2,492 results on '"Ria, F"'
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2. Sinningia flammea Chautems & Valqu��ria F. Dutra & Fontana & Peixoto & Perret & Rossini 2019, spec. nova
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Chautems, Alain, Valqu��ria F. Dutra, Fontana, Andr�� P., Peixoto, Mauro, Perret, Mathieu, and Rossini, Josiene
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Tracheophyta ,Magnoliopsida ,Sinningia ,Sinningia flammea ,Biodiversity ,Gesneriaceae ,Plantae ,Taxonomy ,Lamiales - Abstract
Sinningia flammea Chautems & Rossini, spec. nova (Fig. 2A, 3). Holotypus: BRAZIL. Esp��rito Santo: Itagua��u, Cachoei- r��o, propriedade Sr. Hil��rio Lopes, trilha da cachoeira, 8.IX.2006, fl., R.C. Britto et al. 134 (MBML-39758!). This species resembles Sinningia aghensis Chautems by the habit, the leaves nearly whorled and the long ascending peduncles, but differs by having smaller leaf blades that are vinaceous abaxially and by the narrow tubular bright orange corollas with a greenish-yellow throat (vs. leaves green abaxially and wide tubular funnel-shape and purple corollas, with a darker purple and white marbled throat). Herb rupicolous, arising from perennial tuber, 2���9 �� 3���10 cm in diam. Stems erect, 8���30 cm tall, usually unbranched, reddish to vinaceous with some green streaks, villose, trichomes 3���4 mm long. Leaves usually 2 pairs, decussate, isophyllous, condensed in an apparent whorl of 4 toward the apex of the stem, petiole 0,3��� 1 cm long, blade ovate to obovate 2.2���9 �� 1.6���6.7 cm, dark green and pubescent on adaxial face, vinaceous and incanoustomentose abaxially, base obtuse, apex obtuse, margin crenatedenticulate, 7���9 pairs of veins, vinaceous abaxially. Inflorescence 1���2 pair(s) of ascending peduncles, in the axils of upper leafs or small bracts below the leafs, 10���27 cm long, vinaceous with greenish dots, villose, each peduncle carrying at their apex 4���12 flowers organized in pair-flowered cymes. Flowers borne on erect to horizontal pedicels, 1.3���4.7 cm long, vinaceous, villose. Calyx campanulate, sepals fused at base for 3 mm, green with reddish apex, 9 �� 3 mm, triangular to lanceolate, pubes- cent with glandular trichomes. Corolla tubular, 4.2���4.5 cm long, outside dark vinaceous at young buds stage, brightly orange with touch of yellow at maturity, pubescent with longer eglandular and shorter glandular trichomes, tube at the very base enlarged forming two dorsal bulges that are the nectary chambers, c. 7 mm diam., then, briefly constricted to around 3���4 mm in diam., widening progressively to about 8 mm in diam., throat greenish yellow, lobes equal, patent, internally greenish yellow at base, orange at the apex with yellow veins. Stamens 4, included, filaments 3.9���4.2 cm long, white or yellowish, puberulous, anthers 3 �� 2 mm, coherent by their apex and side, star-shaped, pollen white; nectary formed by five separate glands of 1���2 �� 1 mm; ovary conical, 5���7 mm long, whitish, puberulous, style 4.5���4.8 cm long, white, puberulous, barely exserted at maturity, stigma stomatomorphic. Fruit a conical capsule, beaked at the apex, fully dehiscent, 8���10 �� 4���5 mm, seeds fusiform to prolate, dark brown, 0.5���0.6 mm. Etymology. ��� The name refers to the bright and vivid yellow-orange color of the corolla that evokes fire flames. Distribution and ecology. ��� This species is endemic to the eastern part of Esp��rito Santo State (Fig. 1). It has only been encountered on inselbergs above 700 m alt. in the Municipalities of Itagua��u and Colatina. Scattered populations have been found growing on sun exposed and steep granitic rock, among clumps of large Bromeliaceae and Velloziaceae. Phenology. ��� Flowers were observed between July and September. Mature fruits were registered on cultivated material around November-December. Conservation status. ��� The new species has been observed so far in only two localities representing two locations. None of them are part of the protected area network. Populations are composed of a few scattered individuals. Threats in those locations are granite extraction from the inselbergs and extension of monoculture of coffee or Eucalyptus L���H��r. in the immediate surroundings. With an EOO Sinningia flammea is assigned a preliminary assessment as ���Endangered��� [EN B1ab(iii)] using the IUCN Red List (IUCN, 2012). Notes. ��� The new species is morphologically related to S. aghensis, sharing similarities in the whorled phyllotaxis, the leaf blade shape and the very long peduncles. Nevertheless, it differs by having much smaller leaf blades and narrow tubular bright orange corollas (vs tubular-campanulate dark purple corollas). Although flowers arise from long peduncles above a leafy stem and not directly from the tuber, the long tubular corollas resemble S. helioana Chautems & Rossini, but color and size differ (bright orange tube 4.2��� 4.5 cm long with greenish hues in throat vs tube red 2.5���3 cm long with throat cream). Preliminary phylogenetic data place the new species in close relationship with the two above mentioned taxa within the clade ��� Corytholoma ��� (PERRET et al. 2003, 2007). Material of this species was introduced in cultivation under the provisional name Sinningia sp. ���Itaguassu���. Paratypus. ��� BRAZIL. Esp��rito Santo: Colatina, Itapina, morro do Maquiji, C��rrego Maquiji, Fazenda Pedra Grande, 27.VII.2009, fl., A.P. Fontana & L. Menini Neto 6076 (MBML-47808)., Published as part of Chautems, Alain, Valqu��ria F. Dutra,, Fontana, Andr�� P., Peixoto, Mauro, Perret, Mathieu & Rossini, Josiene, 2019, Three new species of Sinningia (Gesneriaceae) endemic to Esp��rito Santo, Brazil, pp. 33-42 in Candollea 74 (1) on pages 34-37, DOI: 10.15553/c2019v741a5, http://zenodo.org/record/3404226, {"references":["IUCN (2012). IUCN Red List Categories and Criteria: Version 3.1 ed. 2. IUCN Species Survival Commission, IUCN, Gland & Cambridge.","PERRET M., A. CHAUTEMS, R. SPICHIGER, G. KITE & V. SAVOLAINEN (2003). Systematics and evolution of tribe Sinningieae (Gesneriaceae): Evidence from phylogenetic analyses of six plastid DNA regions and nuclear ncpGS. Am. J. Bot. 90: 445 - 460."]}
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- 2019
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3. Secrets and lies of host-microbial interactions: MHC restriction and trans-regulation of T cell trafficking conceal the role of microbial agents on the edge between health and multifactorial/complex diseases
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Ria, Francesco, Delogu, Giovanni, Ingrosso, L, Sali, Michela, Di Sante, Gabriele, Ria, F (ORCID:0000-0002-8444-0307), Delogu, G (ORCID:0000-0003-0182-8267), Sali, M (ORCID:0000-0003-3609-2990), Di Sante, G (ORCID:0000-0001-6608-3388), Ria, Francesco, Delogu, Giovanni, Ingrosso, L, Sali, Michela, Di Sante, Gabriele, Ria, F (ORCID:0000-0002-8444-0307), Delogu, G (ORCID:0000-0003-0182-8267), Sali, M (ORCID:0000-0003-3609-2990), and Di Sante, G (ORCID:0000-0001-6608-3388)
- Abstract
Here we critically discuss data supporting the view that microbial agents (pathogens, pathobionts or commensals alike) play a relevant role in the pathogenesis of multifactorial diseases, but their role is concealed by the rules presiding over T cell antigen recognition and trafficking. These rules make it difficult to associate univocally infectious agents to diseases' pathogenesis using the paradigm developed for canonical infectious diseases. (Cross-)recognition of a variable repertoire of epitopes leads to the possibility that distinct infectious agents can determine the same disease(s). There can be the need for sequential infection/colonization by two or more microorganisms to develop a given disease. Altered spreading of infectious agents can determine an unwanted activation of T cells towards a pro-inflammatory and trafficking phenotype, due to differences in the local microenvironment. Finally, trans-regulation of T cell trafficking allows infectious agents unrelated to the specificity of T cell to modify their homing to target organs, thereby driving flares of disease. The relevant role of microbial agents in largely prevalent diseases provides a conceptual basis for the evaluation of more specific therapeutic approaches, targeted to prevent (vaccine) or cure (antibiotics and/or Biologic Response Modifiers) multifactorial diseases.
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- 2024
4. ChatGPT versus Radiology Institutional Websites: Comparative Analysis of Radiation Protection Information Provided to Patients.
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Jankowski S, Rotzinger D, Ria F, and Pozzessere C
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- Humans, Radiology, Patient Education as Topic, Radiation Protection methods, Internet
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- 2024
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5. QUANTITATIVE EVALUATION OF RISK IN CT: MANAGING DOSE REDUCTION AND EFFECTIVE DIAGNOSIS
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Ria, F., primary
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- 2023
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6. DETECTABILITY INDEX TO STANDARDISE CT OPTIMIZAZION: A MULTICENTER STUDY
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Villa, R., primary, Daniotti, M., additional, Bertolini, M., additional, Cannillo, B., additional, Cavallari, M., additional, Cimolai, S., additional, D’Alessio, A., additional, De Marco, P., additional, De Mattia, C., additional, De Monte, F., additional, Felisi, M., additional, Ferrari, C., additional, Gilio, M.A., additional, Giovannini, G., additional, Lecchi, M., additional, Lisciandro, F., additional, Lizio, D., additional, Luraschi, F., additional, Mattacchioni, A., additional, Moresco, P., additional, Oberhofer, N., additional, Origgi, D.A., additional, Pietrobon, F., additional, Porzio, M., additional, Quattrocchi, M., additional, Ravaglia, V., additional, Ria, F., additional, Scabbio, C., additional, Strocchi, S., additional, Vaccara, E.M.L., additional, Zorz, A., additional, and Paruccini, N., additional
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- 2023
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7. Proceedings Virtual Imaging Trials in Medicine 2024.
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Abadi E, Badano A, Bakic P, Bliznakova K, Bosmans H, Carton AK, Frangi A, Glick S, Kinahan P, Lo J, Maidment A, Ria F, Samei E, Sechopoulos I, Segars P, Tanaka R, and Vancoillie L
- Abstract
This submission comprises the proceedings of the 1st Virtual Imaging Trials in Medicine conference, organized by Duke University on April 22-24, 2024. The listed authors serve as the program directors for this conference. The VITM conference is a pioneering summit uniting experts from academia, industry and government in the fields of medical imaging and therapy to explore the transformative potential of in silico virtual trials and digital twins in revolutionizing healthcare. The proceedings are categorized by the respective days of the conference: Monday presentations, Tuesday presentations, Wednesday presentations, followed by the abstracts for the posters presented on Monday and Tuesday.
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- 2024
8. Technology Characterization Through Diverse Evaluation Methodologies: Application to Thoracic Imaging in Photon-Counting Computed Tomography.
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Rajagopal JR, Schwartz FR, McCabe C, Farhadi F, Zarei M, Ria F, Abadi E, Segars P, Ramirez-Giraldo JC, Jones EC, Henry T, Marin D, and Samei E
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Objective: Different methods can be used to condition imaging systems for clinical use. The purpose of this study was to assess how these methods complement one another in evaluating a system for clinical integration of an emerging technology, photon-counting computed tomography (PCCT), for thoracic imaging., Methods: Four methods were used to assess a clinical PCCT system (NAEOTOM Alpha; Siemens Healthineers, Forchheim, Germany) across 3 reconstruction kernels (Br40f, Br48f, and Br56f). First, a phantom evaluation was performed using a computed tomography quality control phantom to characterize noise magnitude, spatial resolution, and detectability. Second, clinical images acquired using conventional and PCCT systems were used for a multi-institutional reader study where readers from 2 institutions were asked to rank their preference of images. Third, the clinical images were assessed in terms of in vivo image quality characterization of global noise index and detectability. Fourth, a virtual imaging trial was conducted using a validated simulation platform (DukeSim) that models PCCT and a virtual patient model (XCAT) with embedded lung lesions imaged under differing conditions of respiratory phase and positional displacement. Using known ground truth of the patient model, images were evaluated for quantitative biomarkers of lung intensity histograms and lesion morphology metrics., Results: For the physical phantom study, the Br56f kernel was shown to have the highest resolution despite having the highest noise and lowest detectability. Readers across both institutions preferred the Br56f kernel (71% first rank) with a high interclass correlation (0.990). In vivo assessments found superior detectability for PCCT compared with conventional computed tomography but higher noise and reduced detectability with increased kernel sharpness. For the virtual imaging trial, Br40f was shown to have the best performance for histogram measures, whereas Br56f was shown to have the most precise and accurate morphology metrics., Conclusion: The 4 evaluation methods each have their strengths and limitations and bring complementary insight to the evaluation of PCCT. Although no method offers a complete answer, concordant findings between methods offer affirmatory confidence in a decision, whereas discordant ones offer insight for added perspective. Aggregating our findings, we concluded the Br56f kernel best for high-resolution tasks and Br40f for contrast-dependent tasks., (Copyright © 2024 Wolters Kluwer Health, Inc. All rights reserved.)
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- 2024
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9. Myelography Using Energy-Integrating Detector CT Versus Photon-Counting Detector CT for Detection of CSF-Venous Fistulas in Patients With Spontaneous Intracranial Hypotension.
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Schwartz FR, Kranz PG, Malinzak MD, Cox DN, Ria F, McCabe C, Harrawood B, Leithe LG, Samei E, and Amrhein TJ
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- Humans, Female, Male, Middle Aged, Retrospective Studies, Aged, Adult, Contrast Media, Photons, Cerebrospinal Fluid Leak diagnostic imaging, Intracranial Hypotension diagnostic imaging, Myelography methods, Tomography, X-Ray Computed methods
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BACKGROUND. CSF-venous fistulas (CVFs), which are an increasingly recognized cause of spontaneous intracranial hypotension (SIH), are often diminutive in size and exceedingly difficult to detect by conventional imaging. OBJECTIVE. This purpose of this study was to compare energy-integrating detector (EID) CT myelography and photon-counting detector (PCD) CT myelography in terms of image quality and diagnostic performance for detecting CVFs in patients with SIH. METHODS. This retrospective study included 38 patients (15 men and 23 women; mean age, 55 ± 10 [SD] years) with SIH who underwent both clinically indicated EID CT myelography (slice thickness, 0.625 mm) and PCD CT myelography (slice thickness, 0.2 mm; performed in ultrahigh-resolution mode) to assess for CSF leak. Three blinded radiologists reviewed examinations in random order, assessing image noise, discernibility of spinal nerve root sleeves, and overall image quality (each assessed using a scale of 0-100, with 100 denoting highest quality) and recording locations of the CVFs. Definite CVFs were defined as CVFs described in CT myelography reports using unequivocal language and having an attenuation value greater than 70 HU. RESULTS. For all readers, PCD CT myelography, in comparison with EID CT myelography, showed higher mean image noise (reader 1: 69.9 ± 18.5 [SD] vs 37.6 ± 15.2; reader 2: 59.5 ± 8.7 vs 49.3 ± 12.7; and reader 3: 57.6 ± 13.2 vs 42.1 ± 16.6), higher mean nerve root sleeve discernibility (reader 1: 81.6 ± 21.7 [SD] vs 30.4 ± 13.6; reader 2: 83.6 ± 10 vs 70.1 ± 18.9; and reader 3: 59.6 ± 13.5 vs 50.5 ± 14.4), and higher mean overall image quality (reader 1: 83.2 ± 20.0 [SD] vs 38.1 ± 13.5; reader 2: 80.1 ± 10.1 vs 72.4 ± 19.8; and reader 3: 57.8 ± 11.2 vs 51.9 ± 13.6) (all p < .05). Eleven patients had a definite CVF. Sensitivity and specificity of EID CT myelography and PCD CT myelography for the detection of definite CVF were 45% and 96% versus 64% and 85%, respectively, for reader 1; 36% and 100% versus 55% and 96%, respectively, for reader 2; and 57% and 100% versus 55% and 93%, respectively, for reader 3. The sensitivity was significantly higher for PCD CT myelography than for EID CT myelography for reader 1 and reader 2 (both p < .05) and was not significantly different between the two techniques for reader 3 ( p = .45); for all three readers, specificity was not significantly different between the two modalities (all p > .05). CONCLUSION. In comparison with EID CT myelography, PCD CT myelography yielded significantly improved image quality with significantly higher sensitivity for CVFs (for two of three readers), without significant loss of specificity. CLINICAL IMPACT. The findings support a potential role for PCD CT myelography in facilitating earlier diagnosis and targeted treatment of SIH, avoiding high morbidity during potentially prolonged diagnostic workups.
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- 2024
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10. Characterizing imaging radiation risk in a population of 8918 patients with recurrent imaging for a better effective dose.
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Ria F, Rehani MM, and Samei E
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- Humans, Radiation Dosage, Phantoms, Imaging, Monte Carlo Method, Tomography, X-Ray Computed adverse effects, Tomography, X-Ray Computed methods, Radiation Protection methods
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An updated extension of effective dose was recently introduced, namely relative effective dose ( E r ), incorporating age and sex factors. In this study we extended E r application to a population of about 9000 patients who underwent multiple CT imaging exams, and we compared it with other commonly used radiation protection metrics in terms of their correlation with radiation risk. Using Monte Carlo methods, E r , dose-length-product based effective dose ( E DLP ), organ-dose based effective dose ( E OD ), and organ-dose based risk index ( RI ) were calculated for each patient. Each metric's dependency to RI was assessed in terms of its sensitivity and specificity. E r showed the best sensitivity, specificity, and agreement with RI (R
2 = 0.97); while E DLP yielded the lowest specificity and, along with E OD , the lowest sensitivity. Compared to other metrics, E r provided a closer representation of patient and group risk also incorporating age and sex factors within the established framework of effective dose., (© 2024. The Author(s).)- Published
- 2024
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11. Fighting autoinflammation in FIRES: The role of interleukins and early immunomodulation
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Perulli, M., Cicala, G., Turrini, I., Musto, E., Quintiliani, M., Gambardella, M. L., Pulitano, S. M., Bompard, S., Staccioli, S., Carmillo, L., Di Sante, G., Ria, F., Veredice, C., Contaldo, I., Battaglia, D., Perulli M., Cicala G., Turrini I., Musto E., Quintiliani M., Gambardella M. L., Pulitano S. M. (ORCID:0000-0002-8496-379X), Bompard S., Staccioli S., Carmillo L., Di Sante G. (ORCID:0000-0001-6608-3388), Ria F. (ORCID:0000-0002-8444-0307), Veredice C., Contaldo I., Battaglia D. (ORCID:0000-0003-0491-4021), Perulli, M., Cicala, G., Turrini, I., Musto, E., Quintiliani, M., Gambardella, M. L., Pulitano, S. M., Bompard, S., Staccioli, S., Carmillo, L., Di Sante, G., Ria, F., Veredice, C., Contaldo, I., Battaglia, D., Perulli M., Cicala G., Turrini I., Musto E., Quintiliani M., Gambardella M. L., Pulitano S. M. (ORCID:0000-0002-8496-379X), Bompard S., Staccioli S., Carmillo L., Di Sante G. (ORCID:0000-0001-6608-3388), Ria F. (ORCID:0000-0002-8444-0307), Veredice C., Contaldo I., and Battaglia D. (ORCID:0000-0003-0491-4021)
- Abstract
Febrile infection-related epilepsy syndrome (FIRES) is a challenging condition with unfavorable outcome in most cases. Preliminary evidence suggests that some interleukins, in particular IL-1 Receptor Antagonist (IL-1RA), could be elevated due to a functional deficiency of anti-inflammatory pathways. Therefore, treatment strategies acting on innate immunity could represent a targeted treatment. We describe the case of an 11-year-old child with super-refractory status epilepticus (SE), lasting more than two months. After being treated aggressively with antiseizure medications, anesthetics and empiric treatment for autoimmune encephalitis without success, she responded to anakinra and ketogenic diet. Escalation of the therapy was supported by the finding of a very high serum level of IL-1RA. This immunomodulatory approach allowed to discharge the child from intensive care 48 days after the SE onset. After more than one year follow-up the patient has moderate intellectual disability but with good language skills; she is seizure free and without motor deficits. This case suggests that serum IL-1RA serum levels may help to support treatment escalation. Moreover, anakinra and ketogenic diet represent encouraging immunomodulatory strategies which deserve further studies and could potentially have a synergistic effect. Finally, structured neuropsychological testing is an important outcome measure that will help to define the effectiveness of different treatment strategies.
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- 2022
12. Therapeutic Strategies to Prevent the Recurrence of Nasal Polyps after Surgical Treatment: An Update and In Vitro Study on Growth Inhibition of Fibroblasts
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Rizzi, Angela, Gammeri, L., Cordiano, R., Valentini, Mariagrazia, Centrone, M., Marrone, S., Inchingolo, Riccardo, Lohmeyer, F. M., Cavaliere, C., Ria, Francesco, Cadoni, Gabriella, Gangemi, S., Nucera, Eleonora, Rizzi A. (ORCID:0000-0002-6795-746X), Valentini M., Inchingolo R. (ORCID:0000-0003-2843-9966), Ria F. (ORCID:0000-0002-8444-0307), Cadoni G. (ORCID:0000-0001-8244-784X), Nucera E. (ORCID:0000-0002-0565-7680), Rizzi, Angela, Gammeri, L., Cordiano, R., Valentini, Mariagrazia, Centrone, M., Marrone, S., Inchingolo, Riccardo, Lohmeyer, F. M., Cavaliere, C., Ria, Francesco, Cadoni, Gabriella, Gangemi, S., Nucera, Eleonora, Rizzi A. (ORCID:0000-0002-6795-746X), Valentini M., Inchingolo R. (ORCID:0000-0003-2843-9966), Ria F. (ORCID:0000-0002-8444-0307), Cadoni G. (ORCID:0000-0001-8244-784X), and Nucera E. (ORCID:0000-0002-0565-7680)
- Abstract
Chronic rhinosinusitis with nasal polyps (CRSwNP) is the most bothersome phenotype of chronic rhinosinusitis, which is typically characterized by a Type 2 inflammatory reaction, comorbidities and high rates of nasal polyp recurrence, causing severe impact on quality of life. Nasal polyp recurrence rates, defined as the number of patients undergoing revision endoscopic sinus surgery, are 20% within a 5 year period after surgery. The cornerstone of CRSwNP management consists of anti-inflammatory treatment with local corticosteroids. We performed a literature review regarding the therapeutic strategies used to prevent nasal polyp recurrence after surgical treatment. Finally, we report an in vitro study evaluating the efficacy of lysine-acetylsalicylic acid and other non-steroidal anti-inflammatory drugs (ketoprofen and diclofenac) on the proliferation of fibroblasts, obtained from nasal polyp tissue samples. Our study demonstrates that diclofenac, even more so than lysine-acetylsalicylic acid, significantly inhibits fibroblast proliferation and could be considered a valid therapeutic strategy in preventing CRSwNP recurrence.
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- 2023
13. CO-11.5 - DETECTABILITY INDEX TO STANDARDISE CT OPTIMIZAZION: A MULTICENTER STUDY
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Villa, R., Daniotti, M., Bertolini, M., Cannillo, B., Cavallari, M., Cimolai, S., D’Alessio, A., De Marco, P., De Mattia, C., De Monte, F., Felisi, M., Ferrari, C., Gilio, M.A., Giovannini, G., Lecchi, M., Lisciandro, F., Lizio, D., Luraschi, F., Mattacchioni, A., Moresco, P., Oberhofer, N., Origgi, D.A., Pietrobon, F., Porzio, M., Quattrocchi, M., Ravaglia, V., Ria, F., Scabbio, C., Strocchi, S., Vaccara, E.M.L., Zorz, A., and Paruccini, N.
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- 2023
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14. The Multifaceted S100B Protein: A Role in Obesity and Diabetes?
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Michetti F, Di Sante G, Clementi ME, Valeriani F, Mandarano M, Ria F, Di Liddo R, Rende M, and Romano Spica V
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- Humans, Obesity, Adiposity, Adipose Tissue, Astrocytes, S100 Calcium Binding Protein beta Subunit, Diabetes Mellitus
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The S100B protein is abundant in the nervous system, mainly in astrocytes, and is also present in other districts. Among these, the adipose tissue is a site of concentration for the protein. In the light of consistent research showing some associations between S100B and adipose tissue in the context of obesity, metabolic disorders, and diabetes, this review tunes the possible role of S100B in the pathogenic processes of these disorders, which are known to involve the adipose tissue. The reported data suggest a role for adipose S100B in obesity/diabetes processes, thus putatively re-proposing the role played by astrocytic S100B in neuroinflammatory/neurodegenerative processes.
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- 2024
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15. SMA-miRs (MiR-181a- 5p, -324-5p, and -451a) are overexpressed in spinal muscular atrophy skeletal muscle and serum samples
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Abiusi, E., Infante, P., Cagnoli, C., Severini, L. L., Pane, M., Coratti, G., Pera, M. C., D'amico, A., Diano, F., Novelli, A., Spartano, S., Fiori, S., Baranello, G., Moroni, I., Mora, M., Pasanisi, M. B., Pocino, K., Le Pera, L., D'Amico, D., Travaglini, L., Ria, F., Bruno, C., Locatelli, D., Bertini, E. S., Morandi, L. O., Mercuri, E., Di Marcotullio, L., Tiziano, F. D., Abiusi E. (ORCID:0000-0001-9028-012X), Pane M. (ORCID:0000-0002-4851-6124), Coratti G. (ORCID:0000-0001-6666-5628), Pera M. C. (ORCID:0000-0001-6777-1721), D'amico A., Diano F., Novelli A., Spartano S., Fiori S., Baranello G., Pocino K. (ORCID:0000-0003-2456-5308), Ria F. (ORCID:0000-0002-8444-0307), Bertini E. S., Mercuri E. (ORCID:0000-0002-9851-5365), Tiziano F. D. (ORCID:0000-0002-5545-6158), Abiusi, E., Infante, P., Cagnoli, C., Severini, L. L., Pane, M., Coratti, G., Pera, M. C., D'amico, A., Diano, F., Novelli, A., Spartano, S., Fiori, S., Baranello, G., Moroni, I., Mora, M., Pasanisi, M. B., Pocino, K., Le Pera, L., D'Amico, D., Travaglini, L., Ria, F., Bruno, C., Locatelli, D., Bertini, E. S., Morandi, L. O., Mercuri, E., Di Marcotullio, L., Tiziano, F. D., Abiusi E. (ORCID:0000-0001-9028-012X), Pane M. (ORCID:0000-0002-4851-6124), Coratti G. (ORCID:0000-0001-6666-5628), Pera M. C. (ORCID:0000-0001-6777-1721), D'amico A., Diano F., Novelli A., Spartano S., Fiori S., Baranello G., Pocino K. (ORCID:0000-0003-2456-5308), Ria F. (ORCID:0000-0002-8444-0307), Bertini E. S., Mercuri E. (ORCID:0000-0002-9851-5365), and Tiziano F. D. (ORCID:0000-0002-5545-6158)
- Abstract
Background: Spinal muscular atrophy (SMA) is a neuromuscular disorder characterized by the degeneration of the second motor neuron. The phenotype ranges from very severe to very mild forms. All patients have the homozygous loss of the SMN1 gene and a variable number of SMN2 (generally 2–4 copies), inversely related to the severity. The amazing results of the available treatments have made compelling the need of prognostic biomarkers to predict the progression trajectories of patients. Besides the SMN2 products, few other biomarkers have been evaluated so far, including some miRs. Methods: We performed whole miRNome analysis of muscle samples of patients and controls (14 biopsies and 9 cultures). The levels of muscle differentially expressed miRs were evaluated in serum samples (51 patients and 37 controls) and integrated with SMN2 copies, SMN2 full-length transcript levels in blood and age (SMA-score). Results: Over 100 miRs were differentially expressed in SMA muscle; 3 of them (hsa-miR-181a-5p, -324-5p, -451a; SMA-miRs) were significantly upregulated in the serum of patients. The severity predicted by the SMA-score was related to that of the clinical classification at a correlation coefficient of 0.87 (p<10-5). Conclusions: MiRNome analyses suggest the primary involvement of skeletal muscle in SMA pathogenesis. The SMA-miRs are likely actively released in the blood flow; their function and target cells require to be elucidated. The accuracy of the SMA-score needs to be verified in replicative studies: If confirmed, its use could be crucial for the routine prognostic assessment, also in presymptomatic patients.
- Published
- 2021
16. Simultaneous onset of mycobacterium kansasii pulmonary infection and systemic lupus erythematosus: A case report
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Bruno, D., Tanti, G., Cingolani, A., Ria, F., Gremese, E., Mirone, L., Bruno D., Tanti G., Cingolani A. (ORCID:0000-0002-3793-2755), Ria F. (ORCID:0000-0002-8444-0307), Gremese E. (ORCID:0000-0002-2248-1058), Mirone L. (ORCID:0000-0001-5820-5533), Bruno, D., Tanti, G., Cingolani, A., Ria, F., Gremese, E., Mirone, L., Bruno D., Tanti G., Cingolani A. (ORCID:0000-0002-3793-2755), Ria F. (ORCID:0000-0002-8444-0307), Gremese E. (ORCID:0000-0002-2248-1058), and Mirone L. (ORCID:0000-0001-5820-5533)
- Abstract
Patient: Female, 19-year-old Final Diagnosis: Systemic lupus erythematosus Symptoms: Cough • Fever • malaise and fatigue • polyarthralgia • skin rash Medication: — Clinical Procedure: — Specialty: Rheumatology Objective: Background: Case Report: Conclusions: Unknown ethiology Systemic lupus erythematosus (SLE) is a systemic autoimmune disease resulting from dysregulation of the immune response. In genetically predisposed subjects, infections reputedly trigger an immune activation leading to autoimmunity and overt autoimmune diseases such as SLE. We report the case of a 19-year-old woman who presented to our hospital reporting high-grade fever, dry cough, and polyarthralgia despite a course of empiric antibiotic and steroid therapy administered by her general practi-tioner (GP). On physical examination, she had a malar rash, a palpable erythematous maculopapular non-itchy rash over the limbs and trunk, and mild polyarthritis. A contrast computed tomography (CT) scan of the chest showed a pulmonary right upper-lobe consolidation with air bronchogram and multiple necrotizing conglom-erate mediastinal lymph nodes. Culturing of collected samples from endobronchial ultrasound-guided trans-bronchial needle aspiration (EBUS-TBNA) of the mediastinal lymph node revealed growth of Mycobacterium kansasii. Antinuclear antibodies (ANA) and lupus anticoagulant (LAC) were positive. A diagnosis of M. kansasii infection associated with SLE was made. She was started on anti-mycobacterial and hydroxychloroquine therapy and entered into a joint rheumatological and infectious disease follow-up. Six months later, a CT scan with positron emission tomography (PET) showed a significant reduction in size of the basal right upper-lobe consolidation and hypermetabolic activity in multiple pulmonary areas and mediastinal lymph nodes. ANA and LAC tests were repeated and remained positive. The decision was made to continue the ongoing therapy course for 1 year in total. Clinical and experimental s
- Published
- 2021
17. Image quality of photon counting and energy integrating chest CT - Prospective head-to-head comparison on same patients.
- Author
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Schwartz FR, Ria F, McCabe C, Zarei M, Rajagopal J, Molvin L, Marin D, O'Sullivan-Murphy B, Kalisz KR, Tailor TD, Washington L, Henry T, and Samei E
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- Aged, Humans, Male, Middle Aged, Clinical Protocols, Phantoms, Imaging, Prospective Studies, Photons, Tomography, X-Ray Computed methods
- Abstract
Purpose: To prospectively compare the image quality of high-resolution, low-dose photon-counting detector CT (PCD-CT) with standard energy-integrating-detector CT (EID) on the same patients., Method: IRB-approved, prospective study; patients received same-day non-contrast CT on EID and PCD-CT (NAEOTOM Alpha, blinded) with clinical protocols. Four blinded radiologists evaluated subsegmental bronchial wall definition, noise, and overall image quality in randomized order (0 = worst; 100 = best). Cases were quantitatively compared using the average Global-Noise-Index (GNI), Noise-Power-Spectrum average frequency (f
av ), NPS frequency-peak (fpeak ), Task-Transfer-Function-10%-frequency (f10 ) an adjusted detectability index (d'adj ), and applied output radiation doses (CTDIvol )., Results: Sixty patients were prospectively imaged (27 men, mean age 67 ± 10 years, mean BMI 27.9 ± 6.5, 15.9-49.4 kg/m2 ). Subsegmental wall definition was rated significantly better for PCD-CT than EID (mean 71 [56-87] vs 60 [45-76]; P < 0.001), noise was rated higher for PCD-CT (48 [26-69] vs 34 [13-56]; P < 0.001). Overall image quality was rated significantly higher for PCD-CT than EID (66 [48-85] vs 61 [42-79], P = 0.008). Automated image quality measures showed similar differences for PCD-CT vs EID (mean GNI 70 ± 19 HU vs 26 ± 8 HU, fav 0.35 ± 0.02 vs 0.25 ± 0.02 mm-1 , fpeak 0.07 ± 0.01 vs 0.09 ± 0.03 mm-1 , f10 0.7 ± 0.08 vs 0.6 ± 0.1 mm-1 , all p-values < 0.001). PCD-CT showed a 10% average d'adj increase (-49% min, 233% max). PCD-CT studies were acquired at significantly lower radiation doses than EID (mean CTDIvol 4.5 ± 2.1 vs 7.7 ± 3.2 mGy, P < 0.01)., Conclusion: Though PCD-CT had higher measured and perceived noise, it offered equivalent or better diagnostic quality compared to EID at lower radiation doses, due to its improved resolution., Competing Interests: Declaration of Competing Interest Fides Schwartz declare speaking honoraria from Siemens Healthineers for educational presentations., (Copyright © 2023 Elsevier B.V. All rights reserved.)- Published
- 2023
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18. Determination of the Expressed T cell Repertoire: The Outcome of Competition at the Levels of Antigen Presentation and T cell Receptor Recognition
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Maverakis, E., Beech, J., Deng, H., Schneider, C., Van Den Elzen, P., Madakamutil, T., Ria, F., Moudgil, K., Kumar, V., Campagnoni, A., Sercarz, E. E., Eibl, Martha, editor, Mayr, W. R., editor, and Thorbecke, G. J., editor
- Published
- 2002
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19. Restricted T-Cell Repertoire in the Epicardial Adipose Tissue of Non-ST Segment Elevation Myocardial Infarction Patients
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Pedicino, Daniela, Severino, Anna, Di Sante, Gabriele, De Rosa, Maria Cristina, Pirolli, Davide, Vinci, Ramona, Pazzano, V., Giglio, A. F., Trotta, F., Russo, G., Ruggio, A., Pisano, Eugenia, D'Aiello, Alessia, Canonico, Francesco, Ciampi, P., Cianflone, D., Cianfanelli, L., Grimaldi, Maria Chiara, Filomia, Simone, Luciani, Nicola, Glieca, Franco, Bruno, Piergiorgio, Massetti, Massimo, Ria, Francesco, Crea, Filippo, Liuzzo, Giovanna, Pedicino D., Severino A., Di Sante G. (ORCID:0000-0001-6608-3388), De Rosa M. C., Pirolli D. (ORCID:0000-0003-2303-2577), Vinci R., Pisano E., d'Aiello A., Canonico F. (ORCID:0000-0001-6936-4548), Grimaldi M. C., Filomia S., Luciani N. (ORCID:0000-0002-9407-0303), Glieca F. (ORCID:0000-0003-3645-7152), Bruno P. (ORCID:0000-0002-1075-5808), Massetti M. (ORCID:0000-0002-7100-8478), Ria F. (ORCID:0000-0002-8444-0307), Crea F. (ORCID:0000-0001-9404-8846), Liuzzo G. (ORCID:0000-0002-5714-0907), Pedicino, Daniela, Severino, Anna, Di Sante, Gabriele, De Rosa, Maria Cristina, Pirolli, Davide, Vinci, Ramona, Pazzano, V., Giglio, A. F., Trotta, F., Russo, G., Ruggio, A., Pisano, Eugenia, D'Aiello, Alessia, Canonico, Francesco, Ciampi, P., Cianflone, D., Cianfanelli, L., Grimaldi, Maria Chiara, Filomia, Simone, Luciani, Nicola, Glieca, Franco, Bruno, Piergiorgio, Massetti, Massimo, Ria, Francesco, Crea, Filippo, Liuzzo, Giovanna, Pedicino D., Severino A., Di Sante G. (ORCID:0000-0001-6608-3388), De Rosa M. C., Pirolli D. (ORCID:0000-0003-2303-2577), Vinci R., Pisano E., d'Aiello A., Canonico F. (ORCID:0000-0001-6936-4548), Grimaldi M. C., Filomia S., Luciani N. (ORCID:0000-0002-9407-0303), Glieca F. (ORCID:0000-0003-3645-7152), Bruno P. (ORCID:0000-0002-1075-5808), Massetti M. (ORCID:0000-0002-7100-8478), Ria F. (ORCID:0000-0002-8444-0307), Crea F. (ORCID:0000-0001-9404-8846), and Liuzzo G. (ORCID:0000-0002-5714-0907)
- Abstract
Aims: Human epicardial adipose tissue, a dynamic source of multiple bioactive factors, holds a close functional and anatomic relationship with the epicardial coronary arteries and communicates with the coronary artery wall through paracrine and vasocrine secretions. We explored the hypothesis that T-cell recruitment into epicardial adipose tissue (EAT) in patients with non-ST segment elevation myocardial infarction (NSTEMI) could be part of a specific antigen-driven response implicated in acute coronary syndrome onset and progression. Methods and Results: We enrolled 32 NSTEMI patients and 34 chronic coronary syndrome (CCS) patients undergoing coronary artery bypass grafting (CABG) and 12 mitral valve disease (MVD) patients undergoing surgery. We performed EAT proteome profiling on pooled specimens from three NSTEMI and three CCS patients. We performed T-cell receptor (TCR) spectratyping and CDR3 sequencing in EAT and peripheral blood mononuclear cells of 29 NSTEMI, 31 CCS, and 12 MVD patients. We then used computational modeling studies to predict interactions of the TCR beta chain variable region (TRBV) and explore sequence alignments. The EAT proteome profiling displayed a higher content of pro-inflammatory molecules (CD31, CHI3L1, CRP, EMPRINN, ENG, IL-17, IL-33, MMP-9, MPO, NGAL, RBP-4, RETN, VDB) in NSTEMI as compared to CCS (P < 0.0001). CDR3-beta spectratyping showed a TRBV21 enrichment in EAT of NSTEMI (12/29 patients; 41%) as compared with CCS (1/31 patients; 3%) and MVD (none) (ANOVA for trend P < 0.001). Of note, 11/12 (92%) NSTEMI patients with TRBV21 perturbation were at their first manifestation of ACS. Four patients with the first event shared a distinctive TRBV21-CDR3 sequence of 178 bp length and 2/4 were carriers of the human leukocyte antigen (HLA)-A*03:01 allele. A 3D analysis predicted the most likely epitope able to bind HLA-A3*01 and interact with the TRBV21-CDR3 sequence of 178 bp length, while the alignment results were consistent wit
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- 2022
20. CSF CXCL13 and Chitinase 3-like-1 Levels Predict Disease Course in Relapsing Multiple Sclerosis
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Lucchini, Matteo, De Arcangelis, V., Piro, G., Nociti, Viviana, Bianco, Assunta, De Fino, Chiara, Di Sante, Gabriele, Ria, Francesco, Calabresi, Paolo, Mirabella, Massimiliano, Lucchini M. (ORCID:0000-0002-0447-2297), Nociti V. (ORCID:0000-0002-4607-3948), Bianco A., De Fino C., Di Sante G. (ORCID:0000-0001-6608-3388), Ria F. (ORCID:0000-0002-8444-0307), Calabresi P. (ORCID:0000-0003-0326-5509), Mirabella M. (ORCID:0000-0002-7783-114X), Lucchini, Matteo, De Arcangelis, V., Piro, G., Nociti, Viviana, Bianco, Assunta, De Fino, Chiara, Di Sante, Gabriele, Ria, Francesco, Calabresi, Paolo, Mirabella, Massimiliano, Lucchini M. (ORCID:0000-0002-0447-2297), Nociti V. (ORCID:0000-0002-4607-3948), Bianco A., De Fino C., Di Sante G. (ORCID:0000-0001-6608-3388), Ria F. (ORCID:0000-0002-8444-0307), Calabresi P. (ORCID:0000-0003-0326-5509), and Mirabella M. (ORCID:0000-0002-7783-114X)
- Abstract
Several biomarkers from multiple sclerosis (MS) patients' biological fluids have been considered to support diagnosis, predict disease course, and evaluate treatment response. In this study, we assessed the CSF concentration of selected molecules implicated in the MS pathological process. To investigate the diagnostic and prognostic significance of CSF concentration of target candidate biomarkers in both relapsing (RMS, n = 107) and progressive (PMS, n = 18) MS patients and in other inflammatory (OIND, n = 10) and non-inflammatory (ONIND, n = 15) neurological disorders. We measured the CSF concentration of APRIL, BAFF, CHI3L1, CCL-2, CXCL-8, CXCL-10, CXCL-12, CXCL-13 through a Luminex Assay. MS patients were prospectively evaluated, and clinical and radiological activity were recorded. CHI3L1 and CXCL13 CSF levels were significantly higher in both MS groups compared to control groups, while CCL2, BAFF, and APRIL concentrations were lower in RMS patients compared to PMS and OIND. Considering RMS patients with a single demyelinating event, higher concentrations of CHI3L1, CXCL10, CXCL12, and CXCL13 were recorded in patients who converted to clinically defined MS(CDMS). RMS patients in the CXCL13 and CHI3L1 high concentration group had a significantly higher risk of relapse (HR 12.61 and 4.57), MRI activity (HR 7.04 and 2.46), and of any evidence of disease activity (HR 12.13 and 2.90) during follow-up. CSF CXCL13 and CHI3L1 levels represent very good prognostic biomarkers in RMS patients, and therefore can be helpful in the treatment choice. Higher CSF concentrations of neuro-inflammatory biomarkers were associated with a higher risk of conversion to CDMS in patients with a first clinical demyelinating event. Differential CSF BAFF and APRIL levels between RMS and PMS suggest a different modulation of B-cells pathways in the different phases of the disease.
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- 2022
21. Recovering or Persisting: The Immunopathological Features of SARS-CoV-2 Infection in Children
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Buonsenso, Danilo, Valentini, Piero, De Rose, Cristina, Tredicine, Maria, Pereyra Boza, Maria Del Carmen, Camponeschi, C., Morello, Rosa, Zampino, Giuseppe, Brooks, A. E. S., Rende, M., Ria, Francesco, Sanguinetti, Maurizio, Delogu, Giovanni, Sali, Michela, Di Sante, Gabriele, Buonsenso D., Valentini P. (ORCID:0000-0001-6095-9510), De Rose C., Tredicine M., Pereyra Boza M. D. C., Morello R., Zampino G. (ORCID:0000-0003-3865-3253), Ria F. (ORCID:0000-0002-8444-0307), Sanguinetti M. (ORCID:0000-0002-9780-7059), Delogu G. (ORCID:0000-0003-0182-8267), Sali M. (ORCID:0000-0003-3609-2990), Di Sante G. (ORCID:0000-0001-6608-3388), Buonsenso, Danilo, Valentini, Piero, De Rose, Cristina, Tredicine, Maria, Pereyra Boza, Maria Del Carmen, Camponeschi, C., Morello, Rosa, Zampino, Giuseppe, Brooks, A. E. S., Rende, M., Ria, Francesco, Sanguinetti, Maurizio, Delogu, Giovanni, Sali, Michela, Di Sante, Gabriele, Buonsenso D., Valentini P. (ORCID:0000-0001-6095-9510), De Rose C., Tredicine M., Pereyra Boza M. D. C., Morello R., Zampino G. (ORCID:0000-0003-3865-3253), Ria F. (ORCID:0000-0002-8444-0307), Sanguinetti M. (ORCID:0000-0002-9780-7059), Delogu G. (ORCID:0000-0003-0182-8267), Sali M. (ORCID:0000-0003-3609-2990), and Di Sante G. (ORCID:0000-0001-6608-3388)
- Abstract
Background. The profile of cellular immunological responses of children across the spectrum of COVID-19, ranging from acute SARS-CoV-2 infection to full recovery or Long COVID, has not yet been fully investigated. Methods. We examined and compared cytokines in sera and cell subsets in peripheral blood mononuclear cells (B and regulatory T lymphocytes) collected from four distinct groups of children, distributed as follows: younger than 18 years of age with either acute SARS-CoV-2 infection (n = 49); fully recovered from COVID-19 (n = 32); with persistent symptoms (Long COVID, n = 51); and healthy controls (n = 9). Results. In the later stages after SARS-CoV-2 infection, the cohorts of children, both with recovered and persistent symptoms, showed skewed T and B subsets, with remarkable differences when compared with children at the onset of the infection and with controls. The frequencies of IgD+CD27− naïve B cells, IgD+IgM+ and CD27−IgM+CD38dim B cells were higher in children with recent infection than in those with an older history of disease (p < 0.0001 for all); similarly, the total and natural Tregs compartments were more represented in children at onset when compared with Long COVID (p < 0.0001 and p = 0.0005, respectively). Despite the heterogeneity, partially due to age, sex and infection incidence, the susceptibility of certain children to develop persistent symptoms after infection appeared to be associated with the imbalance of the adaptive immune response. Following up and comparing recovered versus Long COVID patients, we analyzed the role of circulating naïve and switched B and regulatory T lymphocytes in counteracting the evolution of the symptomatology emerged, finding an interesting correlation between the amount and ability to reconstitute the natural Tregs component with the persistence of symptoms (linear regression, p = 0.0026). Conclusions. In this study, we suggest that children affected by Long COVID may have a compromised ability to s
- Published
- 2022
22. Fighting autoinflammation in FIRES: The role of interleukins and early immunomodulation
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Perulli, Marco, Cicala, Gianpaolo, Turrini, Ida, Musto, Elisa, Quintiliani, Michela, Gambardella, Maria Luigia, Pulitano', Silvia Maria, Bompard, S., Staccioli, S., Carmillo, L., Di Sante, Gabriele, Ria, Francesco, Veredice, Chiara, Contaldo, Ilaria, Battaglia, Domenica Immacolata, Perulli M., Cicala G., Turrini I., Musto E., Quintiliani M., Gambardella M. L., Pulitano S. M. (ORCID:0000-0002-8496-379X), Di Sante G. (ORCID:0000-0001-6608-3388), Ria F. (ORCID:0000-0002-8444-0307), Veredice C., Contaldo I., Battaglia D. (ORCID:0000-0003-0491-4021), Perulli, Marco, Cicala, Gianpaolo, Turrini, Ida, Musto, Elisa, Quintiliani, Michela, Gambardella, Maria Luigia, Pulitano', Silvia Maria, Bompard, S., Staccioli, S., Carmillo, L., Di Sante, Gabriele, Ria, Francesco, Veredice, Chiara, Contaldo, Ilaria, Battaglia, Domenica Immacolata, Perulli M., Cicala G., Turrini I., Musto E., Quintiliani M., Gambardella M. L., Pulitano S. M. (ORCID:0000-0002-8496-379X), Di Sante G. (ORCID:0000-0001-6608-3388), Ria F. (ORCID:0000-0002-8444-0307), Veredice C., Contaldo I., and Battaglia D. (ORCID:0000-0003-0491-4021)
- Abstract
Febrile infection-related epilepsy syndrome (FIRES) is a challenging condition with unfavorable outcome in most cases. Preliminary evidence suggests that some interleukins, in particular IL-1 Receptor Antagonist (IL-1RA), could be elevated due to a functional deficiency of anti-inflammatory pathways. Therefore, treatment strategies acting on innate immunity could represent a targeted treatment. We describe the case of an 11-year-old child with super-refractory status epilepticus (SE), lasting more than two months. After being treated aggressively with antiseizure medications, anesthetics and empiric treatment for autoimmune encephalitis without success, she responded to anakinra and ketogenic diet. Escalation of the therapy was supported by the finding of a very high serum level of IL-1RA. This immunomodulatory approach allowed to discharge the child from intensive care 48 days after the SE onset. After more than one year follow-up the patient has moderate intellectual disability but with good language skills; she is seizure free and without motor deficits. This case suggests that serum IL-1RA serum levels may help to support treatment escalation. Moreover, anakinra and ketogenic diet represent encouraging immunomodulatory strategies which deserve further studies and could potentially have a synergistic effect. Finally, structured neuropsychological testing is an important outcome measure that will help to define the effectiveness of different treatment strategies.
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- 2022
23. Prediction of CD44 Structure by Deep Learning-Based Protein Modeling.
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Camponeschi C, Righino B, Pirolli D, Semeraro A, Ria F, and De Rosa MC
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- Carrier Proteins metabolism, Deep Learning, Extracellular Matrix metabolism, Hyaluronic Acid chemistry, Molecular Dynamics Simulation, Receptors, Cell Surface metabolism, Humans, Animals, Hyaluronan Receptors chemistry, Hyaluronan Receptors metabolism
- Abstract
CD44 is a cell surface glycoprotein transmembrane receptor that is involved in cell-cell and cell-matrix interactions. It crucially associates with several molecules composing the extracellular matrix, the main one of which is hyaluronic acid. It is ubiquitously expressed in various types of cells and is involved in the regulation of important signaling pathways, thus playing a key role in several physiological and pathological processes. Structural information about CD44 is, therefore, fundamental for understanding the mechanism of action of this receptor and developing effective treatments against its aberrant expression and dysregulation frequently associated with pathological conditions. To date, only the structure of the hyaluronan-binding domain (HABD) of CD44 has been experimentally determined. To elucidate the nature of CD44s, the most frequently expressed isoform, we employed the recently developed deep-learning-based tools D-I-TASSER, AlphaFold2, and RoseTTAFold for an initial structural prediction of the full-length receptor, accompanied by molecular dynamics simulations on the most promising model. All three approaches correctly predicted the HABD, with AlphaFold2 outperforming D-I-TASSER and RoseTTAFold in the structural comparison with the crystallographic HABD structure and confidence in predicting the transmembrane helix. Low confidence regions were also predicted, which largely corresponded to the disordered regions of CD44s. These regions allow the receptor to perform its unconventional activity.
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- 2023
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24. Ablative robotic radiosurgery for inoperable patients with stage IA–IB non small cell lung cancer: 102P
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Zanetti, Bossi I., Scanagatta, P., Bianchi, L. C., Bergantin, A., Martinotti, A. S., Redaelli, I., Ria, F., Vai, A., Invernizzi, M., and Beltramo, G.
- Published
- 2016
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25. Immune regulatory and neuroprotective properties of preimplantation factor: From newborn to adult
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Barnea, E. R., Almogi-Hazan, O., Or, R., Mueller, M., Ria, F., Weiss, L., and Paidas, M. J.
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- 2015
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26. HLA-DRB1 haplotype associates with selection of lipid transfer protein variants as targets of food allergy
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Nucera, E, Valentini, M, Mezzacappa, S, Migliara, G, Chini, R, Rizzi, A, Aruanno, A, Ria, F, Nucera, E (ORCID:0000-0002-0565-7680), Rizzi, A (ORCID:0000-0002-6795-746X), Ria, F (ORCID:0000-0002-8444-0307), Nucera, E, Valentini, M, Mezzacappa, S, Migliara, G, Chini, R, Rizzi, A, Aruanno, A, Ria, F, Nucera, E (ORCID:0000-0002-0565-7680), Rizzi, A (ORCID:0000-0002-6795-746X), and Ria, F (ORCID:0000-0002-8444-0307)
- Abstract
N/A
- Published
- 2019
27. The S100B Protein: A Multifaceted Pathogenic Factor More Than a Biomarker.
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Michetti F, Clementi ME, Di Liddo R, Valeriani F, Ria F, Rende M, Di Sante G, and Romano Spica V
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- Humans, Biomarkers metabolism, Nervous System Diseases, Parkinson Disease metabolism, S100 Calcium Binding Protein beta Subunit
- Abstract
S100B is a calcium-binding protein mainly concentrated in astrocytes in the nervous system. Its levels in biological fluids are recognized as a reliable biomarker of active neural distress, and more recently, mounting evidence points to S100B as a Damage-Associated Molecular Pattern molecule, which, at high concentration, triggers tissue reactions to damage. S100B levels and/or distribution in the nervous tissue of patients and/or experimental models of different neural disorders, for which the protein is used as a biomarker, are directly related to the progress of the disease. In addition, in experimental models of diseases such as Alzheimer's and Parkinson's diseases, amyotrophic lateral sclerosis, multiple sclerosis, traumatic and vascular acute neural injury, epilepsy, and inflammatory bowel disease, alteration of S100B levels correlates with the occurrence of clinical and/or toxic parameters. In general, overexpression/administration of S100B worsens the clinical presentation, whereas deletion/inactivation of the protein contributes to the amelioration of the symptoms. Thus, the S100B protein may be proposed as a common pathogenic factor in different disorders, sharing different symptoms and etiologies but appearing to share some common pathogenic processes reasonably attributable to neuroinflammation.
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- 2023
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28. Therapeutic Strategies to Prevent the Recurrence of Nasal Polyps after Surgical Treatment: An Update and In Vitro Study on Growth Inhibition of Fibroblasts.
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Rizzi A, Gammeri L, Cordiano R, Valentini M, Centrone M, Marrone S, Inchingolo R, Lohmeyer FM, Cavaliere C, Ria F, Cadoni G, Gangemi S, and Nucera E
- Abstract
Chronic rhinosinusitis with nasal polyps (CRSwNP) is the most bothersome phenotype of chronic rhinosinusitis, which is typically characterized by a Type 2 inflammatory reaction, comorbidities and high rates of nasal polyp recurrence, causing severe impact on quality of life. Nasal polyp recurrence rates, defined as the number of patients undergoing revision endoscopic sinus surgery, are 20% within a 5 year period after surgery. The cornerstone of CRSwNP management consists of anti-inflammatory treatment with local corticosteroids. We performed a literature review regarding the therapeutic strategies used to prevent nasal polyp recurrence after surgical treatment. Finally, we report an in vitro study evaluating the efficacy of lysine-acetylsalicylic acid and other non-steroidal anti-inflammatory drugs (ketoprofen and diclofenac) on the proliferation of fibroblasts, obtained from nasal polyp tissue samples. Our study demonstrates that diclofenac, even more so than lysine-acetylsalicylic acid, significantly inhibits fibroblast proliferation and could be considered a valid therapeutic strategy in preventing CRSwNP recurrence.
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- 2023
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29. Making CT Dose Monitoring Meaningful: Augmenting Dose with Imaging Quality.
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Alsaihati N, Ria F, Solomon J, Ding A, Frush D, and Samei E
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- Humans, Radiation Dosage, Tomography, X-Ray Computed methods, Radiology
- Abstract
Due to the concerns about radiation dose associated with medical imaging, radiation dose monitoring systems (RDMSs) are now utilized by many radiology providers to collect, process, analyze, and manage radiation dose-related information. Currently, most commercially available RDMSs focus only on radiation dose information and do not track any metrics related to image quality. However, to enable comprehensive patient-based imaging optimization, it is equally important to monitor image quality as well. This article describes how RDMS design can be extended beyond radiation dose to simultaneously monitor image quality. A newly designed interface was evaluated by different groups of radiology professionals (radiologists, technologists, and physicists) on a Likert scale. The results show that the new design is effective in assessing both image quality and safety in clinical practices, with an overall average score of 7.8 out of 10.0 and scores ranging from 5.5 to 10.0. Radiologists rated the interface highest at 8.4 out of 10.0, followed by technologists at 7.6 out of 10.0, and medical physicists at 7.5 out of 10.0. This work demonstrates how the assessment of the radiation dose can be performed in conjunction with the image quality using customizable user interfaces based on the clinical needs associated with different radiology professions.
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- 2023
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30. S100B Expression Plays a Crucial Role in Cytotoxicity, Reactive Oxygen Species Generation and Nitric Oxide Synthase Activation Induced by Amyloid β-Protein in an Astrocytoma Cell Line.
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Clementi ME, Sampaolese B, Di Sante G, Ria F, Di Liddo R, Romano Spica V, and Michetti F
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- Humans, Reactive Oxygen Species metabolism, S100 Calcium Binding Protein beta Subunit genetics, S100 Calcium Binding Protein beta Subunit metabolism, Nerve Growth Factors metabolism, Cell Line, Nitric Oxide Synthase metabolism, Astrocytes metabolism, Nitric Oxide metabolism, Amyloid beta-Peptides metabolism, Astrocytoma genetics, Astrocytoma metabolism
- Abstract
S100B is an astrocytic cytokine that has been shown to be involved in several neurodegenerative diseases. We used an astrocytoma cell line (U373 MG) silenced for S100B, and stimulated it with amyloid beta-peptide (Aβ) as a known paradigm factor for astrocyte activation, and showed that the ability of the cell (including the gene machinery) to express S100B is a prerequisite for inducing reactive astrocytic features, such as ROS generation, NOS activation and cytotoxicity. Our results showed that control astrocytoma cell line exhibited overexpression of S100B after Aβ treatment, and subsequently cytotoxicity, increased ROS generation and NOS activation. In contrast, cells silenced with S100B were essentially protected, consistently reducing cell death, significantly decreasing oxygen radical generation and nitric oxide synthase activity. The conclusive aim of the present study was to show a causative linkage between the cell expression of S100B and induction of astrocyte activation processes, such as cytotoxicity, ROS and NOS activation.
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- 2023
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31. Study of the effects of Lemna minor extracts on human immune cell populations
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Catelani Cardoso, C., Miraldi, E., Ceccarini, M. R., Naureen, Z., Baini, G., Manara, E., Anpilogov, K., Camilleri, G., Dhuli, K., Paolacci, S., Ria, Francesco, Di Sante, Gabriele, Camponeschi, C., Tredicine, Maria, Zanlari, A., Chiurazzi, Pietro, Beccari, T., Bertelli, M., Ria F. (ORCID:0000-0002-8444-0307), Di Sante G. (ORCID:0000-0001-6608-3388), Tredicine M., Chiurazzi P. (ORCID:0000-0001-5104-1521), Catelani Cardoso, C., Miraldi, E., Ceccarini, M. R., Naureen, Z., Baini, G., Manara, E., Anpilogov, K., Camilleri, G., Dhuli, K., Paolacci, S., Ria, Francesco, Di Sante, Gabriele, Camponeschi, C., Tredicine, Maria, Zanlari, A., Chiurazzi, Pietro, Beccari, T., Bertelli, M., Ria F. (ORCID:0000-0002-8444-0307), Di Sante G. (ORCID:0000-0001-6608-3388), Tredicine M., and Chiurazzi P. (ORCID:0000-0001-5104-1521)
- Abstract
OBJECTIVE: Lemna minor is a plant with a huge repertoire of secondary metabolites. The literature indicates that extracts of Lemna minor have antioxidant, antiradical, immunomodulatory and anti-inflammatory properties. The objective of the present study was to find a suitable technique to extract active compounds from this plant and verify whether these extracts have immunomodulatory activity. MATERIALS AND METHODS: We grew L. minor on a standard medium with Gamborg B5 and vitamins. We extracted compounds from the plant by maceration and decoction. The phytochemical profile of the extracts was characterized by chromatography, spectrophotometry, and spectroscopy. The extracts were tested on cultures of mononuclear cells from four human subjects. These cells were pulsed with carboxyfluorescein succinimidyl ester, grown in triplicate in standard culture medium without (control) and with increasing concentrations of Lemna extracts. Flow cytometry was used to evaluate cell death and proliferation of the total mononuclear cell population and of CD4+, CD8+, B cell and monocyte populations. RESULTS: The Lemna extracts were not cytotoxic and did not cause cell necrosis or apoptosis in immune cells. At low concentrations, they induced very limited proliferation of CD4+ cells within 48 hours. At high concentrations, they induced proliferation of CD8+ cells and B lymphocytes within 48 hours. CONCLUSIONS: Unfortunately, we failed to confirm any immunomodulatory activity of Lemna extracts. Growth and death rates of human immune cells were not significantly affected by adding Lemna extracts to the culture medium.
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- 2021
32. S100B protein as a therapeutic target in multiple sclerosis: The S100B inhibitor arundic acid protects from chronic experimental autoimmune encephalomyelitis
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Camponeschi, C., De Carluccio, M., Amadio, S., Clementi, Maria Elisabetta, Sampaolese, B., Volonte, C., Tredicine, Maria, Spica, V. R., Di Liddo, R., Ria, Francesco, Michetti, Fabrizio, Di Sante, Gabriele, Clementi M. E., Tredicine M., Ria F. (ORCID:0000-0002-8444-0307), Michetti F. (ORCID:0000-0003-2546-0532), Di Sante G. (ORCID:0000-0001-6608-3388), Camponeschi, C., De Carluccio, M., Amadio, S., Clementi, Maria Elisabetta, Sampaolese, B., Volonte, C., Tredicine, Maria, Spica, V. R., Di Liddo, R., Ria, Francesco, Michetti, Fabrizio, Di Sante, Gabriele, Clementi M. E., Tredicine M., Ria F. (ORCID:0000-0002-8444-0307), Michetti F. (ORCID:0000-0003-2546-0532), and Di Sante G. (ORCID:0000-0001-6608-3388)
- Abstract
S100B is an astrocytic protein behaving at high concentration as a damage-associated molecular pattern molecule. A direct correlation between the increased amount of S100B and inflammatory processes has been demonstrated, and in particular, the inhibitor of S100B activity pentamidine has been shown to ameliorate clinical scores and neuropathologic-biomolecular parameters in the relapsing-remitting experimental autoimmune encephalomyelitis mouse model of multiple sclerosis. This study investigates the effect of arundic acid (AA), a known inhibitor of astrocytic S100B synthesis, in the chronic experimental autoimmune encephalomyelitis, which is another mouse model of multiple sclerosis usually studied. By the daily evaluation of clinical scores and neuropathologic-molecular analysis performed in the spinal cord, we observed that the AA-treated group showed lower severity compared to the vehicle-treated mice, particularly in the early phase of disease onset. We also observed a significant reduction of astrocytosis, demyelination, immune infiltrates, proinflammatory cytokines expression and enzymatic oxidative reactivity in the AA-treated group. Overall, our results reinforce the involvement of S100B in the development of animal models of multiple sclerosis and propose AA targeting the S100B protein as a focused potential drug to be considered for multiple sclerosis treatment.
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- 2021
33. SMA-miRs (MiR-181a- 5p, -324-5p, and -451a) are overexpressed in spinal muscular atrophy skeletal muscle and serum samples
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Abiusi, Emanuela, Infante, P., Cagnoli, C., Severini, L. L., Pane, Marika, Coratti, Giorgia, Pera, Maria Carmela, D'Amico, Adele, Diano, Federica, Novelli, Agnese, Spartano, Serena, Fiori, Simona, Baranello, Giovanni, Moroni, I., Mora, M., Pasanisi, M. B., Pocino, Krizia, Le Pera, L., D'Amico, D., Travaglini, L., Ria, Francesco, Bruno, C., Locatelli, D., Bertini, Enrico Silvio, Morandi, L. O., Mercuri, Eugenio Maria, Di Marcotullio, L., Tiziano, Francesco Danilo, Abiusi E. (ORCID:0000-0001-9028-012X), Pane M. (ORCID:0000-0002-4851-6124), Coratti G. (ORCID:0000-0001-6666-5628), Pera M. C. (ORCID:0000-0001-6777-1721), D'amico A., Diano F., Novelli A., Spartano S., Fiori S., Baranello G., Pocino K. (ORCID:0000-0003-2456-5308), Ria F. (ORCID:0000-0002-8444-0307), Bertini E. S., Mercuri E. (ORCID:0000-0002-9851-5365), Tiziano F. D. (ORCID:0000-0002-5545-6158), Abiusi, Emanuela, Infante, P., Cagnoli, C., Severini, L. L., Pane, Marika, Coratti, Giorgia, Pera, Maria Carmela, D'Amico, Adele, Diano, Federica, Novelli, Agnese, Spartano, Serena, Fiori, Simona, Baranello, Giovanni, Moroni, I., Mora, M., Pasanisi, M. B., Pocino, Krizia, Le Pera, L., D'Amico, D., Travaglini, L., Ria, Francesco, Bruno, C., Locatelli, D., Bertini, Enrico Silvio, Morandi, L. O., Mercuri, Eugenio Maria, Di Marcotullio, L., Tiziano, Francesco Danilo, Abiusi E. (ORCID:0000-0001-9028-012X), Pane M. (ORCID:0000-0002-4851-6124), Coratti G. (ORCID:0000-0001-6666-5628), Pera M. C. (ORCID:0000-0001-6777-1721), D'amico A., Diano F., Novelli A., Spartano S., Fiori S., Baranello G., Pocino K. (ORCID:0000-0003-2456-5308), Ria F. (ORCID:0000-0002-8444-0307), Bertini E. S., Mercuri E. (ORCID:0000-0002-9851-5365), and Tiziano F. D. (ORCID:0000-0002-5545-6158)
- Abstract
Background: Spinal muscular atrophy (SMA) is a neuromuscular disorder characterized by the degeneration of the second motor neuron. The phenotype ranges from very severe to very mild forms. All patients have the homozygous loss of the SMN1 gene and a variable number of SMN2 (generally 2–4 copies), inversely related to the severity. The amazing results of the available treatments have made compelling the need of prognostic biomarkers to predict the progression trajectories of patients. Besides the SMN2 products, few other biomarkers have been evaluated so far, including some miRs. Methods: We performed whole miRNome analysis of muscle samples of patients and controls (14 biopsies and 9 cultures). The levels of muscle differentially expressed miRs were evaluated in serum samples (51 patients and 37 controls) and integrated with SMN2 copies, SMN2 full-length transcript levels in blood and age (SMA-score). Results: Over 100 miRs were differentially expressed in SMA muscle; 3 of them (hsa-miR-181a-5p, -324-5p, -451a; SMA-miRs) were significantly upregulated in the serum of patients. The severity predicted by the SMA-score was related to that of the clinical classification at a correlation coefficient of 0.87 (p<10-5). Conclusions: MiRNome analyses suggest the primary involvement of skeletal muscle in SMA pathogenesis. The SMA-miRs are likely actively released in the blood flow; their function and target cells require to be elucidated. The accuracy of the SMA-score needs to be verified in replicative studies: If confirmed, its use could be crucial for the routine prognostic assessment, also in presymptomatic patients.
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- 2021
34. Sinningia stapelioides Chautems & M. Peixoto 2019, spec. nova
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Chautems, Alain, Valqu��ria F. Dutra, Fontana, Andr�� P., Peixoto, Mauro, Perret, Mathieu, and Rossini, Josiene
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Tracheophyta ,Magnoliopsida ,Sinningia stapelioides ,Sinningia ,Biodiversity ,Gesneriaceae ,Plantae ,Taxonomy ,Lamiales - Abstract
Sinningia stapelioides Chautems & M. Peixoto, spec. nova (Fig. 2D, 5). Holotypus: [BRAZIL. Esp��rito Santo]: cult. in CJBG under Acc. n�� AC-3518 originating from Pancas, Pedra da Agulha, 17.I.2012, fl., A. Chautems 555 (VIES!; iso-: G spirit!). Sinningia stapelioides resembles S. defoliata (Malme) Chautems, S. helioana Chautems & Rossini and S. tuberosa (Mart.) H.E. Moore in having inflorescences and leaves arising separately and successively from the tuber with rarely more than one leaf blade produced by a petiole-like stem. It differs however by a pauciflorous inflorescence with distinctive flowers having a large (5���6 cm) tubular-campanulate corolla, dull red orange outside with a peculiar throat that is greenishcream with a dense network of vinaceous streaks that extends on the inner face of the lobes (vs long, up to 3���4 cm, tubular and bright red corollas). Herb, arising from perennial tuber, saxicolous; tuber spheroidal, 4���12 cm in diam., leaves and inflorescences produced separately and successively, 1- rarely 2-petiole-like stems, obliquely arising from the tuber upper surface, 4���12 cm long, 3���4 mm in diam., vinaceous, pubescent, blade attachment swollen abaxially, 1���2 pairs of linear-lanceolate bracts just below blade insertion. Leaves forming an angle of nearly 90�� with the petiole-like stem, usually reduced to one large blade at maturity (during first growing cycle from seed seedlings produce 2���3 pairs of opposite leaves, followed on subsequent growing cycles from tuber by a phase with a second and small leaf blade, 1���5 mm long, produced in opposite position), ovate (3���)9���24 (��� 36) �� (1���)4���11(��� 18) cm, apex acute-acuminate, base shortly attenuate to truncate, green above, green or reddish beneath, finely puberulous-velutinous, margin slightly crenate, 10���15 pairs of veins. Inflorescences organized in well-developed pairflowered cymes of 1���3 flowers borne on a peduncle, 5���8 cm long, 1���2 mm in diam., greenish to vinaceous, emerging from 1���2 points of the tuber upper surface, bracts linear, 1���2 mm long. Flowers nodding, borne on pedicels, 2���4 cm long, greenish to vinaceous, puberulous. Calyx campanulate, sepals fused at base for 2��� 3 mm, narrowly triangular, 13���15 �� 6��� 7 mm, wide at base, greenish to reddish, margin entire, puberulous. Corolla slightly oblique in the calyx, tubular, 5��� 6 cm long, nectary chamber composed of 5 swellings, green, 9���10 mm wide at base, tube enlarged then towards the middle reaching 16���20 mm in diam., vinaceous in bud, dull red orange outside (RHS color chart # 35 B-C) at maturity, puberulous with simple and glandular trichomes, lobes 9���10 �� 18���20 mm, throat cream to greenish towards bottom, lobes spreading with a network of vinaceous streaks and dots on inner face. Stamens 4, included, filaments ca. 50 mm, greenish, glabrous, anthers coherent, star-shaped, pollen cream; nectary formed of five glands, equals in size, greenish; ovary vinaceous, style included, 40��� 50 mm long, vinaceous, puberulent, stigma greenish. Fruit a capsule, subulate at the apex, dark brown at maturity, 14���18 �� 9���11 mm, seeds ellipsoid, 7���9 mm long. Etymology. ��� The specific epithet refers to the color pattern of the corolla that resembles flowers of some members of the genus Stapelia L. (Apocynaceae). Distribution and ecology. ��� Only known so far from the type locality in the region of the ���Pont��es Capixabas���, an area classified as National Monument around the small town of Pancas, in the northern part of the state of Esp��rito Santo, Brazil (Fig. 1). The area is famous for large rock inselbergs, some reaching several hundred meters in height. A few tubers were observed growing on a vertical side of a granite block measuring ca. 5 m in height in shady situation, not far from a forested fragment partially converted to cocoa trees cultivation, within a small farm. Phenology. ��� Flowers observed in August (in cultivation in Brazil) or December (in cultivation in Geneva) and mature fruits in October (in cultivation in Brazil). Conservation status. ��� Less than ten individuals were observed in a single population growing on a large granitic block within a fragment of humid forest, with the understory partly planted with cocoa trees. This single location lies within a farm at a few hundred meters from the farmer residence. Most of the land is already converted to tropical crops, like banana and coffee. This reduced plant population is then heavily threatened by any change in the surroundings, like tree felling or extension of any other tropical crop. With an EOO S. stapelioides is assigned a preliminary assessment as ���Critically Endangered��� [CR B2ab(iii)] using the IUCN Red List (IUCN, 2012). Notes. ��� This species generates leaves and inflorescences separately and successively on the tuber surface, following the tuber dormancy period during the dry season (May-September). This feature is also present in three other Sinningia species, i.e., S. defoliata (Malme) Chautems, S. helioana and S. tuberosa (Mart.) H. E. Moore. This separate and successive development of vegetative and fertile shoots could have evolved at least twice independently in the genus. Indeed, preliminary phylogenetic data place this new taxon in the clade Corytholoma, together with S. defoliata and S. helioana, whereas S. tuberosa belongs to clade Sinningia (PERRET et al. 2003; M. Perret, unpubl. data). Nevertheless, S. stapelioides produces large (5���6 cm) tubular-campanulate corollas with a peculiar throat and lobes coloration pattern that differ from the long (up to 3���4 cm) tubular and bright red corollas displayed by these three species. Live material of this species was first obtained from the late R. A. Kautsky (later established to have been originally collected in the type locality within Sr. Adriano Romais��� property). It was introduced in cultivation under the provisional name Sinningia sp. ���Pancas���. The only available material collected in the wild is a sterile gathering, as all individuals at the time of the collection were in a vegetative phase. This sample is designated as a paratype. Fertile material could only be observed at a different period on a plant cultivated in Geneva originating from the same locality. A flower was then collected and designated here as the holotype. Paratypus. ��� BRAZIL. Esp��rito Santo: Pancas, base da Pedra da Agulha, propri��t�� do Sr. Adriano Romais, 4. V.2012, ster., Perret, Chautems, Peixoto & Duarte 55 (VIES-026563)., Published as part of Chautems, Alain, Valqu��ria F. Dutra,, Fontana, Andr�� P., Peixoto, Mauro, Perret, Mathieu & Rossini, Josiene, 2019, Three new species of Sinningia (Gesneriaceae) endemic to Esp��rito Santo, Brazil, pp. 33-42 in Candollea 74 (1) on pages 39-41, DOI: 10.15553/c2019v741a5, http://zenodo.org/record/3404226, {"references":["IUCN (2012). IUCN Red List Categories and Criteria: Version 3.1 ed. 2. IUCN Species Survival Commission, IUCN, Gland & Cambridge.","PERRET M., A. CHAUTEMS, R. SPICHIGER, G. KITE & V. SAVOLAINEN (2003). Systematics and evolution of tribe Sinningieae (Gesneriaceae): Evidence from phylogenetic analyses of six plastid DNA regions and nuclear ncpGS. Am. J. Bot. 90: 445 - 460."]}
- Published
- 2019
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35. Publisher Correction: Virtual screening and molecular dynamics simulations provide insight into repurposing drugs against SARS-CoV-2 variants Spike protein/ACE2 interface.
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Pirolli D, Righino B, Camponeschi C, Ria F, Di Sante G, and De Rosa MC
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- 2023
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36. Virtual screening and molecular dynamics simulations provide insight into repurposing drugs against SARS-CoV-2 variants Spike protein/ACE2 interface.
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Pirolli D, Righino B, Camponeschi C, Ria F, Di Sante G, and De Rosa MC
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- Humans, Angiotensin-Converting Enzyme 2, Drug Repositioning, Molecular Docking Simulation, SARS-CoV-2, Spike Glycoprotein, Coronavirus, Protein Binding, Molecular Dynamics Simulation, COVID-19
- Abstract
After over two years of living with Covid-19 and hundreds of million cases worldwide there is still an unmet need to find proper treatments for the novel coronavirus, due also to the rapid mutation of its genome. In this context, a drug repositioning study has been performed, using in silico tools targeting Delta Spike protein/ACE2 interface. To this aim, it has been virtually screened a library composed by 4388 approved drugs through a deep learning-based QSAR model to identify protein-protein interactions modulators for molecular docking against Spike receptor binding domain (RBD). Binding energies of predicted complexes were calculated by Molecular Mechanics/Generalized Born Surface Area from docking and molecular dynamics simulations. Four out of the top twenty ranking compounds showed stable binding modes on Delta Spike RBD and were evaluated also for their effectiveness against Omicron. Among them an antihistaminic drug, fexofenadine, revealed very low binding energy, stable complex, and interesting interactions with Delta Spike RBD. Several antihistaminic drugs were found to exhibit direct antiviral activity against SARS-CoV-2 in vitro, and their mechanisms of action is still debated. This study not only highlights the potential of our computational methodology for a rapid screening of variant-specific drugs, but also represents a further tool for investigating properties and mechanisms of selected drugs., (© 2023. The Author(s).)
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- 2023
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37. S100B Affects Gut Microbiota Biodiversity.
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Romano Spica V, Valeriani F, Orsini M, Clementi ME, Seguella L, Gianfranceschi G, Di Liddo R, Di Sante G, Ubaldi F, Ria F, Esposito G, and Michetti F
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- Mice, Animals, Pentamidine pharmacology, Biodiversity, RNA, Ribosomal, 16S genetics, S100 Calcium Binding Protein beta Subunit, Gastrointestinal Microbiome, Microbiota
- Abstract
This in vivo study in mice addresses the relationship between the biodiversity of the microbiota and the levels of S100B, a protein present in enteroglial cells, but also in foods such as milk. A positive significant correlation was observed between S100B levels and Shannon values, which was reduced after treatment with Pentamidine, an inhibitor of S100B function, indicating that the correlation was influenced by the modulation of S100B activity. Using the bootstrap average method based on the distribution of the S100B concentration, three groups were identified, exhibiting a significant difference between the microbial profiles. Operational taxonomic units, when analyzed by SIMPER analysis, showed that genera regarded to be eubiotic were mainly concentrated in the intermediate group, while genera potentially harboring pathobionts often appeared to be more concentrated in groups where the S100B amounts were very low or high. Finally, in a pilot experiment, S100B was administered orally, and the microbial profiles appeared to be modified accordingly. These data may open novel perspectives involving the possibility of S100B-mediated regulation in the intestinal microbiota.
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- 2023
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38. Regionally restricted modulation of Sam68 expression and Arhgef9 alternative splicing in the hippocampus of a murine model of multiple sclerosis.
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Adinolfi A, Di Sante G, Rivignani Vaccari L, Tredicine M, Ria F, Bonvissuto D, Corvino V, Sette C, and Geloso MC
- Abstract
Multiple sclerosis (MS) and its preclinical models are characterized by marked changes in neuroplasticity, including excitatory/inhibitory imbalance and synaptic dysfunction that are believed to underlie the progressive cognitive impairment (CI), which represents a significant clinical hallmark of the disease. In this study, we investigated several parameters of neuroplasticity in the hippocampus of the experimental autoimmune encephalomyelitis (EAE) SJL/J mouse model, characterized by rostral inflammatory and demyelinating lesions similar to Relapsing-Remitting MS. By combining morphological and molecular analyses, we found that the hippocampus undergoes extensive inflammation in EAE-mice, more pronounced in the CA3 and dentate gyrus (DG) subfields than in the CA1, associated with changes in GABAergic circuitry, as indicated by the increased expression of the interneuron marker Parvalbumin selectively in CA3. By laser-microdissection, we investigated the impact of EAE on the alternative splicing of Arhgef9 , a gene encoding a post-synaptic protein playing an essential role in GABAergic synapses and whose mutations have been related to CI and epilepsy. Our results indicate that EAE induces a specific increase in inclusion of the alternative exon 11a only in the CA3 and DG subfields, in line with the higher local levels of inflammation. Consistently, we found a region-specific downregulation of Sam68, a splicing-factor that represses this splicing event. Collectively, our findings confirm a regionalized distribution of inflammation in the hippocampus of EAE-mice. Moreover, since neuronal circuit rearrangement and dynamic remodeling of structural components of the synapse are key processes that contribute to neuroplasticity, our study suggests potential new molecular players involved in EAE-induced hippocampal dysfunction., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Adinolfi, Di Sante, Rivignani Vaccari, Tredicine, Ria, Bonvissuto, Corvino, Sette and Geloso.)
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- 2023
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39. In Vitro and Ex Vivo Methodologies for T-Cell Trafficking Through Blood-Brain Barrier After TLR Activation.
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Moliterni C, Tredicine M, Pistilli A, Falcicchia R, Bartolini D, Stabile AM, Rende M, Ria F, and Di Sante G
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- Humans, Animals, Mice, Protein Transport, Cell Culture Techniques, Cell Movement, Blood-Brain Barrier, T-Lymphocytes
- Abstract
This chapter describes ex vivo isolation of human T cells and of naïve splenocytes respectively collected from multiple sclerosis patients and healthy controls and experimental autoimmune encephalomyelitis-affected mice. After the magnetic sorting of naïve and activated T helper lymphocytes, we provide details about the cell cultures to measure the interaction with extracellular matrix proteins using standard cell invasion or hand-made in vitro assays, upon different stimuli, through Toll-like receptor(s) ligands, T-cell activators, and cell adhesion molecules modulators. Finally, we describe the methods to harvest and recover T cells to evaluate the properties associated with their trafficking ability., (© 2023. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.)
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- 2023
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40. Liposome-based nanoparticles impact on regulatory and effector phenotypes of macrophages and T cells in multiple Sclerosis patients.
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Tredicine M, Ria F, Poerio N, Lucchini M, Bianco A, De Santis F, Valentini M, De Arcangelis V, Rende M, Stabile AM, Pistilli A, Camponeschi C, Nociti V, Mirabella M, Fraziano M, and Di Sante G
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- Humans, Liposomes metabolism, Phosphatidylserines, Macrophages metabolism, Phenotype, Multiple Sclerosis drug therapy, Nanoparticles
- Abstract
Current available treatments of Multiple Sclerosis (MS) reduce neuroinflammation acting on different targets on the immune system, but potentially lead to severe side effects and have a limited efficacy in slowing the progression of the disease. Here, we evaluated in vitro the immunomodulatory potential of a new class of nanoparticles - liposomes, constituted by a double-layer of phosphatidylserine (PSCho/PS), and double-faced, with an outer layer of phosphatidylserine and an inner layer of phosphatidic acid (PSCho/PA), either alone or in the presence of the myelin basic protein (MBP) peptide (residues 85-99) (PSCho/PS-MBP and PSCho/PA-MBP). Results showed that PSCho/PS are equally and efficiently internalized by pro- and anti-inflammatory macrophages (M1 and M2 respectively), while PSCho/PA were internalized better by M2 than M1. PSCho/PS liposomes were able to inhibit the secretion of innate pro-inflammatory cytokine IL-1β. PSCho/PS liposomes expanded Tregs, reducing Th1 and Th17 cells, while PSCho/PA liposomes were unable to dampen pro-inflammatory T cells and to promote immune-regulatory phenotype (Treg). The ability of PSCho/PS liposomes to up-regulate Treg cells was more pronounced in MS patients with high basal expression of M2 markers. PSCho/PS liposomes were more effective in decreasing Th1 (but not Th17) cells in MS patients with a disease duration >3 months. On the other hand, down-modulation of Th17 cells was evident in MS patients with active, Gadolinium enhancing lesions at MRI and in MS patients with a high basal expression of M1-associated markers in the monocytes. The same findings were observed for the modulation of MBP-driven Th1/Th17/Treg responses. These observations suggest that early MS associate to a hard-wired pro-Th1 phenotype of M1 that is lost later during disease course. On the other hand, acute inflammatory events reflect a temporary decrease of M2 phenotype that however is amenable to restauration upon treatment with PSCho/PS liposomes. Thus, together these data indicate that monocytes/macrophages may play an important regulatory function during MS course and suggest a role for PSCho/PS and PSCho/PS-MBP as new therapeutic tools to dampen the pro-inflammatory immune responses and to promote its regulatory branch., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests:Gabriele Di Sante reports financial support was provided by Fondazione Cassa di Risparmio di Perugia. Francesco Ria reports financial support was provided by Italian Multiple Sclerosis Association. Maurizio Fraziano reports financial support was provided by Italian Multiple Sclerosis Association. Francesco Ria reports financial support was provided by Università Cattolica del Sacro Cuore., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
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- 2023
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41. CSF CXCL13 and Chitinase 3-like-1 Levels Predict Disease Course in Relapsing Multiple Sclerosis.
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Lucchini M, De Arcangelis V, Piro G, Nociti V, Bianco A, De Fino C, Di Sante G, Ria F, Calabresi P, and Mirabella M
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- Humans, Biomarkers cerebrospinal fluid, Disease Progression, Recurrence, Chemokine CXCL13 cerebrospinal fluid, Multiple Sclerosis diagnosis, Chitinase-3-Like Protein 1 cerebrospinal fluid
- Abstract
Several biomarkers from multiple sclerosis (MS) patients' biological fluids have been considered to support diagnosis, predict disease course, and evaluate treatment response. In this study, we assessed the CSF concentration of selected molecules implicated in the MS pathological process. To investigate the diagnostic and prognostic significance of CSF concentration of target candidate biomarkers in both relapsing (RMS, n = 107) and progressive (PMS, n = 18) MS patients and in other inflammatory (OIND, n = 10) and non-inflammatory (ONIND, n = 15) neurological disorders. We measured the CSF concentration of APRIL, BAFF, CHI3L1, CCL-2, CXCL-8, CXCL-10, CXCL-12, CXCL-13 through a Luminex Assay. MS patients were prospectively evaluated, and clinical and radiological activity were recorded. CHI3L1 and CXCL13 CSF levels were significantly higher in both MS groups compared to control groups, while CCL2, BAFF, and APRIL concentrations were lower in RMS patients compared to PMS and OIND. Considering RMS patients with a single demyelinating event, higher concentrations of CHI3L1, CXCL10, CXCL12, and CXCL13 were recorded in patients who converted to clinically defined MS(CDMS). RMS patients in the CXCL13 and CHI3L1 high concentration group had a significantly higher risk of relapse (HR 12.61 and 4.57), MRI activity (HR 7.04 and 2.46), and of any evidence of disease activity (HR 12.13 and 2.90) during follow-up. CSF CXCL13 and CHI3L1 levels represent very good prognostic biomarkers in RMS patients, and therefore can be helpful in the treatment choice. Higher CSF concentrations of neuro-inflammatory biomarkers were associated with a higher risk of conversion to CDMS in patients with a first clinical demyelinating event. Differential CSF BAFF and APRIL levels between RMS and PMS suggest a different modulation of B-cells pathways in the different phases of the disease., (© 2022. The Author(s).)
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- 2023
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42. Past and future of the molecular characterization of the T cell repertoire: Some highlights of eli sercarz’s contributions
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Di Sante, Gabriele, Tredicine, Maria, Rolla, S., Di Pino, Antonella, Ria, Francesco, Di Sante G. (ORCID:0000-0001-6608-3388), Tredicine M., Di Pino A., Ria F. (ORCID:0000-0002-8444-0307), Di Sante, Gabriele, Tredicine, Maria, Rolla, S., Di Pino, Antonella, Ria, Francesco, Di Sante G. (ORCID:0000-0001-6608-3388), Tredicine M., Di Pino A., and Ria F. (ORCID:0000-0002-8444-0307)
- Abstract
The contribution of Eli E. Sercarz to immunology and immunopathology has been remarkable and achieved many milestones in the understanding of the processes of the mechanisms fine-tuning immune responses. A part of his work was dedicated to the study of the deep complexity of the lymphocyte T cell repertoire and its importance during the physiologic development and disease, such as clonal heterogeneity of T cell responses. Starting from these studies, under his mentoring, we had the opportunity to implement the spectratyping method and apply it to human and experimental autoimmune diseases, obtaining intriguing results. The open question of this brief review is the possible role of this fine and complex technique, the immunoscope analysis, in the era of the big data and omics.
- Published
- 2020
43. Immune response at birth, long-term immune memory and 2 years follow-up after in-utero anti-HBV DNA immunization
- Author
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Fazio, VM, Ria, F, Franco, E, Rosati, P, Cannelli, G, Signori, E, Parrella, P, Zaratti, L, Iannace, E, Monego, G, Blogna, S, Fioretti, D, Iurescia, S, Filippetti, R, and Rinaldi, M
- Published
- 2004
- Full Text
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44. A patient-informed approach to predict iodinated-contrast media enhancement in the liver.
- Author
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Setiawan H, Chen C, Abadi E, Fu W, Marin D, Ria F, and Samei E
- Subjects
- Humans, Liver diagnostic imaging, Tomography, X-Ray Computed methods, Abdomen, Contrast Media, Liver Neoplasms diagnostic imaging
- Abstract
Objective: To devise a patient-informed time series model that predicts liver contrast enhancement, by integrating clinical data and pharmacokinetics models, and to assess its feasibility to improve enhancement consistency in contrast-enhanced liver CT scans., Methods: The study included 1577 Chest/Abdomen/Pelvis CT scans, with 70-30% training/validation-testing split. A Gaussian function was used to approximate the early arterial, late arterial, and the portal venous phases of the contrast perfusion curve of each patient using their respective bolus tracking and diagnostic scan data. Machine learning models were built to predict the Gaussian parameters of each patient using the patient attributes (weight, height, age, sex, BMI). Pearson's coefficient, mean absolute error, and root mean squared error were used to assess the prediction accuracy., Results: The integration of the pharmacokinetics model with a two-layered neural network achieved the highest prediction accuracy on the test data (R
2 = 0.61), significantly exceeding the performance of the pharmacokinetics model alone (R2 = 0.11). Applying the model demonstrated that adjusting the contrast administration directed by the model may reduce clinical enhancement inconsistency by up to 40 %., Conclusions: A new model using a Gaussian function and supervised machine learning can be used to build liver parenchyma contrast enhancement prediction model. The model can have utility in clinical settings to optimize and improve consistency in contrast-enhanced liver imaging., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)- Published
- 2022
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45. House dust mite allergy and shrimp allergy: a complex interaction
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Celi, G., primary, Brusca, I., additional, Scala, E., additional, Villalta, D., additional, Pastorello, E., additional, Farioli, L., additional, Cortellini, G., additional, Deleonardi, G., additional, Galati, P., additional, Losappio, L., additional, Manzotti, G., additional, Pirovano, B., additional, Muratore, L., additional, Murzilli, F., additional, Cucinelli, F., additional, Musarra, A., additional, Cilia, M., additional, Nucera, E., additional, Aruanno, A., additional, Ria, F., additional, Patria, M.F., additional, Varin, E., additional, Polillo, B.R., additional, Sargentini, V., additional, Quercia, O., additional, Uasuf, C.G., additional, Zampogna, S., additional, Carollo, M., additional, Graci, S., additional, and Asero, R., additional
- Published
- 2020
- Full Text
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46. Effect of Temperature and Biomass-Water Ratio to Yield and Product Characteristics of Hydrothermal Treatment of Biomass.
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Oktaviananda, Cyrilla, Rahmawati, Ria F., Prasetya, Agus, Purnomo, Chandra W., Yuliansyah, Ahmad T., and Cahyono, Rochim B.
- Subjects
HYDROTHERMAL synthesis ,BIOMASS conversion ,FOURIER transform infrared spectroscopy ,BIOCHAR ,FUNCTIONAL groups - Abstract
Hydrothemal treatment is a thermochemical process that converts biomass into a coal-like materials called hydrochar by applying elevated temperature to biomass in a suspension with water under saturated pressure for a certain time. With this conversion process, easy to handle fuel with well-defined properties can be created from biomass residues, even with high moisture content. In this research, the effects of temperature (200-330°C) and biomass to water ratio (5%-20%) at initial pressure of 1.0 MPa to hydrothermal treatment of biomass (in the form of sawdust) were examined. All samples were then characterized in terms of yield, proximate analysis, calorific value,and changes in functional groups by FTIR. Approximately 52-69% of the original material was recovered as hydrochar. The gross calorific value ranged from 5472-7032 cal/g compared 5180 cal/g in the raw material. Fixed carbon ranged from 26.035- 57.015 wt% compared with 26.269 wt% in the raw material. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
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47. Dose coefficients for organ dosimetry in tomosynthesis imaging of adults and pediatrics across diverse protocols.
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Sharma S, Kapadia A, Ria F, Segars WP, and Samei E
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- Adult, Child, Humans, Monte Carlo Method, Phantoms, Imaging, Prospective Studies, Radiation Dosage, Retrospective Studies, Pediatrics, Radiometry methods
- Abstract
Purpose: The gold-standard method for estimation of patient-specific organ doses in digital tomosynthesis (DT) requires protocol-specific Monte Carlo (MC) simulations of radiation transport in anatomically accurate computational phantoms. Although accurate, MC simulations are computationally expensive, leading to a turnaround time in the order of core hours for simulating a single exam. This limits their clinical utility. The purpose of this study is to overcome this limitation by utilizing patient- and protocol-specific MC simulations to develop a comprehensive database of air-kerma-normalized organ dose coefficients for a virtual population of adult and pediatric patient models over an expanded set of exam protocols in DT for retrospective and prospective estimation of radiation dose in clinical tomosynthesis., Materials and Methods: A clinically representative virtual population of 14 patient models was used, with pediatric models (M and F) at ages 1, 5, 10, and 15 and adult patient models (M and F) with body mass index (BMIs) at 10th, 50th, and 90th percentiles of the US population. A graphics processing unit (GPU)-based MC simulation framework was used to simulate organ doses in the patient models, incorporating the scanner-specific configuration of a clinical DT system (VolumeRad, GE Healthcare, Waukesha, WI, USA) and an expanded set of exam protocols, including 21 distinct acquisition techniques for imaging a variety of anatomical regions (head and neck, thorax, spine, abdomen, and knee). Organ dose coefficients (h
n ) were estimated by normalizing organ dose estimates to air kerma at 70 cm (X70cm ) from the source in the scout view. The corresponding coefficients for projection radiography were approximated using organ doses estimated for the scout view. The organ dose coefficients were further used to compute air-kerma-normalized patient-specific effective dose coefficients (Kn ) for all combinations of patients and protocols, and a comparative analysis examining the variation of radiation burden across sex, age, and exam protocols in DT, and with projection radiography was performed., Results: The database of organ dose coefficients (hn ) containing 294 distinct combinations of patients and exam protocols was developed and made publicly available. The values of Kn were observed to produce estimates of effective dose in agreement with prior studies and consistent with magnitudes expected for pediatric and adult patients across the different exam protocols, with head and neck regions exhibiting relatively lower and thorax and C-spine (apsc, apcs) regions relatively higher magnitudes. The ratios (r = Kn /Kn ,rad ) quantifying the differences air-kerma-normalized patient-specific effective doses between DT and projection radiography were centered around 1.0 for all exam protocols, with the exception of protocols covering the knee region (pawk, patk)., Conclusions: This study developed a database of organ dose coefficients for a virtual population of 14 adult and pediatric XCAT patient models over a set of 21 exam protocols in DT. Using empirical measurements of air kerma in the clinic, these organ dose coefficients enable practical retrospective and prospective patient-specific radiation dosimetry. The computation of air-kerma-normalized patient-specific effective doses further enables the comparison of radiation burden to the patient populations between protocols and between imaging modalities (e.g., DT and projection radiography), as presented in this study., (© 2022 American Association of Physicists in Medicine.)- Published
- 2022
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48. Recovering or Persisting: The Immunopathological Features of SARS-CoV-2 Infection in Children.
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Buonsenso D, Valentini P, De Rose C, Tredicine M, Pereyra Boza MDC, Camponeschi C, Morello R, Zampino G, Brooks AES, Rende M, Ria F, Sanguinetti M, Delogu G, Sali M, Di Sante G, and On Behalf Of The Gemelli-Pediatric Covid-Team
- Abstract
Background. The profile of cellular immunological responses of children across the spectrum of COVID-19, ranging from acute SARS-CoV-2 infection to full recovery or Long COVID, has not yet been fully investigated. Methods. We examined and compared cytokines in sera and cell subsets in peripheral blood mononuclear cells (B and regulatory T lymphocytes) collected from four distinct groups of children, distributed as follows: younger than 18 years of age with either acute SARS-CoV-2 infection (n = 49); fully recovered from COVID-19 (n = 32); with persistent symptoms (Long COVID, n = 51); and healthy controls (n = 9). Results. In the later stages after SARS-CoV-2 infection, the cohorts of children, both with recovered and persistent symptoms, showed skewed T and B subsets, with remarkable differences when compared with children at the onset of the infection and with controls. The frequencies of IgD+CD27− naïve B cells, IgD+IgM+ and CD27−IgM+CD38dim B cells were higher in children with recent infection than in those with an older history of disease (p < 0.0001 for all); similarly, the total and natural Tregs compartments were more represented in children at onset when compared with Long COVID (p < 0.0001 and p = 0.0005, respectively). Despite the heterogeneity, partially due to age, sex and infection incidence, the susceptibility of certain children to develop persistent symptoms after infection appeared to be associated with the imbalance of the adaptive immune response. Following up and comparing recovered versus Long COVID patients, we analyzed the role of circulating naïve and switched B and regulatory T lymphocytes in counteracting the evolution of the symptomatology emerged, finding an interesting correlation between the amount and ability to reconstitute the natural Tregs component with the persistence of symptoms (linear regression, p = 0.0026). Conclusions. In this study, we suggest that children affected by Long COVID may have a compromised ability to switch from the innate to the adaptive immune response, as supported by our data showing a contraction of naïve and switched B cell compartment and an unstable balance of regulatory T lymphocytes occurring in these children. However, further prospective immunological studies are needed to better clarify which factors (epigenetic, diet, environment, etc.) are involved in the impairment of the immunological mechanisms in the Long COVID patients., Competing Interests: The authors declare no conflict of interest.
- Published
- 2022
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49. Restricted T-Cell Repertoire in the Epicardial Adipose Tissue of Non-ST Segment Elevation Myocardial Infarction Patients.
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Pedicino D, Severino A, Di Sante G, De Rosa MC, Pirolli D, Vinci R, Pazzano V, Giglio AF, Trotta F, Russo G, Ruggio A, Pisano E, d'Aiello A, Canonico F, Ciampi P, Cianflone D, Cianfanelli L, Grimaldi MC, Filomia S, Luciani N, Glieca F, Bruno P, Massetti M, Ria F, Crea F, and Liuzzo G
- Subjects
- Adipose Tissue, Epitopes, HLA-A3 Antigen, Humans, Leukocytes, Mononuclear, Proteome, T-Lymphocytes, Acute Coronary Syndrome, Non-ST Elevated Myocardial Infarction
- Abstract
Aims: Human epicardial adipose tissue, a dynamic source of multiple bioactive factors, holds a close functional and anatomic relationship with the epicardial coronary arteries and communicates with the coronary artery wall through paracrine and vasocrine secretions. We explored the hypothesis that T-cell recruitment into epicardial adipose tissue (EAT) in patients with non-ST segment elevation myocardial infarction (NSTEMI) could be part of a specific antigen-driven response implicated in acute coronary syndrome onset and progression., Methods and Results: We enrolled 32 NSTEMI patients and 34 chronic coronary syndrome (CCS) patients undergoing coronary artery bypass grafting (CABG) and 12 mitral valve disease (MVD) patients undergoing surgery. We performed EAT proteome profiling on pooled specimens from three NSTEMI and three CCS patients. We performed T-cell receptor (TCR) spectratyping and CDR3 sequencing in EAT and peripheral blood mononuclear cells of 29 NSTEMI, 31 CCS, and 12 MVD patients. We then used computational modeling studies to predict interactions of the TCR beta chain variable region (TRBV) and explore sequence alignments. The EAT proteome profiling displayed a higher content of pro-inflammatory molecules (CD31, CHI3L1, CRP, EMPRINN, ENG, IL-17, IL-33, MMP-9, MPO, NGAL, RBP-4, RETN, VDB) in NSTEMI as compared to CCS ( P < 0.0001). CDR3-beta spectratyping showed a TRBV21 enrichment in EAT of NSTEMI (12/29 patients; 41%) as compared with CCS (1/31 patients; 3%) and MVD (none) (ANOVA for trend P < 0.001). Of note, 11/12 (92%) NSTEMI patients with TRBV21 perturbation were at their first manifestation of ACS. Four patients with the first event shared a distinctive TRBV21-CDR3 sequence of 178 bp length and 2/4 were carriers of the human leukocyte antigen (HLA)-A*03:01 allele. A 3D analysis predicted the most likely epitope able to bind HLA-A3*01 and interact with the TRBV21-CDR3 sequence of 178 bp length, while the alignment results were consistent with microbial DNA sequences., Conclusions: Our study revealed a unique immune signature of the epicardial adipose tissue, which led to a 3D modeling of the TCRBV/peptide/HLA-A3 complex, in acute coronary syndrome patients at their first event, paving the way for epitope-driven therapeutic strategies., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Pedicino, Severino, Di Sante, De Rosa, Pirolli, Vinci, Pazzano, Giglio, Trotta, Russo, Ruggio, Pisano, d’Aiello, Canonico, Ciampi, Cianflone, Cianfanelli, Grimaldi, Filomia, Luciani, Glieca, Bruno, Massetti, Ria, Crea and Liuzzo.)
- Published
- 2022
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50. House dust mite allergy and shrimp allergy: a complex interaction
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Celi, G, Brusca, I, Scala, E, Villalta, D, Pastorello, E, Farioli, L, Cortellini, G, Deleonardi, G, Galati, P, Losappio, L, Manzotti, G, Pirovano, B, Muratore, L, Murzilli, F, Cucinelli, F, Musarra, Teresa, Cilia, M, Nucera, Eleonora, Aruanno, A, Ria, Francesco, Patria, M F, Varin, E, Polillo, B R, Sargentini, V, Quercia, O, Uasuf, C G, Zampogna, S, Carollo, M, Graci, S, Asero, R, Musarra, A, Nucera, E (ORCID:0000-0002-0565-7680), Ria, F (ORCID:0000-0002-8444-0307), Celi, G, Brusca, I, Scala, E, Villalta, D, Pastorello, E, Farioli, L, Cortellini, G, Deleonardi, G, Galati, P, Losappio, L, Manzotti, G, Pirovano, B, Muratore, L, Murzilli, F, Cucinelli, F, Musarra, Teresa, Cilia, M, Nucera, Eleonora, Aruanno, A, Ria, Francesco, Patria, M F, Varin, E, Polillo, B R, Sargentini, V, Quercia, O, Uasuf, C G, Zampogna, S, Carollo, M, Graci, S, Asero, R, Musarra, A, Nucera, E (ORCID:0000-0002-0565-7680), and Ria, F (ORCID:0000-0002-8444-0307)
- Abstract
Summary:Background and Objective. Sensitization and allergy to shrimp among Italian house dust mite allergic patients are not well defined and were investigated in a large multicenter study. Methods. Shrimp sensitization and allergy were assessed in 526 house dust mite (HDM)-allergic patients submitted to the detection of IgE to Der p 10 and 100 atopic control not sensitized to HDM. Results. Shrimp allergy occurred in 9% of patients (vs 0% of 100 atopic controls not sensitized to HDM; p minor 0.001). Shrimp-allergic patients were less frequently hypersensitive to airborne allergens other than HDM than crustacean-tolerant subjects (35% vs 58.8%; p minor 0.005). Only 51% of tropomyosin-sensitized patients had shrimp allergy, and these showed significantly higher Der p 10 IgE levels than shrimp-tolerant ones (mean 22.2 KU/l vs 6.2 KU/l; p minor 0.05). Altogether 53% of shrimp-allergic patients did not react against tropomyosin. Conclusions. Shrimp allergy seems to occur uniquely in association with hypersensitivity to HDM allergens and tropomyosin is the main shrimp allergen but not a major one, at least in Italy. Along with tropomyosin-specific IgE levels, monosensitization to HDM seems to represent a risk factor for the development of shrimp allergy among HDM allergic patients.
- Published
- 2019
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