2,504 results on '"Shido K"'
Search Results
2. 188 The development of AI for visualizing PPP
- Author
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Shido, K., primary, Kojima, K., additional, Yamamoto, T., additional, Hayama, K., additional, Hirayama, A., additional, Kobayashi, S., additional, Okura, M., additional, Abe, N., additional, Okubo, Y., additional, Yamasaki, K., additional, Asano, Y., additional, and Terui, T., additional
- Published
- 2023
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3. 321 The largest GWAS for IgE levels in a single population
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Shido, K., primary, Kojima, K., additional, Yamasaki, K., additional, Kinoshita, K., additional, and Asano, Y., additional
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- 2022
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4. Ehlers-Danlos syndrome type IV with a novel COL3A1 exon 14 skipping variation confirmed by Tohoku Medical Megabank Organization genomic database.
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Shido K, Kojima K, Yoshida-Akai S, Kikuchi K, Hatamochi A, Aiba S, and Yamasaki K
- Subjects
- Cohort Studies, Collagen, Collagen Type III genetics, Exons, Female, Genomics, Humans, Mutation, Ehlers-Danlos Syndrome diagnosis, Ehlers-Danlos Syndrome genetics
- Abstract
A novel COL3A1 variant was identified in a Japanese case of Ehlers-Danlos syndrome type IV (EDS-IV) with a characteristic "Madonna" face, fragile uterus, and easy bruising in addition to a history of cavernous sinus fistula. We confirmed variable diameters of collagen fibrils in the dermis and decrease in type 3 collagen production from cultured fibroblasts. Genomic DNA sequencing of the COL3A1 region and COL3A1 cDNA sequence expressing in cultured fibroblasts identified that a nucleotide variation at c.951+2T>G on intron 14 leads to skipping of exon 14 in COL3A1 cDNA. The novel variation in the splice site of COL3A1 region g.IVS14+2T>G was not listed in the EDS-IV pathogenic genetic databases including Human Gene Mutation Database, ClinVar, and Leiden Open Variation Database. Using the whole genome sequence database of 8380 Japanese individuals reported by the Tohoku Medical Megabank Organization (ToMMo) cohort study, we also confirmed that COL3A1 g.IVS14+2T>G was not a common single nucleotide variation in the Japanese population, although 13 EDS-related COL3A1 variants were identified in the ToMMo database of 8380 Japanese individuals. These results demonstrated that our case of EDS-IV was a result of the novel variation of COL3A1 g.IVS14+2T>G. These statistical genetics approaches with the combination of the ToMMo database of 8380 Japanese individuals and pathogenic genetic databases are a useful method to confirm the uniqueness of novel variation in Japanese., (© 2021 Japanese Dermatological Association.)
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- 2021
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5. E-CEL UVEC Cells As an Adjunct Cell Therapy for the Arthroscopic Rotator Cuff Repair in Adults
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Angiocrine Bioscience
- Published
- 2024
6. A retrospective study evaluating the outcomes of high‐dose methylprednisolone pulse therapy for 483 patients with moderate‐to‐severe alopecia areata
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Wada‐Irimada, M., primary, Mizuashi, M., additional, Takahashi, T., additional, Tojo, G., additional, Onami, K., additional, Shido, K., additional, Otake, E., additional, Yusa, S., additional, Tanita, K., additional, Yamazaki, E., additional, Aiba, S., additional, and Yamasaki, K., additional
- Published
- 2021
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7. Convolutional neural network-based skin image segmentation model to improve classification of skin diseases in conventional and non-standardized picture images.
- Author
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Yanagisawa Y, Shido K, Kojima K, and Yamasaki K
- Subjects
- Humans, Neural Networks, Computer, Diagnosis, Computer-Assisted methods, Sensitivity and Specificity, Image Processing, Computer-Assisted methods, Skin Diseases diagnostic imaging, Skin Neoplasms diagnostic imaging
- Abstract
Background: For dermatological practices, non-standardized conventional photo images are taken and collected as a mixture of variable fields of the image view, including close-up images focusing on designated lesions and long-shot images including normal skin and background of the body surface. Computer-aided detection/diagnosis (CAD) models trained using non-standardized conventional photo images exhibit lower performance rates than CAD models that detect lesions in a localized small area, such as dermoscopic images., Objective: We aimed to develop a convolutional neural network (CNN) model for skin image segmentation to generate a skin disease image dataset suitable for CAD of multiple skin disease classification., Methods: We trained a DeepLabv3 + -based CNN segmentation model to detect skin and lesion areas and segmented out areas that satisfy the following conditions: more than 80% of the image will be the skin area, and more than 10% of the image will be the lesion area., Results: The generated CNN-segmented image database was examined using CAD of skin disease classification and achieved approximately 90% sensitivity and specificity to differentiate atopic dermatitis from malignant diseases and complications, such as mycosis fungoides, impetigo, and herpesvirus infection. The accuracy of skin disease classification in the CNN-segmented image dataset was almost equal to that of the manually cropped image dataset and higher than that of the original image dataset., Conclusion: Our CNN segmentation model, which automatically extracts lesions and segmented images of the skin area regardless of image fields, will reduce the burden of physician annotation and improve CAD performance., Competing Interests: Conflict of Interest The authors have no conflict of interest to declare. The study partially used a research grant from Maruho Co., Ltd., but Maruho does not have any influences on the design, results, and publication of the study., (Copyright © 2023 Japanese Society for Investigative Dermatology. Published by Elsevier B.V. All rights reserved.)
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- 2023
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8. A new method for the preparation of high-purity CO 2 -absorbing Li 3 NaSiO 4 powder using lithium silicate and sodium carbonate.
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Iwasaki S, Shido K, and Hashimoto T
- Abstract
The starting materials and temperature for the preparation of Li
3 NaSiO4 powder, which has attracted attention as a CO2 absorbent, were optimized in this study. Mixtures of Li2 CO3 , Na2 CO3 , and SiO2 as well as Li4 SiO4 , Li2 SiO3 , and Na2 CO3 were subjected to thermogravimetry-differential thermal analysis (TG-DTA) to elucidate their reaction mechanisms. The phase, morphology, specific surface area, and CO2 absorption characteristics of the powder specimens that were obtained by heating the two mixtures were examined by X-ray diffraction (XRD), secondary electron microscopy (SEM), N2 adsorption isotherm and isothermal TG-DTA. Melted LiNaCO3 was generated via the heat treatment of the Li2 CO3 , Na2 CO3 , and SiO2 powder mixture, yielding a low-purity bulk specimen with inhomogeneous particle size. However, the use of the Li4 SiO4 , Li2 SiO3 , and Na2 CO3 mixture as a starting material ensured that no liquid phase was generated during heat treatment and successfully yielded Li3 NaSiO4 powder which was purer than the product derived from the Li2 CO3 /Na2 CO3 /SiO2 mixture, presumably because of the lower volatility of Li and Na in the solid phase than that in the liquid phase of LiNaCO3 . The Li3 NaSiO4 powder derived from Li4 SiO4 , Li2 SiO3 , and Na2 CO3 showed a slightly larger surface area with homogeneous particle size and almost identical CO2 absorption kinetics compared to those of the product obtained from Li2 CO3 , Na2 CO3 , and SiO2 , in addition to absorbing a higher amount of CO2 owing to its higher purity.- Published
- 2022
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9. 883 ‘DermAnnotation’ is All You Need; methodology to transfer knowledges of dermatologists to artificial intelligence
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Shido, K., primary, Kondo, E., additional, Kojima, K., additional, Yamasaki, K., additional, and Aiba, S., additional
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- 2020
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10. Adaptable haemodynamic endothelial cells for organogenesis and tumorigenesis.
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Palikuqi B, Nguyen DT, Li G, Schreiner R, Pellegata AF, Liu Y, Redmond D, Geng F, Lin Y, Gómez-Salinero JM, Yokoyama M, Zumbo P, Zhang T, Kunar B, Witherspoon M, Han T, Tedeschi AM, Scottoni F, Lipkin SM, Dow L, Elemento O, Xiang JZ, Shido K, Spence JR, Zhou QJ, Schwartz RE, De Coppi P, Rabbany SY, and Rafii S
- Subjects
- Blood Vessels growth & development, Cell Culture Techniques instrumentation, Cell Culture Techniques methods, Chromatin metabolism, Epigenesis, Genetic, Epigenomics, Human Umbilical Vein Endothelial Cells, Humans, In Vitro Techniques, Islets of Langerhans blood supply, Models, Biological, Organ Specificity, RNA-Seq, Single-Cell Analysis, Transcription Factors, Transcriptome, Blood Vessels cytology, Carcinogenesis, Endothelial Cells cytology, Hemodynamics, Neoplasms blood supply, Organogenesis, Organoids blood supply
- Abstract
Endothelial cells adopt tissue-specific characteristics to instruct organ development and regeneration
1,2 . This adaptability is lost in cultured adult endothelial cells, which do not vascularize tissues in an organotypic manner. Here, we show that transient reactivation of the embryonic-restricted ETS variant transcription factor 2 (ETV2)3 in mature human endothelial cells cultured in a serum-free three-dimensional matrix composed of a mixture of laminin, entactin and type-IV collagen (LEC matrix) 'resets' these endothelial cells to adaptable, vasculogenic cells, which form perfusable and plastic vascular plexi. Through chromatin remodelling, ETV2 induces tubulogenic pathways, including the activation of RAP1, which promotes the formation of durable lumens4,5 . In three-dimensional matrices-which do not have the constraints of bioprinted scaffolds-the 'reset' vascular endothelial cells (R-VECs) self-assemble into stable, multilayered and branching vascular networks within scalable microfluidic chambers, which are capable of transporting human blood. In vivo, R-VECs implanted subcutaneously in mice self-organize into durable pericyte-coated vessels that functionally anastomose to the host circulation and exhibit long-lasting patterning, with no evidence of malformations or angiomas. R-VECs directly interact with cells within three-dimensional co-cultured organoids, removing the need for the restrictive synthetic semipermeable membranes that are required for organ-on-chip systems, therefore providing a physiological platform for vascularization, which we call 'Organ-On-VascularNet'. R-VECs enable perfusion of glucose-responsive insulin-secreting human pancreatic islets, vascularize decellularized rat intestines and arborize healthy or cancerous human colon organoids. Using single-cell RNA sequencing and epigenetic profiling, we demonstrate that R-VECs establish an adaptive vascular niche that differentially adjusts and conforms to organoids and tumoroids in a tissue-specific manner. Our Organ-On-VascularNet model will permit metabolic, immunological and physiochemical studies and screens to decipher the crosstalk between organotypic endothelial cells and parenchymal cells for identification of determinants of endothelial cell heterogeneity, and could lead to advances in therapeutic organ repair and tumour targeting.- Published
- 2020
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11. Publisher Correction: Histone variant H3.3 maintains adult haematopoietic stem cell homeostasis by enforcing chromatin adaptability.
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Guo P, Liu Y, Geng F, Daman AW, Liu X, Zhong L, Ravishankar A, Lis R, Barcia Durán JG, Itkin T, Tang F, Zhang T, Xiang J, Shido K, Ding BS, Wen D, Josefowicz SZ, and Rafii S
- Published
- 2022
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12. Deep Neural Network for Early Image Diagnosis of Stevens-Johnson Syndrome/Toxic Epidermal Necrolysis.
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Fujimoto A, Iwai Y, Ishikawa T, Shinkuma S, Shido K, Yamasaki K, Fujisawa Y, Fujimoto M, Muramatsu S, and Abe R
- Subjects
- Early Diagnosis, Humans, Neural Networks, Computer, Skin, Stevens-Johnson Syndrome diagnosis
- Abstract
Background: Stevens-Johnson syndrome (SJS)/toxic epidermal necrolysis (TEN) is a life-threatening cutaneous adverse drug reaction (cADR). Distinguishing SJS/TEN from nonsevere cADRs is difficult, especially in the early stages of the disease., Objective: To overcome this limitation, we developed a computer-aided diagnosis system for the early diagnosis of SJS/TEN, powered by a deep convolutional neural network (DCNN)., Methods: We trained a DCNN using a dataset of 26,661 individual lesion images obtained from 123 patients with a diagnosis of SJS/TEN or nonsevere cADRs. The DCNN's accuracy of classification was compared with that of 10 board-certified dermatologists and 24 trainee dermatologists., Results: The DCNN achieved 84.6% sensitivity (95% confidence interval [CI], 80.6-88.6), whereas the sensitivities of the board-certified dermatologists and trainee dermatologists were 31.3 % (95% CI, 20.9-41.8; P < .0001) and 27.8% (95% CI, 22.6-32.5; P < .0001), respectively. The negative predictive value was 94.6% (95% CI, 93.2-96.0) for the DCNN, 68.1% (95% CI, 66.1-70.0; P < .0001) for the board-certified dermatologists, and 67.4% (95% CI, 66.1-68.7; P < .0001) for the trainee dermatologists. The area under the receiver operating characteristic curve of the DCNN for a SJS/TEN diagnosis was 0.873, which was significantly higher than that for all board-certified dermatologists and trainee dermatologists., Conclusions: We developed a DCNN to classify SJS/TEN and nonsevere cADRs based on individual lesion images of erythema. The DCNN performed significantly better than did dermatologists in classifying SJS/TEN from skin images., (Copyright © 2021 American Academy of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.)
- Published
- 2022
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13. Histone variant H3.3 maintains adult haematopoietic stem cell homeostasis by enforcing chromatin adaptability.
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Guo P, Liu Y, Geng F, Daman AW, Liu X, Zhong L, Ravishankar A, Lis R, Barcia Durán JG, Itkin T, Tang F, Zhang T, Xiang J, Shido K, Ding BS, Wen D, Josefowicz SZ, and Rafii S
- Subjects
- Animals, CD8-Positive T-Lymphocytes cytology, Cell Cycle Proteins, Cell Line, Granulocytes cytology, Hematopoiesis physiology, Histone Chaperones, Human Umbilical Vein Endothelial Cells, Humans, Macrophages cytology, Methylation, Mice, Mice, Inbred C57BL, Mice, Knockout, Promoter Regions, Genetic genetics, Protein Processing, Post-Translational physiology, Transcription Factors, Chromatin metabolism, Hematopoietic Stem Cells cytology, Hematopoietic Stem Cells metabolism, Histones metabolism, Myelopoiesis physiology
- Abstract
Histone variants and the associated post-translational modifications that govern the stemness of haematopoietic stem cells (HSCs) and differentiation thereof into progenitors (HSPCs) have not been well defined. H3.3 is a replication-independent H3 histone variant in mammalian systems that is enriched at both H3K4me3- and H3K27me3-marked bivalent genes as well as H3K9me3-marked endogenous retroviral repeats. Here we show that H3.3, but not its chaperone Hira, prevents premature HSC exhaustion and differentiation into granulocyte-macrophage progenitors. H3.3-null HSPCs display reduced expression of stemness and lineage-specific genes with a predominant gain of H3K27me3 marks at their promoter regions. Concomitantly, loss of H3.3 leads to a reduction of H3K9me3 marks at endogenous retroviral repeats, opening up binding sites for the interferon regulatory factor family of transcription factors, allowing the survival of rare, persisting H3.3-null HSCs. We propose a model whereby H3.3 maintains adult HSC stemness by safeguarding the delicate interplay between H3K27me3 and H3K9me3 marks, enforcing chromatin adaptability., (© 2021. The Author(s), under exclusive licence to Springer Nature Limited.)
- Published
- 2022
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14. GWAS Identified IL4R and the Major Histocompatibility Complex Region as the Associated Loci of Total Serum IgE Levels in 9,260 Japanese Individuals.
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Shido K, Kojima K, Shirota M, Yamasaki K, Motoike IN, Hozawa A, Ogishima S, Minegishi N, Tanno K, Katsuoka F, Tamiya G, Aiba S, Yamamoto M, and Kinoshita K
- Subjects
- Genotype, Haplotypes, Humans, Polymorphism, Single Nucleotide, Genetic Loci, Genome-Wide Association Study, Hypersensitivity genetics, Immunoglobulin E blood, Interleukin-4 Receptor alpha Subunit genetics, Major Histocompatibility Complex
- Published
- 2021
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15. Classification of large-scale image database of various skin diseases using deep learning.
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Tanaka M, Saito A, Shido K, Fujisawa Y, Yamasaki K, Fujimoto M, Murao K, Ninomiya Y, Satoh S, and Shimizu A
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- Humans, Photography, Reproducibility of Results, Deep Learning, Skin Diseases diagnostic imaging, Skin Neoplasms
- Abstract
Purpose: The purpose of this study was to develop a deep learning-based computer-aided diagnosis system for skin disease classification using photographic images of patients. The targets are 59 skin diseases, including localized and diffuse diseases captured by photographic cameras, resulting in highly diverse images in terms of the appearance of the diseases or photographic conditions., Methods: ResNet-18 is used as a baseline model for classification and is reinforced by metric learning to boost generalization in classification by avoiding the overfitting of the training data and increasing the reliability of CADx for dermatologists. Patient-wise classification is performed by aggregating the inference vectors of all the input patient images., Results: The experiment using 70,196 images of 13,038 patients demonstrated that classification accuracy was significantly improved by both metric learning and aggregation, resulting in patient accuracies of 0.579 for Top-1, 0.793 for Top-3, and 0.863 for Top-5. The McNemar test showed that the improvements achieved by the proposed method were statistically significant., Conclusion: This study presents a deep learning-based classification of 59 skin diseases using multiple photographic images of a patient. The experimental results demonstrated that the proposed classification reinforced by metric learning and aggregation of multiple input images was effective in the classification of patients with diverse skin diseases and imaging conditions., (© 2021. CARS.)
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- 2021
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16. 297 Deep Ackerman a novel deep learning method to develop dermatopathology diagnosis by artificial intelligence
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Ota, Y., primary, Shido, K., additional, Kojimako, K., additional, Yamasaki, K., additional, Nagasaki, M., additional, and Aiba, S., additional
- Published
- 2018
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17. 299 A genome-wide association study identifies a novel susceptibility locus for total IgE in a Japanese population from Tohoku Medical Megabank cohort study
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Shido, K., primary, Kojima, K., additional, Yamasaki, K., additional, Gervais, O., additional, Yen, W., additional, Nagasaki, M., additional, and Aiba, S., additional
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- 2018
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18. Erratum: Corrigendum: Cytokine-mediated deployment of SDF-1 induces revascularization through recruitment of CXCR4+ hemangiocytes
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Jin, D K, Shido, K, Kopp, H-G, Petit, I, Shmelkov, S V, Young, L M, Hooper, A T, Amano, H, Avecilla, S T, Heissig, B, Hattori, K, Zhang, F, Hicklin, D J, Wu, Y, Zhu, Z, Dunn, A, Salari, H, Werb, Z, Hackett, N R, Crystal, R G, Lyden, D, and Rafii, S
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- 2006
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19. Facial UV photo imaging for skin pigmentation assessment using conditional generative adversarial networks.
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Kojima K, Shido K, Tamiya G, Yamasaki K, Kinoshita K, and Aiba S
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- Adolescent, Adult, Aged, Aged, 80 and over, Cheek diagnostic imaging, Child, Colorimetry methods, Female, Humans, Male, Middle Aged, Skin Neoplasms prevention & control, Ultraviolet Rays, Young Adult, Face diagnostic imaging, Image Interpretation, Computer-Assisted methods, Pigmentation Disorders diagnosis, Skin Pigmentation physiology
- Abstract
Skin pigmentation is associated with skin damages and skin cancers, and ultraviolet (UV) photography is used as a minimally invasive mean for the assessment of pigmentation. Since UV photography equipment is not usually available in general practice, technologies emphasizing pigmentation in color photo images are desired for daily care. We propose a new method using conditional generative adversarial networks, named UV-photo Net, to generate synthetic UV images from color photo images. Evaluations using color and UV photo image pairs taken by a UV photography system demonstrated that pigment spots were well reproduced in synthetic UV images by UV-photo Net, and some of the reproduced pigment spots were difficult to be recognized in color photo images. In the pigment spot detection analysis, the rate of pigment spot areas in cheek regions for synthetic UV images was highly correlated with the rate for UV photo images (Pearson's correlation coefficient 0.92). We also demonstrated that UV-photo Net was effective for floating up pigment spots for photo images taken by a smartphone camera. UV-photo Net enables an easy assessment of pigmentation from color photo images and will promote self-care of skin damages and early signs of skin cancers for preventive medicine.
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- 2021
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20. 503 Genome-wide association study identifies novel susceptibility loci for tanning ability in Japanese population
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Shido, K., primary, Kojima, K., additional, Hozawa, A., additional, Ogishima, S., additional, Minegishi, N., additional, Kawai, Y., additional, Tamiya, G., additional, Tanno, K., additional, Yamasaki, K., additional, Aiba, S., additional, Suzuki, Y., additional, and Nagasaki, M., additional
- Published
- 2017
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21. Subcutaneous granulomatous reaction with eosinophil infiltration to a silicone continuous ambulatory peritoneal dialysis Tenckhoff catheter.
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Hatchome N, Shido K, Kikuchi K, Terui H, Oba-Yabana I, Mori T, Yamasaki K, and Aiba S
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- Eosinophilia etiology, Female, Granuloma etiology, Humans, Hypersensitivity, Delayed etiology, Middle Aged, Patch Tests, Silicones, Subcutaneous Tissue pathology, Catheters adverse effects, Eosinophilia pathology, Granuloma pathology, Hypersensitivity, Delayed pathology, Peritoneal Dialysis, Continuous Ambulatory instrumentation
- Published
- 2020
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22. Single-cell transcriptome unveils unique transcriptomic signatures of human organ-specific endothelial cells.
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Niu RZ, Xu HY, Tian H, Zhang D, He CY, Li XL, Li YY, and He J
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- Humans, Gene Expression Profiling, Organ Specificity, Male, Female, Cellular Senescence genetics, Endothelial Cells metabolism, Transcriptome, Single-Cell Analysis
- Abstract
The heterogeneity of endothelial cells (ECs) across human tissues remains incompletely inventoried. We constructed an atlas of > 210,000 ECs derived from 38 regions across 24 human tissues. Our analysis reveals significant differences in transcriptome, phenotype, metabolism and transcriptional regulation among ECs from various tissues. Notably, arterial, venous, and lymphatic ECs shared more common markers in multiple tissues than capillary ECs, which exhibited higher heterogeneity. This diversity in capillary ECs suggests their greater potential as targets for drug development. ECs from different tissues and vascular beds were found to be associated with specific diseases. Importantly, tissue specificity of EC senescence is more determined by somatic site than by tissue type (e.g. subcutaneus adipose tissue and visceral adipose tissue). Additionally, sex-specific differences in brain EC senescence were observed. Our EC atlas offers valuble resoursce for identifying EC subclusters in single-cell datasets from body tissues or organoids, facilitating the screen of tissue-specific targeted therapies, and serving as a powerful tool for future discoveries., Competing Interests: Declarations. Conflict of interests: The authors declare that they have no conflict of interest., (© 2024. Springer-Verlag GmbH Germany, part of Springer Nature.)
- Published
- 2024
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23. Blood flow-induced angiocrine signals promote organ growth and regeneration.
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Follert P, Große-Segerath L, and Lammert E
- Abstract
Recently, we identified myeloid-derived growth factor (MYDGF) as a blood flow-induced angiocrine signal that promotes human and mouse hepatocyte proliferation and survival. Here, we review literature reporting changes in blood flow after partial organ resection in the liver, lung, and kidney, and we describe the angiocrine signals released by endothelial cells (ECs) upon blood flow alterations in these organs. While hepatocyte growth factor (HGF) and MYDGF are important angiocrine signals for liver regeneration, by now, angiocrine signals have also been reported to stimulate hyperplasia and/or hypertrophy during the regeneration of lungs and kidneys. In addition, angiocrine signals play a critical role in tumor growth. Understanding the mechano-elastic properties and flow-mediated alterations in the organ-specific microvasculature is crucial for therapeutic approaches to maintain organ health and initiate organ renewal., (© 2024 The Author(s). BioEssays published by Wiley Periodicals LLC.)
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- 2024
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24. S100P regulates the collective invasion of pancreatic cancer cells into the lymphatic endothelial monolayer.
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Nakayama H, Ohuchida K, Yonenaga A, Sagara A, Ando Y, Kibe S, Takesue S, Abe T, Endo S, Koikawa K, Okumura T, Shido K, Miyoshi K, Nakata K, Moriyama T, Miyasaka Y, Inoue S, Ohtsuka T, Mizumoto K, and Nakamura M
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- Adult, Aged, Aged, 80 and over, Animals, Cell Adhesion physiology, Cell Line, Tumor, Endothelial Cells metabolism, Female, Humans, Immunohistochemistry, Lymph Nodes metabolism, Lymph Nodes pathology, Lymphatic Metastasis, Male, Mice, Middle Aged, Neoplasm Invasiveness, Pancreatic Neoplasms metabolism, Spheroids, Cellular, Antigens, Nuclear metabolism, Autoantigens metabolism, Endothelial Cells pathology, Pancreatic Neoplasms pathology
- Abstract
Lymph node metastasis is an independent prognostic factor in pancreatic cancer. However, the mechanisms of lymph node colonization are unknown. As a mechanism of lymphatic metastasis, it has been reported for other types of cancer that spheroids from tumor cells cause circular chemorepellent‑induced defects (CCIDs) in lymphatic endothelial monolayers. In pancreatic cancer, such mechanisms of metastasis have not been elucidated. The present study evaluated the involvement of this new mechanism of metastasis in pancreatic cancer and investigated the associated factors. In human pancreatic cancer tissue, it was observed that clusters of cancer cells penetrated the wall of lymphatic ducts around the primary tumor. An in vitro co‑culture system was then used to analyze the mechanisms of tumor cell‑mediated disruption of lymphatic vessels. Time‑lapse microscopic imaging revealed that spheroids from pancreatic cancer cells caused circular defects in lymphatic endothelial monolayers. CCID formation ability differed depending on the cell line. Neither aggregation of spheroids nor adhesion to lymphatic endothelial cells (LECs) exhibited a significant correlation with this phenomenon. The addition of supernatant from cultured cancer cells enhanced CCID formation. Microarray analysis revealed that the expression of S100 calcium binding protein P (S100P) was significantly increased when LECs were treated with supernatant from cultured cancer cells. Addition of a S100P antagonist significantly suppressed the migration of LECs and CCID formation. The present findings demonstrated that spheroids from pancreatic cancer cells caused circular defects in lymphatic endothelial monolayers. These CCIDs in pancreatic cancer were partly regulated by S100P, suggesting that S100P may be a promising target to inhibit lymph node metastasis.
- Published
- 2019
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25. Susceptibility Loci for Tanning Ability in the Japanese Population Identified by a Genome-Wide Association Study from the Tohoku Medical Megabank Project Cohort Study.
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Shido K, Kojima K, Yamasaki K, Hozawa A, Tamiya G, Ogishima S, Minegishi N, Kawai Y, Tanno K, Suzuki Y, Nagasaki M, and Aiba S
- Subjects
- Aged, Cohort Studies, Female, Genetic Predisposition to Disease, Genome-Wide Association Study, Humans, Japan, Male, Middle Aged, Polymorphism, Single Nucleotide, Prospective Studies, Skin, Skin Physiological Phenomena, Sunbathing, Sunlight, Asian People, Genetic Loci genetics, Skin Pigmentation genetics
- Published
- 2019
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26. Edible oil methods to remove asphalt on burns.
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Yamazaki E, Shido K, Yamasaki K, and Aiba S
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- Accidents, Anti-Infective Agents, Local therapeutic use, Burns etiology, Burns pathology, Humans, Skin pathology, Solvents therapeutic use, Treatment Outcome, Burns therapy, Hot Temperature adverse effects, Hydrocarbons, Mineral Oil therapeutic use, Plant Oils therapeutic use
- Abstract
Asphalt, also known as bitumen, is a viscous liquid or a semi-solid form of petroleum. In cases of hot liquid asphalt splash, asphalt broadly adheres to the skin surface and is hard to remove from skin. Because accidental burns from hot liquid asphalt splash rarely occur, there is no consensus about initial approaches to remove adherent asphalt from skin. We reviewed articles relating to asphalt burns and summarized methods to remove adherent asphalt from skin, including our present case in which we successfully removed adherent asphalt by edible butter and vegetable oil. We summarized information of 127 cases and classified agents used to remove asphalt in four categories: (i) medicines; (ii) health-care products; (iii) foods; and (iv) solvents. Before the 1990s, antimicrobial topical medicines were mainly reported to treat asphalt burns but it took half a day or more to remove asphalt. Mineral oils and edible oils such as butter and vegetable oil are easily available in grocery stores and could emulsify to remove asphalt in a few hours. From the review of articles and our experience, edible oils are useful agents for the first approach to remove asphalt from the point of view of efficacy, safety, availability and expense., (© 2018 Japanese Dermatological Association.)
- Published
- 2018
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27. Histone variant H3.3-mediated chromatin remodeling is essential for paternal genome activation in mouse preimplantation embryos.
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Kong Q, Banaszynski LA, Geng F, Zhang X, Zhang J, Zhang H, O'Neill CL, Yan P, Liu Z, Shido K, Palermo GD, Allis CD, Rafii S, Rosenwaks Z, and Wen D
- Subjects
- Animals, Blastocyst cytology, Blastomeres cytology, Blastomeres metabolism, Embryonic Development, Female, Gene Expression Regulation, Developmental, Green Fluorescent Proteins genetics, Green Fluorescent Proteins metabolism, Histones antagonists & inhibitors, Histones genetics, Male, Mice, Mice, Inbred ICR, Mice, Transgenic, Morula cytology, Morula metabolism, Octamer Transcription Factor-3 chemistry, Octamer Transcription Factor-3 genetics, Octamer Transcription Factor-3 metabolism, Protein Isoforms antagonists & inhibitors, Protein Isoforms genetics, Protein Isoforms metabolism, RNA Interference, Recombinant Fusion Proteins chemistry, Recombinant Fusion Proteins metabolism, Blastocyst metabolism, Chromatin Assembly and Disassembly, Histones metabolism, Paternal Inheritance, Transcriptional Activation
- Abstract
Derepression of chromatin-mediated transcriptional repression of paternal and maternal genomes is considered the first major step that initiates zygotic gene expression after fertilization. The histone variant H3.3 is present in both male and female gametes and is thought to be important for remodeling the paternal and maternal genomes for activation during both fertilization and embryogenesis. However, the underlying mechanisms remain poorly understood. Using our H3.3B-HA-tagged mouse model, engineered to report H3.3 expression in live animals and to distinguish different sources of H3.3 protein in embryos, we show here that sperm-derived H3.3 (sH3.3) protein is removed from the sperm genome shortly after fertilization and extruded from the zygotes via the second polar bodies (PBII) during embryogenesis. We also found that the maternal H3.3 (mH3.3) protein is incorporated into the paternal genome as early as 2 h postfertilization and is detectable in the paternal genome until the morula stage. Knockdown of maternal H3.3 resulted in compromised embryonic development both of fertilized embryos and of androgenetic haploid embryos. Furthermore, we report that mH3.3 depletion in oocytes impairs both activation of the Oct4 pluripotency marker gene and global de novo transcription from the paternal genome important for early embryonic development. Our results suggest that H3.3-mediated paternal chromatin remodeling is essential for the development of preimplantation embryos and the activation of the paternal genome during embryogenesis., (© 2018 by The American Society for Biochemistry and Molecular Biology, Inc.)
- Published
- 2018
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28. ChemInform Abstract: A Highly Convenient, One-Pot Synthesis of 3-Bromo-1,5- and -1,7- azulenequinones by Polybromination of Azulene.
- Author
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NOZOE, T., primary, WAKABAYASHI, H., additional, SHIDO, K., additional, KURIHARA, T., additional, ISHIKAWA, S., additional, and KAGEYAMA, M., additional
- Published
- 2010
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29. Corrigendum: Cytokine-mediated deployment of SDF-1 induces revascularization through recruitment of CXCR4+ hemangiocytes
- Author
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Jin, D K, Shido, K, Kopp, H-G, Petit, I, Shmelkov, S V, Young, L M, Hooper, A T, Amano, H, Avecilla, S T, Heissig, B, Hattori, K, Zhang, F, Hicklin, D J, Wu, Y, Zhu, Z, Dunn, A, Salari, H, Werb, Z, Hackett, N R, Crystal, R G, Lyden, D, and Rafii, S
- Abstract
Author(s): D K Jin; K Shido; H-G Kopp; I Petit; S V Shmelkov; L M Young; A T Hooper; H Amano; S T Avecilla; B Heissig; K Hattori; F Zhang; [...]
- Published
- 2006
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30. The thrombopoietin mimetic JNJ-26366821 reduces the late injury and accelerates the onset of liver recovery after acetaminophen-induced liver injury in mice.
- Author
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Adelusi OB, Akakpo JY, Eichenbaum G, Sadaff E, Ramachandran A, and Jaeschke H
- Subjects
- Animals, Male, Mice, Acetylcysteine pharmacology, Cell Proliferation drug effects, Hepatocytes drug effects, Mice, Inbred C57BL, Oxidative Stress drug effects, Pyrazoles pharmacology, Receptors, Thrombopoietin metabolism, Acetaminophen toxicity, Chemical and Drug Induced Liver Injury prevention & control, Chemical and Drug Induced Liver Injury drug therapy, Liver drug effects, Liver metabolism, Liver pathology, Liver Regeneration drug effects, Thrombopoietin pharmacology
- Abstract
Acetaminophen (APAP)-induced hepatotoxicity is comprised of an injury and recovery phase. While pharmacological interventions, such as N-acetylcysteine (NAC) and 4-methylpyrazole (4-MP), prevent injury there are no therapeutics that promote recovery. JNJ-26366821 (TPOm) is a novel thrombopoietin mimetic peptide with no sequence homology to endogenous thrombopoietin (TPO). Endogenous thrombopoietin is produced by hepatocytes and the TPO receptor is present on liver sinusoidal endothelial cells in addition to megakaryocytes and platelets, and we hypothesize that TPOm activity at the TPO receptor in the liver provides a beneficial effect following liver injury. Therefore, we evaluated the extent to which TPOm, NAC or 4-MP can provide a protective and regenerative effect in the liver when administered 2 h after an APAP overdose of 300 mg/kg in fasted male C57BL/6J mice. TPOm did not affect protein adducts, oxidant stress, DNA fragmentation and hepatic necrosis up to 12 h after APAP. In contrast, TPOm treatment was beneficial at 24 h, i.e., all injury parameters were reduced by 42-48%. Importantly, TPOm enhanced proliferation by 100% as indicated by PCNA-positive hepatocytes around the area of necrosis. When TPOm treatment was delayed by 6 h, there was no effect on the injury, but a proliferative effect was still evident. In contrast, 4MP and NAC treated at 2 h after APAP significantly attenuated all injury parameters at 24 h but failed to enhance hepatocyte proliferation. Thus, TPOm arrests the progression of liver injury by 24 h after APAP and accelerates the onset of the proliferative response which is essential for liver recovery., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
- Published
- 2024
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31. Endothelial jagged-2 sustains hematopoietic stem and progenitor reconstitution after myelosuppression.
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Guo P, Poulos MG, Palikuqi B, Badwe CR, Lis R, Kunar B, Ding BS, Rabbany SY, Shido K, Butler JM, and Rafii S
- Subjects
- Allografts, Animals, Cell Cycle Proteins genetics, Cell Cycle Proteins metabolism, Gene Deletion, Jagged-2 Protein genetics, Mice, Mice, Transgenic, Receptor, Notch2 genetics, Receptor, Notch2 metabolism, Transcription Factor HES-1 genetics, Transcription Factor HES-1 metabolism, Adult Stem Cells metabolism, Graft Survival, Hematopoietic Stem Cell Transplantation, Hematopoietic Stem Cells metabolism, Jagged-2 Protein biosynthesis, Signal Transduction
- Abstract
Angiocrine factors, such as Notch ligands, supplied by the specialized endothelial cells (ECs) within the bone marrow and splenic vascular niche play an essential role in modulating the physiology of adult hematopoietic stem and progenitor cells (HSPCs). However, the relative contribution of various Notch ligands, specifically jagged-2, to the homeostasis of HSPCs is unknown. Here, we show that under steady state, jagged-2 is differentially expressed in tissue-specific vascular beds, but its expression is induced in hematopoietic vascular niches after myelosuppressive injury. We used mice with EC-specific deletion of the gene encoding jagged-2 (Jag2) to demonstrate that while EC-derived jagged-2 was dispensable for maintaining the capacity of HSPCs to repopulate under steady-state conditions, by activating Notch2 it did contribute to the recovery of HSPCs in response to myelosuppressive conditions. Engraftment and/or expansion of HSPCs was dependent on the expression of endothelial-derived jagged-2 following myeloablation. Additionally, jagged-2 expressed in bone marrow ECs regulated HSPC cell cycle and quiescence during regeneration. Endothelial-deployed jagged-2 triggered Notch2/Hey1, while tempering Notch2/Hes1 signaling in HSPCs. Collectively, these data demonstrate that EC-derived jagged-2 activates Notch2 signaling in HSPCs to promote hematopoietic recovery and has potential as a therapeutic target to accelerate balanced hematopoietic reconstitution after myelosuppression.
- Published
- 2017
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32. Targeting the vascular and perivascular niches as a regenerative therapy for lung and liver fibrosis.
- Author
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Cao Z, Ye T, Sun Y, Ji G, Shido K, Chen Y, Luo L, Na F, Li X, Huang Z, Ko JL, Mittal V, Qiao L, Chen C, Martinez FJ, Rafii S, and Ding BS
- Subjects
- Endothelial Cells drug effects, Endothelial Cells metabolism, Epithelial Cells transplantation, Fibroblasts drug effects, Fibroblasts metabolism, Fibroblasts pathology, Hepatocyte Growth Factor pharmacology, Hepatocytes drug effects, Hepatocytes metabolism, Humans, Liver Cirrhosis pathology, Liver Regeneration drug effects, NADPH Oxidase 4 antagonists & inhibitors, NADPH Oxidase 4 metabolism, Parenchymal Tissue transplantation, Pulmonary Alveoli pathology, Pulmonary Fibrosis pathology, Liver Cirrhosis therapy, Neovascularization, Physiologic drug effects, Pulmonary Fibrosis therapy, Regenerative Medicine
- Abstract
The regenerative capacity of lung and liver is sometimes impaired by chronic or overwhelming injury. Orthotopic transplantation of parenchymal stem cells to damaged organs might reinstate their self-repair ability. However, parenchymal cell engraftment is frequently hampered by the microenvironment in diseased recipient organs. We show that targeting both the vascular niche and perivascular fibroblasts establishes "hospitable soil" to foster the incorporation of "seed," in this case, the engraftment of parenchymal cells in injured organs. Specifically, ectopic induction of endothelial cell (EC)-expressed paracrine/angiocrine hepatocyte growth factor (HGF) and inhibition of perivascular NOX4 [NADPH (reduced form of nicotinamide adenine dinucleotide phosphate) oxidase 4] synergistically enabled reconstitution of mouse and human parenchymal cells in damaged organs. Reciprocally, genetic knockout of Hgf in mouse ECs ( Hgf
iΔEC/iΔEC ) aberrantly up-regulated perivascular NOX4 during liver and lung regeneration. Dysregulated HGF and NOX4 pathways subverted the function of vascular and perivascular cells from an epithelially inductive niche to a microenvironment that inhibited parenchymal reconstitution. Perivascular NOX4 induction in HgfiΔEC/iΔEC mice recapitulated the phenotype of human and mouse liver and lung fibrosis. Consequently, EC-directed HGF and NOX4 inhibitor GKT137831 stimulated regenerative integration of mouse and human parenchymal cells in chronically injured lung and liver. Our data suggest that targeting dysfunctional perivascular and vascular cells in diseased organs can bypass fibrosis and enable reparative cell engraftment to reinstate lung and liver regeneration., (Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)- Published
- 2017
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33. Conversion of adult endothelium to immunocompetent haematopoietic stem cells.
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Lis R, Karrasch CC, Poulos MG, Kunar B, Redmond D, Duran JGB, Badwe CR, Schachterle W, Ginsberg M, Xiang J, Tabrizi AR, Shido K, Rosenwaks Z, Elemento O, Speck NA, Butler JM, Scandura JM, and Rafii S
- Subjects
- Adaptive Immunity, Aging genetics, Animals, Cell Line, Cell Lineage, Cell Self Renewal, Clone Cells cytology, Clone Cells transplantation, Core Binding Factor Alpha 2 Subunit genetics, Core Binding Factor Alpha 2 Subunit metabolism, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Endothelial Cells cytology, Endothelial Cells metabolism, Hematopoiesis, Hematopoietic Stem Cell Transplantation, Hematopoietic Stem Cells metabolism, Humans, Male, Mice, Mice, Inbred C57BL, Proto-Oncogene Proteins genetics, Proto-Oncogene Proteins metabolism, Proto-Oncogene Proteins c-fos genetics, Proto-Oncogene Proteins c-fos metabolism, Trans-Activators genetics, Trans-Activators metabolism, Transcription Factors genetics, Transcription Factors metabolism, Transcriptome, Cell Differentiation, Cellular Reprogramming, Endothelium cytology, Hematopoietic Stem Cells cytology, Hematopoietic Stem Cells immunology, T-Lymphocytes cytology, T-Lymphocytes immunology
- Abstract
Developmental pathways that orchestrate the fleeting transition of endothelial cells into haematopoietic stem cells remain undefined. Here we demonstrate a tractable approach for fully reprogramming adult mouse endothelial cells to haematopoietic stem cells (rEC-HSCs) through transient expression of the transcription-factor-encoding genes Fosb, Gfi1, Runx1, and Spi1 (collectively denoted hereafter as FGRS) and vascular-niche-derived angiocrine factors. The induction phase (days 0-8) of conversion is initiated by expression of FGRS in mature endothelial cells, which results in endogenous Runx1 expression. During the specification phase (days 8-20), RUNX1
+ FGRS-transduced endothelial cells commit to a haematopoietic fate, yielding rEC-HSCs that no longer require FGRS expression. The vascular niche drives a robust self-renewal and expansion phase of rEC-HSCs (days 20-28). rEC-HSCs have a transcriptome and long-term self-renewal capacity similar to those of adult haematopoietic stem cells, and can be used for clonal engraftment and serial primary and secondary multi-lineage reconstitution, including antigen-dependent adaptive immune function. Inhibition of TGFβ and CXCR7 or activation of BMP and CXCR4 signalling enhanced generation of rEC-HSCs. Pluripotency-independent conversion of endothelial cells into autologous authentic engraftable haematopoietic stem cells could aid treatment of haematological disorders.- Published
- 2017
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34. Molecular Checkpoint Decisions Made by Subverted Vascular Niche Transform Indolent Tumor Cells into Chemoresistant Cancer Stem Cells.
- Author
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Cao Z, Scandura JM, Inghirami GG, Shido K, Ding BS, and Rafii S
- Subjects
- Animals, Cell Transformation, Neoplastic, Drug Resistance, Neoplasm, Endothelial Cells physiology, Fibroblast Growth Factor 4 physiology, Humans, Insulin-Like Growth Factor I physiology, Mice, Proto-Oncogene Protein c-ets-2 physiology, Receptor, IGF Type 1 physiology, Insulin-Like Growth Factor Binding Proteins physiology, Neoplastic Stem Cells drug effects
- Abstract
Tumor-associated endothelial cells (TECs) regulate tumor cell aggressiveness. However, the core mechanism by which TECs confer stem cell-like activity to indolent tumors is unknown. Here, we used in vivo murine and human tumor models to identify the tumor-suppressive checkpoint role of TEC-expressed insulin growth factor (IGF) binding protein-7 (IGFBP7/angiomodulin). During tumorigenesis, IGFBP7 blocks IGF1 and inhibits expansion and aggresiveness of tumor stem-like cells (TSCs) expressing IGF1 receptor (IGF1R). However, chemotherapy triggers TECs to suppress IGFBP7, and this stimulates IGF1R
+ TSCs to express FGF4, inducing a feedforward FGFR1-ETS2 angiocrine cascade that obviates TEC IGFBP7. Thus, loss of IGFBP7 and upregulation of IGF1 activates the FGF4-FGFR1-ETS2 pathway in TECs and converts naive tumor cells to chemoresistant TSCs, thereby facilitating their invasiveness and progression., (Copyright © 2017 Elsevier Inc. All rights reserved.)- Published
- 2017
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35. Platelets prime hematopoietic and vascular niche to drive angiocrine-mediated liver regeneration.
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Shido K, Chavez D, Cao Z, Ko J, Rafii S, and Ding BS
- Abstract
In mammals, the livers regenerate after chemical injury or resection of hepatic lobe by hepatectomy. How liver regeneration is initiated after mass loss remains to be defined. Here, we report that following liver injury, activated platelets deploy SDF-1 and VEGF-A to stimulate CXCR7
+ liver sinusoidal endothelial cell (LSEC) and VEGFR1+ myeloid cell, orchestrating hepatic regeneration. After carbon tetrachloride (CCl4 ) injection or hepatectomy, platelets and CD11b+ VEGFR1+ myeloid cells were recruited LSEC, and liver regeneration in both models was impaired in thrombopoietin-deficient ( Thpo-/- ) mice lacking circulating platelets. This impeded regeneration phenotype was recapitulated in mice with either conditional ablation of Cxcr7 in LSEC ( Cxcr7iΔ/iΔ ) or Vegfr1 in myeloid cell ( Vegfr1lysM/lysM ). Both Vegfr1lysM/lysM and Cxcr7iΔ/iΔ mice exhibited suppressed expression of hepatocyte growth factor and Wnt2, two crucial trophogenic angiocrine factors instigating hepatocyte propagation. Of note, administration of recombinant thrombopoietin restored the prohibited liver regeneration in the tested genetic models. As such, our data suggest that platelets and myeloid cells jointly activate the vascular niche to produce pro-regenerative endothelial paracrine/angiocrine factors. Modulating this "hematopoietic-vascular niche" might help to develop regenerative therapy strategy for hepatic disorders.- Published
- 2017
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36. Angiotensin converting enzyme as a genetic risk factor for coronary artery spasm. Implication in the pathogenesis of myocardial infarction.
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Oike, Y, primary, Hata, A, additional, Ogata, Y, additional, Numata, Y, additional, Shido, K, additional, and Kondo, K, additional
- Published
- 1995
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37. Plexiform Fibrohistiocytic Tumor on the Ear: Case Report and Immunohistochemical Investigation of Stromal Factor.
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Shido K, Fujimura T, Kakizaki A, Furudate S, Asano M, and Aiba S
- Abstract
Plexiform fibrohistiocytic tumor (PFT) is a rare mesenchymal neoplasm of intermediate malignant potential with a high local recurrence rate. In this report, we describe a case of PFT on the ear, which showed a dense deposition of periostin (POSTN) in the stromal areas of the tumor. In addition, dense infiltration of CD163+CD206- tumor-associated macrophages (TAMs) was detected in the same areas as POSTN. Since POSTN was previously reported to possess immunomodulatory effects on TAMs, our present report suggested the significance of the POSTN/TAMs axis in the progression of PFT.
- Published
- 2016
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38. Targeting of the pulmonary capillary vascular niche promotes lung alveolar repair and ameliorates fibrosis.
- Author
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Cao Z, Lis R, Ginsberg M, Chavez D, Shido K, Rabbany SY, Fong GH, Sakmar TP, Rafii S, and Ding BS
- Subjects
- Animals, Antibiotics, Antineoplastic toxicity, Bleomycin toxicity, Calcium-Binding Proteins antagonists & inhibitors, Capillaries drug effects, Endothelial Cells drug effects, Endothelial Cells physiology, Fibroblasts drug effects, Fibrosis, Fluorescent Antibody Technique, Humans, Hydrochloric Acid toxicity, Jagged-1 Protein, Lung drug effects, Lung pathology, Lung physiology, Macrophages drug effects, Macrophages metabolism, Membrane Proteins antagonists & inhibitors, Mice, Oligopeptides pharmacology, Pulmonary Artery drug effects, Pulmonary Artery metabolism, Pulmonary Circulation drug effects, Pulmonary Circulation physiology, RNA, Small Interfering pharmacology, Receptors, CXCR agonists, Receptors, Notch metabolism, Regeneration drug effects, Serrate-Jagged Proteins, Smad3 Protein drug effects, Smad3 Protein metabolism, Vascular Endothelial Growth Factor Receptor-1 metabolism, Wnt Signaling Pathway, Calcium-Binding Proteins metabolism, Capillaries metabolism, Endothelial Cells metabolism, Fibroblasts metabolism, Intercellular Signaling Peptides and Proteins metabolism, Lung metabolism, Lung Injury metabolism, Membrane Proteins metabolism, Pulmonary Fibrosis metabolism, Receptors, CXCR metabolism, Regeneration physiology
- Abstract
Although the lung can undergo self-repair after injury, fibrosis in chronically injured or diseased lungs can occur at the expense of regeneration. Here we study how a hematopoietic-vascular niche regulates alveolar repair and lung fibrosis. Using intratracheal injection of bleomycin or hydrochloric acid in mice, we show that repetitive lung injury activates pulmonary capillary endothelial cells (PCECs) and perivascular macrophages, impeding alveolar repair and promoting fibrosis. Whereas the chemokine receptor CXCR7, expressed on PCECs, acts to prevent epithelial damage and ameliorate fibrosis after a single round of treatment with bleomycin or hydrochloric acid, repeated injury leads to suppression of CXCR7 expression and recruitment of vascular endothelial growth factor receptor 1 (VEGFR1)-expressing perivascular macrophages. This recruitment stimulates Wnt/β-catenin-dependent persistent upregulation of the Notch ligand Jagged1 (encoded by Jag1) in PCECs, which in turn stimulates exuberant Notch signaling in perivascular fibroblasts and enhances fibrosis. Administration of a CXCR7 agonist or PCEC-targeted Jag1 shRNA after lung injury promotes alveolar repair and reduces fibrosis. Thus, targeting of a maladapted hematopoietic-vascular niche, in which macrophages, PCECs and perivascular fibroblasts interact, may help to develop therapy to spur lung regeneration and alleviate fibrosis.
- Published
- 2016
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39. Somatic BRAF c.1799T>A p.V600E Mosaicism syndrome characterized by a linear syringocystadenoma papilliferum, anaplastic astrocytoma, and ocular abnormalities.
- Author
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Watanabe Y, Shido K, Niihori T, Niizuma H, Katata Y, Iizuka C, Oba D, Moriya K, Saito-Nanjo Y, Onuma M, Rikiishi T, Sasahara Y, Watanabe M, Aiba S, Saito R, Sonoda Y, Tominaga T, Aoki Y, and Kure S
- Subjects
- Adenoma, Sweat Gland drug therapy, Astrocytoma drug therapy, Brain Neoplasms drug therapy, Eye pathology, Eye Abnormalities genetics, Humans, Indoles therapeutic use, Infant, Mosaicism, Nevus, Sebaceous of Jadassohn genetics, Premature Birth, Proto-Oncogene Proteins B-raf antagonists & inhibitors, Sulfonamides therapeutic use, Sweat Gland Neoplasms drug therapy, Vemurafenib, Adenoma, Sweat Gland genetics, Astrocytoma genetics, Brain Neoplasms genetics, Proto-Oncogene Proteins B-raf genetics, Sweat Gland Neoplasms genetics
- Abstract
Genetic mosaicism for somatic mutations of oncogenes is common in genodermatoses, which can be complicated with extra-cutaneous abnormalities. Here we describe an infant with a congenital anaplastic astrocytoma, a linear syringocystadenoma papilliferum, and ocular abnormalities. The BRAF c.1799T>A p.V600E mutation was detected in both the brain and skin tumor cells but not in the blood or normal skin cells, suggesting somatic mosaicsism for the mutation. Clinically, the brain tumor gradually became life threatening without any response to conventional chemotherapies including carboplatin, etoposide, and temozolomide. Vemurafenib, a BRAF p.V600E inhibitor, was administered daily after the detection of the BRAF mutation. This single-agent therapy was dramatically effective against the anaplastic astrocytoma; the tumor regressed, the cerebrospinal fluid cell count and protein levels decreased to normal levels, and hydrocephalus resolved. Moreover, other lesions including a corneal cyst also responded to vemurafenib. The brain tumor continued shrinking after 6 months of treatment. We present a genodermatosis syndrome associated with BRAF c.1799T>A p.V600E mosaicism. This syndrome may represent a new entity in the mosaic RASopathies, partly overlapping with Schimmelpenning-Feuerstein-Mims syndrome, which is driven by mosaicism of HRAS and/or KRAS activating mutations. Screening for BRAF c.1799T>A p.V600E is especially useful for those with malignant tumors, because it is one of the most-druggable targets., (© 2015 Wiley Periodicals, Inc.)
- Published
- 2016
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40. Direct conversion of human amniotic cells into endothelial cells without transitioning through a pluripotent state.
- Author
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Ginsberg M, Schachterle W, Shido K, and Rafii S
- Subjects
- Animals, Cell Culture Techniques methods, Cells, Cultured, Embryonic Stem Cells metabolism, Endothelial Cells metabolism, Endothelial Cells transplantation, Gene Expression Regulation, Developmental, Humans, Mice, SCID, Proto-Oncogene Protein c-fli-1 genetics, Transcription Factors genetics, Transforming Growth Factor beta antagonists & inhibitors, Amniotic Fluid cytology, Cell Transdifferentiation, Embryonic Stem Cells cytology, Endothelial Cells cytology
- Abstract
Endothelial cells (ECs) have essential roles in organ development and regeneration, and therefore they could be used for regenerative therapies. However, generation of abundant functional endothelium from pluripotent stem cells has been difficult because ECs generated by many existing strategies have limited proliferative potential and display vascular instability. The latter difficulty is of particular importance because cells that lose their identity over time could be unsuitable for therapeutic use. Here, we describe a 3-week platform for directly converting human mid-gestation lineage-committed amniotic fluid-derived cells (ACs) into a stable and expandable population of vascular ECs (rAC-VECs) without using pluripotency factors. By transient expression of the ETS transcription factor ETV2 for 2 weeks and constitutive expression the ETS transcription factors FLI1 and ERG1, concomitant with TGF-β inhibition for 3 weeks, epithelial and mesenchymal ACs are converted, with high efficiency, into functional rAC-VECs. These rAC-VECs maintain their vascular repertoire and morphology over numerous passages in vitro, and they form functional vessels when implanted in vivo. rAC-VECs can be detected in recipient mice months after implantation. Thus, rAC-VECs can be used to establish a cellular platform to uncover the molecular determinants of vascular development and heterogeneity and potentially represent ideal ECs for the treatment of regenerative disorders.
- Published
- 2015
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- View/download PDF
41. Platelet-derived SDF-1 primes the pulmonary capillary vascular niche to drive lung alveolar regeneration.
- Author
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Rafii S, Cao Z, Lis R, Siempos II, Chavez D, Shido K, Rabbany SY, and Ding BS
- Subjects
- Animals, Antigens, CD metabolism, Cadherins metabolism, Endothelial Cells enzymology, Epidermal Growth Factor metabolism, Gene Deletion, Ligands, Matrix Metalloproteinase 14 metabolism, Mice, Organ Specificity, Platelet Membrane Glycoprotein IIb metabolism, Pneumonectomy, Receptor, Fibroblast Growth Factor, Type 1 metabolism, Receptors, CXCR metabolism, Receptors, CXCR4, Signal Transduction, Thrombopoietin deficiency, Thrombopoietin metabolism, Vascular Endothelial Growth Factor Receptor-2 metabolism, Blood Platelets metabolism, Capillaries metabolism, Chemokine CXCL12 metabolism, Pulmonary Alveoli blood supply, Pulmonary Alveoli physiology, Regeneration
- Abstract
The lung alveoli regenerate after surgical removal of the left lobe by pneumonectomy (PNX). How this alveolar regrowth/regeneration is initiated remains unknown. We found that platelets trigger lung regeneration by supplying stromal-cell-derived factor-1 (SDF-1, also known as CXCL12). After PNX, activated platelets stimulate SDF-1 receptors CXCR4 and CXCR7 on pulmonary capillary endothelial cells (PCECs) to deploy the angiocrine membrane-type metalloproteinase MMP14, stimulating alveolar epithelial cell (AEC) expansion and neo-alveolarization. In mice lacking platelets or platelet Sdf1, PNX-induced alveologenesis was diminished. Reciprocally, infusion of Sdf1(+/+) but not Sdf1-deficient platelets rescued lung regeneration in platelet-depleted mice. Endothelial-specific ablation of Cxcr4 and Cxcr7 in adult mice similarly impeded lung regeneration. Notably, mice with endothelial-specific Mmp14 deletion exhibited impaired expansion of AECs but not PCECs after PNX, which was not rescued by platelet infusion. Therefore, platelets prime PCECs to initiate lung regeneration, extending beyond their haemostatic contribution. Therapeutic targeting of this haemo-vascular niche could enable regenerative therapy for lung diseases.
- Published
- 2015
- Full Text
- View/download PDF
42. Age and gender differences in skin characteristics: a study of 2543 Japanese individuals using advanced skin imaging techniques.
- Author
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Osuji, Yurika, Omatsu, Jun, Sato, Shinichi, and Yoshizaki, Ayumi
- Abstract
Skin aging is a multifaceted process influenced by genetic, environmental, and immunological factors, resulting in visible changes such as wrinkles, pigmentation, and alterations in skin texture. Despite its high relevance, there is a paucity of large-scale studies focusing on visible age-related changes in facial skin among Japanese populations, particularly by region. This study aims to address these gaps by examining age- and sex-specific skin changes in a large cohort of 2,543 Japanese subjects using advanced skin imaging techniques. The study included subjects aged 17–71 years who provided informed consent. The imaging system captures facial images using standard light, UV light, and two types of polarized light, applying deep learning techniques to analyze various skin parameters. Statistical analysis was performed to evaluate correlations between age, gender, and skin characteristics. Results indicated significant correlations between age and skin color across all domains, with large pores on the nose showing the highest correlation with age. Sebum and porphyrin levels exhibited a decreasing trend with age, though correlation coefficients were low. Cheek gloss, both in area and color, showed relatively high correlation coefficients. Pigmentation-related items, such as spots and melanin, demonstrated significant age correlations, particularly in areas like the corners of the eyes, under the eyes, and cheeks. Wrinkles and fine wrinkles correlated with age in various regions, though not on the forehead. The findings highlight the importance of understanding regional and demographic variations in skin aging to develop effective anti-aging treatments. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
43. Cellular crosstalk in the bone marrow niche.
- Author
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Huang, Zeqi, Iqbal, Zoya, Zhao, Zhe, Liu, Jianquan, Alabsi, A. M., Shabbir, Maryam, Mahmood, Ayesha, Liang, Yujie, Li, Wencui, and Deng, Zhiqin
- Abstract
The bone marrow niche is a special microenvironment that comprises elements, including hematopoietic stem cells, osteoblasts, and endothelial cells, and helps maintain their characteristic functions. Here, we elaborate on the crosstalk between various cellular components, hematopoietic stem cells, and other cells in the bone marrow niche. We further explain the mechanism of preserving equilibrium in the bone marrow niche, which is crucial for the directional regulation of bone reconstruction and repair. Additionally, we elucidate the intercommunication among osteocytes, the regulation of osteoblast maturation and activation by lymphocytes, the deficiency of megakaryocytes that can markedly impair osteoblast formation, and the mechanism of interaction between macrophages and mesenchymal stem cells in the bone marrow niche. Finally, we discussed the new immunotherapies for bone tumors in the BM niche. In this review, we aimed to provide a candid overview of the crosstalk among bone marrow niche cells and to highlight new concepts underlying the unknown mechanisms of hematopoiesis and bone reconstruction. Thus, this review may provide a more comprehensive understanding of the role of these niche cells in improving hematopoietic function and help identify their therapeutic potential for different diseases in the future. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
44. Decoding lung complexity: single-cell sequencing in lung diseases, regeneration, and drug discovery.
- Author
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Wang, Peng and Tang, Nan
- Published
- 2024
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45. Intelligent Diagnosis of Hypopigmented Dermatoses and Intelligent Evaluation of Vitiligo Severity on the Basis of Deep Learning.
- Author
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Huang, Hequn, Wang, Changqing, Gao, Geng, Fan, Zhuangzhuang, Ren, Lulu, Wang, Rui, Chen, Zhu, Huang, Maoxin, Li, Mei, Yang, Fei, and Xiao, Fengli
- Subjects
DEEP learning ,DERMATOLOGISTS ,SKIN diseases ,TELEMEDICINE ,DIAGNOSIS - Abstract
Introduction: There is a lack of objective, accurate, and convenient methods for classification diagnostic hypopigmented dermatoses (HD) and severity evaluation of vitiligo. To achieve an accurate and intelligent classification diagnostic model of HD and severity evaluation model of vitiligo using a deep learning-based method. Methods: A total of 11,483 images from 4744 patients with HD were included in this study. An optimal diagnostic model was constructed by merging the squeeze-and-excitation (SE) module with the candidate model, its diagnostic efficiency was compared with that of 98 dermatologists. An objective severity evaluation indicator was proposed through weighting method and combined with a segmentation model to form a severity evaluation model, which was then compared with the assessments conducted by three experienced dermatologists using the naked eye. Results: The improved diagnosis model SE_ResNet-18 outperformed the other 11 classic models with an accuracy of 0.9389, macro-specificity of 0.9878, and macro-f1 score of 0.9395, and outperformed the different categories of 98 dermatologists (P < 0.001). The weighted Kappa test indicated medium consistency between the Indicator
v and the VASIchange (K = 0.567, P < 0.05). The optimal segmented model, HR-Net, had 0.8421 mIOU. The model-based severity evaluation results were not significantly different among the three experienced dermatologists. Conclusions: This study proposes an objective, accurate, and convenient hybrid model for diagnosing HD and evaluating the severity of vitiligo, providing a method for dermatologists especially in grassroots hospitals, and provides a foundation for telemedicine. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
46. Cellular stress and epigenetic regulation in adult stem cells.
- Author
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Llewellyn, Joey, Baratam, Rithvik, Culig, Luka, and Beerman, Isabel
- Published
- 2024
- Full Text
- View/download PDF
47. In vitro and in silico studies of a di-copper cyclam complex for anticancer application: functionalization, cytotoxicity, ADMET profile and molecular docking as a VEGFR1 inhibitor.
- Author
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El Bali, Brahim, Direm, Amani, Lachkar, Mohammed, Díaz-García, Diana, Gómez-Ruiz, Santiago, and Dihazi, Hassan
- Abstract
Single crystals of the dinuclear cyclam complex (1, 4, 8, 11-tetraazacyclotetradecane)-copper (ii) tetrachlorocuprate {[Cu(14-ane)]CuCl
4 } (1) were prepared by soft chemistry. The powder, resulting from their grinding, was characterized by FTIR spectroscopy and functionalized using silica support materials MSN and halloysite H. The in vitro studies conducted on (1) formulated with MSN or halloysite H against kidney epithelial cell line (HK2) and renal cancer cell (RCC) lines (Caki-2, TW, LN78) demonstrated significant antiproliferative effects for both renal cell types. An increase in the apoptosis levels in the RCC lines underscoring the potential as an anticancer therapeutic agent was observed. These findings were corroborated by an in silico analysis aimed at exploring the ADMET profile of (1), indicating favorable aqueous solubility, brain penetration and druglikeness properties akin to FDA-approved VEGFR inhibitors such as sorafenib and cabozantinib. To gain deeper insights into the anticancer behavior of (1), molecular docking simulations against the vascular endothelial growth factor receptor VEGFR1 (PDB entry code 3HNG) were conducted. The evaluation of the interacting modes and binding sites in the 3HNG-(1) target–ligand complex revealed diverse hydrogen-bonding interactions within the receptor's binding pocket, suggesting a promising inhibition potential of (1) against VEGFR1. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
48. Age and gender differences in skin characteristics: a study of 2543 Japanese individuals using advanced skin imaging techniques.
- Author
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Yoshizaki, Ayumi, Sato, Shinichi, Omatsu, Jun, and Osuji, Yurika
- Subjects
SKIN aging ,WRINKLES (Skin) ,JAPANESE people ,SKIN imaging ,AGE differences - Abstract
Skin aging is a multifaceted process influenced by genetic, environmental, and immunological factors, resulting in visible changes such as wrinkles, pigmentation, and alterations in skin texture. Despite its high relevance, there is a paucity of large-scale studies focusing on visible age-related changes in facial skin among Japanese populations, particularly by region. This study aims to address these gaps by examining age- and sex-specific skin changes in a large cohort of 2,543 Japanese subjects using advanced skin imaging techniques. The study included subjects aged 17–71 years who provided informed consent. The imaging system captures facial images using standard light, UV light, and two types of polarized light, applying deep learning techniques to analyze various skin parameters. Statistical analysis was performed to evaluate correlations between age, gender, and skin characteristics. Results indicated significant correlations between age and skin color across all domains, with large pores on the nose showing the highest correlation with age. Sebum and porphyrin levels exhibited a decreasing trend with age, though correlation coefficients were low. Cheek gloss, both in area and color, showed relatively high correlation coefficients. Pigmentation-related items, such as spots and melanin, demonstrated significant age correlations, particularly in areas like the corners of the eyes, under the eyes, and cheeks. Wrinkles and fine wrinkles correlated with age in various regions, though not on the forehead. The findings highlight the importance of understanding regional and demographic variations in skin aging to develop effective anti-aging treatments. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
49. Characterization and Experimental Use of Multiple Myeloma Bone Marrow Endothelial Cells and Progenitors.
- Author
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Garbicz, Filip, Kaszkowiak, Marcin, Dudkiewicz-Garbicz, Julia, Dorfman, David M., Ostrowska, Julia, Barankiewicz, Joanna, Salomon-Perzyński, Aleksander, Lech-Marańda, Ewa, Nguyen, Tuyet, Juszczyński, Przemyslaw, Carrasco, Ruben D., and Misiewicz-Krzeminska, Irena
- Subjects
BONE marrow cancer ,BONE marrow cells ,CELL anatomy ,PROGENITOR cells ,MULTIPLE myeloma - Abstract
Multiple myeloma (MM) is a plasma cell malignancy that resides within the bone marrow microenvironment, relying heavily on interactions with its cellular components. Among these, endothelial cells (ECs) play a pivotal role in MM progression and the development of therapeutic resistance. In this study, we analyzed publicly available single-cell RNA sequencing data to identify unique pathway activations distinguishing ECs from MM patients and healthy donors. We developed a novel protocol to isolate and culture endothelial progenitor cells (EPCs) and ECs directly from MM patient bone marrow, demonstrating their ability to promote myeloma cell proliferation. Validation studies confirmed that these MM-derived ECs exhibit angiogenic potential as well as the expression of characteristic endothelial lineage markers. These findings underscore the critical role of bone marrow ECs in the MM tumor microenvironment and highlight potential new therapeutic targets to disrupt MM progression. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
50. Skin cancer identification utilizing deep learning: A survey.
- Author
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Meedeniya, Dulani, De Silva, Senuri, Gamage, Lahiru, and Isuranga, Uditha
- Subjects
IMAGE recognition (Computer vision) ,TRANSFORMER models ,CONVOLUTIONAL neural networks ,SKIN cancer ,SKIN imaging - Abstract
Melanoma, a highly prevalent and lethal form of skin cancer, has a significant impact globally. The chances of recovery for melanoma patients substantially improve with early detection. Currently, deep learning (DL) methods are gaining popularity in assisting with the early identification of melanoma. Despite their high performance, relying solely on an image classifier undermines the credibility of the application and makes it difficult to understand the rationale behind the model's predictions highlighting the need for Explainable AI (XAI). This study provides a survey on skin cancer identification using DL techniques utilized in studies from 2017 to 2024. Compared to existing survey studies, the authors address the latest related studies covering several public skin cancer image datasets and focusing on segmentation, classification based on convolutional neural networks and vision transformers, and explainability. The analysis and the comparisons of the existing studies will be beneficial for the researchers and developers in this area, to identify the suitable techniques to be used for automated skin cancer image classification. Thereby, the survey findings can be used to implement support applications advancing the skin cancer diagnosis process. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
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