221 results on '"Silva del Rio, N."'
Search Results
2. Effect of a dairy farmworker stewardship training program on antimicrobial drug usage in dairy cows
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Portillo-Gonzalez, R., Garzon, A., Pereira, R.V.V., Silva-del-Rio, N., Karle, B.M., and Habing, G.G.
- Published
- 2024
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3. Effect of probiotics on performance and health of dairy calves: protocol for a systematic review and meta-analysis
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Lopes, R. B., Fausak, E. D., Winder, C. B., Canozzi, M. E. A., and Silva-del-Rio, N.
- Published
- 2020
4. Implications of supplementing mid-lactation multiparous Holstein cows fed high by-product low-forage diets with rumen-protected methionine and lysine in a commercial dairy
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Abreu, M.B., Valldecabres, A., Marcondes, M.I., Correa, A.F., Lobos, N.E., Peterson, C.B., Atwell, D., and Silva-del-Rio, N.
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- 2023
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5. Characterization of controlled trials on probiotic supplementation to dairy calves: A scoping review
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Branco-Lopes, R., Bernal-Córdoba, C., Valldecabres, A., Winder, C., Canozzi, M.E., and Silva-del-Río, N.
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- 2023
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6. Relative availability of five inorganic magnesium sources in non-pregnant non-lactating Holstein cows.
- Author
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Silva-Del-Rio N, Solórzano LC, Lago A, Lobo RR, Goff JP, Weiss WP, and Tempelman RJ
- Abstract
Inorganic sources of Mg are commonly used in dairy cow diets, but their availability varies significantly. This study assessed the relative availability of 4 commonly used inorganic Mg sources and a novel alkalinizing proprietary mineral blend [PMB; Multesium (GLC Minerals, LLC, Green Bay, WI, USA)]. The study was a duplicated 6 × 6 Latin square, with 12 nonlactating, non-pregnant Holstein dairy cows assigned to a square based on BW and parity. Cows were fed 90% of their voluntary DMI (diet contained 0.21% Mg). Each experimental period lasted 7 d. On d 2 of each period, urinary catheters were fitted. Total urine collection started on d 3 for 48 h with samples collected and measured every 12 h. On d 4, 30 g of Mg were administered as boluses with gelatin capsules: negative control (one empty capsule), magnesium oxide (MgO), magnesium sulfate (MgSO
4 ), calcium magnesium hydroxide [CaMg(OH)4 ], calcium magnesium carbonate [CaMg(CO3 )2 ], and PMB [a blend of Ca and Mg sources that includes CaMg(CO3 )2 , CaMg(OH)4 , and MgO]. Blood samples were collected at 0, 1, 2, 3, 12, and 24 h after treatment administration on d 4 of each treatment period. Urine and blood samples were analyzed for Mg and Ca concentration. Statistical analyses were conducted with PROC GLIMMIX including treatment, time, period, square, treatment × time, treatment × period, and time × period as fixed effects, and cow nested within square as a random effect in the model. Urinary Mg excretion for 4 of the Mg sources studied [PMB, MgO, CaMg(OH)4 , and MgSO4 ] increased significantly, representing an increase of at least 40.8% relative to control. The supplementation of CaMg(CO3 )2 did not significantly increase relative to control. There were no significant changes in blood Mg concentration with treatment; but, a significant treatment × time effect was observed. Calcium-rich sources [PMB, CaMg(OH)4 , CaMg(CO3 )2 ] had lower blood Mg concentrations at 12 or 24 h after treatment than control and CaMg(CO3 )2 . Based on urinary Mg excretion 24 h after treatment, 4 of the Mg sources evaluated (including PMB) showed a similar availability, however, the availability of the commercial CaMg(CO3 )2 source included in our study was similar to the negative control (no-supplemented cows)., (© 2024, The Authors. Published by Elsevier Inc. on behalf of the American Dairy Science Association®. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).)- Published
- 2024
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- View/download PDF
7. WGS of intrauterine E. coli from cows with early postpartum uterine infection reveals a non-uterine specific genotype and virulence factors.
- Author
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Garzon A, Basbas C, Schlesener C, Silva-Del-Rio N, Karle BM, Lima FS, Weimer BC, and Pereira RV
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- Cattle, Animals, Female, Cross-Sectional Studies, Whole Genome Sequencing, Uterine Diseases microbiology, Uterine Diseases veterinary, Uterine Diseases genetics, Genome, Bacterial, Uterus microbiology, Anti-Bacterial Agents pharmacology, Genome-Wide Association Study, Drug Resistance, Bacterial genetics, Virulence Factors genetics, Escherichia coli Infections veterinary, Escherichia coli Infections microbiology, Escherichia coli genetics, Escherichia coli pathogenicity, Escherichia coli isolation & purification, Escherichia coli classification, Genotype, Cattle Diseases microbiology, Postpartum Period
- Abstract
Escherichia coli has been attributed to playing a major role in a cascade of events that affect the prevalence and severity of uterine disease in cattle. The objectives of this project were to (i) define the association between the prevalence of specific antimicrobial resistance and virulence factor genes in E. coli with the clinical status related to uterine infection, (ii) identify the genetic relationship between E. coli isolates from cows with diarrhea, with mastitis, and with and without metritis, and (iii) determine the association between the phenotypic and genotypic antimicrobial resistance identified on the E. coli isolated from postpartum cattle. Bacterial isolates ( n = 148) were obtained from a larger cross-sectional study. Cows were categorized into one of three clinical groups before enrollment: metritis, cows with purulent discharge, and control cows. For genomic comparison, public genomes ( n = 130) from cows with diarrhea, mastitis, and metritis were included in a genome-wide association study, to evaluate differences between the drug classes or the virulence factor category among clinical groups. A distinct E. coli genotype associated with metritis could not be identified. Instead, a high genetic diversity among the isolates from uterine sources was present. A virulence factor previously associated with metritis ( fim H) using PCR was not associated with metritis. There was moderate accuracy for whole-genome sequencing to predict phenotypic resistance, which varied depending on the antimicrobial tested. Findings from this study contradict the traditional pathotype classification and the unique intrauterine E. coli genotype associated with metritis in dairy cows.IMPORTANCEMetritis is a common infectious disease in dairy cattle and the second most common reason for treating a cow with antimicrobials. The pathophysiology of the disease is complex and is not completely understood. Specific endometrial pathogenic Escherichia coli have been reported to be adapted to the endometrium and sometimes lead to uterine disease. Unfortunately, the specific genomic details of the endometrial-adapted isolates have not been investigated using enough genomes to represent the genomic diversity of this organism to identify specific virulence genes that are consistently associated with disease development and severity. Results from this study provide key microbial ecological advances by elucidating and challenging accepted concepts for the role of Intrauterine E. coli in metritis in dairy cattle, especially contradicting the existence of a unique intrauterine E. coli genotype associated with metritis in dairy cows, which was not found in our study., Competing Interests: The authors declare no conflict of interest.
- Published
- 2024
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8. Development and implementation of an onfarm animal health and diagnostic educational training program for farm workers in antimicrobial stewardship in adult dairy cattle
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Garzon, A., primary, Portillo, R., additional, Habing, G., additional, Silva-del-Rio, N., additional, Karle, B. M., additional, and Pereira, R., additional
- Published
- 2023
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9. Evaluation of antimicrobial resistance and risk factors for recovery of intrauterine Escherichia coli from cows with metritis on California commercial dairy farms
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Basbas, C., primary, Garzon, A., additional, Silva-del-Rio, N., additional, Byrne, B. A., additional, Karle, B. M., additional, Aly, S. S., additional, Williams, D. R., additional, and Pereira, R., additional
- Published
- 2023
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10. Quantification of antimicrobial usage on dairy farms before, during and after the implementation of farmworker stewardship training
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Portillo-Gonzalez, R., primary, Garzon-Audor, A., additional, Pereira, R. V. V., additional, Silva-del-Rio, N., additional, Karle, B. M., additional, and Habing, G. G., additional
- Published
- 2023
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11. Defining clinical diagnosis and treatment of puerperal metritis in dairy cows: A Scoping Review
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Garzon, A., primary, Habing, G., additional, Lima, F., additional, Silva-del-Rio, N., additional, Samah, F., additional, and Pereira, R., additional
- Published
- 2023
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12. Total mixed ration recipe preparation and feeding times for high-milk-yield cows on California dairies
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Trillo, Y., Lago, A., and Silva-del-Río, N.
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- 2017
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13. Colostrum immunoglobulin G concentration of multiparous Jersey cows at first and second milking is associated with parity, colostrum yield, and time of first milking, and can be estimated with Brix refractometry
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Silva-del-Río, N., Rolle, D., García-Muñoz, A., Rodríguez-Jiménez, S., Valldecabres, A., Lago, A., and Pandey, P.
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- 2017
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14. Antimicrobial resistance of Escherichia coli from dairy farms participating in an antimicrobial stewardship educational program for farm employees.
- Author
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Garzon A, Portillo R, Habing G, Silva-Del-Rio N, Karle BM, and Pereira RV
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- Humans, Adult, Female, Animals, Cattle, Farms, Escherichia coli, Drug Resistance, Bacterial, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Antimicrobial Stewardship
- Abstract
Antimicrobial use in food-producing animals is under increasing scrutiny due to the potential effect on the selection of antimicrobial-resistant bacteria that may be transmitted to humans by direct contact, with the food chain, or the environment. Novel data monitoring commensal Escherichia coli from dairy farms is essential for understanding antimicrobial resistance (AMR) patterns and their association with herd health management practices. The objectives of this study were to: (1) compare the prevalence of antimicrobial resistance in the E. coli isolates from the hospital, fresh, and mid-lactation pens from 18 conventional dairy farms participating in an educational training program in antimicrobial stewardship practices in California and Ohio, and (2) to characterize the prevalence of antimicrobial resistance of commensal E. coli isolated from pooled fecal pat samples before and 3 mo after participating in the educational training program. Pooled fecal pat samples were collected from the hospital pen, the fresh pen (1 to 5 DIM), and the mid-lactation pens (90 to 150 DIM) on conventional dairies in CA (n = 9) and OH (n = 9). Fecal samples were collected as part of a larger study using a quasi-experimental design that assigned farms to the training intervention group (TG; 6 per state) or the control group (CG; 3 per state). For the TG, farm worker(s) identified as having the task of diagnosis and treatment of adult cows on the farm participated in a training program on antimicrobial stewardship practices. Pooled fecal samples (n = 7) were collected at enrollment and 3 mo after completing the intervention on each of the participating farms (n = 18), followed by culture for E. coli isolation and antimicrobial sensitivity testing using the broth microdilution methodology. Logistic regression models were used to evaluate the association between E. coli antimicrobial resistance patterns with the training intervention and farm-level factors. No effect was observed in the prevalence of resistant isolates between the control and intervention farms after the training was delivered. Isolates from the hospital pens were 2.48 (95% CI: 1.06-6.22, P = 0.03) and 5.61 (95% CI: 1.94-16.91, P < 0.001) times, more likely to be resistant to streptomycin and chloramphenicol, respectively, than isolates from the mid-lactation pens. Our findings indicate there was a higher prevalence of AMR in E. coli associated with the hospital pen within the farm, while the training program for 3 mo did not affect the prevalence of AMR in E. coli on the farms participating in the program. Further research efforts should be conducted to identify factors driving AMR at the pen level, as well as approaches that could be used to reduce the risk of disseminating AMR from sick pens to animals being housed and to other pens on the farm., (The Authors. Published by Elsevier Inc. and Fass Inc. on behalf of the American Dairy Science Association®. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).)
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- 2024
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15. Fresh-cow handling practices and methods for identification of health disorders on 45 dairy farms in California
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Espadamala, A., Pallarés, P., Lago, A., and Silva-del-Río, N.
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- 2016
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16. Effects of subcutaneous calcium administration at calving on mineral status, health, and production of Holstein cows
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Amanlou, H., Akbari, A.P., Farsuni, N.E., and Silva-del-Río, N.
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- 2016
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17. Deviation from the formulated target weight of ingredients loaded into high milk yield cow recipes on California dairies
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Trillo, Y., Lago, A., and Silva-del-Río, N.
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- 2016
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18. Evaluation of two methodologies for lameness detection in dairy cows based on postural and gait abnormalities observed during milking and while restrained at headlock stanchions
- Author
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García-Muñoz, A., Vidal, G., Singh, N., and Silva-del-Río, N.
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- 2016
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19. A survey of silage management practices on California dairies
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Heguy, J.M., Meyer, D., and Silva-del-Río, N.
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- 2016
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20. Blood calcium dynamics after prophylactic treatment of subclinical hypocalcemia with oral or intravenous calcium
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Blanc, C.D., Van der List, M., Aly, S.S., Rossow, H.A., and Silva-del-Río, N.
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- 2014
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21. Unveiling the microbiome during post-partum uterine infection: a deep shotgun sequencing approach to characterize the dairy cow uterine microbiome.
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Basbas C, Garzon A, Schlesener C, van Heule M, Profeta R, Weimer BC, Silva-Del-Rio N, Byrne BA, Karle B, Aly SS, Lima FS, and Pereira RV
- Abstract
Background: The goal of this study was to assess the microbial ecology and diversity present in the uterus of post-partum dairy cows with and without metritis from 24 commercial California dairy farms using shotgun metagenomics. A set subset of 95 intrauterine swab samples, taken from a larger selection of 307 individual cow samples previously collected, were examined for α and β diversity and differential abundance associated with metritis. Cows within 21 days post-partum were categorized into one of three clinical groups during sample collection: control (CT, n = 32), defined as cows with either no vaginal discharge or a clear, non-purulent mucus vaginal discharge; metritis (MET, n = 33), defined as a cow with watery, red or brown colored, and fetid vaginal discharge; and purulent discharge cows (PUS, n = 31), defined as a non-fetid purulent or mucopurulent vaginal discharge., Results: All three clinical groups (CT, MET, and PUS) were highly diverse, with the top 12 most abundant genera accounting for 10.3%, 8.8%, and 10.1% of mean relative abundance, respectively. The α diversity indices revealed a lower diversity from samples collected from MET and PUS when compared to CT cows. PERMANOVA statistical testing revealed a significant difference (P adjusted < 0.01) in the diversity of genera between CT and MET samples (R2 = 0.112, P = 0.003) and a non-significant difference between MET and PUS samples (R2 = 0.036, P = 0.046). ANCOM-BC analysis revealed that from the top 12 most abundant genera, seven genera were increased in the natural log fold change (LFC) of abundance in MET when compared to CT samples: Bacteroides, Clostridium, Fusobacterium, Phocaeicola, Porphyromonas, Prevotella, and Streptococcus. Two genera, Dietzia and Microbacterium, were decreased in natural LFC of abundance when comparing MET (regardless of treatment) and CT, while no changes in natural LFC of abundance were observed for Escherichia, Histophilus, and Trueperella., Conclusions: The results presented here, are the current deepest shotgun metagenomic analyses conducted on the bovine uterine microbiome to date (mean of 256,425 genus-level reads per sample). Our findings support that uterine samples from cows without metritis (CT) had increased α-diversity but decreased β-diversity when compared to metritis or PUS cows, characteristic of dysbiosis. In summary, our findings highlight that MET cows have an increased abundance of Bacteroides, Porphyromonas, and Fusobacterium when compared to CT and PUS, and support the need for further studies to better understand their potential causal role in metritis pathogenesis., (© 2023. The Author(s).)
- Published
- 2023
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22. Changes in Uterine Metabolome Associated with Metritis Development and Cure in Lactating Holstein Cows.
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de Oliveira EB, Monteiro HF, Pereira JMV, Williams DR, Pereira RV, Silva Del Rio N, Menta PR, Machado VS, and Lima FS
- Abstract
The objective of this study was to identify alterations in the vaginal discharge (VD) metabolome and potential biomarkers to predict metritis development and a cure in dairy cows. This prospective cohort study was conducted on two dairies located in CA and TX. Vaginal discharge was evaluated and collected using the Metricheck
® device. Cows were examined for metritis at 4, 7, and 9 days in milk (DIM). Cows with a fetid, watery, and reddish-brown uterine discharge were classified as having metritis and randomized to receive ceftiofur ( n = 10) or remain untreated ( n = 7). A cure was defined as the absence of a fetid, watery, reddish-brown uterine discharge at 14 d after enrollment. Vaginal discharge samples were collected from 86 cows within 6 h after parturition, at 4 and 7 DIM, at metritis diagnosis, and at 4 and 7 days after metritis diagnosis. Cows with metritis (MET; n = 17) were paired with counterparts without metritis (HTH) of a similar DIM and parity ( n = 34). The uterine metabolome was evaluated using untargeted gas chromatography time-of-flight mass spectrometry (GC-TOF-MS). Metabolomic data were analyzed using the MetaboAnalyst 5.0. Data were log-transformed and auto-scaled for normalization. Univariate analyses, including the fold-change, were performed to identify the metabolites linked to metritis development and its cure and principal component analysis and partial least squares discriminant analysis were performed to explain metabolite variance between animals developing or not developing metritis and being cured or not being cured of metritis. Comparing HTH with MET cows at calving, 12 metabolites were upregulated, and one was downregulated. At four and seven DIM, 51 and 74 metabolites, respectively, were altered between MET and HTH cows. After metritis development, three and five metabolites were upregulated in cows that were cured and in cows that received treatment and were cured, respectively. In all scenarios, the metabolites lignoceric, malic, and maleic acids, ornithine, and hypotaurine, which are associated with arginine/aminoacyl-tRNA biosynthesis and taurine/purine metabolism, were upregulated in HTH cows. Metritis was associated with changes in the uterine metabolome. Cows not being cured of metritis had changes in the uterus metabolome independent of receiving ceftiofur or remaining untreated. Metabolome analysis may be an important tool to understand the vaginal discharge changes during postpartum and the dynamics of metritis development and cures and help to identify biomarkers to predict metritis being cured.- Published
- 2023
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23. Integration of statistical inferences and machine learning algorithms for prediction of metritis cure in dairy cows
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de Oliveira, E.B., primary, Ferreira, F.C., additional, Galvão, K.N., additional, Youn, J., additional, Tagkopoulos, I., additional, Silva-del-Rio, N., additional, Pereira, R.V.V., additional, Machado, V.S., additional, and Lima, F.S., additional
- Published
- 2021
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24. Antimicrobial stewardship on the dairy: Evaluating an on-farm framework for training farmworkers.
- Author
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Garzon A, Portillo R, Habing G, Silva-Del-Rio N, Karle BM, and Pereira RV
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- Female, Cattle, Animals, Humans, Farms, Farmers, Antimicrobial Stewardship, Anti-Infective Agents therapeutic use, Cattle Diseases drug therapy
- Abstract
Dairy farmworkers are commonly responsible for disease diagnosis and routine treatment decisions for cattle. This highlights the importance of farmworkers' knowledge and skills to successfully implement judicious use of antimicrobials in livestock production systems. The main objectives of this project were to develop and evaluate an on-farm educational program for farmworkers in antimicrobial stewardship in adult dairy cattle. A longitudinal quasi-experimental study design was used, by enrolling 12 conventional dairy farms in the United States (6 in California and 6 in Ohio). Farmworkers responsible for treatment decisions on the farm (n = 25) participated in a didactic and hands-on 12-wk antimicrobial stewardship training program led by the investigators. All antimicrobial stewardship training materials were available in Spanish and English. Interactive short videos with audio were developed to cover the learning objectives for each of the 6 teaching modules: antimicrobial resistance, treatment protocols, visual identification of sick animals, clinical mastitis, puerperal metritis, and lameness. Pre- and post-training assessments were administered using an online training assessment tool to evaluate changes in knowledge and attitudes about antimicrobial stewardship practices. Cluster analysis and multiple correspondence analyses were conducted to evaluate the association among categorical variables for participants' level of change in knowledge and its association with language, farm size, and state. A 32% average increase in knowledge was observed through an assessment conducted after completing the antimicrobial stewardship training, compared with the pre-training assessment. A significant improvement in 7 of 13 attitude questions related to antimicrobial stewardship practices on the farm was observed. Knowledge and attitude scores of participants on antimicrobial stewardship and identification of sick animals significantly improved after completing the antimicrobial stewardship training. The results observed in this study support the relevance of antimicrobial stewardship training programs targeting farmworkers to improve antimicrobial drug use knowledge and skills., (The Authors. Published by Elsevier Inc. and Fass Inc. on behalf of the American Dairy Science Association®. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).)
- Published
- 2023
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25. Factors affecting pregnancy loss for single and twin pregnancies in a high-producing dairy herd
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Silva-del-Río, N., Colloton, J.D., and Fricke, P.M.
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- 2009
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26. Effects of twin pregnancy and dry period feeding strategy on milk production, energy balance, and metabolic profiles in dairy cows
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Silva-del-Rio, N., Fricke, P.M., and Grummer, R.R.
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Cattle -- Physiological aspects ,Cattle -- Food and nutrition ,Pregnancy -- Research ,Animal feeding and feeds -- Composition ,Zoology and wildlife conservation - Abstract
The present study evaluated the interaction of pregnancy type [PT; single (S) vs. twin (T)] and dry period feeding management [D; close-up (CU) diet ([NE.sub.1] = 1.54 Mcal/kg of DM)] throughout the entire dry period (8W) vs. far-off (FO) diet ([NE.sub.1] = 1.32 Meal/kg of DM) from 60 to 21 d before expected calving date (ECD) followed by CU diet until calving (3W). Treatments were arranged in a 2 x 2 factorial with a randomized block design with primiparous (n = 8) and multiparous (n = 39) Holstein cows. We hypothesized that increasing the duration of feeding a CU diet would improve metabolic status and lactation performance for cows with T, but not for cows with S. All cows were fed similarly in late lactation (90 to 60 d before ECD; diet [NE.sub.1] = 1.58 Mcal/kg of DM) and in early lactation (calving to 105 DIM; diet [NE.sub.1] = 1.71 Meal// kg of DM). Prepartum DMI as percentage of BW did not differ (P > 0.10) with D but tended to be greater (P = 0.10) for cows with S than with T. Cows with T tended to have greater (P = 0.08) BW than cows with S, but conceptus-free BW was less (P = 0.001) for cows with T than for cows with S. No differences (P > 0.10) were detected in prepartum BCS or BCS change with PT or D. Energy balance (EB) was greater for cows with S than with T (P < 0.001) and for cows fed 8W vs. 3W (P = 0.01). Cows with T had greater (P < 0.001) NEFA and a tendency for greater liver triglycerides (TG; P = 0.07) and plasma [beta]-hydroxybutyrate (BHBA; P = 0.06) than cows with S. Prepartum cows fed 3W had greater (P = 0.01) liver TG and greater (P = 0.02) plasma NEFA, but less (P = 0.02) plasma BHBA than cows fed 8W. Plasma glucose (P < 0.004) and liver glycogen (P = 0.02) were less for cows with T but were not affected (P > 0.10) by D. Postpartum, there was no effect (P > 0.1) of PT or D on mean DMI as percentage of BW, BW, and BCS, but there was an interaction (P = 0.02) of PT x D for mean BCS. Cows that calved T were in a more positive (P = 0.004) EB than cows that calved S. Milk production was 5.2 kg/d greater (P = 0.04) for cows fed 8W; however, they were in less (P = 0.01) EB than cows that received 3W. Postpartum cows that calved T had decreased concentrations of plasma NEFA (P = 0.02) and liver TG (P = 0.04) but greater concentrations of plasma glucose (P = 0.03) than cows that calved S. Plasma BHBA (P = 0.07) and NEFA tended (P = 0.06) to be greater for cows that received 8W than 3W. Neither PT nor D affected (P > 0.1) plasma glucose and liver glycogen. There was a tendency for an interaction of PT x D for plasma NEFA and liver TG. In contrast to our hypothesis, response to D was independent of PT. Based on milk production data from the present experiment, 8W is a more desirable feeding strategy than 3W. Key words: close-up diet, dairy cow, metabolic status, twinning doi:10.2527/jas.2009-2206
- Published
- 2010
27. Observed frequency of monozygotic twinning in Holstein dairy cattle
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Silva del Río, N., Kirkpatrick, B.W., and Fricke, P.M.
- Published
- 2006
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28. Evaluation of antimicrobial resistance and risk factors for recovery of intrauterine Escherichia coli from cows with metritis on California commercial dairy farms.
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Basbas C, Garzon A, Silva-Del-Rio N, Byrne BA, Karle B, Aly SS, Champagne JD, Williams DR, Lima FS, Machado VS, and Pereira RV
- Subjects
- Animals, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Cattle, Cross-Sectional Studies, Drug Resistance, Bacterial, Escherichia coli, Farms, Female, Humans, Risk Factors, Cattle Diseases diagnosis, Cattle Diseases drug therapy, Cattle Diseases epidemiology, Chlortetracycline, Endometritis drug therapy, Endometritis epidemiology, Endometritis veterinary, Escherichia coli Infections drug therapy, Escherichia coli Infections epidemiology, Escherichia coli Infections veterinary, Oxytetracycline, Pelvic Inflammatory Disease
- Abstract
The goals of this study were to evaluate factors affecting recovery and antimicrobial resistance (AMR) in intrauterine E. coli in post-partum dairy cows with and without metritis from commercial California dairy farms. Using a cross-sectional study design, a total of 307 cows were sampled from 25 farms throughout California, from which a total of 162 intrauterine E. coli isolates were recovered. During farm visits, cows within 21 days post-partum were categorized in one of three clinical presentation groups before enrollment: metritis (MET, n = 86), defined as a cow with watery, red or brown colored, and fetid vaginal discharge; cows with purulent discharge (PUS, n = 106), defined as a non-fetid purulent or mucopurulent vaginal discharge; and control cows, (CTL, n = 115) defined as cows with either no vaginal discharge or a clear, non-purulent mucus vaginal discharge. Cows diagnosed as MET had significantly higher odds for recovery of E. coli compared to cows diagnosed as CTL (OR = 2.16, 95% CI: 1.17-3.96), with no significant difference observed between PUS and CTL, and PUS and MET. An increase in days in milk (DIM) at the time of sampling was significantly associated with a decrease in the odds ratio for E. coli recovery from intrauterine swabs (OR = 0.94, 95% CI: 0.89-0.98). All intrauterine E. coli were resistant to ampicillin (AMP), with an AMR prevalence of 30.2% and 33.9% observed for chlortetracycline and oxytetracycline, respectively. Only 8.6% of isolates were resistant to ceftiofur (CEFT), one of the most common drugs used to treat cows on farms sampled. No significant difference in the prevalence of AMR was observed among clinical groups at the individual cow level. At the farm level, a significantly higher odds for isolating intrauterine E. coli resistant to chlortetracycline (OR: 2.6; 95% CI: 3.7-58.0) or oxytetracycline (OR: 1.9; 95% CI: 1.4-33.8) was observed at farms that used an intrauterine infusion of oxytetracycline as a treatment for metritis when compared to those farms that did not use this practice. Findings from this study indicate the need for further research supporting a broader understanding of farm practices driving AMR in cows with metritis, as well as data to increase the accuracy of breakpoints for AMR classification of intrauterine E. coli from cattle., (© 2022. The Author(s).)
- Published
- 2022
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29. Defining clinical diagnosis and treatment of puerperal metritis in dairy cows: A scoping review.
- Author
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Garzon A, Habing G, Lima F, Silva-Del-Rio N, Samah F, and Pereira R
- Subjects
- Animals, Cattle, Female, Milk, Postpartum Period, Cattle Diseases diagnosis, Cattle Diseases drug therapy, Endometritis diagnosis, Endometritis drug therapy, Endometritis veterinary, Vaginal Discharge veterinary
- Abstract
Although puerperal metritis (PM) is a common infectious disease in dairy cattle, there are currently discrepancies between clinical case definitions within and between available peer-reviewed literature and on-farms practices. The inconsistent use of PM criteria across studies and on-farms practices can result in disparities related to recommendations for treating cows, affecting judicious use of antimicrobials. The objective of this study was to systematically review the peer-reviewed literature for clinical signs used for case definition of PM. The criteria used included local (e.g., vaginal discharge) and systemic clinical signs of infection (e.g., fever, drop in milk). The Preferred Reporting Items for Systematic Review and Meta-Analysis extension for scoping reviews protocols were used to screen commonly used databases. Following this protocol, one reviewer screened title and abstract for eligibility (n = 2,096), followed by full-text screening of selected articles (n = 396) by 2 reviewers to confirm eligible articles (n = 174). The most frequently cited reference article (37.5%) for the definition of PM was published in 2006, followed by articles published between 1998 and 2009 (13%). In 40.2% of articles, no reference was provided for definition of PM; vaginal discharge was described in terms of color, odor, and viscosity when related to the PM definition. Terms used for description of vaginal discharge color were red-brown (61.4%), red (5.1%), brown (8.6%), chocolate (4%), white (1.7%), yellow (0.5%), pink (5.7%), or gray (0.5%); vaginal discharge color was not reported in 24.1% articles. The vaginal discharge odor was described as fetid (75.8%), putrid (5.1%), foul (10.3%), or other (5.7%; e.g., abnormal, malodorous, odoriferous); odor was not mentioned in 7.4% of articles. The vaginal discharge viscosity was described as watery (74.1%), purulent (27%), mucopurulent (8.6%), thin (4%), serous (2.8%), or abnormal (2.3%) and was not mentioned in 11.5% of articles. Fever was included in 59.7% of articles as a criterion for PM diagnosis. The most used rectal temperature threshold was ≥39.5°C (56.8%), followed by ≥39.2°C (2.8%). Approaches used for vaginal discharge evaluation included rectal palpation (37.3%), intravaginal exploration with a gloved hand (18.4%), Metricheck (9.8%), or speculum (5.7%); and in 28.7% of articles, diagnostic tools used were not mentioned. Many of the color and odor vaginal discharge descriptions observed in the literature, used synonymous words to describe the same vaginal discharge sample, highlighting a lack of terminology consensus that could result in disagreements, especially due to the subjective character of these clinical evaluations of vaginal discharge color and odor. Although select consensus articles are available, it is common for studies to disregard a reference when defining PM cases. Furthermore, our findings highlight the need for a robust and clear consensus on criteria and terminology used to diagnose PM., (The Authors. Published by Elsevier Inc. and Fass Inc. on behalf of the American Dairy Science Association®. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).)
- Published
- 2022
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30. 0065 Management and dimensions of footbaths on California dairies
- Author
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Pineda, M., primary and Silva-del-Rio, N., additional
- Published
- 2016
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31. 1369 Close-up diet DCAD, urine pH, and total plasma calcium at calving on a commercial Jersey herd
- Author
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Valldecabres, A., primary, Rolle, D., additional, Ramírez, V. J., additional, Rodríguez, S., additional, and Silva-del-Rio, N., additional
- Published
- 2016
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32. 1374 Effects of prophylactic supplementation with oral calcium boluses on peripartum calcium, urine pH and health in a commercial Jersey herd supplemented with anionic salts
- Author
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Valldecabres, A., primary, Rolle, D., additional, Belaid, A., additional, Rodríguez, S., additional, and Silva-del-Rio, N., additional
- Published
- 2016
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33. Tuberculosis Prevalence Among US Crop-Workers, 2000 to 2012: Trends and Contributing Factors.
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Medel-Herrero A, Martínez-López B, Silva-Del-Rio N, Pires AF, Edmondson A, and Schenker M
- Subjects
- Adolescent, Adult, Databases, Factual, Economic Recession, Female, Health Services Accessibility, Humans, Insurance, Health, Language, Male, Medically Underserved Area, Prevalence, Risk Factors, Surveys and Questionnaires, Tuberculosis, Pulmonary ethnology, United States, Young Adult, Agriculture statistics & numerical data, Hispanic or Latino statistics & numerical data, Tuberculosis, Pulmonary epidemiology
- Abstract
Objective: We intend to study tuberculosis (TB) in one of the poorest communities in the US, hired agriculture workers, for most recent years (2000 to 2012) including the last recession period., Methods: Time-chart, simple mean differences, and logistic regressions were used to describe TB-prevalence and risk factors among US crop-workers. Data were drawn from the National Agricultural Workers Survey (NAWS)., Results: A high TB-prevalence was found among crop-workers with a dramatically increasing trend in recent years. Hispanic ethnicity, having farmworker family members, the presence of health insurance, and good spoken English were associated with an increased TB-prevalence., Conclusion: We found risk factors related to ethnicity and poor access to health care, a strong association between agriculture activity and TB, and an increase of TB-cases due to the 2008 downturn in this underserved population. We urge the health authorities to control this epidemic.
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- 2018
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34. Mineral concentrations in diets, water, and milk and their value in estimating on-farm excretion of manure minerals in lactating dairy cows
- Author
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Castillo, A.R., primary, St-Pierre, N.R., additional, Silva del Rio, N., additional, and Weiss, W.P., additional
- Published
- 2013
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35. Survey of dairy housing and manure management practices in California
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Meyer, D., primary, Price, P.L., additional, Rossow, H.A., additional, Silva-del-Rio, N., additional, Karle, B.M., additional, Robinson, P.H., additional, DePeters, E.J., additional, and Fadel, J.G., additional
- Published
- 2011
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36. Effects of Abomasal Infusion of Linseed Oil on Responses to Glucose and Insulin in Holstein Cows
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Pires, J.A.A., primary, Pescara, J.B., additional, Brickner, A.E., additional, Silva del Rio, N., additional, Cunha, A.P., additional, and Grummer, R.R., additional
- Published
- 2008
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37. Effects of Increasing Milking Frequency During the Last 28 Days of Gestation on Milk Production, Dry Matter Intake, and Energy Balance in Dairy Cows.
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Rastani, R. R., Silva del Rio, N., Gressley, T. F., Dahl, G. E., and Grummer, R. R.
- Subjects
- *
HOLSTEIN-Friesian cattle , *DAIRY cattle , *MILKING , *MILK yield , *PREGNANCY in animals , *CATTLE reproduction , *ANIMAL health - Abstract
Forty-eight Holstein cows were used in a randomized block design to evaluate different dry period lengths and prepartum milking frequencies (MF) on subsequent milk production, milk composition, solids-corrected milk production, dry matter intake (DMI), and energy balance. Lactating cows, milked 2 times/d, began a 7-d covariate period 35 d prior to the expected calving date. Cows were milked 0 times/d (0x), 1 time/d (1x), and 4 times/d (4x) for the last 28 d of gestation. If milk production decreased to less than 0.5 kg/milking or 1 kg/d, milking via machine ceased; however, teat stimulation continued 1 or 4 times/ d according to the treatment assignment. All cows were milked 2 times/d postpartum (wk 1 to 10). Prepartum DMI tended to be greater for lx and 4x compared with 0x. Prepartum, cows milked lx produced 17% less milk than cows milked 4x (5.9 and 7.1 kg/d, respectively). There were no differences in prepartum and postpartum body condition scores, body weights, and DMI. Postpartum milk production by cows following their third or greater gestation was greater for 0x and 4x compared with 1x. Postpartum milk production by cows following their second gestation was significantly decreased with increased MF (0x vs. 1x and 4x). Regardless of parity, postpartum solids-corrected milk was greater for 0x compared with 1x and 4x. Postpartum fat yield was greater for 0x vs. 4x, with lx being intermediate. Postpartum protein yield was greater for 0x vs. 4x, whereas 0x tended to have greater protein yield than lx. Postpartum energy balance was greater for 1x and 4x relative to 0x. Continuous milking (1x and 4x) resulted in a loss of milk production in the subsequent lactation for cows following their second gestation; however, for cows following their third or greater gestation, increasing the MF from 1x to 4x in the last 28 d of gestation alleviated the loss in milk production. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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38. Saliva as a Potential Source of Biomarkers in Cows with Metritis: A Pilot Study.
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Vallejo-Mateo, Pedro J., Contreras-Aguilar, María D., Muñoz-Prieto, Alberto, Botia, María, Tvarijonaviciute, Asta, Rubio, Camila Peres, Zelvyte, Rasa, Cerón, José J., and Franco-Martínez, Lorena
- Subjects
ADENOSINE deaminase ,ANIMAL welfare ,CREATINE kinase ,ASPARTATE aminotransferase ,DAIRY farms ,HAPTOGLOBINS ,SALIVA - Abstract
Simple Summary: Metritis, a condition affecting up to 20% of cows after giving birth, negatively impacts animal welfare and dairy farm profitability by reducing productivity and reproduction. This study compared the biochemical profiles of healthy cows and those with metritis, analyzing 25 salivary and 31 serum analytes alongside various health parameters. Key findings showed that cows with metritis had elevated levels of certain biomarkers related to stress, inflammation, and metabolism in both saliva and serum. Specifically, eight salivary biomarkers including adenosine deaminase (ADA) and haptoglobin (Hp) and eight serum biomarkers including ADA, Hp, and serum amyloid A (SAA) were significantly higher in affected cows. In contrast, six biomarkers including total esterase (TEA) and albumin were lower in the serum. This study highlights the potential of using saliva as a non-invasive source for identifying biomarkers in cows with metritis, offering a new approach to diagnose and manage this condition. Metritis affects 5–20% of cows after parturition, negatively impacting animal welfare and the profitability of dairy farms, increasing culling rates and costs, and decreasing productivity and reproduction rates. This study compared the results of a comprehensive biochemical panel consisting of 25 salivary and 31 serum analytes between healthy cows (n = 16) and cows with metritis (n = 12). Descriptive parameters such as depression, rectal temperature, body condition score (BCS), heart rate, respiratory rate, mucous color, ruminal motility, vaginal discharge, milk production, and complete hematology analyses were also assessed for comparative purposes. The biochemistry analytes comprised five analytes related to stress, five to inflammation, five to oxidative status, and nineteen to general metabolism. The two-way ANOVA analysis revealed that, in saliva, eight biomarkers (lipase, adenosine deaminase (ADA), haptoglobin (Hp), total proteins, g-glutamyl transferase (gGT), aspartate aminotransferase (AST), alkaline phosphatase (ALP), and creatine kinase (CK)) were significant higher in cows with metritis. In serum, eight biomarkers (ADA, Hp, serum amyloid A (SAA), fibrinogen, ferritin, AOPPs/albumin ratio, non-esterified fatty acids (NEFAs), and bilirubin) were significantly higher in cows with metritis, whereas six (total esterase (TEA), albumin, urea, lactate, phosphorus, and calcium) were lower. Of the total number of 23 biomarkers that were measured in both saliva and serum, significant positive correlations between the two biofluids were found for six of them (Hp, FRAP, CUPRAC, AOPPs, urea, and phosphorus). Urea showed an R = 0.7, and the correlations of the other analytes were weak (R < 0.4). In conclusion, cows with metritis exhibited differences in biomarkers of stress, inflammation, cellular immune system, and general metabolism in both salivary and serum biochemistry profiles. These changes were of different magnitudes in the two biofluids. In addition, with the exception of ADA and Hp, the analytes that showed changes in the saliva and serum profiles of cows affected by metritis were different. Overall, this report opens a new window for the use of saliva as potential source of biomarkers in cows with metritis. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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39. Assessing the Impact of On-Farm Biosecurity Coaching on Farmer Perception and Farm Biosecurity Status in Belgian Poultry Production.
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Amalraj, Arthi, Van Meirhaeghe, Hilde, Chantziaras, Ilias, and Dewulf, Jeroen
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BIOSECURITY ,PSEUDOPOTENTIAL method ,WATER supply ,FARMERS ,INFORMATION resources ,POULTRY - Abstract
Simple Summary: Effective communication between farmers and veterinarians enables the careful assessment of biosecurity aspects, often leading to mutual agreement over on-farm changes. Coaching is a learner-driven process in which the coach is not simply providing advice or direction but rather enabling the learner to identify a goal and find solutions. Farmers' readiness to accept changes is pivotal to biosecurity applications, and the recognition of the barriers to change is highlighted in the study. Numerous farmers in this study have embraced the action plan, indicating that offering tailored guidance through direct face-to-face coaching in a few specific areas has the potential to be an effective approach for disseminating biosecurity information. The farmers showed a positive response to the individualized coaching, particularly considering that it came from individuals who were not their usual source of biosecurity information. The authors have found success in enhancing farm biosecurity procedures with coaching using the two complementary scoring tools ADKAR
® (Mont-Saint-Guibert, Belgium) and Biocheck.UGentTM (Dentergem, Belgium). Veterinary coaching was tested to assess its efficacy in promoting adherence to biosecurity procedures. Poultry farmers (n = 13) in Belgium were profiled using ADKAR® , coached and audited prior to and 6 months after coaching. The ADKAR® (Awareness, Desire, Knowledge, Ability, and Reinforcement) profiling technique identified 5/13 participating farmers with relatively low scores (≤3) for one or more elements that block change (biosecurity compliance in this case). Education was the only demographic variable that influenced knowledge scores. Through the Biocheck.UgentTM methodology, farm biosecurity was assessed and benchmarked to allow for tailored guidance. The farmer, farm veterinarian, and coach defined a farm-specific action plan that covered infrastructure, site access, staff/visitors, purchase policies, transport and depopulation, feed and water supplies, flock management, cleaning and disinfection between flocks, and measures between houses. From a total of 49 proposed actions, 36 were adopted. Purchasing policy had the highest (100%) and cleaning and disinfection had the lowest compliance (38%). Time, cost, and feasibility (e.g., inadequate farm layout) were the main reasons cited for not implementing action points. Overall, biosecurity improved significantly (p = 0.002) from 67.1 ± 5.7% to 70.3 ± 5.7% (mean ± Std. dev). The study, hence, presents convincing proof of how coaching can lead to new solutions not previously considered. [ABSTRACT FROM AUTHOR]- Published
- 2024
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40. Antimicrobial Resistance and Use on Chinese Dairy Farms: Awareness and Opinions Regarding Selective Treatments of Farm Managers.
- Author
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Xiong, Yindi, Barkema, Herman W., Yang, Jingyue, Kastelic, John P., Nobrega, Diego B., Li, Xiaoping, Tong, Xiaofang, Fan, Zhenying, and Gao, Jian
- Subjects
HEALTH of cattle ,DRY farming ,FARM management ,DAIRY farms ,DRUG resistance in microorganisms - Abstract
Background: In China's expanding dairy industry, a lack of oversight regarding antimicrobial use and increasing antimicrobial resistance are evident. Selective treatments of dairy cows for clinical mastitis or dry cow therapy are proposed to promote judicious antimicrobial use without adversely impacting cattle health. These approaches have been successfully implemented on farms in other countries. Methods: On 28 October 2023, a 2-day in-person seminar was held in Beijing, China, on selective antimicrobial treatments of dairy cows for clinical mastitis or dry cow therapy on large Chinese dairy farms. Concurrently, a qualitative study involving 15 technical managers from the 13 largest Chinese dairy groups used focus group discussions and questionnaires to explore perspectives on selective treatments of dairy cows for clinical mastitis or dry cow therapy. The main outcomes assessed were opinions and concerns regarding implementing selective antimicrobial treatments. Results: Although there was diversity of cognition on AMR and selective treatments, the technical managers were generally positive regarding adoption of selective treatments. However, they expressed a need for more evidence and tools, including anticipated economic impacts, effects of delaying treatment until diagnosis, accurate interpretation of milk recording data, safe use of internal teat sealants, and spread of pathogens. Participants stressed the need for awareness, staff training, farm management, and China-specific standards, suggesting large-scale trials to assess efficacy of selective treatments. Conclusion: The findings revealed key challenges and barriers currently impeding selective AMU practices. These insights could inform efforts to promote judicious AMU on farms through targeted treatment regimens, reducing mounting selective pressure driving resistance. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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- View/download PDF
41. Management of dry and transition cows to improve energy balance and reproduction.
- Author
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Grummer RR, Wiltbank MC, Fricke PM, Watters RD, and Silva-Del-Rio N
- Subjects
- Aging, Animals, Cattle Diseases diet therapy, Cattle Diseases therapy, Diet, Female, Lactation physiology, Lactation Disorders diet therapy, Lactation Disorders therapy, Lactation Disorders veterinary, Milk metabolism, Postpartum Period physiology, Pregnancy, Time Factors, Cattle physiology, Dairying methods, Energy Metabolism physiology, Reproduction physiology
- Abstract
Fertility of dairy cows has decreased for the past several decades. Measures of energy balance (EB; e.g., change in EB, EB nadir, cumulative negative EB, or duration of negative EB) are related to reproductive performance. Our research group has concluded that modification of diets fed during the dry or transition period are unlikely to have significant effects on postpartum EB and fertility. Rather, more radical alterations in dairy management are needed if energy status of postpartum cows is to be improved. We have examined the potential to alter EB by shortening or eliminating the dry period. In an initial study, the effects of a 56, 28, and 0 d dry period on ovarian dynamics and reproductive performance of dairy cows were examined. Postpartum EB was improved by reducing the dry period; however, only significantly for the 0 d dry period. Cows on the 0 d dry period did not experience negative EB. Improvements in EB were a reflection of lower milk production and greater feed intake. Consistent with the improvements in EB, time to first ovulation and first service, first service conception rate, services per conception, and days open were all improved by reduction of dry period length. Because small animal numbers were used in the study, a second study was conducted on a commercial dairy with many more animals to determine if results from the initial trial could be duplicated. A comparison was made between a 55 and 34 d dry period. Shortening the dry period resulted in fewer days to first ovulation, fewer days open, and a greater percentage of cows pregnant at 150 days in milk, although the improvements in the latter two variables were only significant for cows in their third or greater lactation. A current study is being performed in a large commercial dairy to examine the effects of eliminating the dry period on reproduction utilizing a large commercial dairy.
- Published
- 2010
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42. A new system of phosphorus and calcium requirements for lactating dairy cows.
- Author
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Oliveira, André Soares de and Soares, Suziane Rodrigues
- Subjects
STANDARD deviations ,NUTRITIONAL requirements ,DAIRY cattle ,ECONOMIC efficiency ,SUSTAINABILITY ,LACTATION in cattle - Abstract
Accurately predicting phosphorous (P) and calcium (Ca) dietary requirements is critical for optimizing dairy cattle performance, and minimizing mineral excretions and ecosystems eutrophication. This study provides a new factorial system to determine net and dietary P and Ca requirements for maintenance and lactation, derived from a meta-regression of mineral trials involving lactating dairy cows. A comprehensive global database was constructed from 57 peer-reviewed articles of mineral balance trials, with a wide range of dietary and animal performance data. We estimated the net requirements for maintenance from the intercept of a nonlinear equation between mineral intake and the sum of total fecal and urinary excretions, which is an estimate of endogenous mineral loss. Mineral secreted in milk was used to obtain net requirements for lactation. The mineral metabolizable coefficient was quantified through observed (treatment means) mineral intake and total fecal and urinary excretions, discounting the estimated endogenous excretions from our proposed models. The nonlinear models of total fecal and urinary mineral excretion were evaluated (observed versus predicted values) using a 5-fold cross validation approach. The models to estimate the sum of endogenous fecal and urinary excretions of P (0.135
±0.043 g P/kg BW0.75 ) and Ca (0.360±0.144 g Ca/kg BW0.75 ) exhibited suitable precision and accuracy; r = 0.89 and 0.79, concordance correlation coefficient = 0.85 and 0.77, and root mean square prediction error = 24.1 and 20.5% observed means, respectively. Dietary variables (forage level, fiber, starch, crude protein, and ether extract) did not affect the metabolizable coefficient (MC) of P and Ca; therefore, an overall dietary MC of P (0.69±0.01 ) and Ca (0.65±0.02 ) were proposed. Our new system estimates lower net and dietary P requirements for lactating dairy cows compared to the NASEM-2021 and NRC-2001 models, but slightly higher Ca requirements than NASEM-2021.This proposed system holds potential to reduce the use of phosphorus in diets for dairy cows, and thus to enhance economic efficiency and environmental sustainability of the dairy industry. [ABSTRACT FROM AUTHOR]- Published
- 2024
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43. A Review of Options and Costs for Mitigating GHG Emissions from the U.S. Dairy Sector.
- Author
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Lei, Yuhong, Cheng, Muxi, McCarl, Bruce, and Cessna, Jerry
- Subjects
LITERATURE reviews ,GREENHOUSE gases ,PRODUCT life cycle assessment ,FARM produce ,COST analysis - Abstract
The U.S. dairy sector is a significant emitter of methane and nitrous oxide, with the US EPA estimating it produced around 90 Tg CO
2 eq. in 2021. This paper reviews the literature on and evaluates various mitigation actions for reducing GHG emissions in the U.S. dairy sector, focusing on both direct and indirect emission sources. We conducted a narrative literature review based on the cradle to gate life-cycle assessment method, covering the entire dairy supply chain up until milk enters retail establishments, including dairy and feed producing farm practices, processing, transportation, and their associated emissions/costs. The papers included were selected over a three year process depending on discussions with experts and issues mentioned in the emerging literature. We review significant opportunities for the U.S. dairy sector to reduce emissions, particularly through improved enteric fermentation and manure management practices. Additionally, we cover the potential for mitigating indirect emissions from feed production, processing, and transportation, areas less frequently covered in existing studies. This review also covers a gap in the literature by integrating economic findings including cost analysis and incentives to mitigate based on the social value of emissions reductions. [ABSTRACT FROM AUTHOR]- Published
- 2024
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44. The Identification of Manure Spreading on Bare Soil through the Development of Multispectral Indices from Sentinel-2 Data: The Emilia-Romagna Region (Italy) Case Study.
- Author
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Dubbini, Marco, Belluzzo, Maria, Zanni Bertelli, Villiam, Pirola, Alessandro, Tornato, Antonella, and Alessandrini, Cinzia
- Subjects
MANURES ,SOIL formation ,THEMATIC maps ,SPECTRAL sensitivity ,REMOTE sensing ,LAND cover - Abstract
Satellite remote sensing is currently an established, effective, and constantly used tool and methodology for monitoring agriculture and fertilisation. At the same time, in recent years, the need for the detection of livestock manure and digestate spreading on the soil is emerging, and the development of spectral indices and classification processes based on satellite multispectral data acquisitions is growing. However, the application of such indicators is still underutilised and, given the polluting impact of livestock manure and digestate on soil, groundwater, and air, an in-depth study is needed to improve the monitoring of this practice. Additionally, this paper aims at exposing a new spectral index capable of detecting the land affected by livestock manure and digestate spreading. This indicator was created by studying the spectral response of bare soil and livestock manure and digestate, using Copernicus Sentinel-2 MSI satellite acquisitions and ancillary datasets (e.g., soil moisture, precipitation, regional thematic maps). In particular, time series of multispectral satellite acquisitions and ancillary data were analysed, covering a survey period of 13 months between February 2022 and February 2023. As no previous indications on fertilisation practices are available, the proposed approach consists of investigating a broad-spectrum area, without investigations of specific test sites. A large area of approximately 236,344 hectares covering three provinces of the Emilia-Romagna Region (Italy) was therefore examined. A series of ground truth points were also collected for assessing accuracy by filling in the confusion matrix. Based on the definition of the spectral index, a value of the latter greater than three provides the most conservative threshold for detecting livestock manure and digestate spreading with an accuracy of 62.53%. Such results are robust to variations in the spectral response of the soil. On the basis of these very encouraging results, it is considered plausible that the proposed index could improve the techniques for detecting the spreading of livestock manure and digestate on bare ground, classifying the areas themselves with a notable saving of energy compared to the current investigation methodologies directly on the ground. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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- View/download PDF
45. Machine Learning to Predict Pregnancy in Dairy Cows: An Approach Integrating Automated Activity Monitoring and On-Farm Data.
- Author
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Marques, Thaisa Campos, Marques, Letícia Ribeiro, Fernandes, Patrick Bezerra, de Lima, Fabio Soares, do Prado Paim, Tiago, and Leão, Karen Martins
- Subjects
DAIRY cattle ,MACHINE learning ,CATTLE fertility ,ESTRUS ,PREGNANCY outcomes ,PREGNANCY ,SUPPORT vector machines - Abstract
Simple Summary: Scientists have developed a way to more accurately predict when dairy cows are most likely to become pregnant using automated activity monitoring (AAM) systems to track their activity. These systems track the cow's movement and behavior in real time, which is crucial for determining the best time for artificial insemination (AI). This study used data from over a thousand Holstein cows to create a mathematical model that predicts pregnancy chances at the time of AI, considering not just the cow's activity data but also individual health, the environment, and even the specific bull used for insemination. This study found that combining on-farm data (like health and environmental conditions) with the AAM data gives a clearer picture of a cow's pregnancy chances compared to using AAM data alone. The random forest model, one of the mathematical methods used, was particularly good at reducing errors in prediction. This research suggests that merging detailed farm data with automated monitoring can greatly improve the predictions of pregnancy at the time of AI, which is beneficial for managing dairy cow reproduction efficiently. Automated activity monitoring (AAM) systems are critical in the dairy industry for detecting estrus and optimizing the timing of artificial insemination (AI), thus enhancing pregnancy success rates in cows. This study developed a predictive model to improve pregnancy success by integrating AAM data with cow-specific and environmental factors. Utilizing data from 1,054 cows, this study compared the pregnancy outcomes between two AI timings—8 or 10 h post-AAM alarm. Variables such as age, parity, body condition, locomotion, and vaginal discharge scores, peripartum diseases, the breeding program, the bull used for AI, milk production at the time of AI, and environmental conditions (season, relative humidity, and temperature–humidity index) were considered alongside the AAM data on rumination, activity, and estrus intensity. Six predictive models were assessed to determine their efficacy in predicting pregnancy success: logistic regression, Bagged AdaBoost algorithm, linear discriminant, random forest, support vector machine, and Bagged Classification Tree. Integrating the on-farm data with AAM significantly enhanced the pregnancy prediction accuracy at AI compared to using AAM data alone. The random forest models showed a superior performance, with the highest Kappa statistic and lowest false positive rates. The linear discriminant and logistic regression models demonstrated the best accuracy, minimal false negatives, and the highest area under the curve. These findings suggest that combining on-farm and AAM data can significantly improve reproductive management in the dairy industry. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
46. Evaluation of the hoof's temperature variations depending on lesion presence, measurement points and leg position.
- Author
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BOBIC, TINA, MIJIC, PERO, GREGIC, MAJA, and GANTNER, VESNA
- Subjects
HOOFS ,DAIRY cattle ,SURFACE temperature ,THERMOGRAPHY ,TEMPERATURE - Abstract
In order to determine the possibility of using infrared thermography (IRT) in preventing lameness in dairy cows, the aim of this study was to evaluate temperature variations depending on the lesion presence, measurement points and leg position. The study used about 3 000 IRT records from 60 Holstein cows housed in a free-stall barn. Surface temperature measurements were taken at two regions of the hooves: the region of the coronary band, and the region of the skin up to 2 cm above the coronary band. A highly significant (P = 0.004; 0.006, P < 0.01) difference in temperature was observed between healthy and diseased legs at both measurement points. Additionally, a significant (P = 0.029; 0.037; 0.045; 0.012; 0.018, P < 0.05) or highly significant (P = 0.004; 0.006, P < 0.01) difference in temperature values between the front and rear legs was established for both measurement points, i.e., the coronary band and the skin. Despite confirming the potential applicability of infrared thermography in the detection of lameness, it is crucial to consider the significant influences of the environmental factors, impurities, and animal-related factors. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
47. Effects of abomasal infusion of water linseed oil or tallow on responses to glucose and insulin challenges in feed restricted Holstein cows
- Author
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José A.A. Pires, Pescara, J. B., Silva Del Rio, N., Cunha, A. P., and Grummer, R. R.
48. Effects of adding bile acids to dietary storage japonica brown rice on growth performance, meat quality, and intestinal microbiota of growing-finishing Min pigs.
- Author
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Chuanqi Wang, Kexin Zheng, Dali Wang, Hao Yu, Yun Zhao, Hengtong Fang, and Jing Zhang
- Subjects
BROWN rice ,GUT microbiome ,MEAT quality ,BILE acids ,BLOOD urea nitrogen - Abstract
Introduction: This study investigated the effects of storage japonica brown rice (SJBR) and bile acids (BA) on the growth performance, meat quality, and intestinal microbiota of growing-finishing Min pigs. Methods: A total of 24 healthy Min pigs with a similar body weight of 42.25 ± 2.13 kg were randomly divided into three groups with eight replicates of one pig each. The groups were as follows: CON (50% corn), SJBR (25% corn +25% SJBR), and SJBR + BA (25% corn +25% SJBR +0.025% hyodeoxycholic acid). The experimental period lasted from day 90 (the end of the nursery phase) to day 210 (the end of the finishing phase). Results: The results showed the following: (1) Compared with the CON group, there was no significant difference in the average daily gain (ADG) and average daily feed intake (ADFI) of the SJBR and SJBR + BA groups, and the feed conversion ratio (FCR) was significantly decreased (p < 0.05). (2) Compared with the CON group, the total protein (TP) content in the serum was significantly increased, and the blood urea nitrogen (BUN) content was significantly decreased (p < 0.05) in the SJBR and SJBR + BA groups; moreover, HDL-C was significantly higher by 35% (p < 0.05) in the SJBR + BA group. (3) There were no significant differences in carcass weight, carcass length, pH, drip loss, cooking loss, and shear force among the groups; the eye muscle area was significantly increased in the SJBR group compared with the CON group (p < 0.05); back fat thickness was significantly decreased in the SJBR + BA group compared with the SJBR group (p < 0.05); and the addition of SJBR significantly increased the mRNA expression of MyHC I in the longissimus dorsi (LD) muscle of growing-finishing Min pigs (p < 0.05). (4) The cecal bacteria were detected using 16S rDNA, and the proportion of Lactobacillus was increased gradually at the genus level, but there was no significant difference among the different groups. Conclusion: In conclusion, 25% SJBR can improve the growth performance and increase the abundance of intestinal beneficial bacteria, and based on this, adding bile acids can reduce the back fat thickness of growing-finishing Min pigs. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
49. Propaedeutic and Therapeutic Practices Used for Retained Fetal Membranes by Rural European Veterinary Practitioners.
- Author
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Hanzen, Christian and Rahab, Hamza
- Abstract
Simple Summary: A cow is considered to have a retained placenta (RP) when the fetal membranes are visible at the vulva or identified in the uterus more than 24 h after calving. The problem of retained fetal membranes concerns dairy cattle more than beef cattle. This pathology is a major risk factor for uterine infections, ketosis and mastitis. It delays the postpartum resumption of cyclic ovarian function. This pathology also has economic consequences relating to increased veterinarian costs, the risk of culling rate, decreased milk production and reproduction performances. The main observations resulting from our survey of 700 practitioners across five European countries are as follows: abortion and twinning remain the main causes of retained fetal membranes; vaginal exploration remains the main diagnostic method used by veterinarians; more than half of veterinarians attempt to manually remove the placenta; tetracyclins, cefapirin and penicillins are the most used intrauterine antibiotics; and PGF2α, NSAID, homeopathy and oxytocin are used by a huge number of veterinarians. Our study confirms the necessity to improve and rationalize the diagnostic and therapeutic approach of the RFM, mainly in the context of the different measures to reduce the important problem of antibiotic resistance. The present study aimed to monitor the practices of European veterinarians for the diagnosis and treatment of retained fetal membranes in cattle. A questionnaire was established and distributed to veterinarians from five European countries. A total of 700 veterinarians participated in the survey. A vaginal examination, general examination and uterine palpation are carried out by 71%, 38% and 23% of veterinarians, respectively. Moreover, half of the veterinarians attempt to remove the placenta manually, 70% of them administer a combined local and general treatment if the cow has a fever (more than 39.5 °C), and 50% of them only administer IU treatment if no fever is observed. Tetracyclins, cefapirin and penicillins are the most used intrauterine (IU) antibiotics, whereas penicillin is the most used parenteral one. All other European veterinarians were less likely to use cefapirin and more likely to use oxytocin, Ca perfusion and NSAID than French and Walloon veterinarians. In conclusion, our study confirms the necessity of improving and rationalizing the diagnostic and therapeutic approach of the RFM, mainly to reduce the important problem of antibiotic resistance. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
50. Molecular Mechanisms Associated with the Development of the Metritis Complex in Dairy Cattle.
- Author
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Sanchez, Leanna, Campos-Chillon, Fernando, Sargolzaei, Mehdi, Peterson, Daniel G., Sprayberry, Kim A., McArthur, Garry, Anderson, Paul, Golden, Bruce, Pokharel, Siroj, and Abo-Ismail, Mohammed K.
- Subjects
DAIRY cattle ,CHOLESTEROL metabolism ,GENOME-wide association studies ,GENETIC variation ,UTERINE diseases ,METABOLIC regulation - Abstract
The metritis complex (MC), a group of post-partum uterine diseases, is associated with increased treatment costs and reduced milk yield and fertility. The goal of this study was to identify genetic variants, genes, or genomic regions that modulate MC disease. A genome-wide association study was performed using a single-locus mixed linear model of 1967 genotypes (624,460 SNPs) and metritis complex records. Then, in-silico functional analyses were performed to detect biological mechanisms and pathways associated with the development of MC. The ATP8A2, COX16, AMN, and TRAF3 genes, located on chromosomes 12, 10, and 21, were associated with MC at p ≤ 0.0001. These genes are involved in the regulation of cholesterol metabolism in the stromal tissue of the uterus, which can be directly associated with the mode of transmission for pathogens causing the metritis complex. The modulation of cholesterol abundance alters the efficiency of virulence factors and may affect the susceptibility of the host to infection. The SIPA1L1, DEPDC5, and RNF122 genes were also significantly associated with MC at p ≤ 0.0001 and are involved in the PI3k-Akt pathway, responsible for activating the autophagic processes. Thus, the dysregulation of these genes allows for unhindered bacterial invasion, replication, and survival within the endometrium. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
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