the intervention arm described the app as ''simple and intuitive" at Visit1 (after 3 months from enrollement) and Visit2 (3 months later than Visit1), respectively and 95% and 98% found it useful in symptoms management. There were no significant differences between the two groups in clinical outcomes. At Visit1, the cACT median score (IQR) was 23,5 (21–25) for the control group (42 patients) and 23 (21–24) for the intervention group (43 patients). At Visit2 (41 controls and 42 in the intervention group) it was 25 (24–25) and 24 (24–25), respectively. Secondary analysis of data from the intervention group showed higher incidence of daily symptoms recorded by the app in comparison with the paper questionnaire, suggesting that collection of retrospective medical history may not be completely reliable. Conclusions: The smartphone app is usable and acceptable by families of preschool wheezers. Future controlled trial are needed to prove an impact on clinical outcomes or its efficacy in a telemedicine program. Finally a daily questionnaire could provide physicians with a more reliable clinical picture as reflected better daily asthma symptoms than the written retrospective questionnaire filled at clinical visit. [ABSTRACT FROM AUTHOR]

The twin-roll casting (TRC) of light metal alloys, in particular aluminium and magnesium alloys, represents a promising technology for the production of lightweight components thanks to its short process chain and promising combinations of properties. In the production of strip products, TRC is susceptible to a number of defects due to the coupled process steps of casting and forming, which prevent its use for more complex alloy combinations in the field. In this review, the defects in TRC of light metal alloys will be summarized and discussed. In addition to a basic classification of the defect types and definition of these, the formation mechanisms and avoidance strategies will be discussed. Special focus is placed on centreline segregation defects and surface bleeds, which occur in a large number of investigations in the literature. Effective avoidance strategies are defect-specific, but are mostly due to the combination of the plant design of the TRC process, the TRC parameters or the use of alloying elements to influence the solidification process. [ABSTRACT FROM AUTHOR]

The soil freeze-thaw (FT) state plays a significant role in cold ecosystems by influencing hydrology, geomorphology, ecology, thermodynamics, and soil chemistry. As climate change alters the frequency and timing of FT events, regions, such as the Tibetan Plateau and other subarctic permafrost zones, face significant environmental shifts, including land subsidence, altered hydrological processes, and carbon balance disturbances. This study aimed to detect frozen, thawed, and transition periods, with a particular emphasis on the identification of critical transition periods. A new approach called Percentile-based Freeze-Thaw Identification (PFTI) was applied to identify the three FT periodsusing C-band Synthetic Aperture Radar (SAR) data, specifically using Sentinel-1 VV and VH polarizations in both ascending and descending orbits. The PFTI approach is based on the Seasonal Threshold Approach (STA) with some modifications. We assessed the performance of PFTI against STA and validated it using the in-situ soil FT index. PFTI slightly improved the STA by 4% to 6% in detecting FT cycles over the Nagqu area of the Tibetan Plateau and Stordalen Mire in northern Sweden from 2017 to 2022. Moreover, PFTI demonstrated an accuracy of 94% without and 70% with transition periods in the Stordalen Mire, and 77% without and 50% with transition periods in the Nagqu area, as validated by in situ measurements. This study demonstrates the potential of PFTI on a monthly scale for detecting frozen, thawed, and transition periods on a regional scale to better monitor shifts due to the impacts of climate change in the most vulnerable regions. [ABSTRACT FROM AUTHOR]

Researchers often perform data-driven variable selection when modeling the associations between an outcome and multiple independent variables in regression analysis. Variable selection may improve the interpretability, parsimony and/or predictive accuracy of a model. Yet variable selection can also have negative consequences, such as false exclusion of important variables or inclusion of noise variables, biased estimation of regression coefficients, underestimated standard errors and invalid confidence intervals, as well as model instability. While the potential advantages and disadvantages of variable selection have been discussed in the literature for decades, few large-scale simulation studies have neutrally compared data-driven variable selection methods with respect to their consequences for the resulting models. We present the protocol for a simulation study that will evaluate different variable selection methods: forward selection, stepwise forward selection, backward elimination, augmented backward elimination, univariable selection, univariable selection followed by backward elimination, and penalized likelihood approaches (Lasso, relaxed Lasso, adaptive Lasso). These methods will be compared with respect to false inclusion and/or exclusion of variables, consequences on bias and variance of the estimated regression coefficients, the validity of the confidence intervals for the coefficients, the accuracy of the estimated variable importance ranking, and the predictive performance of the selected models. We consider both linear and logistic regression in a low-dimensional setting (20 independent variables with 10 true predictors and 10 noise variables). The simulation will be based on real-world data from the National Health and Nutrition Examination Survey (NHANES). Publishing this study protocol ahead of performing the simulation increases transparency and allows integrating the perspective of other experts into the study design. [ABSTRACT FROM AUTHOR]

The peak prevalence of many brain tumors is in elderly patients. These patients are often treated with platelet inhibitors (PIs) or anticoagulants (ACs), creating a challenge for neurosurgeons concerning the perioperative management. The aim of this study is to analyze the effect of PI/AC treatment on the postoperative bleeding rates in patients undergoing craniotomy due to a brain tumor. Retrospective analysis of 415 consecutive patients undergoing craniotomy/craniectomy due to a brain tumor. Ninety-nine patients with PI/AC treatment (PI/AC group consisting of 64 PI, 29 AC, and six multiple) and 316 patients without PI/AC (control group) were primarily compared for hemorrhage rate. Secondary outcome measures were clinical outcome and mortality. The association between short preoperative discontinuation (≤5 days), early postoperative resumption time (≤5 days), as well as short total discontinuation time (≤5 days) of PI/AC and postoperative bleeding rates was analyzed. Postoperative bleeding rates were comparable between the groups (12.2% and 13.5% in the PI/AC and control group, respectively; p=.74). The majority of bleeds were asymptomatic (85.2%). No significant difference in the postoperative mortality rate was observed (1.0% and 1.6% in the PI/AC and the control group, respectively; p=.67). Shorter discontinuation time of PI/AC was not significantly associated with higher postoperative bleeding rates (preoperative: 12.1% vs. 12.3%; p=.94, postoperative: 11.1% vs. 12.5%, respectively; p=.87, total: 16.7% vs. 12%, respectively; p=.73). Patients treated with PI/AC undergoing craniotomy for the resection of brain tumor do not seem to have increased rates of postoperative bleeding or mortality. We did not find a significant correlation between short discontinuation time of PI/AC in the perioperative period and postoperative bleeding. [ABSTRACT FROM AUTHOR]

The abundance of shark and actinopterygian fossils in the Cretaceous and Paleogene strata of the Atlantic Coastal Plain is well documented; but much remains unknown about the survivorship patterns of these major components of shallow marine faunas in the western Atlantic through the K/Pg mass extinction. To shed light on this subject, we describe an assemblage of new actinopterygian, chondrichthyan, and reptilian microfossils recently recovered from the Maastrichtian Navesink and Maastrichtian-Danian Hornerstown formations at the Jean and Ric Edelman Fossil Park at Rowan University in Mantua Township, New Jersey. The new microfossils clarify extinction patterns across the K/Pg, create temporal and geographic range extensions for several taxa, and expand the known fauna of this regionally-rare and important K/Pg-boundary locality. We report 11 new additions to the vertebrate fauna of Edelman Fossil Park, the first Paleocene record of Saurocephalus lanciformis, the first Cretaceous records of Paralbula marylandica and Palaeogaleus vincenti, and the first recovery of gar and dercetid fish remains from the Paleocene in New Jersey (the last indicating that these fish survived the K/Pg extinction in the western Atlantic). Geographic range extensions include: Notidanodon brotzeni into the Western Hemisphere, Saurocephalus into northeastern North America and Phyllodus paulkatoi to the eastern coast of North America. A dentary of a juvenile alligatorid, Bottosaurus harlani, indicate that the mandible exhibited isometric growth through ontogeny. Our findings generally agree with other studies that these groups were significantly impacted by the extinction event, that extinctions were selective, and recovery was slow. This wealth of novel insights garnered from microfossils in this study highlights their critical importance for elaborating past faunas and illuminating the character of ancient ecosystems. We therefore recommend microsieving as a fruitful method for future faunal studies of shallow-marine strata and predict that such efforts will frequently yield similar important insights. [ABSTRACT FROM AUTHOR]

This essay argues that the textual differences between the quarto and folio versions of William Shakespeare's 2 Henry VI evince the three-way ideological contestation between the aristocracy, the middling sort, and the lower classes in early modern England. Perhaps the most famous scenes from the play, those depicting Jack Cade's rebellion, exist in both versions, but the portrayal of the uprising is very different between the two texts. The 1594 quarto gives us a vicious Cade intent on destroying businesses, raping women, and spurning well-meaning nobles; the 1623 folio version, by contrast, gives us an eloquent if imperfect Cade whose grievances are justified, reasoned, and well articulated. Political and economic power was steadily shifting during this period from the aristocracy to the middling sort, and, although the differences in Cade's rebellion from the quarto to the folio might seem to indicate a revision in favor of the rebels, what the changes represent is the beginning of the transfer of ideological power from the aristocracy to upper-class commoners. To the nobility, the rebels are rioters, intent on causing chaos. For the middling sort, it was more advantageous to label them justified protesters, as the rebellion might remove the middling sort's direct competition—the aristocracy. Thus, the two authoritative texts of Shakespeare's 2 Henry VI can help us understand changing perceptions of popular riot and protest in the period and their connection to dominant and emerging class ideologies. [ABSTRACT FROM AUTHOR]

The abundance of shark and actinopterygian fossils in the Cretaceous and Paleogene strata of the Atlantic Coastal Plain is well documented; but much remains unknown about the survivorship patterns of these major components of shallow marine faunas in the western Atlantic through the K/Pg mass extinction. To shed light on this subject, we describe an assemblage of new actinopterygian, chondrichthyan, and reptilian microfossils recently recovered from the Maastrichtian Navesink and Maastrichtian-Danian Hornerstown formations at the Jean and Ric Edelman Fossil Park at Rowan University in Mantua Township, New Jersey. The new microfossils clarify extinction patterns across the K/Pg, create temporal and geographic range extensions for several taxa, and expand the known fauna of this regionally-rare and important K/Pg-boundary locality. We report 11 new additions to the vertebrate fauna of Edelman Fossil Park, the first Paleocene record of Saurocephalus lanciformis, the first Cretaceous records ofParalbula marylandica and Palaeogaleus vincenti, and the first recovery of gar and dercetid fish remains from the Paleocene in New Jersey (the last indicating that these fish survived the K/Pg extinction in the western Atlantic). Geographic range extensions include: Notidanodon brotzeni into the Western Hemisphere, Saurocephalus into northeastern North America and Phyllodus paulkatoi to the eastern coast of North America. A dentary of a juvenile alligatorid, Bottosaurus harlani, indicate that the mandible exhibited isometric growth through ontogeny. Our findings generally agree with other studies that these groups were significantly impacted by the extinction event, that extinctions were selective, and recovery was slow. This wealth of novel insights garnered from microfossils in this study highlights their critical importance for elaborating past faunas and illuminating the character of ancient ecosystems. We therefore recommend microsieving as a fruitful method for future faunal studies of shallow-marine strata and predict that such efforts will frequently yield similar important insights. [ABSTRACT FROM AUTHOR]

Background: Human pluripotent stem cells (hPSCs) have an enormous therapeutic potential, but large quantities of cells will need to be supplied by reliable, economically viable production processes. The suspension culture (three-dimensional; 3D) of hPSCs in stirred tank bioreactors (STBRs) has enormous potential for fuelling these cell demands. In this study, the efficient long-term matrix-free suspension culture of hPSC aggregates is shown. Methods and results: STBR-controlled, chemical aggregate dissociation and optimized passage duration of 3 or 4 days promotes exponential hPSC proliferation, process efficiency and upscaling by a seed train approach. Intermediate high-density cryopreservation of suspension-derived hPSCs followed by direct STBR inoculation enabled complete omission of matrix-dependent 2D (two-dimensional) culture. Optimized 3D cultivation over 8 passages (32 days) cumulatively yielded ≈4.7 × 1015 cells, while maintaining hPSCs' pluripotency, differentiation potential and karyotype stability. Gene expression profiling reveals novel insights into the adaption of hPSCs to continuous 3D culture compared to conventional 2D controls. Conclusions: Together, an entirely matrix-free, highly efficient, flexible and automation-friendly hPSC expansion strategy is demonstrated, facilitating the development of good manufacturing practice-compliant closed-system manufacturing in large scale. [ABSTRACT FROM AUTHOR]

Indirect evaporative cooling is a technology that can be used sustainably to replace traditional cooling systems using thermodynamic compression cycles, especially in tropical countries like Brazil, which have many regions with hot climates and low relative humidity. These meteorological aspects favor the simultaneous transfer of heat and mass, allowing the thermal cooling effect characteristic of evaporative cooling processes. Thus, this paper investigates the performance of a sustainable air cooling system by combining the psychrometric effects of warm, dry air with the flow features inside a cyclone covered by a layer of a fabric moistened with water. Fluid dynamic simulations previously indicated temperature decreases of up to 12.2 K between the feed and overflow streams of the cyclone. In addition, temperature contours showed that the fluid dynamics of the cyclone provide instantaneous thermal exchange between the walls and the internal fluid. These results directed the study to execute an experimental design using the response surface methodology to evaluate the influence of some variables in the process. The decrease in air stream temperature ranged from 3.9 to 13.1 K, with relative humidity and ambient temperature being the most significant variables. The results also indicated that water consumption to maintain the fabric wet is relatively low since 16·10-3 kg of liquid is required to cool 1 m³ of air flowing through the cyclone. [Display omitted] • High inlet temperature and low relative humidity provided maximum thermal gradients. • Within 0.75 s, in average, the system provided a thermal reduction of up to 13 K. • The thermal efficiency of the wet-bulb for the new system varied from 54.8 to 67.8 %. • Dimensionless numbers for psychrometric cooling system showed a linear behavior. [ABSTRACT FROM AUTHOR]

The study "The Church Registers and National Socialist 'Genealogy' in the Diocese of Hildesheim" by Maik Schmerbauch examines the role of church registers in the context of National Socialist "genealogy" research. The author analyzes the church register archive in the Diocese of Hildesheim and demonstrates the complicity and competition among various actors, including the Reich Genealogical Office, political communities, and National Socialist associations. The establishment of the church register archive was a clever move by Bishop Joseph Godehard Machens to maintain control over the church registers and protect them from National Socialist ideology. The study provides insights into the work of church register archive director Ferdinand Keseling and other protagonists. [Extracted from the article]

Background: The coronavirus 2019 (COVID-19) related containment measures led to the disruption of all virus distribution. Bronchiolitis-related hospitalizations shrank during 2020–2021, rebounding to pre-pandemic numbers the following year. This study aims to describe the trend in bronchiolitis-related hospitalization this year, focusing on severity and viral epidemiology. Methods: We conducted a retrospective investigation collecting clinical records data from all infants hospitalized for bronchiolitis during winter (1st September-31th March) from September 2018 to March 2023 in six Italian hospitals. No trial registration was necessary according to authorization no.9/2014 of the Italian law. Results: Nine hundred fifty-three infants were hospitalized for bronchiolitis this last winter, 563 in 2021–2022, 34 in 2020–2021, 395 in 2019–2020 and 483 in 2018–2019. The mean length of stay was significantly longer this year compared to all previous years (mean 7.2 ± 6 days in 2022–2023), compared to 5.7 ± 4 in 2021–2022, 5.3 ± 4 in 2020–2021, 6.4 ± 5 in 2019–2020 and 5.5 ± 4 in 2018–2019 (p < 0.001), respectively. More patients required mechanical ventilation this winter 38 (4%), compared to 6 (1%) in 2021–2022, 0 in 2020–2021, 11 (2%) in 2019–2020 and 6 (1%) in 2018–2019 (p < 0.05), respectively. High-flow nasal cannula and non-invasive respiratory supports were statistically more common last winter (p = 0.001 or less). RSV prevalence and distribution did not differ this winter, but coinfections were more prevalent 307 (42%), 138 (31%) in 2021–2022, 1 (33%) in 2020–2021, 68 (23%) in 2019–2020, 61 (28%) in 2018–2019 (p = 0.001). Conclusions: This study shows a growth of nearly 70% in hospitalisations for bronchiolitis, and an increase in invasive respiratory support and coinfections, suggesting a more severe disease course this winter compared to the last five years. [ABSTRACT FROM AUTHOR]

Topologically interlocked structures (TIS) are structural assemblies that achieve stability and carrying capacity through the geometric arrangement of interlocking blocks, relying solely on contact and friction forces for load transfer. Unlike beam-like TIS, whose deflection never exceeds the height of the blocks, the deflection of slab-like TIS often does. Yet, the upper limit of deflection of slab-like TIS, a key parameter defining their loading energy capacity, remains unexplored. Here, we establish a theoretical upper bound for the deflection capacity of slab-like TIS and outline a systematic design strategy to approach this upper bound. This strategy is based on engineering the contact interfaces such that the non-central blocks are more engaged in the structural response, leading to a more global and holistic deformation mode with higher deflections. We demonstrate the application of this strategy in a numerical case study on a typical slab-like TIS and show that it leads to an increase in deflection by a factor of 3.5, yielding a value closer to the upper bound than previously reported in the literature. We find that the resulting deflection mode engages all the blocks equally, avoids localized sliding modes, and resembles that of monolithic equivalents. Lastly, we show that the strategy not only maximizes TIS' deflection capacity but also their loading energy capacity. [ABSTRACT FROM AUTHOR]

Quantitative research into the effectiveness of the UN human rights treaty bodies (UNTBs) in eliciting remedial responses from states is impeded by a lack of usable data on how states respond to their decisions. The new Treaty Body Views Dataset (TBVD) aims to fill this gap. It comprises details on all published decisions in individual complaints cases issued by the UNTBs between 1979 and 2019 and matches these with information on their state of compliance. The TBVD can be used for research on the activities of the treaty bodies, the nature of the decisions themselves, or state behavior following a decision. An empirical application illustrates how the TBVD can advance knowledge about the factors that correlate with compliance with adverse UNTB decisions. Results show that the likelihood of implementation hinges critically on decision-level characteristics, and reveal differences and similarities between compliance with UNTB decisions and regional human rights court judgments. [ABSTRACT FROM AUTHOR]

In classical radar imaging, such as in Earth remote sensing, electromagnetic waves are usually assumed to propagate in free space. However, in numerous applications, such as ground penetrating radar or non-destructive testing, this assumption no longer holds. When there is a multi-material background, the subsurface image reconstruction becomes considerably more complex. Imaging can be performed in the spatial domain or, equivalently, in the wavenumber domain (k-space). In subsurface imaging, to date, objects with a non-planar surface are commonly reconstructed in the spatial domain, by the Backprojection algorithm combined with ray tracing, which is computationally demanding. On the other hand, objects with a planar surface can be reconstructed more efficiently in k-space. However, many non-planar surfaces are partly planar. Therefore, in this paper, a novel concept is introduced that makes use of the efficient k-space-based reconstruction algorithms for partly planar scenarios, too. The proposed algorithm forms an image from superposing sub-images where as many image parts as possible are reconstructed in the wavenumber domain, and only as many as necessary are reconstructed in the spatial domain. For this, a segmentation scheme is developed to determine which parts of the image volume can be reconstructed in the wavenumber domain. The novel concept is verified by measurements, both from monostatic synthetic aperture radar data and multiple-input–multiple-output radar data. It is shown that the computational efficiency for imaging irregularly shaped geometries can be significantly augmented when applying the proposed concept. [ABSTRACT FROM AUTHOR]

Abstract In recent years, several European reception countries have made rapid labor-market integration a key part of refugee policy. Little is known about how such services work, how involved actors address their clients, and what effects this entails. This article examines labor-market integration projects targeting refugee women in post-2015 Germany. Comparing six projects of various organizational backgrounds, I identify two contradictory approaches: a femonationalist logic that addresses refugee women as barely employable caring mothers and spouses; and an intersectional feminist logic that perceives them as equally economically-active subjects. I argue that organizational rationales contribute to the limitations of gender-specific reception politics. [ABSTRACT FROM AUTHOR]

As the population worldwide is aging, the need for surgery in elderly patients with neurotrauma is increasing. The aim of this study was to compare the outcome of elderly patients undergoing surgery for neurotrauma with younger patients and to identify the risk factors for mortality. We retrospectively analyzed consecutive patients undergoing craniotomy or craniectomy for neurotrauma at our institution from 2012 to 2019. Patients were divided into two groups (≥70 years or <70 years) and compared. The primary outcome was the 30-day mortality rate. Potential risk factors for 30-day mortality were assessed in a uni- and multivariate regression model for both age groups, forming the basis of a 30-day mortality prediction score. We included 163 consecutive patients (average age 57.98 ± 19.87 years); 54 patients were ≥70 years. Patients ≥70 years showed a significantly better median preoperative Glasgow Coma Scale (GCS) score compared with young patients (P < 0.001), and fewer pupil asymmetry (P = 0.001), despite having a higher Marshall score (P = 0.07) at admission. Multivariate regression analysis identified low pre- and postoperative GCS scores and the lack of prompt postoperative prophylactic low-molecular-weight heparin treatment as risk factors for 30-day mortality. Our score showed moderate accuracy in predicting 30-day mortality with an area under the curve of 0.76. Elderly patients after neurotrauma present with a better GCS at admission despite having more severe radiographic injuries. Mortality and favorable outcome rates are comparable between the age groups. [ABSTRACT FROM AUTHOR]

The article deals with the territorial fragmentation and diverse power structures in the Holy Roman Empire, which influenced Jewish life. It shows how the religious boundary crossing of baptism and intra-family conflicts affected Jewish life. The authors emphasize the importance of territorial fragmentation and the mixed-confessional structure for Jewish life in the Holy Roman Empire. Two essays are presented that deal with the handling of different religious groups with divergent calendar systems and Jewish foundation activities. The use of relational databases for analyzing Jewish networks in the 17th and 18th centuries is also described. [Extracted from the article]

An important challenge relating to clinical diagnostics of the foodborne pathogen Shiga toxin-producing E. coli (STEC), is that PCR-detection of the shiga-toxin gene (stx) in DNA from stool samples can be accompanied by a failure to identify an STEC isolate in pure culture on agar. In this study, we have explored the use of MinION long-read sequencing of DNA from bacterial culture swipes to detect the presence of STEC, and bioinformatic tools to characterize the STEC virulence factors. The online workflow "What's in my pot" (WIMP) in the Epi2me cloud service, rapidly identified STEC also when it was present in culture swipes together with multiple other E. coli serovars, given sufficient abundance. These preliminary results provide useful information about the sensitivity of the method, which has potential to be used in clinical diagnostic of STEC, particularly in cases where a pure culture of the STEC isolate is not obtained due to the 'STEC lost Shiga toxin' phenomenon. [ABSTRACT FROM AUTHOR]

Recent experiments have heightened our understanding of reactions which can stabilize biomolecules during early diagenesis, yet little remains known about how groundwater chemistry can aid or hinder molecular preservation within a bone through geologic time. To elucidate this issue, we conducted actualistic experiments of bone decay employing varied fluid compositions to simulate a suite of groundwaters. Modern domestic chicken (Gallus gallus) femora were placed in a matrix of compositionally- and texturally-mature, fluvially-deposited sand. To simulate groundwater flow, deionized water or solutions enriched in calcium carbonate, phosphate, or iron were percolated through separate trials for a period of 90 days. After completion of the experiment, degradation of the bones was examined via histologic thin sectioning and two immunoassays against collagen I, the primary bone structural protein: immunofluorescence and enzyme-linked immunosorbent assay. Collagen loss was found to be greatest in the iron trial and least in the calcium carbonate trial, the latter of which experienced partial permineralization with calcite over the course of the experiment. Specifically, the iron trial was found to retain only ~35 ng of collagen I per 100 ng of protein extract, whereas the calcium carbonate trial retained ~90 ng of collagen I. Further, in the iron and calcium carbonate trials, cementation of sediment onto bone surfaces preferentially occurred over more porous regions of the epiphyses, perhaps stimulated by greater release of decay compounds from these regions of the bones. Of the two trials exhibiting intermediate results, the phosphate trial induced slightly greater decay of collagen than the deionized water control, which retained ~60 ng and ~80 ng of collagen I per 100 ng of protein extract, respectively. These results demonstrate that highly acidic conditions during early diagenesis can overwhelm any preservative effects of free radical-mediated stabilization reactions, whereas early-diagenetic permineralization can drastically slow biomolecular decay (ostensibly by hampering microbial access to the interior of a bone), thereby increasing the likelihood of a bone to retain biomolecules and/or their decay products through protracted diagenesis. Future variations of this actualistic experiment employing varied durations, solute concentrations, bacterial communities, pH values, and/or host sediments could provide further important insights into the ways in which early-diagenetic environments control the initial decay of biomolecules within bone and other tissues. [ABSTRACT FROM AUTHOR]

Time series (TS) and multiple time series (MTS) predictions have historically paved the way for distinct families of deep learning models. The temporal dimension, distinguished by its evolutionary sequential aspect, is usually modeled by decomposition into the trio of "trend, seasonality, noise", by attempts to copy the functioning of human synapses, and more recently, by transformer models with self-attention on the temporal dimension. These models may find applications in finance and e-commerce, where any increase in performance of less than 1 % has large monetary repercussions, they also have potential applications in natural language processing (NLP), medicine, and physics. To the best of our knowledge, the information bottleneck (IB) framework has not received significant attention in the context of TS or MTS analyses. One can demonstrate that a compression of the temporal dimension is key in the context of MTS. We propose a new approach with partial convolution, where a time sequence is encoded into a two-dimensional representation resembling images. Accordingly, we use the recent advances made in image extension to predict an unseen part of an image from a given one. We show that our model compares well with traditional TS models, has information–theoretical foundations, and can be easily extended to more dimensions than only time and space. An evaluation of our multiple time series–information bottleneck (MTS-IB) model proves its efficiency in electricity production, road traffic, and astronomical data representing solar activity, as recorded by NASA's interface region imaging spectrograph (IRIS) satellite. [ABSTRACT FROM AUTHOR]

Purpose: Disparities in the diagnosis and treatment of patients with differentiated thyroid cancer (DTC) have been described. This review includes the most recent literature on existing diagnostic and treatment disparities in the United States and proposes practical clinical and policy ideas for improving the gap in the treatment of DTC. Methodology: We performed a comprehensive literature review to include key articles related to DTC and disparities of treatment, diagnosis, and outcomes for disadvantaged patient populations. Results: Vulnerable patient populations with DTC have been extensively studied, and the literature shows that clear disparities of diagnosis and treatment exist. Socioeconomically disadvantaged patients, uninsured, rural, elderly, and patients belonging to minoritized racial and ethnic groups are more likely to present with advanced disease at presentation. These same vulnerable patient populations are less likely to have access to high-volume surgeons, less likely to be treated according to guidelines, and receive less aggressive treatment (such as radioactive iodine) compared with white patients. Further, these patients experience financial toxicity more so than their counterparts. Conclusions: Disparities of care exist for certain vulnerable patient populations with DTC. Approaches to rectify these should be multipronged and involve improving access to high-volume specialists with ongoing use of telehealth consults, language concordant care, an emphasis on guideline-directed therapies, ensuring continuity of care and long-term follow-up with better community partnerships, engage diverse patients in national guideline-writing committees of prominent societies and reducing the financial burden of cancer treatments at the state and national policy level. [ABSTRACT FROM AUTHOR]

Cytokeratin 13 (CK13) is a type I acidic low molecular weight cytokeratin, which is mainly expressed in urothelium and in the squamous epithelium of various sites of origin. Loss of CK13 has been implicated in the development and progression of squamous epithelial neoplasms. To comprehensively determine CK13 expression in normal and neoplastic tissues, a tissue microarray containing 10,439 samples from 131 different tumor types and subtypes as well as 608 samples of 76 different normal tissue types was analyzed by immunohistochemistry. CK13 immunostaining was detectable in 42 (32.1%) of the 131 tumor categories including 24 (18.3%) tumor types with at least one strongly positive case. The highest rate of positive staining was found in various urothelial neoplasms (52.1–92.3%) including Brenner tumor of the ovary (86.8%) and in squamous cell carcinomas from various sites of origin (39.1–77.6%), Warthin tumors of parotid glands (66.7%), adenosquamous carcinomas of the cervix (33.3%), thymomas (16.0%), and endometroid carcinomas of the ovary (15.3%). Twenty other epithelial or germ cell neoplasms showed – a usually weak – CK13 positivity in less than 15% of the cases. In bladder cancer, reduced CK13 expression was linked to high grade and advanced stage (p < 0.0001 each). In squamous cell carcinoma of the cervix, reduced CK13 immunostaining was related to high grade (p = 0.0295) and shortened recurrence‐free (p = 0.0094) and overall survival (p = 0.0274). In a combined analysis of 1,151 squamous cell carcinomas from 11 different sites of origin, reduced CK13 staining was linked to high grade (p = 0.0050). Our data provide a comprehensive overview on CK13 expression in normal and neoplastic human tissues. CK13 expression predominates in urothelial neoplasms and in squamous cell carcinomas of different organs, and a loss of CK13 expression is associated with aggressive disease in these tumors. [ABSTRACT FROM AUTHOR]

In recent years, unsupervised analysis of microbiome data, such as microbial network analysis and clustering, has increased in popularity. Many new statistical and computational methods have been proposed for these tasks. This multiplicity of analysis strategies poses a challenge for researchers, who are often unsure which method(s) to use and might be tempted to try different methods on their dataset to look for the "best" ones. However, if only the best results are selectively reported, this may cause over-optimism: the "best" method is overly fitted to the specific dataset, and the results might be non-replicable on validation data. Such effects will ultimately hinder research progress. Yet so far, these topics have been given little attention in the context of unsupervised microbiome analysis. In our illustrative study, we aim to quantify over-optimism effects in this context. We model the approach of a hypothetical microbiome researcher who undertakes four unsupervised research tasks: clustering of bacterial genera, hub detection in microbial networks, differential microbial network analysis, and clustering of samples. While these tasks are unsupervised, the researcher might still have certain expectations as to what constitutes interesting results. We translate these expectations into concrete evaluation criteria that the hypothetical researcher might want to optimize. We then randomly split an exemplary dataset from the American Gut Project into discovery and validation sets multiple times. For each research task, multiple method combinations (e.g., methods for data normalization, network generation, and/or clustering) are tried on the discovery data, and the combination that yields the best result according to the evaluation criterion is chosen. While the hypothetical researcher might only report this result, we also apply the "best" method combination to the validation dataset. The results are then compared between discovery and validation data. In all four research tasks, there are notable over-optimism effects; the results on the validation data set are worse compared to the discovery data, averaged over multiple random splits into discovery/validation data. Our study thus highlights the importance of validation and replication in microbiome analysis to obtain reliable results and demonstrates that the issue of over-optimism goes beyond the context of statistical testing and fishing for significance. Author summary: Microbiome research focuses on communities of microbes, for example, those living in the human gut. To identify the structure of such communities, constructing microbial networks that represent associations between different microbes has become popular. The microbial associations are often further analyzed by applying cluster algorithms, i.e., researchers try to find groups (clusters) of microbes that are strongly associated with each other. Likewise, researchers are also interested in finding clusters of samples that are similar in bacterial compositions, often referred to as enterotypes. To produce broader and more reliable insights, networks and clustering results that have been constructed based on one specific dataset should generalize to other datasets as well. However, this may be compromised by the large number of statistical methods available for network learning and clustering. Due to uncertainty about which method to use, researchers might try multiple approaches on their dataset and pick the method which yields the "best" result (e.g., the network that has the highest number of strongly connected microbes). When many such methods are tried, the "best" method may be overly fitted to the specific dataset at hand, and the result may not generalize to new data. Our study demonstrates such over-optimism effects and gives recommendations for detecting and/or avoiding over-optimistic bias. We aim to generate greater awareness around this issue and to increase reliability of future microbiome studies. [ABSTRACT FROM AUTHOR]

In recent years, it was shown that itaconic acid can be produced from glucose with Ustilago strains at up to maximum theoretical yield. The use of acetate and formate as co-feedstocks can boost the efficiency of itaconate production with Ustilaginaceae wild-type strains by reducing the glucose amount and thus the agricultural land required for the biotechnological production of this chemical. Metabolically engineered strains (U. cynodontis Δfuz7 Δcyp3 ↑Pria1 and U. cynodontis Δfuz7 Δcyp3 PetefmttA ↑Pria1) were applied in itaconate production, obtaining a titer of 56.1 g L−1 and a yield of 0.55 gitaconate per gsubstrate. Both improved titer and yield (increase of 5.2 g L−1 and 0.04 gitaconate per gsubstrate, respectively) were achieved when using sodium formate as an auxiliary substrate. By applying the design-of-experiments (DoE) methodology, cultivation parameters (glucose, sodium formate and ammonium chloride concentrations) were optimized, resulting in two empirical models predicting itaconate titer and yield for U. cynodontis Δfuz7 Δcyp3 PetefmttA ↑Pria1. Thereby, an almost doubled itaconate titer of 138 g L−1 was obtained and a yield of 0.62 gitaconate per gsubstrate was reached during confirmation experiments corresponding to 86% of the theoretical maximum. In order to close the carbon cycle by production of the co-feed via a "power-to-X" route, the biphasic Ru-catalysed hydrogenation of CO2 to formate could be integrated into the bioprocess directly using the obtained aqueous solution of formates as co-feedstock without any purification steps, demonstrating the (bio)compatibility of the two processes. [ABSTRACT FROM AUTHOR]

The existing models for the service life design of concrete structures exposed to chloride lack the possibilities to consider the effect of accelerated aging due to load-induced microcracks, since the respective formation of the cracks (widths, length, shape) cannot be summarised in generally valid factors. Thus we propose an approach related to the level of the applied load and not to the properties of appearing cracks to consider this effect. We therefore designed a set-up to determine the impact of external loading on the non-steady-state chloride migration coefficient D nssm of various concrete and mortar mixes. We were able to point out a correlation between the applied load level and increasing D nssm -values and a influence of the aggregate size on the intensity of this effect. A final comparative study directly quantifies the impact of load-related increasing migration coefficients on the service life of concrete and mortar components. • External load effects the chloride migration resistance of concrete and mortar in dependency on the size of the aggregates. • The developed test set-up enables a precise adjustment of certain load and stress levels on classic RCM-specimens. • By making a sample calculation, the impact of external load was directly referred to a a loss in service life. [ABSTRACT FROM AUTHOR]

The formability of magnesium alloys can be significantly improved by Ca as an alloying addition. Compared to conventional alloy sheets such as AZ31, texture modification can be found in rolled Mg-Ca sheets, which reveal a randomized orientation distribution. The hot deformation behavior of a twin-roll cast and homogenized Mg-2Zn-1Al-0.3Ca (ZAX210) alloy was characterized during hot compression at a temperature of 350 °C and strain rates of 0.1 s−1 and 10 s−1. Electron backscatter diffraction (EBSD) analysis was performed in order to describe the microstructural and texture evolution. The ZAX210 alloy exhibits a pronounced dynamic recrystallization (DRX) behavior during compression at high strain rates, while at lower strain rates DRX hardly occurred. This effect can be attributed to different DRX mechanisms that take place as a function of strain rate. At low strain rates, DRX occurred locally at the grain boundaries of the original microstructure, forming a so-called necklace structure. Increasing strain rate results in an increased fraction of recrystallized grains from 18% (0.1 s−1) to 39% (10 s−1). The microstructure revealed that twin boundaries act as nucleation sites for the DRX (TDRX). The recrystallized areas exhibit a weaker texture compared to the deformed microstructure. [ABSTRACT FROM AUTHOR]

The incidence of papillary thyroid cancer (PTC) in the United States has tripled in the past 30 y. Polybrominated diphenyl ethers (PBDEs) are flame retardants that were ubiquitously used over that time period, and exposure to PBDEs has been associated with PTC prevalence. They are potential carcinogens via their induction of reactive oxygen species (ROS) formation and resultant deoxyribonucleic acid (DNA) damage. We sought to determine the effects of PBDE and tris(2-chloroethyl) phosphate (TCEP), another flame retardant implicated in PTC incidence, on thyrocytes in vitro and measure PBDE levels in human thyroid tissue to determine their carcinogenic potential. Nthy-Ori, an immortalized benign human thyroid follicular cell line was used as a model of normal human thyroid. MTT assays were used to measure cell viability after exposure to PBDEs and TCEP. ROS levels and double-stranded and single-stranded DNA breaks were measured to determine genotoxicity. DNA damage response protein levels were measured with immunoblotting. Exposure to 20μM PBDE or TCEP for 48 h had minimal effects on thyrocyte viability. There was no significant increase in intracellular ROS up to 6 h following PBDE or TCEP exposure in thyrocytes; however, cells exposed to PBDE 47 showed evidence of DNA single-stranded and double-stranded breaks. There was a dose-dependent increase in γH2AX levels following exposure to PBDEs 47 and 209 in Nthy-Ori cells but not with TCEP treatment. PBDE 47 and 209 demonstrated genotoxicity but not cytotoxicity in follicular thyrocytes in vitro. Therefore, PBDE 47 and 209 may be carcinogenic in human thyroid cells. [ABSTRACT FROM AUTHOR]

A common explanation for state acceptance of the optional individual communications procedures (ICPs) of UN human rights treaties involves costly signalling theory. Commitment to ICPs is said to enable states to signal sincere commitment more credibly. Such signalling, however, is not particularly costly and ultimately a reasonable motive for only a small number of states. For most states that accept ICPs, signalling bears no obvious instrumental value; for many, the global ICPs also overlap with existing and institutionally stronger human rights monitoring mechanisms at the regional level. This begs the question: Why do states seek such overlap and redundancy? Acknowledging the role of preferences for effective human rights protection, we suggest an additional reputational motive that foregrounds the value of consistency in commitments and related reputations. Employing survival analysis and data for six ICPs, we show that ICP acceptance is particularly driven by states that are also subject to institutionally stronger regional human rights courts. Given the marginal benefits in rights protection through adding overlap, we argue that the effects of consistent commitment on the perception of a state's character provide a persuasive supplementary explanation. [ABSTRACT FROM AUTHOR]

New neutron transmission data at resonance energies using a 197 Au sample were measured using an early version of the Device for Indirect Capture Experiments on Radionuclides (DICER), which is under development at the Los Alamos Neutron Science Center (LANSCE). These data were combined with previous neutron transmission and capture data in a simultaneous R-matrix analysis to extract improved neutron resonance parameters for this nuclide. As a result, total radiation widths, Γ γ , were obtained for 33 J = 1 and 44 J = 2 197 Au+n resonances. Γ γ distributions for these two spins states were compared to distributions calculated according to the nuclear statistical model using published nuclear level density (NLD) and photon strength functions (PSF) measured using the Oslo technique. The calculated distributions were found to be narrower and the average values for the two spins states closer together than the data. The calculation can be brought into agreement with the data by substantial modifications to the spin distribution in 198 Au as a function of excitation energy. As far as we know, the spin distribution currently is otherwise poorly constrained. The modified spin distribution changes the shapes of the NLD and PSF extracted using the Oslo technique and so could have broad implications. [ABSTRACT FROM AUTHOR]

Magnesium sheet metal alloys offer a deformation asymmetry, which is strongly related to grain size and texture. In order to predict deformation behavior as well as to provide methods to eliminate anisotropy and yield asymmetry, a lot of effort is invested in studying the tension–compression asymmetry of magnesium alloys. However, only a few studies deal with the characterization of the yield asymmetry of magnesium wrought alloys, especially Ca-containing alloys, related to temperature and strain. In this study, the orthotropic behavior of a twin-roll-cast, homogenized, rolled and finish-annealed Mg-2Zn-1Al-0.3Ca (ZAX210) magnesium alloy was investigated by tensile testing at room temperature, 150 °C and 250 °C. The r-values were determined and the Hill'48 yield criterion was used for the constitutive formulation of the plastic yielding and deformation. The yield loci calculated using Mises and Hill'48 as well as the determined r-values reveal an almost isotropic behavior of the ZAX210 alloy. The r-value increases with increasing logarithmic strain. At 0.16 logarithmic strain the r-values at room temperature vary between 1 (0°) and 1.5 (45° and 90°). At higher temperatures (250 °C), r-values close to 1 at all tested directions are attained. The enhanced yield asymmetry can be attributed to the weaker basal texture that arises during hot rolling and final annealing of the twin-roll-cast ZAX210 magnesium alloy. In comparison to AZ31, the ZAX210 alloy shows a yield behavior close to transversal isotropy. Finally, responsible mechanisms for this behavior are discussed. [ABSTRACT FROM AUTHOR]

In order to evaluate the influence of certain experimental or material-related conditions on results of the rapid chloride migration test (RCM test), statistical tests within and between samples are necessary. Thus, it needs to be clear which scatter a sample or a population of results is already subjected to without external influences due to the test method itself. So far, however, literature values for the appropriate statistical variable (coefficient of variation, CoV) explicitly valid for mortar or fine-grained concrete, e.g., for concrete repair, are missing. Therefore, we suggest a specific mortar CoV based on our own results of RCM tests performed on a cement-rich, sprayable mortar based on ordinary Portland cement. For the evaluation of external influences on a sample in comparison to a reference sample, we developed a significance criterion based on a statistical hypothesis test. The sensitivity and the reliability of this criterion is demonstrated on various results from RCM tests on mortar specimens, according to the test specifications and with deliberately chosen deviations from it. In addition, we point out the parameters included in the calculation of the rapid chloride migration coefficient that are the most sensitive to unintentional errors. [ABSTRACT FROM AUTHOR]

Simple Summary: Although many analytical techniques have shown that organic material can be preserved in fossils for millions of years, the geochemical factors that allow this preservation are not well understood. This is partly because paleomolecular studies often do not include geochemical analyses of the fossil or burial environment from which it came. We conducted in-depth geological, geochemical, and molecular analyses of a specimen of Dreadnoughtus schrani, an immense dinosaur from Argentina. We reviewed physical aspects of the sediments in which Dreadnoughtus was deposited, then characterize the following features: the structural integrity of the bone microstructure; the amount and type of external mineral that infiltrated the bone; the concentration of elements that are rare in the Earth's crust (REEs) throughout the bone; the preservation of soft-tissue structures (e.g., bone cells and blood vessels); the preservation of bone protein using antibodies that specifically recognize collagen I. Our data show that original bone microstructures and protein are preserved in Dreadnoughtus, and that after burial, the specimen was exposed to weakly-oxidizing conditions and groundwaters rich in "light" REEs but experienced little further chemical alteration after this early stage of fossilization. Our findings support the idea that fossils showing lower concentrations of REEs are well suited for molecular analyses. Evidence that organic material preserves in deep time (>1 Ma) has been reported using a wide variety of analytical techniques. However, the comprehensive geochemical data that could aid in building robust hypotheses for how soft-tissues persist over millions of years are lacking from most paleomolecular reports. Here, we analyze the molecular preservation and taphonomic history of the Dreadnougtus schrani holotype (MPM-PV 1156) at both macroscopic and microscopic levels. We review the stratigraphy, depositional setting, and physical taphonomy of the D. schrani skeletal assemblage, and extensively characterize the preservation and taphonomic history of the humerus at a micro-scale via: (1) histological analysis (structural integrity) and X-ray diffraction (exogenous mineral content); (2) laser ablation-inductively coupled plasma mass spectrometry (analyses of rare earth element content throughout cortex); (3) demineralization and optical microscopy (soft-tissue microstructures); (4) in situ and in-solution immunological assays (presence of endogenous protein). Our data show the D. schrani holotype preserves soft-tissue microstructures and remnants of endogenous bone protein. Further, it was exposed to LREE-enriched groundwaters and weakly-oxidizing conditions after burial, but experienced negligible further chemical alteration after early-diagenetic fossilization. These findings support previous hypotheses that fossils that display low trace element uptake are favorable targets for paleomolecular analyses. [ABSTRACT FROM AUTHOR]

Simple Summary: Reports of the recovery of proteins and other molecules from fossils have become so common over the last two decades that some paleontologists now focus almost entirely on studying how biologic molecules can persist in fossils. In this study, we explored the fossilization history of a specimen of the hadrosaurid dinosaur Brachylophosaurus which was previously shown to preserve original cells, tissues, and structural proteins. Trace element analyses of the tibia of this specimen revealed that after its bones were buried in a brackish estuarine channel, they fossilized under wet conditions which shifted in redox state multiple times. The successful recovery of proteins from this specimen, despite this complex history of chemical alterations, shows that the processes which bind and stabilize biologic molecules shortly after death provide them remarkable physical and chemical resiliency. By uniting our results with those of similar studies on other dinosaur fossils known to also preserve original proteins, we also conclude that exposure to oxidizing conditions in the initial ~48 h postmortem likely promotes molecular stabilization reactions, and the retention of early-diagenetic trace element signatures may be a useful proxy for molecular recovery potential. Recent recoveries of peptide sequences from two Cretaceous dinosaur bones require paleontologists to rethink traditional notions about how fossilization occurs. As part of this shifting paradigm, several research groups have recently begun attempting to characterize biomolecular decay and stabilization pathways in diverse paleoenvironmental and diagenetic settings. To advance these efforts, we assessed the taphonomic and geochemical history of Brachylophosaurus canadensis specimen MOR 2598, the left femur of which was previously found to retain endogenous cells, tissues, and structural proteins. Combined stratigraphic and trace element data show that after brief fluvial transport, this articulated hind limb was buried in a sandy, likely-brackish, estuarine channel. During early diagenesis, percolating groundwaters stagnated within the bones, forming reducing internal microenvironments. Recent exposure and weathering also caused the surficial leaching of trace elements from the specimen. Despite these shifting redox regimes, proteins within the bones were able to survive through diagenesis, attesting to their remarkable resiliency over geologic time. Synthesizing our findings with other recent studies reveals that oxidizing conditions in the initial ~48 h postmortem likely promote molecular stabilization reactions and that the retention of early-diagenetic trace element signatures may be a useful proxy for molecular recovery potential. [ABSTRACT FROM AUTHOR]

Vietnam's 3260 km coastline is densely populated, experiences rapid urban and economic growth, and faces at the same time a high risk of coastal hazards. Satellite archives provide a free and powerful opportunity for long-term area-wide monitoring of the coastal zone. This paper presents an automated analysis of coastline dynamics from 1986 to 2021 for Vietnam's entire coastal zone using the Landsat archive. The proposed method is implemented within the cloud-computing platform Google Earth Engine to only involve publicly and globally available datasets and tools. We generated annual coastline composites representing the mean-high water level and extracted sub-pixel coastlines. We further quantified coastline change rates along shore-perpendicular transects, revealing that half of Vietnam's coast did not experience significant change, while the remaining half is classified as erosional (27.7%) and accretional (27.1%). A hotspot analysis shows that coastal segments with the highest change rates are concentrated in the low-lying deltas of the Mekong River in the south and the Red River in the north. Hotspots with the highest accretion rates of up to +47 m/year are mainly associated with the construction of artificial coastlines, while hotspots with the highest erosion rates of −28 m/year may be related to natural sediment redistribution and human activity. [ABSTRACT FROM AUTHOR]

Ustilago maydis is an important plant pathogen that causes corn smut disease and serves as an effective biotechnological production host. The lack of a comprehensive metabolic overview hinders a full understanding of the organism's environmental adaptation and a full use of its metabolic potential. Here, we report the first genome-scale metabolic model (GSMM) of Ustilago maydis (iUma22) for the simulation of metabolic activities. iUma22 was reconstructed from sequencing and annotation using PathwayTools, and the biomass equation was derived from literature values and from the codon composition. The final model contains over 25% annotated genes (6909) in the sequenced genome. Substrate utilization was corrected by BIOLOG phenotype arrays, and exponential batch cultivations were used to test growth predictions. The growth data revealed a decrease in glucose uptake rate with rising glucose concentration. A pangenome of four different U. maydis strains highlighted missing metabolic pathways in iUma22. The new model allows for studies of metabolic adaptations to different environmental niches as well as for biotechnological applications. [ABSTRACT FROM AUTHOR]

Cluster analysis refers to a wide range of data analytic techniques for class discovery and is popular in many application fields. To assess the quality of a clustering result, different cluster validation procedures have been proposed in the literature. While there is extensive work on classical validation techniques, such as internal and external validation, less attention has been given to validating and replicating a clustering result using a validation dataset. Such a dataset may be part of the original dataset, which is separated before analysis begins, or it could be an independently collected dataset. We present a systematic, structured review of the existing literature about this topic. For this purpose, we outline a formal framework that covers most existing approaches for validating clustering results on validation data. In particular, we review classical validation techniques such as internal and external validation, stability analysis, and visual validation, and show how they can be interpreted in terms of our framework. We define and formalize different types of validation of clustering results on a validation dataset, and give examples of how clustering studies from the applied literature that used a validation dataset can be seen as instances of our framework. This article is categorized under:Technologies > Structure Discovery and ClusteringAlgorithmic Development > StatisticsTechnologies > Machine Learning [ABSTRACT FROM AUTHOR]

The family of Ustilaginaceae belongs to the order of Basidiomycetes. Despite their plant pathogenicity causing, e.g., corn smut disease, they are also known as natural producers of value-added chemicals such as extracellular glycolipids, organic acids, and polyols. Here, we present 17 high-quality draft genome sequences (N50 > 1 Mb) combining third-generation nanopore and second-generation Illumina sequencing. The data were analyzed with taxonomical genome-based bioinformatics methods such as Percentage of Conserved Proteins (POCP), Average Nucleotide Identity (ANI), and Average Amino Acid Identity (AAI) analyses indicating that a reclassification of the Ustilaginaceae family might be required. Further, conserved core genes were determined to calculate a phylogenomic core genome tree of the Ustilaginaceae that also supported the results of the other phylogenomic analysis. In addition, to genomic comparisons, secondary metabolite clusters (e.g., itaconic acid, mannosylerythritol lipids, and ustilagic acid) of biotechnological interest were analyzed, whereas the sheer number of clusters did not differ much between species. [ABSTRACT FROM AUTHOR]

Objective: The aim of the study was to find out whether it is possible to successfully convert a communication course for around 400 students to a blended-learning format (asynchronous theoretical course/synchronous digital practical course). The main focus thereby was on assessing subjective learning progress and the extent to which the importance of communication and doctor-patient communication can be conveyed online. The study is based on the results of an evaluation of the opinions of both the students and the lecturers that participated in the course. Methods: The students, who were in their fourth preclinical semester in 2020, were asked to fill in a self-assessment sheet at the beginning of the course, and following its completion. The feedback provided by the lecturers was also assessed. In order to compare the results and identify possible discrepancies, the corresponding self-assessment and evaluation results for the past 10 years (stemming from traditional classroom courses) were also taken into account. Results: Participants in the online courses reported distinct subjective learning progress, and greater progress than was reported for traditional courses in previous years. The suitability of the online format was viewed critically by both students and lecturers, while the course atmosphere was seen positively. The relevance of doctor-patient communication was assessed particularly highly in the online format. Conclusion: Based on the results of the evaluation, the experience gained from the blended-learning format will be included into future iterations of the communication course at Goethe University Frankfurt. The results have shown that doctor-patient communication can be learned well online. This format can therefore be recommended for new learning concepts in the future. [ABSTRACT FROM AUTHOR]

Since the beginning of the COVID-19 pandemic, SARS-CoV-2 has caused a global burden for health care systems due to high morbidity and mortality rates, leading to caseloads that episodically surpass hospital resources. Due to different disease manifestations, the triage of patients at high risk for a poor outcome continues to be a major challenge for clinicians. The AIFELL score was developed as a simple decision instrument for emergency rooms to distinguish COVID-19 patients in severe disease stages from less severe COVID-19 and non-COVID-19 cases. In the present study, we aimed to evaluate the AIFELL score as a prediction tool for clinical deterioration and disease severity in hospitalized COVID-19 patients. During the second wave of the COVID-19 pandemic in Switzerland, we analyzed consecutively hospitalized patients at the Triemli Hospital Zurich from the end of November 2020 until mid-February 2021. Statistical analyses were performed for group comparisons and to evaluate significance. AIFELL scores of patients developing severe COVID-19 stages IIb and III during hospitalization were significantly higher upon admission compared to those patients not surpassing stages I and IIa. Group comparisons indicated significantly different AIFELL scores between each stage. In conclusion, the AIFELL score at admission was useful to predict the disease severity and progression in hospitalized COVID-19 patients. [ABSTRACT FROM AUTHOR]

In lichen symbioses, fungal secondary metabolites provide UV protection on which lichen algae such as trebouxiophycean green algae—the most prominent group of photobionts in lichen symbioses—sensitively depend. These metabolites differ in their UV absorbance capability and solvability, and thus vary in their propensity of being leached from the lichen body in humid and warm environments, with still unknown implications for the global distribution of lichens. In this study covering more than 10,000 lichenised fungal species, we show that the occurrence of fungal‐derived metabolites in combination with their UV absorbance capability and their probability of being leached in warm and humid environments are important eco‐evolutionary drivers of global lichen distribution. Fungal‐derived UV protection seems to represent an indirect environmental adaptation in which the lichen fungus invests to protect the trebouxiophycean photobiont from high UV radiation in warm and humid climates and, by doing this, secures its carbon source. [ABSTRACT FROM AUTHOR]

Objective: To verify the attitudes and practices of dietary management for cow's milk allergy by caregivers according to the stages of behavior change. Methods: Observational, cross-sectional study involving 30 caregivers of children with cow's milk allergy who were followed up in a specialized outpatient clinic, from July 2018 to May 2019. Data collection included a structured questionnaire about sociodemographic aspects, social classification and an adapted algorithm to classify the stages of behavior change based on a trans-theoretical model. Results: Most caregivers (26/30) were females aged 20 to 48 years and belonging to social classes C, D and E. Regarding the stages of behavior change for the dietary management of cow's milk allergy according to the model, 80% of the participants (24/30) were in the action stage, while 20% (6/30) were in the maintenance stage. Conclusions: The attitudes and practices of caregivers for the dietary management of cow's milk allergy are influenced by feelings and emotions that can interfere with communication and the understanding of dietary guidelines; however, these caregivers are in different stages of action and maintenance to change behavior that correspond to their attitudes and practices. [ABSTRACT FROM AUTHOR]

The pick-up velocity is a threshold velocity that is considered when designing hydraulic or pneumatic conveying systems. Defining the conveyed particles as 'settling' or 'non-settling' affects the calculation method of the pressure drop over a hydraulic conveying system. Rheometers are commonly used to measure the dynamic viscosity of liquids and suspensions. In this work, a unique method of using a rheometer is presented. The method enables simple measurement of the pick-up velocity by increasing the rotational speed of the rheometer. In addition, characterizing the particles as non-settling is achieved by decreasing the rotational speed. The results of this work correlate well with previously published results, confirming that these two parameters can be found by conducting very simple and quick measurements. [Display omitted] • The pick-up velocity in liquids can be measured by a specific operation of a rheometer. • The pick-up velocities agree well with previously developed model. • By a specific operation of a rheometer, non-settling particles in liquids can be identified. • The non-settling systems agree well with previous findings. [ABSTRACT FROM AUTHOR]

A 72‐year‐old female patient used the oral phosphate binder lanthanum carbonate for 6 years, before discontinuing it after receiving a pancreas and kidney transplant. Now, 7 years after discontinuation, the patient developed bilious emesis. An upper gastrointestinal endoscopy showed an unspecific gastritis. Biopsies showed subepithelial crystalline deposits consistent with gastric lanthanosis. [ABSTRACT FROM AUTHOR]

The number of patients treated with platelet inhibitors (PI) and/or anticoagulants (AC) in neurosurgery is increasing. The aim of this study was to analyse the effect of PI/AC discontinuation time on hemorrhagic events after craniotomy for neurovascular pathologies. The 30-day postoperative bleeding rates were retrospectively compared between short (≤5 days) and long (>5 days) discontinuation time of PI/AC before and after surgery. Kaplan-Meier survival analysis comparing time to postoperative bleeding and the effect of PI/AC discontinuation time on bleeding rates were analysed. Potential risk factors for postoperative bleeding were further analysed in uni- and multivariate analysis. Out of 215 consecutive patients undergoing craniotomy for neurovascular lesions between January 2009 and April 2019, 23.3% were treated with PI/AC. Of these 36% (n = 18) and 20.8% (n = 10) were included in the short pre- and postoperative discontinuation group, respectively. Bleeding rates were comparable between the pre- and postoperative short and long discontinuation groups (preoperative 11.1% vs 10%, p =.659; postoperative 0% vs 13.2%, p =.566). In-hospital mortality rates and time to bleed of the groups were comparable as well. Similarly, the rate for thromboembolic events was not significantly affected by the pre- or postoperative discontinuation time of PI/AC. After multivariate analysis preoperative bleeding of the lesion was significantly associated with postoperative bleeding. Patients with short discontinuation time of PI/AC treatment undergoing craniotomy for the treatment of neurovascular lesions do not appear to have increased rates of postoperative bleeding. [ABSTRACT FROM AUTHOR]

The macrocyclic calix[4]arene ligand H2L comprises two non‐fluorescent 2,6‐bis‐(iminomethyl)phenolate chromophores, which show a chelation‐enhanced fluorescence enhancement upon Zn2+ ion complexation. Macrocyclic [ZnL] complexes aggregate in the absence of external coligands via intermolecular Zn−N bonds to give dimeric [ZnL]2 structures comprising two five‐coordinated Zn2+ ions. The absorption and emission wavelengths are bathochromically shifted upon going from the liquid (λmax,abs (CH2Cl2)=404 nm, λmax,em (CH2Cl2)=484 nm) to the solid state (λmax,abs=424 nm (4 wt%, BaSO4 pellet), λmax,em=524 nm (neat solid)). Insights into the electronic nature of the UV‐vis transitions were obtained with time‐dependent density functional theory (TD‐DFT) calculations for a truncated model complex. [ABSTRACT FROM AUTHOR]

The diabetic foot ulcer (DFU) is a major disabling complication of diabetes mellitus. Growing evidence suggests that topical erythropoietin (EPO) can promote wound healing. The aim of this study is to clinically assess the efficacy of a proprietary topical EPO-containing hydrogel for treating DFUs. We conducted a randomized, controlled trial in 20 patients with DFUs. After a 14-day screening period, the DFUs of 20 eligible participants who fulfilled the inclusion criteria were randomly assigned (1:1) to either a 12-week of daily treatment with topical EPO and standard-of-care (SOC) or SOC treatment alone. The DFUs were assessed weekly until week 12. The primary outcome was 75% ulcer closure or higher. After 12 weeks of treatment, 75% ulcer closure was achieved in 6 of the 10 patients whose DFUs were treated with topical EPO and in one of the 8 patients whose DFUs were treated with SOC alone. The mean area of the DFUs that were treated with topical EPO and SOC was significantly smaller than those treated with SOC alone (1.2 ± 1.4 cm2 vs. 4.2 ± 3.4 cm2; p = 0.023). Re-epithelialization was faster in the topically EPO-treated DFUs than in the SOC-treated DFUs. There were no treatment-related adverse events. We conclude that topical EPO is a promising treatment for promoting the healing of DFUs. Clinical Trial Registration number: NCT02361931. [ABSTRACT FROM AUTHOR]

Polymer solution dynamics may be inferred from light scattering spectra of dissolved optical probe particles. We compare a variety of probes in solutions of several polymers. In the ‘‘overlapping’’ concentration/molecular weight regime, the Stokes–Einstein equation fails by up to a factor of 2, while the probe diffusion coefficient D follows a scaling law D/D0=exp(-aMγcνRδ) (c, M, and R are the polymer concentration, molecular weight, and the probe radius, respectively). Experimentally, γ=0.8±0.1, ν=0.6–1.0, and δ=-0.1 to 0, contrary to the theoretical predictions γ=0 and δ=1. With very high molecular-weight polymers, we observe a further ‘‘entangled’’ regime, characterized by huge (104) failures of the Stokes–Einstein equation and the appearance of ‘‘fast’’ modes in the scattering spectrum. [ABSTRACT FROM AUTHOR]